You are on page 1of 30

.

1
75% .

.


70


.
90
,
. in vitro
( , )
.

Acetanilide, Acetylsalicylic acid, Amphetamine, Chloral hydrate, Cisplatin, Clonidine,
Cromoglycate, Cyclosporin, Dicoumarol, Diethylstilbestrol, Haloperidol, Heparin, Imipramine,
Iproniazid, Isoniazid, Levamisole, Lithium carbonate, Lysergide (LSD), Nitroglycerine,
Penicilli, Sulfonamides, Tamoxifen,Urethane, Valproic acid, Warfarin.

2000 -


, ,
, .

.
, ,
, High throughput
screening (HTS)
.
,
, .



,
Lipinski (Pfizer) Rule of Five: MW < 500,
log P < 5, H < 5, H < 10

(. )


/

.
3D

.
.
,
a leading compounds. a
, , ,
.,
.

!!!

, ,
,

:
me too me better,me faster,me first me only.

,
:

-
hits- HTS
Leading compound
-

-

.
,
, .



.
(leading compound)
, ,

DNA
,

HTS (High Throughput Screening)



3D ()
( ).


,
HTS (High Throughput Screening)

:
4

-

-
in vitro
, in vivo.
.
.


Ligand based drug design (LBDD)


Structure based drug design (SBDD)

3D ,

,
(high-throughput screening, HTS )

3D ,

3D ,

de novo
( )

3D ,

High Throughput Screening (HTS) ( )


.


.
.
, .

. ,

. 3D
- NMR,

.


.
5

( )
.
in-house .
.
HTS
.

:
- ,

.
- -

o .
, .
96 ,
, LC/MS( Liquid
Chromatography/ Mass Spectrometry).
High Throughput Screening (HTS)
(100 M) (100 M, 10 M 1 M)

.

.


.
.

.
.
.

(the hits),
.
( n ) -
.
5%
.
from hit to lead. ,

HTS.
(DMPK drug metabolism and
pharmacokinetics)
6


. ,
,
,


.
HTS
-

HTS, ,
HTS .
. Hit
,
( ).

,
.
,

.
,
.
,
, ,

.
?
.

7

. HTS , .
.


( Leading compounds)

SAR


( 5,000 10,000 US-$ )

:
(=), , ADME ,
.
o

.
.

, ,
.

,

68 10 (R1 - R10 5,
10, 10, 4, 2, 5, 5, 2, 5, 20 ) 20
. (*)
80 .


?
10 , 100 000
. :
8

Screen smarter, not faster.


,
,
,
Leading compound. QSAR (Quantitative Structure Activity
Relationship)
SAR (Structure Activity Relationship)
,

.
QSAR ?
QSAR (quantitative structure-activity relationships) ,
(
) (Free Wilson analysis),
- (Hansch analysis), (3D QSAR).
QSAR (Hansch- Free Wilson- )
2D . .
3D-QSAR . 3D
3D- ,
.
QSAR
-
-
-
-
-
-
2D QSAR

(SAR) .
Crum-Brown Fraser
: , , ,
,
QSAR :
BR= f(C)
9

BR-
C-

- :
, ,
.
Log (BR) = a ( )+c
Log (BR) = ( )
=
= Y ()
,
, :
-


,

, .
- QSAR
:
-

,
in vitro .

19 Mayer Overton


10

.
Hammett- - ( -
.
Taft -
Es. 1939 Ferguson

:
Ci=kAim
Ci-
Ai -
k.m- .
60-
QSAR. 1964 Hansch- LEF (linear free energy),
Free-Wilson- .

- ,

.

Hansch-
:
--

-
,
:
-

Es

(
) - QSAR
,

.

11

.
-

,
,

logPx - logPh
x-
P-n-/
P

.
,
.
,

. .
,
- :
CF3> CH3;

SCF3>SCF3; OCF3> OCH3

( ),
.

- .
(-COOH, -NO2) ( )
, (-OH, -OCH3, -NH2, CH3) .

Es

.

) Es
:
Log (1/C) = -a b

c Es +d

Log (1/C)-
C-

12

-
-

Es-Taft-
a, b, c, d-
,
Hansch Fujita
,
. ,
.
-
.
:
d ( )/dt = A x C x Kx
A-
-
-
,
logP ( ) n/()
logP= logCo/logCw
Co- (n-)
Cw-


logPx-logPh

Px-
Ph-
Po ,
Gauss-
, :
13

A=f ( ) = a x e-(

)2/b

d( )/dt=A x C x Kx
:
d ( ) / dt= a x e-

)2/b

x C x Kx


d( )/dt .
:
Log (1/C) = -k

+ k

- k

+ log kx + k

( )

logKx / Kh=

Log (1/C) = -k

+ k

- k

+ k

,
, :
Log (1/C) = -k

+ k +

+ k

,
log(1/C) logP .
,
:

Log (1/C) = a + b
log P

logP,
logP ,
,
logP.
.

,
.

14

log(1/C) logP.
1.
,
,
,
,
.
2.
,

.

(Po).
- .
log(1/C) logP, .

Log biologic response versus log partition coefficient usina linear. oarabolic. and
bilinear models.

-
-


15

- .


R=NO2
.
,
.
- ( NO2= +0,71)
( NO2=+0,06) .
Free-Wilson- ( )-1964
QSAR 1
0 .
,
..

.
Fujita Ban, .

.
Log1/C= aij +

16

ai,j- I j
.
Free-Wilson- ,
QSAR ,
- .

a) Free Wilson
+ ,
+
+ Hansch-
-
- ,
- QSAR ,

-
b) Hansch-
+ -
+

+
-
-
- 2D
-
-
- -
- - .
- 3D QSAR
e 3D QSAR

HTS

.
. ,


.

,
-
,

17

.
.



.

.

18

-
(
leading compound) (
).
. HTS
100 000 database
.
virtual screening (
) :
-

2D

- pharmacophore

3D : molecular docking.

2D .

, HTS drug like
.
,
.
3D
.

.
virtual screening.
19


,
, (
logP) (
).
database.
, .
.
,
2D
. ,

drug-like
.
-

3D

. Toa


( ) .

,

.

.

: , ,
.
2 5. ,
( ) 9-11
( ).

.
. 3D
,

.

20

3D
.

hits. hits,
.
,
.
- .

.
( )
.
.
3D , 3D
.
-
.
.
-
HTS .
2D 3D


.
(.
)
,
.
,
21


.
.
(,
..) . 3D
PDB
(protein data bank) .

PDB file ATPO GluR2

PDB 3D
docking



pKa
His:

C,O N
: his, thr, asn, gln

22

K :

, . 15 .
2D 3D
.
docking:

-


pH

( , log P,
, , )

non-drug :
<200 >600, logP>7,
>8 >8.

2D

3D :
-


.

.

.

. "active analog approach".

. box grid
10
.

23

.


grid . van der Waals
,

.
.



. 105 106

.
. 3D


.
3D
. 10 ,


.
.
24

-
, , ,
,
.


. ,

.
GluR2-ATPO ()

ATPO-GluR2
3D

.

25

Phenylalanine-ATPO
GluR -


ATPO 100
4,5 6.
. GluR2
EL-7.
EL-7
HOOC

COOH

H2N

Cl

NO2

EL-7 GluR2
ATPO



.
.
26


ATP.

.

2,52 .
docking, EL-7
.

EL-7
GluR2

EL-7 GluR2


X-ray.
EL-7 GluR2 :

1)

2)

27


:
-
.

docking :
hits
? HTS ,

.
docking (1-10% )
hits . virtual screening
HTS,
. (
drug-like

).

?
- (in
vacuo)
-
-
-
3D QSAR
+ 3D
+
+ , ,
+ 3D
-
-
-
- in vitro
3D QSAR-
HTS

.

28

600-1500
.
: / ,
(GPCRs,
, , , , .)
: (
)
: ,
().

29

: GPCRs, , ,, ,
/ , , .
90%
9 22 22-
bcr-abl .
.

STI 571 (Imatinib, Glivec, Novartis)

PKC-protein kinase C
Imatinib

30

You might also like