Medical Information Retrieval and Management

BIOSIS Previews
“If it’s in the life sciences, BIOSIS products are the place to start”

About me
Xu Siyang 许 四洋
Master, Major in Information Management Graduated from Hunan Medical University, 2001

Contact details:
Xu Siyang
Office: Room 629, SMU Lib Building Tel: 61648053 Email: xsy2004@fimmu.com QQ:852832875

What is Information Retrieval?
 Querying against a database (a set of

documents) to find a subset of "relevant" documents .

When you need IR? DESIAGN? METHOD? ANALYSIS? COMPARE? .

When you need IR? TOPIC? ANALYSIS? WRITE? PUBLICATION? .

When you need IR? DIAGNOSIS? TREATMENT? BEST SURGERY? CONTRADICTION? .

When you need IR? TOPIC? HISTORY? TREND? OPION? .

where is it?  Papers: journal paper. meeting paper  Dissertation  Monograph /textbook  Patent document  Database  … …. .I need Information.

6 March 16. 2012 .v.148 n.

Content .

Journal of Indian Medical Association  JAMA .

So many! .

dissertations.  Bibliographic database : for journal papers.  Catalogue: for books .How to find what you need quickly?  Fulltext database: for journal paper. books. etc. etc. dissertations. meeting paper. meeting papers.

Exclusive shop Shopping mall .

Searching tools  Bibliographic database surrogate source document Record/item/citation/ Journal paper Meeting report/presentation Book/book chapter Monograph Dissertation Technical report .

Principle of IR with computer  Mapping or match Keywords or text words search query term= terms in designated fields extract Searching subject Source document .

com .Main Bibliographic Database for Life Science and Related Area  Chemical Abstract (CA)  Biological Abstract online:SciFinder  Science Citation Index SCI Online: BIOSIS Preview  Index Medicus Online: PubMed  Excerpta Medica Online: EMbase.

.

EBM EMBASE’s focus: drug research and pharmacology. including clinical medicine. PubMed's focus: biomedicine. oncology.BP and PubMed and EMBASE  The three are complementary databases covering medicine documents: BIOSIS Preview's focus: pre-clinical research information in biology and biomedicine. dentistry. . nursing.

Biosis Previews and EMBASE .

BP and MEDLINE (PubMed) .

Objective  Know about BIOSIS Previews  Able to make good use of BIOSIS Previews search features  Able to process BIOSIS Previews search results efficiently and effectively .

BP: history  About BIOSIS® Founded in 1926 BIOSciences Information Service World’s largest abstracting and indexing service focused on the life sciences Headquartered in Philadelphia (USA) .

Web of Knowledge:Search interface provided by ISI .

conferences and symposia in the life sciences – Patent coverage gives critical information – Book chapter.000 international journals – The most comprehensive source for meetings. software review .BP: source document coverage – Broadest coverage of life sciences journals: >5.

zoology  Interdisciplinary areas biotechnology. bioengineering. bioprocessing. plant science. biochemistry molecular biology  Related areas Biomedical Agriculture Pharmacology Ecology .BP: subject coverage  Traditional topics biology. animal science.

BP: geographical coverage North America (31%) Asia. America (2%) Africa (1%) . Australasia (14%) Europe & Middle East (52%) Central & S.

Outline  Overview of BIOSIS Previews  How to use BP ? Access to general search Processing your results Refine or analyze your results  Make better use of BP Advanced search--construct complicated query  Personalize BP .

Our library homepage: http://Lib.smu.cn .edu.

.

.

.

.

Search option Search area Timespan limits .

.

Search fields in BP .

com/help/B IOSIS/h_fullrec. please refer to the following web page: http://images.isiknowledge.html . For explanation of these fields.

Please find it using BP and try to download the full text. . PRADEEP KUMAR in 2012 was published on <Molecular Ecology Resources>.Try it !  We know a paper written by N.

.

TRY IT!  Now we need a set of papers about DNA barcoding research in India. How to search using BP? .

.

how to do with BP’s “ANALYZE RESULTS “feature .TRY IT!  Now we found 19 papers about DNA barcoding research in India.  Are there meeting papers ?  If I want to filter out papers about DNA barcoding on mammalian .

.

.

.

e.g. gene targeting used in studies concerning nerve system or neurology

Recall rate versus Accuracy
#1 Title=("gene targeting" and (nerv* or neur*)) #2 Title=(gene targeting and (nerv* or neur*))

#3 Title=("gene targeting") AND Major Concepts=(nerv* or neur*) #4 Topic=("gene targeting" and (nerv* or neur*))

Search fields: Topic:
 Search in the following fields:

title, abstract, major concept etc.

 Almost a full record search  A broad search

Search field: major concept
 When to use it?

for broad search, a not so specific subject.

 How to use it?

① find proper concept which can cover your subject in major concept table ②do document search with your concept term

Broad topic Dental Medicine cardiology Specific topic Periodontitis Myocardial infarction Anti-inflammatory aspirin drugs .

.

.

.

.

.

.

.

.

.

.

.

Refine with text words = Search within results = Do second search .

.

.

.

.

.

.

.

.

.BP search exercises: Search documents on the following topics: 1 Methods or technique used for Hydrastis (or coptisine ) study 2 RNA interference ( or RNAi) used in breast neoplasm study Please try to refine your results by document type to see how many journal papers you get.

Outline  Overview of BIOSIS Previews  How to use BP ? Access to general search Processing your results Refine or analyze your results  Make better use of BP Advanced search--construct complicated query  Personalize BP .

e.g. gene targeting used in studies concerning nerve system neoplasms Ts=gene targeting and MC=(nerv* or neur*) and DS=neoplasm Filed tag for Disease Data .

S.A  Our qurey: Filed tag for Geographic Data #1 (TI=( influenza A and H1N1) or DS= =( influenza A and H1N1)) and GE=usa #2 refine or analyze our results by Document Type .Search exercise:  Search for journal or meeting papers on influenza A(H1N1) outbreak in U.

.

Questions? .

isiknowledge.com/help/B IOSIS/h_fullrec. For explanation of these fields. please refer to the following web page: http://images.html .

.  Able to make good use of BIOSIS Previews  Able to process BIOSIS Previews search results .Summary  Know about BIOSIS Previews It is very important when you want to do a thorough documents search in life science.

Thank You ! .

Biosystematics Kingdom Phylum Class Order Family Genus Species .

Organisms Microorganisms Kingdom Plantae Animalia .

Example: Kingdom Phylum Class Order Family Genus Species Animalia Chordata Vertebrata Mammalia Primates Hominidae .

http://scientific.com/support/ recorded-training/wok/ http://isiwebofknowledge.thomson.com/current user_wokhome/cu_trainingsupport/ .

Sign up to vote on this title
UsefulNot useful