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Many areas rely on organic chemistry,

including:

Biology
Petroleum
Polymers
Genetic Engineering
Agriculture
Pharmacology
Consumer Products
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H
H

C
H

H
C

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Organic molecules can have very complex


structures.
A number of formats are used to represent
organic compounds.
Each has its own advantages but the goal is
the same, to accurately describe the
structure of a compound.
Lets look at some different representations.

Similar to structural formula.


Each line represents a bond.
Carbons are assumed to be present at the end
of each line segment.
Hydrogen is not shown when bound to carbon.
OH

H2 H2
C C
H2C

CH2
C C
H2 H2

H2 H2
C C
H2C

H2C

H2 H2
C C
OH

C C
H2 H2

H2C

H2 H2
C C
H

H2C

C C
H2 H2

H2C

H2
C

C C
H2 H2

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Three dimensional representations

CH3
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Another key feature of carbon is its ability to


form double and triple bonds.
This can be between two carbons
alkenes (C=C) and alkynes (C C)
It can also be between carbon and another
element.
C=O
C=NC N

Both are models of propane.


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cis-retinal

H3C

CH3

H3C
C=C
H

Light causes a
change from cisto trans-. This is
how we see.

C=C

light

CH3

several steps
O

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trans-retinal

Several enzymes
are required
to convert
trans-retinal
Back to the
cis-form.
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cis-

If you dont believe it,


give it a try!

trans22 - 15

CHO

CHO

HO

OH

CH2OH

CH2OH

H
CH2OH

Chiral center

CHO

CHO
HO

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OH
CH2OH
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Is the red carbon a stereocenter?


H!
HO!

H!
H3C-!
H!

H!
H3C-!
CH2CH3!

Cl!

I!

Br!

F!

H!H! H!
Cl!H! Cl!

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Simplest members of the hydrocarbon family.

contain only hydrogen and carbon


only have single bonds
All members have the general formula of

CnH2n+2

Light is passed through a polarized filter.


A solution of an optical isomer will rotate the
light one direction.

Twice as many hydrogen


as carbon + 2!
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These go up
as the number
of carbons
increases.!

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Name

bp, oC

mp, oC

Density at 20 oC

Methane
Ethane
Propane
Butane
Pentane
Hexane
Heptane
Octane
Nonane
Decane

-161.7
- 88.6
- 42.2
-0.5
36.1
68.7
98.4
125.6
150.7
174.0

-182.6
-182.8
-187.1
-135.0
-129.7
- 94.0
- 90.5
- 56.8
-53.7
-29.7

0.000 667
0.001 25
0.001 83
0.002 42
0.626
0.659
0.684
0.703
0.718
0.730
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heat or light

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Prefix
MethEthPropButPentHexHeptOctNonDec-

Carbons
1
2
3
4
5
6
7
8
9
10

I see much
memorization in
your future!!

Lets practice some names


We will be leaving out the hydrogens.
This makes the carbon chain easier to see.
Its also easier
to draw!!

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C!

C - C - C - C - C - C!

C - C - C - C - C!

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Name the following.


(CH3)2CHCH2CH2CH(CH3)2
3,5-dimethyl heptane

This is a condensed structural formula.


3-ethyl-5-methylheptane

First convert it to a carbon skeleton, leaving


out the hydrogens.

2,3,3,7,8-pentamethyldecane
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(CH3)2CHCH2CH2CH(CH3)2

1. Longest chain is 6 - hexane


C
C
|
|
C-C-C-C-C-C

2. Two methyl groups - dimethyl


3. Use 2,5-dimethylhexane

Now name it!


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C-C-C-C-O-H

1. Follow the same system as with alkanes.


2. Give the name and carbon number for the
halide just like a side branch.
C-C-F

C-C-C

C-C-C-C-C

Cl

C-Br

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The mechanism takes place in a single step.


This is supported by the observed rate law.
Rate = k [HO-][CH3Br]
SN2 reactions also take place with inversion
of configuration.
CH3

CH3

Cl

+ HO-

+ ClOH

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H
!+

H O-

C
H

!-

Br

To account for the inversion,


the nucleophile must approach
from the back of the carbon
The nucleophile acts as a Lewis
base and the substrate as a
Lewis acid.

HO

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Predicting whether an SN2 reaction will occur


is possible.

Br

The SN2 reaction

H H

Nuc:- + RX
H
!-

HO

!+

+ Br

C
H

is similar to a Bronsted-Lowry acid base


reaction
B:- + HX

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RNuc + X-

HB + X22 - 48

H
C

Cl
C

-(CH2-CH2)-

)-(CH2-CH
|

Cl

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Formula
Name

Monomer

Polypropylene

Polymer

CH3CH=CH2

( CH-CH2 )
|

CH3
Polystyrene

-CH=CH2

Polychloroprene H2C=CHC=CH2
|

( CH-CH2 )

( CH2CH=CCH2 )

Cl

Cl
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Rad-CH2-CHCl + CH2
Rad

+ CH2 CHCl

CHCl

Rad CH2 CHCl


Rad-CH2-CHCl -CH2-CHCl
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Adipoyl chloride
ClC(CH2)4CCl
||
||
O
O

Rad-CH2-CHCl -CH2-CHCl + Rad-CH2-CHCl -CH2-CHCl


Rad-CH2-CHCl -CH2-CHCl

CHCl-CH2-CHCl-CH2-Rad

hexamethylenediamine
+

H2N(CH2)6NH2

ClC(CH2)4C-NH(CH2)6NH2 + HCl
||
||
O
O

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ClC(CH2)4C-NH(CH2)6NH2
||
||
O
O
HO

Product still has two reactive groups.


Polymer length is a function of time.

HO

O
HO

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HO

O
HO

HO

O
HO

HO

O
HO

HO

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crosslink

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