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Abstract
A Clostridium butyricum strain, isolated from hydrogen-producing sewage sludge, was examined for its ability to produce
H2 from sucrose-based medium under different medium composition, pH, and carbon substrate concentration. The strain,
designated as C. butyricum CGS5, grew and produced hydrogen efficiently on iron-containing medium. Hydrogen started
to evolve when cell growth entered mid-exponential phase and reached maximum production rate at the stationary phase.
The optimal hydrogen production (5.3 l) and hydrogen yield (2.78 mol H2 /mol sucrose) were obtained at an initial sucrose
concentration of 20 g COD/l (17.8 g/l) and a pH of 5.5. However, the CGS5 strain attained its highest hydrogen production
rate (209 ml/h/l) under a medium pH of 6.0. In comparison with pH 5.5, operation at pH 6.0 and 6.5 obtained higher cell
growth rate and cell yield, but resulted in lower total hydrogen production and hydrogen yield. This is most likely due to
rapid conversion of the carbon source into biomass, reducing the formation of hydrogen. Neither hydrogen production nor cell
growth was detected when the strain was cultivated at pH 5.0. A sucrose concentration of 20 g COD/l gave the best hydrogen
fermentation performance, whereas cell growth rate and hydrogen production rate both decreased when sucrose concentration
was elevated to 30 g COD/l, suggesting that substrate inhibition may occur.
䉷 2004 International Association for Hydrogen Energy. Published by Elsevier Ltd. All rights reserved.
Keywords: Biohydrogen; Clostridium butyricum; Strain isolation
0360-3199/$30.00 䉷 2004 International Association for Hydrogen Energy. Published by Elsevier Ltd. All rights reserved.
doi:10.1016/j.ijhydene.2004.09.008
1064 W.-M. Chen et al. / International Journal of Hydrogen Energy 30 (2005) 1063 – 1070
amounts of dissolved oxygen. In order to grow Clostridium and designated as CGS1, CGS2, CGS3, CGS4, CGS5 and
sp. for hydrogen production, addition of expensive reduc- CGS6.
ing agents (such as L-cysteine) may be required, reducing
the feasibility in practical applications. Therefore, some re- 2.2. Morphological and biochemical test
searchers have utilized a mixed culture of Enterobacter sp.
and Clostridium sp. to produce hydrogen under a reducing- Morphological examination was observed by a light
agent-free culture medium and thereby lowering the cost of microscope (Zeiss Axioskop). Biochemical identification
H2 production with Clostridium sp. alone [9]. However, be- presented in the Rapid ANA II microtests was determined
cause Clostridium sp. (e.g., Clostridium butyricum) is fre- by Electronic Code Compendium software version VB.
quently found in hydrogen-producing bacterial consortia and 1.3.97 according to the recommendation of the manufac-
is also very effective in producing H2 from organic sub- turer (Remel).
strates (esp. carbohydrates), it is still of great value to re-
veal hydrogen production characteristics of Clostridium sp. 2.3. 16S rDNA sequencing and phylogenetic analysis
in order to maintain or improve hydrogen production per-
formance of a mixed-culture system. Amplification and sequence analysis of the 16S rRNA
In this work, we isolated hydrogen-producing anaerobes gene was performed as described previously [15]. The se-
(identified as Clostridium butyricum strains) from accli- quence was compared with others available in GenBank
mated sewage sludge that is very efficient in H2 produc- and Ribosomal Database Project II. The multiple-sequence
tion [10–14]. The pure isolates were cultivated on a less alignment including six hydrogen-producing strains and
expensive culture medium for hydrogen production. Effects their closest relatives were performed using the BioEdit pro-
of pH control and carbon substrate concentration on hydro- gram [16]. The phylogenetic reconstruction was inferred by
gen production performance were investigated to identify using the neighbor-joining, UPGMA, maximum-likelihood
the proper conditions for H2 production with the pure iso- and Fitch-Margoliash methods in the BioEdit software
late. The dynamic relationship among cell growth, hydro- [16]. A bootstrap analysis (confidence values estimated
gen evolution and metabolite production was closely mon- from 1000 replications of each sequence) was performed
itored and discussed. Characterization of H2 fermentation for the neighbor-joining analysis using the CLUSTAL w
features of the isolate is the initial step towards feasibility 1.7 program [17]. A phylogenetic tree was drawn using
assessment of using the domestic hydrogen-producing iso- the TREEVIEW program [18]. Sequence identities were
lates for bioaugmentation of anaerobic hydrogen-producing calculated using the BioEdit program [16].
processes.
2.4. Nucleotide sequence accession numbers
2. Materials and methods The 16S rDNA sequence reported in this paper has
been deposited in the NCBI nucleotide sequence databases
2.1. Isolation of the bacterial strains and growth conditions under accession number as follows: AY540105 (CGS1),
AY540106 (CGS2), AY540107 (CGS3), AY540108 (CGS4),
Hydrogen-producing bacterial strains were isolated from AY540109 (CGS5) and AY54010 (CGS6).
effluent sludge of five anaerobic hydrogen-producing biore-
actors including CSTR, fixed bed, fluidized bed, and a 2.5. Selection of fermentation medium for hydrogen
novel granular sludge bed reactor capable of producing up production
to 7.3 l/h/l of H2 from sucrose-based synthetic wastewater
[10–14]. The sludge was pretreated at 80 ◦ C for 30 min, The isolates were pre-cultured on CH medium and
diluted with sterile distilled water, and then spread onto the early-stationary-phase culture was transferred to three
CH agar plates incubated under anaerobic condition using oxygen-free 250-ml serum vials containing 200 ml of three
Anaerobic Jar HP11 with Gas Generating Kit BR38 (Ox- different media (PM, DM, and DMI) to undergo batch hy-
oid). The composition of CH medium was (l−1 ): sucrose, drogen fermentation. The PM medium, which is deficient in
15 g; yeast extract, 1 g; Na2 HPO4 , 5 g; KH2 PO4 , 1 g; NaCl, trace elements, consisted of (g/l) sucrose, 17.8; Na2 HPO4 ,
1 g; MgSO4 · 7H2 O, 0.1 g; FeSO4 , 0.025 g; and 2.0 ml of 5; KH2 PO4 , 1; NaCl, 2; MgSO4 , 0.1; (NH4 )2 SO4 , 3; agar,
trace element solution. The trace element solution contained 2; Na2 S · 9H2 O, 0.5; resazurin, 001. The DM medium
(g/l) H3 BO3 , 2.86; MnSO4 · 4H2 O, 2.03; 0.08; FeCl3 , 0.1. comprised (g/l) sucrose, 17.8; NH4 HCO3 , 5.240; NaHCO3 ,
The incubation temperature was controlled at 37 ◦ C and the 6.72; K2 HPO4 , 0.125; MgCl2 · 6H2 O, 0.1; MnSO4 · 6H2 O,
pH of the medium was adjusted initially to 7.5. The CH 0.015; Na2 S · 9H2 O, 0.5; resazurin, 001; agar, 2. The DMI
agar plates were prepared by adding 2.0% (w/v) agar to medium is an iron-amended version of DM medium (i.e.,
the CH media. Single colonies obtained on CH agar plates DM medium plus 0.01 g/l of FeSO4 · 7H2 O). The initial
were re-streaked more than three times to ensure the purity pH of the medium was 7.5 and the temperature for batch
of the strains. Six strains from pure cultures were obtained growth was kept at 37 ◦ C. The cell concentration, pH, and
W.-M. Chen et al. / International Journal of Hydrogen Energy 30 (2005) 1063 – 1070 1065
biogas production were monitored during the course of the genus Clostridium. The nearly full-length sequences of 16S
experiments. rRNA gene (1434 bp) were also determined for the six iso-
lates. Based on the sequence identity of 16S rDNA, CGS1,
2.6. Hydrogen production in batch fermentors CGS2, CGS3, CGS4 and CGS6 resemble to each other with
a 100–99.7% identity, while the sequence of CGS5 is less
Thirty milliliters of the pre-culture (on DMI medium) similar to that of the rest (99.0% identity). The highest sim-
of C. butyricum CGS5 was inoculated into a 5-l fermen- ilarity values of six strains were obtained towards C. bu-
tor (Model MDL6C, Mazubishi Inc.; Tokyo, Japan), con- tyricum ATCC 19398T (99.5–99.3% identity). The similarity
taining 1.7 and 2.5 l of agar-free DMI medium, respec- levels towards other Clostridium species were below 97.4%.
tively, for the runs with and without pH control. For the The 16S rDNA phylogenic tree was constructed for the
experiments investigating the effect of pH, the pH value six hydrogen-producing strains and those of the described
was controlled at 6.5, 6.0, 5.5, and 5.0 by automatic addi- Clostridium species were shown in Fig. 1. According to the
tion of 3 N NaOH. The initial sucrose concentration in the results of physiological and 16S rDNA sequence examina-
medium was 17.8 g/l (20 g COD/l). In the other set of ex- tions, the strains should belong to C. butyricum. Preliminary
periments, the pH was controlled at 6.5, while the initial batch tests show that the CGS5 strain possessed superior hy-
sucrose concentration varied from 5 to 30 g COD/l. In all drogen production activity over the other five C. butyricum
cases, the hydrogen fermentation was conducted at a con- isolates (data not shown) and thus CGS5 strain was selected
stant temperature of 37 ◦ C. Cell concentration, pH, carbo- for detailed hydrogen fermentation studies in the rest of this
hydrate concentration, and production of biogas and sol- work.
uble metabolites were determined with respect to culture
time.
3.2. Effect of medium composition on hydrogen production
2.7. Analytical methods
To select for suitable medium composition for hydrogen
The gas products (mainly H2 and CO2 ) were analyzed fermentation, C. butyricum CGS5 was grown on three me-
by gas chromatography (GC) using a thermal conductiv- dia with different compositions. The liquid media did not
ity detector. The carrier gas used was argon and the col- contain expensive reducing agents, but was instead supple-
umn (0.53 mm in inner diameter and 15 m in height) was mented with a dilute concentration of agar (2 g/l) to create
packed with Porapak Q. The temperature at the capillary local anaerobic environment in the culture medium. The re-
column was initially 50 ◦ C and was increased to 200 ◦ C at a sults (Table 1) show that C. butyricum CGS5 grew well on
rate of 30 ◦ C/min. The temperature at injection was 140 ◦ C. all of the three media. Among them, DMI medium enabled
The volatile fatty acids and ethanol were also detected by more efficient cell growth with a growth rate of 0.77 h−1 and
GC using a flame ionization detector. The temperatures at a final concentration of 0.81 g dry cell/l, whereas the strain
glass column and injection were 145 and 175 ◦ C, respec- grew slower on DM and PM medium (both at ca. 0.48 h−1 )
tively. The carrier gas was N2 and the packing material was and also reached a lower cell concentration (0.5–0.6 g dry
FON (contains polyethylene glycol and 2-nitroterephthalic cell/l). As for hydrogen production, the iron-enriched DMI
acid) obtained from Shimadzu Inc. (Tokyo, Japan). Standard medium was also more favorable with a total H2 production
Methods (APHA, 1995) were used to determine biomass (VH2 ) of 95 ml, in contrast to a poor hydrogen production for
concentration (in terms of volatile suspended solid; VSS) of Fe2+ -excluding DM and MP medium (VH2 = 18 and 5 ml,
samples taken separately from granular sludge portion and respectively) (Table 1). Apparently, supplement of Fe2+ is
suspended-cell portion in the reactor. The carbohydrate con- extremely crucial to hydrogen production activity of the C.
centration in the effluent was also measured according to butyricum CGS5 strain. This is quite reasonable because
Standard Methods [19]. Fe2+ is considered an important cofactor of hydrogenase
responsible for hydrogen production in acidogenic bacteria,
such as C. butyricum [20–22]. An iron-carrying complex,
3. Results and discussion ferrodoxin, is known to mediate electron transfer of reduc-
ing power en route to hydrogenase-catalyzed hydrogen pro-
3.1. Characterization of the hydrogen-producing isolates duction [22,23]. In addition, Table 1 shows that fermentation
with DM medium, a modified version of a medium proposed
Six strains capable of producing hydrogen were isolated for methane fermentation [24], attained better hydrogen pro-
from the anaerobic sludge sources. The isolates only grew duction efficiency than with PM medium. It is likely that
under strict anaerobic conditions. Microscopic examination supplementation of trace element (Mn2+ ) and bicarbonate
showed that they were in rod shape and some with en- ions (acts as an alkali and buffering agent) in DM medium
dospores (by spore stain method). Biochemical identifica- benefited hydrogen production with the C. butyricum CGS5
tion by Rapid ANA II microtest system indicates that the strain. The final pH of the cultures all decreased from 7.5 to
six strains were similar to each other and all belong to 4.5–5.0 and the culture with higher H2 production displayed
1066 W.-M. Chen et al. / International Journal of Hydrogen Energy 30 (2005) 1063 – 1070
Fig. 1. Neighbor-joining showing phylogenetic positions of six biohydrogen producing strains and Clostridium species based on 16S rDNA
sequence comparisons. Bacillus aeolius 4-1T was used as an outgroup. Bootstrap values are indicated at nodes. Only bootstrap values > 50%
are shown. Scale bar, 1% sequence dissimilarity (one substitution per 100 nt). Representative sequences in the dendrogram were obtained
from GenBank (accession number in parentheses).
Table 1
Cell growth and hydrogen production of Clostridium butyricum CGS5 on different culture medium
Medium Maximum growth Final cell concentration Final pHa Total hydrogen
rate (h−1 ) (g dry cell/l) production (ml)b
pH adjustment
1
1 100
Cell growth
80
60
0.1
Sucrose
40
remaining
0.1
20
(a)
0.01 0
2.0 50 pH 6.5
H2 content pH=6.5
pH 6.0
concentration (g/l)
production (l)
Residual sucrose
40 15 pH=6.0
1.5 pH 5.5
pH=5.5
30 pH 5.0
pH=5.0
1.0
H2 production 20 10
0.5
10
(b)
0.0 0 5
250
Hydrogen production
200
rate (ml/h/l)
0
150 5
100 Cumulative hydrogen 4
50 production (l)
(c) 3
0
7.5
800
2
Total volatile fatty acid
7.0
(TVFA; mg COD/l)
pH
600 6.5 1
pH
6.0
400
5.5 0
200 TVFA 5.0 0 10 20 30 40
(d) 4.5
0 Time (h)
0 5 10 15 20 25 30 35
Time (h) Fig. 3. Time-course profile of cell growth, sucrose consumption,
and cumulative hydrogen production of Clostridium butyricum
Fig. 2. Dynamic behavior of batch fermentation of Clostridium bu- CGS5 cultivated on DMI medium at different pH values (5.0, 5.5.
tyricum CGS5 with DMI medium containing 20 g COD/l (17.8 g/l) 6.0 and 6.5). The initial sucrose concentration was 20 g COD/l
of sucrose as sole carbon source. (a) Profiles cell growth and su- (17.8 g/l).
crose consumption, (b) Profiles of hydrogen evolution and concen-
tration, (c) The profile of hydrogen production rate, and (d) Profiles
of pH and formation of soluble metabolite.
exponential growth (14 h) with the maximal hydrogen pro-
duction rate (219 ml/h/l) occurring at 17 h, where cell growth
had entered early stationary phase (Fig. 2a–c). This seems
a lower pH. The decrease in pH was apparently due to pro- to imply that generation of hydrogen was not a preferable
duction of acidic metabolites, predominantly consisting of event during assimilation of carbon substrate for the gain
butyric acid, acetic acid, and propionic acid (Table 3). of biomass. This may be due to a predominant metabolic
electron flow towards biosynthesis, decreasing the availabil-
3.3. Dynamics of hydrogen fermentation ity of electrons for hydrogenase to produce H2 . The hydro-
gen content increased sharply since the onset of hydrogen
Although C. butyricum is known as an effective hydrogen production and reached a maximal value of 50% after cul-
producer [9,25], there is little information regarding hydro- tivation for 23 h (Fig. 2b). The pH decreased correspond-
gen performance of pure strain of C. butyricum in a quanti- ingly with H2 production and formation of acidic metabo-
tative fashion. Moreover, the transient relationship between lites (expressed by total volatile fatty acid; TVFA), indi-
hydrogen production and cell growth of C. butyricum has cating that hydrogen evolution was accompanied by forma-
not yet been revealed in detail. Fig. 2 demonstrates the pro- tion of acidic metabolites (Fig. 2b–d). The hydrogen yield
files of cell growth and hydrogen production during batch based on substrate consumption was 0.61 mol H2 /mol su-
fermentation of C. butyricum CGS5 on DMI medium. The crose with a sucrose conversion of ca. 85%. The low hy-
evolution of H2 appeared to start after the middle-stage of drogen yield was apparently due to predominant conversion
1068 W.-M. Chen et al. / International Journal of Hydrogen Energy 30 (2005) 1063 – 1070
Table 2
Performance of hydrogen fermentation with Clostridium butyricum CGS5 on DMI medium under different pH and initial sucrose concentration
pH Sucrose H2 content Sucrose Hydrogen yield Cell Yield Total H2 Volumetric H2 Specific H2
concentration in biogas conversion (mol H2 /mol (g cell/g production production production rate
(g COD/l) (%) (%) sucrose) sucrose) (l) rate (ml/h/l) (ml/h/g cell)
Maximum Overalla
of the carbon substrate into biomass, as only 30% of the at which hydrogen production ceased with a total hydrogen
initial sucrose concentration left when H2 started to evolve production of 2.73 and 2.17 l, respectively (Table 2). Mean-
at 14 h (Fig. 2a and b). The hydrogen production rate de- while, the biomass concentration reached a maximum value
creased from its maximal value of 219–17 ml/h/l when the of 0.9 g/l for pH 6.0 and 1.0 g/l for pH 6.5. However, when
pH dropped from 5.6 to 4.6 (Fig. 2c and d). An elevation of the strain was cultivated at pH 5.5, the rate of cell growth
pH from 4.5 to 6.5 seemed to restore hydrogen production and sucrose consumption was much slower, and hydrogen
of the culture, suggesting that pH control at an appropriate continued to evolve until cultivation for 37 h. The total hy-
level may be required to improve the efficiency of hydrogen drogen production at pH 5.5 was nearly doubled as com-
production. pared with that obtained at pH 6.0 and 6.5, whereas the fi-
nal cell concentration (0.78 g/l) was lower than that for pH
3.4. Effect of pH on hydrogen production 6.0 and 6.5. Therefore, under batch operations, higher cell
growth efficiency at pH 6.0 and 6.5 led to higher biomass
Hydrogen fermentation was conducted at four different yields, but lower hydrogen yields (Table 2) since a larger
pH values, namely, 6.5, 6.0, 5.5, and 5.0, to identify the op- amount of carbon substrate was converted to biomass, in-
timal pH for hydrogen production with C. butyricum CGS5. stead of H2 , and the carbon source was quickly exhausted.
For comparison, a control experiment without pH control However, despite resulting in lower hydrogen yields, pH 6.0
was also carried out. The pH range was chosen because op- and 6.5 (esp. pH 6.0) gave a slightly highermaximum and
timal pH for anaerobic H2 production reported in literature overall hydrogen production rate than those obtained at pH
was essentially within the range of 5.5–6.7 [21,26–30]. The 5.5 (Table 2). The specific hydrogen production rate at pH
results show that cell growth and hydrogen production were 6.0 was also 14% higher than that obtained at pH 5.5 (Table
strongly inhibited at pH 5.0 (Fig. 3). Operation at pH 5.5 2). Thus, for operations with continual supply of carbon
attained the highest total hydrogen production and hydro- substrate (e.g., operations at continuous or fed-batch mode),
gen yield of 5.3 l and 2.78 mol H2 /mol sucrose, respectively. control at pH 6.0 may be preferable for hydrogen production
However, the best maximal volumetric hydrogen production due to the potential of attaining higher hydrogen production
rate (0.21 l/h/l) occurred at pH 6.0 (Table 2). In contrast to rates.
the run without pH control, the substrate conversion was
much higher (near 98%) when the culture pH was controlled 3.5. Effect of sucrose concentration on hydrogen production
at 5.5–6.5. The gas-phase H2 content was in the range of
50–64% for all tests, with the highest value of ca. 64% at Organic loading usually plays a crucial role in the effi-
pH 5.5 (Table 2). Although obtaining significantly higher ciency of anaerobic hydrogen production [31,32]. Table 2
growth rate than that for pH 5.5, operation at pH 6.0 and shows the variations in hydrogen fermentation performance
6.5 gave markedly lower hydrogen yield and total hydrogen at different concentrations of the carbon source (sucrose).
production than those obtained for pH 5.5 (Table 2). Fig. 3 The results clearly indicate that a sucrose concentration
indicates that cells grew rapidly at pH 6.0 and 6.5 and su- of 20 g COD/l exhibited the best performance in hydro-
crose was completely consumed within 15 h of cultivation, gen production for most of categories compared in Table 2,
W.-M. Chen et al. / International Journal of Hydrogen Energy 30 (2005) 1063 – 1070 1069
Table 3
Production of soluble metabolites during hydrogen fermentation with Clostridium butyricum CGS5 on DMI medium under different pH and
initial sucrose concentration
especially for total hydrogen production (VH2 ) and hydrogen panied by a higher total volatile fatty acid content (TVFA)
yield (YH2 ). The VH2 and YH2 both increased as the substrate and a higher HBu/SMP ratio. This suggests that hydrogen
concentration increase from 5 to 20 g COD/l, while they de- production with the C. butyricum CGS5 was directed by
creased slightly when the substrate concentration was ele- acidogenic pathways and was essentially butyrate-type fer-
vated further to 30 g COD/l. Similar trend was observed for mentation. The behavior of soluble metabolite production is
the dependence of specific growth rate on substrate concen- quite consistent with that of the original sludge (where the
tration (data not shown), suggesting that substrate inhibition pure strain was isolated), which produced similar metabo-
may occur when the sucrose concentration was higher than lites and HBu was also the predominant soluble product
30 g COD/l. The hydrogen production rates were similar for [10–14].
the tests with a sucrose concentration of 5–20 g COD/l, but
the rates were slightly lower for operation at 30 g COD/l
(Table 2). The optimal concentration (20 g COD/l) for hydro- 4. Conclusions
gen production with the C. butyricum CGS5 strain appears
to be identical to that obtained with the anaerobic sewage Hydrogen-producing Clostridium butyricum strain was
sludge [10–14] where the CGS5 strain was isolated. This successfully isolated from anaerobic sludge exhibiting ex-
seems to indicate that the CGS5 strain belongs to the major cellent hydrogen production efficiency. The presence of fer-
hydrogen-producing bacterial populations in the acclimated ric ions in the culture medium appeared to be critical to the
anaerobic sludge that was shown to produce hydrogen very hydrogen production activity of the pure isolate. The perfor-
effectively [12,14]. mance of hydrogen production was also influenced by the
culture pH and the initial carbon substrate (sucrose) con-
3.6. Production of soluble metabolites centration. Cell growth and hydrogen production was inhib-
ited at a pH of 5.0. Cell growth was more efficient at pH
Results concerning production of soluble products dur- 6.0–6.5, while the total hydrogen production and hydrogen
ing hydrogen fermentation are summarized in Table 3. The yield were higher when the C. butyricum strain was cul-
soluble metabolites include butyric acid (HBu), acetic acid tivated at pH 5.5. Operation at pH 6.0 attained a slightly
(HAc), propionic acid (HPr), and ethanol (EtOH). The most higher hydrogen production rate than that for the other pH
abundant product was HBu, which accounted for 36–60% values. Hydrogen production in a batch culture seems to be
of total soluble microbial products (SMP). The production limited when cell growth was thriving (e.g., at pH 6.0–6.5),
of HAc and HPr were also significant, whereas ethanol was mainly due to rapid depletion of carbon substrate for the
produced at a lesser amount (Table 3). The EtOH/SMP ratio gain of biomass. Thus, continuous culture may be favor-
was essentially less than 13%. Hence, hydrogen fermenta- able for hydrogen production due to a sufficient supply of
tion was a favorable event in C. butyricum strain because carbon substrate and a controllable cell growth rate via the
production of electron-consuming solvents (e.g., ethanol) adjustment of feeding rate. This study shows that hydrogen
was relatively small [33,34]. Comparison between hydro- production activity was optimal when the sucrose concen-
gen production (Table 2) and soluble metabolites production tration was 20 g COD/l and the pH was controlled at the
(Table 3) shows that better hydrogen production was accom- range of 5.5–6.0.
1070 W.-M. Chen et al. / International Journal of Hydrogen Energy 30 (2005) 1063 – 1070