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1
75% .
.
70
.
90
,
. in vitro
( , )
.
Acetanilide, Acetylsalicylic acid, Amphetamine, Chloral hydrate, Cisplatin, Clonidine,
Cromoglycate, Cyclosporin, Dicoumarol, Diethylstilbestrol, Haloperidol, Heparin, Imipramine,
Iproniazid, Isoniazid, Levamisole, Lithium carbonate, Lysergide (LSD), Nitroglycerine,
Penicilli, Sulfonamides, Tamoxifen,Urethane, Valproic acid, Warfarin.
2000 -
, ,
, .
.
, ,
, High throughput
screening (HTS)
.
,
, .
,
Lipinski (Pfizer) Rule of Five: MW < 500,
log P < 5, H < 5, H < 10
(. )
/
.
3D
.
.
,
a leading compounds. a
, , ,
.,
.
!!!
, ,
,
:
me too me better,me faster,me first me only.
,
:
-
hits- HTS
Leading compound
-
-
.
,
, .
.
(leading compound)
, ,
DNA
,
HTS (High Throughput Screening)
3D ()
( ).
,
HTS (High Throughput Screening)
:
4
-
-
in vitro
, in vivo.
.
.
Ligand based drug design (LBDD)
Structure based drug design (SBDD)
3D ,
,
(high-throughput screening, HTS )
3D ,
3D ,
de novo
( )
3D ,
( )
.
in-house .
.
HTS
.
:
- ,
.
- -
o .
, .
96 ,
, LC/MS( Liquid
Chromatography/ Mass Spectrometry).
High Throughput Screening (HTS)
(100 M) (100 M, 10 M 1 M)
.
.
.
.
.
.
.
(the hits),
.
( n ) -
.
5%
.
from hit to lead. ,
HTS.
(DMPK drug metabolism and
pharmacokinetics)
6
. ,
,
,
.
HTS
-
HTS, ,
HTS .
. Hit
,
( ).
,
.
,
.
,
.
,
, ,
.
?
.
7
. HTS , .
.
( Leading compounds)
SAR
( 5,000 10,000 US-$ )
:
(=), , ADME ,
.
o
.
.
, ,
.
,
68 10 (R1 - R10 5,
10, 10, 4, 2, 5, 5, 2, 5, 20 ) 20
. (*)
80 .
?
10 , 100 000
. :
8
BR-
C-
- :
, ,
.
Log (BR) = a ( )+c
Log (BR) = ( )
=
= Y ()
,
, :
-
,
, .
- QSAR
:
-
,
in vitro .
19 Mayer Overton
10
.
Hammett- - ( -
.
Taft -
Es. 1939 Ferguson
:
Ci=kAim
Ci-
Ai -
k.m- .
60-
QSAR. 1964 Hansch- LEF (linear free energy),
Free-Wilson- .
- ,
.
Hansch-
:
--
-
,
:
-
Es
(
) - QSAR
,
.
11
.
-
,
,
logPx - logPh
x-
P-n-/
P
.
,
.
,
. .
,
- :
CF3> CH3;
( ),
.
- .
(-COOH, -NO2) ( )
, (-OH, -OCH3, -NH2, CH3) .
Es
.
) Es
:
Log (1/C) = -a b
c Es +d
Log (1/C)-
C-
12
-
-
Es-Taft-
a, b, c, d-
,
Hansch Fujita
,
. ,
.
-
.
:
d ( )/dt = A x C x Kx
A-
-
-
,
logP ( ) n/()
logP= logCo/logCw
Co- (n-)
Cw-
logPx-logPh
Px-
Ph-
Po ,
Gauss-
, :
13
A=f ( ) = a x e-(
)2/b
d( )/dt=A x C x Kx
:
d ( ) / dt= a x e-
)2/b
x C x Kx
d( )/dt .
:
Log (1/C) = -k
+ k
- k
+ log kx + k
( )
logKx / Kh=
Log (1/C) = -k
+ k
- k
+ k
,
, :
Log (1/C) = -k
+ k +
+ k
,
log(1/C) logP .
,
:
Log (1/C) = a + b
log P
logP,
logP ,
,
logP.
.
,
.
14
log(1/C) logP.
1.
,
,
,
,
.
2.
,
.
(Po).
- .
log(1/C) logP, .
Log biologic response versus log partition coefficient usina linear. oarabolic. and
bilinear models.
-
-
15
- .
R=NO2
.
,
.
- ( NO2= +0,71)
( NO2=+0,06) .
Free-Wilson- ( )-1964
QSAR 1
0 .
,
..
.
Fujita Ban, .
.
Log1/C= aij +
16
ai,j- I j
.
Free-Wilson- ,
QSAR ,
- .
a) Free Wilson
+ ,
+
+ Hansch-
-
- ,
- QSAR ,
-
b) Hansch-
+ -
+
+
-
-
- 2D
-
-
- -
- - .
- 3D QSAR
e 3D QSAR
HTS
.
. ,
.
,
-
,
17
.
.
.
.
18
-
(
leading compound) (
).
. HTS
100 000 database
.
virtual screening (
) :
-
2D
- pharmacophore
3D : molecular docking.
2D .
, HTS drug like
.
,
.
3D
.
.
virtual screening.
19
,
, (
logP) (
).
database.
, .
.
,
2D
. ,
drug-like
.
-
3D
. Toa
( ) .
,
.
.
: , ,
.
2 5. ,
( ) 9-11
( ).
.
. 3D
,
.
20
3D
.
hits. hits,
.
,
.
- .
.
( )
.
.
3D , 3D
.
-
.
.
-
HTS .
2D 3D
.
(.
)
,
.
,
21
.
.
(,
..) . 3D
PDB
(protein data bank) .
PDB 3D
docking
pKa
His:
C,O N
: his, thr, asn, gln
22
K :
, . 15 .
2D 3D
.
docking:
-
pH
( , log P,
, , )
non-drug :
<200 >600, logP>7,
>8 >8.
2D
3D :
-
.
.
.
. "active analog approach".
. box grid
10
.
23
.
grid . van der Waals
,
.
.
. 105 106
.
. 3D
.
3D
. 10 ,
.
.
24
-
, , ,
,
.
. ,
.
GluR2-ATPO ()
ATPO-GluR2
3D
.
25
Phenylalanine-ATPO
GluR -
ATPO 100
4,5 6.
. GluR2
EL-7.
EL-7
HOOC
COOH
H2N
Cl
NO2
EL-7 GluR2
ATPO
.
.
26
ATP.
.
2,52 .
docking, EL-7
.
EL-7
GluR2
EL-7 GluR2
X-ray.
EL-7 GluR2 :
1)
2)
27
:
-
.
docking :
hits
? HTS ,
.
docking (1-10% )
hits . virtual screening
HTS,
. (
drug-like
).
?
- (in
vacuo)
-
-
-
3D QSAR
+ 3D
+
+ , ,
+ 3D
-
-
-
- in vitro
3D QSAR-
HTS
.
28
600-1500
.
: / ,
(GPCRs,
, , , , .)
: (
)
: ,
().
29
: GPCRs, , ,, ,
/ , , .
90%
9 22 22-
bcr-abl .
.
PKC-protein kinase C
Imatinib
30