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Table Of Contents

Welcome to the PAST!
Installation
The spreadsheet and the Edit menu
Entering data
Selecting areas
Moving a row or a column
Renaming rows and columns
Increasing the size of the array
Cut, copy, paste
Remove
Row colors and symbols
Selecting datatypes for columns, and specifying groups
Remove uninformative rows/columns
Transpose
Grouped columns to multivar
Grouped rows to multivar
Observations to contingency table
Stack grouped rows into columns
Samples to events (UA to RASC)
Events to samples (RASC to UA)
Loading and saving data
Importing data from Excel
Reading and writing Nexus files
Importing text files
Counter
Transform menu
Logarithm
Subtract mean
Remove trend
Box-Cox
Row percentage
Row normalize length
Abundance to presence/absence
Procrustes fitting
Bookstein fitting
Project to tangent space
Remove size from landmarks
Transform landmarks
Remove size from distances
Sort ascending and descending
Regular interpolation
Evaluate expression
Plot menu
Graph
XY graph
XY graph with error bars
Histogram
Bar chart/box plot
Percentiles
Normal probability plot
Ternary
Bubble plot
Matrix
Surface
Statistics menu
Univariate
Two-sample tests
t test and related tests for equal means
F test for equal variances
Mann-Whitney test for equal medians
Kolmogorov-Smirnov test for equal distributions
Coefficient of variation (Fligner-Kileen test)
Two-sample paired tests (t, sign, Wilcoxon)
Several-sample tests
One-way ANOVA
Kruskal-Wallis
Several-samples repeated measures tests
Tukey’s pairwise post-hoc tests
Friedman test
Two-way ANOVA
Two-way ANOVA without replication
One-way ANCOVA
Correlation table
Intraclass correlation
Normality tests
Contingency table (chi2 etc.)
Risk/odds
Survival analysis (Kaplan-Meier curves, log-rank test etc.)
Combine errors
Multivar menu
Principal components
Correspondence analysis
Detrended correspondence analysis
Canonical correspondence
Seriation
CABFAC factor analysis, NOT YET IN PAST 3
Discriminant analysis
Two-block PLS
Cluster analysis
Neighbour joining
K-means clustering
Multivariate normality
Box’s M
MANOVA
One-way ANOSIM
One-way PERMANOVA
Two-way ANOSIM
Two-way PERMANOVA
Mantel test and partial Mantel test
SIMPER
Paired Hotelling
Modern Analog Technique
Similarity and distance indices
Genetic sequence stats
Model menu
Linear, bivariate
Linear, multiple (one dependent, n independent)
Linear, multivariate multiple (m independent, n dependent)
Generalized Linear Model
Polynomial regression
Nonlinear
Linear
Quadratic
Power
Exponential
Von Bertalanffy
Michaelis-Menten
Logistic
Gompertz
Sinusoidal regression
Smoothing spline
LOESS smoothing
Mixture analysis
Abundance models NOT YET IN PAST 3
Species packing (Gaussian) NOT YET IN PAST 3
Logarithmic spiral
Diversity menu
Diversity indices
Beta diversity
Taxonomic distinctness
Individual rarefaction
Sample rarefaction (Mao’s tau)
SHE analysis
Diversity permutation test
Diversity t test
Diversity profiles
Time series menu
Simple periodogram
REDFIT spectral analysis
Multitaper spectral analysis
Walsh transform
Short-time Fourier transform
Wavelet transform
Autocorrelation
Autoassociation
Cross-correlation
Mantel correlogram (and periodogram)
Runs test
ARMA (and intervention analysis) NOT YET IN PAST 3
Insolation (solar forcing) model NOT YET IN PAST 3
Point events
Markov chain
Simple smoothers
FIR filter
Date/time conversion
Geometrical menu
Directions (one sample)
Spherical (one sample)
Point pattern analysis - nearest neighbours
Ripley’s K point pattern analysis
Kernel density
Point alignments
Spatial autocorrelation (Moran’s I)
Gridding (spatial interpolation)
Multivariate allometry NOT YET IN PAST 3
PCA of 2D landmarks (relative warps)
Thin-plate splines for 2D landmarks
Size from landmarks (2D or 3D) NOT YET IN PAST 3
Distance from landmarks (2D or 3D) NOT YET IN PAST 3
All distances from landmarks (EDMA) NOT YET IN PAST 3
Landmark linking NOT YET IN PAST 3
Fourier shape (2D) NOT YET IN PAST 3
Elliptic Fourier shape analysis NOT YET IN PAST 3
Hangle Fourier shape analysis NOT YET IN PAST 3
Eigenshape analysis NOT YET IN PAST 3
Constrained optimization (CONOP)
Appearance Event Ordination NOT YET IN PAST 3
Distribution-free range confidence intervals NOT YET IN PAST 3
Spindle diagram NOT YET IN PAST 3
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Past 3 Manual

Past 3 Manual

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Published by: jalbgomez on Mar 08, 2014
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09/28/2014

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