D. Sept and J.A. Tuszynski: A Landau-Ginzburg Model of The Co-Existence of Free Tubulin and Assembled Microtubules in Nucleation and Oscillations Phenomena
D. Sept and J.A. Tuszynski: A Landau-Ginzburg Model of the Co-existence of Free Tubulin and Assembled Microtubules in Nucleation and Oscillations Phenomena
D. Sept and J.A. Tuszynski: A Landau-Ginzburg Model of The Co-Existence of Free Tubulin and Assembled Microtubules in Nucleation and Oscillations Phenomena
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A Landau-Ginzburg Model of the Co-existence of
Free Tubulin and Assembled Microtubules in
Nucleation and Oscillations Phenomena
D. SEPT! and J.A. TUSZYNSKI
Sam Diego, ba
Atherts, 766281, Canada
M
Intively rigid cylindrical protein
thomselves to participate in and perform various func
Of the most is what has bee
found above a threshold of tut
undergo smooth, damped o:
totn! amount of assembled tubul
single microtubule have been extensivel
such as Monte Carlo simulations, chemi
ro butfer. The dynamics of a
ng a variety of techniques
the master equa-AND L.A TUSZYRNK
yrmation about where
‘These waves of asscml
the sample and propag:
ly {18}, a model
the observed microtubule osc!
5 was shown to reproduce
dimers bound
description wa
MT, +Tu— GPP SMT ay
MT,—“2n(Tu ~ GDP) aay
ndTu = GTP) MT, 3)
Tu GDP*+Tu — GTP aa)
MT, + Tu— GDP—>(n + Tu GPP),
an unassembled tubulin dimer
onomer (see [18} for more
the variables depended onl
ay well in order to gain i
extend our mod!
sume extent. Assembled microoubules aren
fand would thus diffuse much more slowly. so their dit
With these ack
me hy NT — ha + byt + Da?
| found
a value of Ds = 56 x 10-*
{19}. Since we are modeling i
joice of Da, To the best of our knowled;
where we have expanded the denomin:
concentration of microwubules to warrant such a proced
) to obtain
b= Dib + kab —
js in the form of the
s played a prom
fe will demonstrate in the remainder ofwhere
g
2
i
"Sa
é
30 75
“Tubulin Concentration (iM)
Figure 1
Fygenson
of the mathematical analysis done
the existence of both
waves and plane wave propa by v such th
ier case reduces to:
Dif" +08! + hag — kid" = 0 aay
db Kk 5
=xcvn @ = and ky = cas)
fax-wi oa oe @ »
ter section and show its relevance to
the process of microt
eof shedding new
proportional 10 the
J.A. Tuszynski, J.A. Brown, E. Crawford, E.J. Carpenter, M.L.A. Nip, J.M. Dixon and M.V. Sataric: Molecular Dynamics Simulations of Tubulin Structure and Calculations of Electrostatic Properties of Microtubules