METABOLITE

ACALD
/ ABBREVIATION
ACALDt
13dpg
0
2pg
0
3pg
0
6pgc
0
6pgl
0
ac
0
ac(e)
0
acald
-1
acald[e]
0
accoa
1
acon-C
0
actp
0
adp
0
akg
0
akg(e)
0
amp
0
atp
0
cit
0
co2
0
co2(e)
0
coa
-1
dhap
0
e4p
0
etoh
0
etoh(e)
0
f6p
0
fdp
0
for
0
for(e)
0
fru[e]
0
fum
0
fum(e)
0
g3p
0
g6p
0
glc-D(e)
0
gln-L
0
gln-L(e)
0
glu-L
0
glu-L(e)
0
glx
0
h2o
0
h2o(e)
0
h
1
h(e)
0
icit
0
lac-D
0

ACKr
0
0
0
0
0
0
0
1
-1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

ACONTa
0
0
0
0
0
-1
0
0
0
0
0
1
1
0
0
0
-1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

ACONTb
0
0
0
0
0
0
0
0
0
0
1
0
0
0
0
0
0
-1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
1
0
0
0
0
0

ACt2r
0
0
0
0
0
0
0
0
0
0
-1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
-1
0
0
0
1
0

ADK1
0
0
0
0
0
1
-1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
1
-1
0
0

AKGDH
0
0
0
0
0
0
0
0
0
0
0
0
2
0
0
-1
-1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
0
-1
0
0
0
0
1
0
-1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

lac-D(e)
mal-L
mal-L[e]
nad
nadh
nadp
nadph
nh4
nh4(e)
o2
o2(e)
oaa
pep
pi
pi(e)
pyr
pyr(e)
q8
q8h2
r5p
ru5p-D
s7p
succ
succ(e)
succoa
xu5p-D

0
0
0
-1
1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
-1
1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
1
0

AKGt2r

ALCD2x
0
0
0
0
0
0
0
0
0
0
0
0
0
1
-1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
1
-1
0
0

ATPM
0
0
0
0
0
0
0
1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
-1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
1
0
0
0

ATPS4r
0
0
0
0
0
0
0
0
0
0
0
0
1
0
0
0
-1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
-1
0
1
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
-1
0
0
0
1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
1
0
3
-4
0
0

Biomass_Ecoli_core
CO2t
CS
0
0
0
0
-1.496
0
0
0
0
0
0
0
0
0
0
0
0
0
-3.7478
0
0
0
0
0
59.81
0
4.1182
0
0
0
0
0
-59.81
0
0
0
0
1
0
-1
3.7478
0
0
0
-0.361
0
0
0
0
0
-0.0709
0
0
0
0
0
0
0
0
0
0
0
0
0
-0.129
0
-0.205
0
0
0
-0.2557
0
0
0
-4.9414
0
0
0
0
0
-59.81
0
0
0
59.81
0
0
0
0
0
0
0

CYTBD
0
0
0
0
0
0
0
0
0
-1
0
0
0
0
0
0
0
1
0
0
1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
-1
0
1
0
0
0

D-LACt2
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
1
0
-2
2
0
0

0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
1
-1
0
1

0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
-1
1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
0
1
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
0
-1
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
-3.547
3.547
13.0279
-13.0279
0
0
0
0
-1.7867
-0.5191
59.81
0
-2.8328
0
0
0
-0.8977
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
0
0
-1
0
0
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
-0.5
0
0
0
0
0
0
0
1
-1
0
0
0
0
0
0
0

-1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

ENO

ETOHt2r
0
-1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
1
0
0
0
0
0

EX_ac(e)
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
1
-1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
1
-1
0
0

0
0
0
0
0
0
-1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

EX_acald(e)EX_akg(e) EX_co2(e) EX_etoh(e) EX_for(e) EX_fru(e)

0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
-1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
-1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
-1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
-1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
-1
0
0
0
0
0
0
-1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
1
0
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

EX_fum(e) EX_glc(e) EX_gln_L(e)EX_glu_L(e)EX_h(e)

EX_h2o(e) EX_lac_D(e)EX_mal_L(e)EX_nh4(e)
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
-1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
-1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
-1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
-1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
-1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
-1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

-1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

0
0
-1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
-1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

EX_o2(e)

EX_pi(e)
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

EX_pyr(e) EX_succ(e) FBA

0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

FBP
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
1
0
0
0
0
-1
0
0
0
0
0
1
0
0
0
0
0
0
0
0
0
0
0
0
0

FORt2
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
1
-1
0
0
0
0
0
0
0
0
0
0
0
0
0
-1
0
0
0
0
0

FORti
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
1
-1
0
0
0
0
0
0
0
0
0
0
0
0
0
1
-1
0
0

FRD7
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
-1
1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
-1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
0
-1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
0
0
-1
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
-1
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
-1
0
0

0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
0
1
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
1
-1
0
0
0
1
0
0
0

FRUpts2

FUM
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
1
0
0
0
-1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
-1
0
0
0
0
0
0
0
0
0
-1
0
0
0
0
0

FUMt2_2 G6PDH2r GAPD

0
0
0
0
0
0
0
0
0
1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
1
0
-1
0
0
0
0
-1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
2
1
-2
0
0
0
0
0

GLCpts
1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
-1
0
0
0
0
0
0
0
0
0
1
0
0
0

GLNS
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
1
-1
0
0
0
0
0
0
0
0
0
0
0

GLNabc
0
0
0
0
0
0
0
0
0
0
0
0
1
0
0
0
-1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
1
0
-1
0
0
0
0
1
0
0
0

GLUDy
0
0
0
0
0
0
0
0
0
0
0
0
1
0
0
0
-1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
1
-1
0
0
0
-1
0
1
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
0
1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
-1
0
0
-1
0
1
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
-1
0
0
1
0
0
0
0
0
0
0
0
0
0

0
1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
-1
1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
-1
1
0
0
0
0
0
0
0
0
-1
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
-1
0
0
1
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
-1
0
0
0
0
0
1
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
0
1
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
-1
1
1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

GLUN

GLUSy
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
-1
0
1
0
0
-1
0
0
0
0
0

GLUt2r
0
0
0
0
0
0
0
0
0
0
0
0
0
-1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
-1
0
2
0
0
0
0
-1
0
0
0

GND
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
1
-1
0
0
0
1
-1
0
0

H2Ot
0
0
0
-1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

ICDHyr
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
1
-1
0
0
0
0

ICL
0
0
0
0
0
0
0
0
0
0
0
0
0
1
0
0
0
0
1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
-1
0

LDH_D
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
1
0
0
0
0
-1
0

MALS
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
1
0
0
-1

0
0
0
0
0
0
0
0
0
-1
0
0
0
0
0
0
0
0
0
0
1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
-1
-1
0
1
0
0
0

0
0
0
0
0
0
0
1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
1
-1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
-1
1
0
0
0
0
0
0
0
0
0
0
0
0
0
1
0
0
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
-1
1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
1
0
0
0

0
0
0
-1
1
0
0
0
0
0
0
0
0
0
0
1
0
0
0
0
0
0
0
0
0
0

0
1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

MALt2_2 MDH
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
2
-2
0
0

ME1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
1
0
0
0

ME2
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

NADH16
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
-4
3
0
0

NADTRHD NH4t
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

O2t
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

PDH
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
1
0
0
0
0
0
0
0
0
1
0
-1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

0
1
-1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

0
-1
0
-1
1
0
0
0
0
0
0
1
0
0
0
0
0
0
0
0
0
0
0
0
0
0

0
-1
0
-1
1
0
0
0
0
0
0
0
0
0
0
1
0
0
0
0
0
0
0
0
0
0

0
-1
0
0
0
-1
1
0
0
0
0
0
0
0
0
1
0
0
0
0
0
0
0
0
0
0

0
0
0
1
-1
0
0
0
0
0
0
0
0
0
0
0
0
-1
1
0
0
0
0
0
0
0

0
0
0
-1
1
1
-1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
1
-1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
1
-1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
-1
1
0
0
0
0
0
0
0
0
0
0
-1
0
0
0
0
0
0
0
0
0
0

PFK

PFL
0
0
0
0
0
0
0
0
0
0
0
0
1
0
0
0
-1
0
0
0
0
0
0
0
0
-1
1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
1
0
0
0

PGI
0
0
0
0
0
0
0
0
0
1
0
0
0
0
0
0
0
0
0
0
-1
0
0
0
0
0
0
1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

PGK
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
1
0
0
0
0
0
0
0
-1
0
0
0
0
0
0
0
0
0
0
0
0

PGL
1
0
-1
0
0
0
0
0
0
0
0
0
1
0
0
0
-1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

PGM
0
0
0
1
-1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
-1
0
1
0
0
0

PIt2r
0
-1
1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

PPC
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
1
-1
0
0

PPCK
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
-1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
-1
0
1
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
1
0
0
0
-1
0
1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
-1
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
0
1
-1
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
0
0
1
-1
1
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
0
0
-1
1
0
0
0
0
0
0
0
0
0
0
0
0
0

PPS

PTAr
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
1
-1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
-1
0
2
0
0
0

PYK
0
0
0
0
0
0
0
0
0
-1
0
1
0
0
0
0
0
0
0
0
1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

PYRt2r
0
0
0
0
0
0
0
0
0
0
0
0
-1
0
0
0
1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
-1
0
0
0

RPE
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
1
-1
0
0

RPI
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

SUCCt2_2 SUCCt3
SUCDi
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
2
1
-2
-1
0
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
1
1
0
-1
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
0
-1
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
-1
0
0
1
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
1
-1
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
-1
0
0
0
0
1

0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
-1
1
0
0
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
1
-1
0
0

0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
-1
1
0
0

0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
-1
1
0
0
0
-1
0
0
0

SUCOAS

TALA
0
0
0
0
0
0
0
0
0
0
0
0
1
0
0
0
-1
0
0
0
-1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

THD2
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
1
0
0
1
0
0
0
0
0
0
-1
0
0
0
0
0
0
0
0
0
0
0
0
0

TKT1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
2
-2
0
0

TKT2
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
1
0
0
0
0
0
0
0
0
0
0
0
0
0

TPI
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
-1
0
0
1
0
0
0
0
0
0
1
0
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
-1
0
0
0
0
0
0
0
0
0
0
1
0
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
0
1
0
0
0
0
0
0
0
0
-1
0
1
0

0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
-1
0
0
0
0

0
0
0
1
-1
-1
1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
-1
0
1
0
0
0
-1

0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
-1

0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

abbreviation
officialName
ACALD
acetaldehyde dehydrogenase (acetylating)
ACALDt
acetaldehyde reversible transport
ACKr
acetate kinase
ACONTa
aconitase (half-reaction A, Citrate hydro-lyase)
ACONTb
aconitase (half-reaction B, Isocitrate hydro-lyase)
ACt2r
acetate reversible transport via proton symport
ADK1
adenylate kinase
AKGDH
2-Oxogluterate dehydrogenase
AKGt2r
2-oxoglutarate reversible transport via symport
ALCD2x
alcohol dehydrogenase (ethanol)
ATPM
ATP maintenance requirement
ATPS4r
ATP synthase (four protons for one ATP)
Biomass_Ecoli_core_w/GAM
Biomass Objective Function with GAM
CO2t
CO2 transporter via diffusion
CS
citrate synthase
CYTBD
cytochrome oxidase bd (ubiquinol-8: 2 protons)
D_LACt2
D-lactate transport via proton symport
ENO
enolase
ETOHt2r
ethanol reversible transport via proton symport
EX_ac(e)
Acetate exchange
EX_acald(e)
Acetaldehyde exchange
EX_akg(e)
2-Oxoglutarate exchange
EX_co2(e)
CO2 exchange
EX_etoh(e)
Ethanol exchange
EX_for(e)
Formate exchange
EX_fru(e)
D-Fructose exchange
EX_fum(e)
Fumarate exchange
EX_glc(e)
D-Glucose exchange
EX_gln_L(e)
L-Glutamine exchange
EX_glu_L(e)
L-Glutamate exchange
EX_h(e)
H+ exchange
EX_h2o(e)
H2O exchange
EX_lac_D(e)
D-Lactate exchange
EX_mal_L(e)
L-Malate exchange
EX_nh4(e)
Ammonium exchange
EX_o2(e)
O2 exchange
EX_pi(e)
Phosphate exchange
EX_pyr(e)
Pyruvate exchange
EX_succ(e)
Succinate exchange
FBA
fructose-bisphosphate aldolase
FBP
fructose-bisphosphatase
FORt2
formate transport via proton symport (uptake only)
FORti
formate transport via diffusion
FRD7
fumarate reductase
FRUpts2
Fructose transport via PEP:Pyr PTS (f6p generating)

FUM
FUMt2_2
G6PDH2r
GAPD
GLCpts
GLNS
GLNabc
GLUDy
GLUN
GLUSy
GLUt2r
GND
H2Ot
ICDHyr
ICL
LDH_D
MALS
MALt2_2
MDH
ME1
ME2
NADH16
NADTRHD
NH4t
O2t
PDH
PFK
PFL
PGI
PGK
PGL
PGM
PIt2r
PPC
PPCK
PPS
PTAr
PYK
PYRt2r
RPE
RPI
SUCCt2_2
SUCCt3
SUCDi
SUCOAS
TALA
THD2

fumarase
Fumarate transport via proton symport (2 H)
glucose 6-phosphate dehydrogenase
glyceraldehyde-3-phosphate dehydrogenase
D-glucose transport via PEP:Pyr PTS
glutamine synthetase
L-glutamine transport via ABC system
glutamate dehydrogenase (NADP)
glutaminase
glutamate synthase (NADPH)
L-glutamate transport via proton symport, reversible (periplasm)
phosphogluconate dehydrogenase
H2O transport via diffusion
isocitrate dehydrogenase (NADP)
Isocitrate lyase
D-lactate dehydrogenase
malate synthase
Malate transport via proton symport (2 H)
malate dehydrogenase
malic enzyme (NAD)
malic enzyme (NADP)
NADH dehydrogenase (ubiquinone-8 & 3 protons)
NAD transhydrogenase
ammonia reversible transport
o2 transport via diffusion
pyruvate dehydrogenase
phosphofructokinase
pyruvate formate lyase
glucose-6-phosphate isomerase
phosphoglycerate kinase
6-phosphogluconolactonase
phosphoglycerate mutase
phosphate reversible transport via proton symport
phosphoenolpyruvate carboxylase
phosphoenolpyruvate carboxykinase
phosphoenolpyruvate synthase
phosphotransacetylase
pyruvate kinase
pyruvate reversible transport via proton symport
ribulose 5-phosphate 3-epimerase
ribose-5-phosphate isomerase
succinate transport via proton symport (2 H)
succinate transport out via proton antiport
succinate dehydrogenase (irreversible)
succinyl-CoA synthetase (ADP-forming)
transaldolase
NAD(P) transhydrogenase

TKT1
TKT2
TPI

transketolase
transketolase
triose-phosphate isomerase

equation
subSystem
proteinClass
[c] : acald + coa + nad <==> accoa + h + nadh
Pyruvate Metabolism
1.2.1.10
acald[e] <==> acald[c]
Transport, Extracellular
[c] : ac + atp <==> actp + adp
Pyruvate Metabolism
2.7.2.1
[c] : cit <==> acon-C + h2o
Citric Acid Cycle
4.2.1.3
[c] : acon-C + h2o <==> icit
Citric Acid Cycle
4.2.1.3
ac[e] + h[e] <==> ac[c] + h[c]
Transport, Extracellular
[c] : amp + atp <==> (2) adp
Oxidative Phosphorylation
2.7.4.3
[c] : akg + coa + nad --> co2 + nadh + succoa
Citric Acid Cycle
akg[e] + h[e] <==> akg[c] + h[c]
Transport, Extracellular
[c] : etoh + nad <==> acald + h + nadh
Pyruvate Metabolism
1.1.1.1
[c] : atp + h2o --> adp + h + pi
Oxidative Phosphorylation
adp[c] + (4) h[e] + pi[c] <==> atp[c] + (3) h[c] + h2o[c]
Oxidative Phosphorylation
3.6.3.14
[c] : (1.496) 3pg + (3.7478) accoa + (59.8100) atp + (0.3610) e4p + (0.0709) f6p + (0.1290) g3p + (0.2050) g6p + (0.2557) gln-L
co2[e] <==> co2[c]
Transport, Extracellular
[c] : accoa + h2o + oaa --> cit + coa + h
Citric Acid Cycle
(2) h[c] + (0.5) o2[c] + q8h2[c] --> (2) h[e] + h2o[c] + q8[c] Oxidative Phosphorylation
h[e] + lac-D[e] <==> h[c] + lac-D[c]
Transport, Extracellular
[c] : 2pg <==> h2o + pep
Glycolysis/Gluconeogenesis
4.2.1.11
etoh[e] + h[e] <==> etoh[c] + h[c]
Transport, Extracellular
[e] : ac <==>
Exchange
[e] : acald <==>
Exchange
[e] : akg <==>
Exchange
[e] : co2 <==>
Exchange
[e] : etoh <==>
Exchange
[e] : for <==>
Exchange
[e] : fru <==>
Exchange
[e] : fum <==>
Exchange
[e] : glc-D <==>
Exchange
[e] : gln-L <==>
Exchange
[e] : glu-L <==>
Exchange
[e] : h <==>
Exchange
[e] : h2o <==>
Exchange
[e] : lac-D <==>
Exchange
[e] : mal-L <==>
Exchange
[e] : nh4 <==>
Exchange
[e] : o2 <==>
Exchange
[e] : pi <==>
Exchange
[e] : pyr <==>
Exchange
[e] : succ <==>
Exchange
[c] : fdp <==> dhap + g3p
Glycolysis/Gluconeogenesis
4.1.2.13
[c] : fdp + h2o --> f6p + pi
Glycolysis/Gluconeogenesis
3.1.3.11
for[e] + h[e] --> for[c] + h[c]
Transport, Extracellular
for[c] --> for[e]
Transport, Extracellular
[c] : fum + q8h2 --> q8 + succ
Oxidative Phosphorylation
1.3.99.1
fru[e] + pep[c] --> f6p[c] + pyr[c]
Transport, Extracellular

[c] : fum + h2o <==> mal-L

fum[e] + (2) h[e] --> fum[c] + (2) h[c]
[c] : g6p + nadp <==> 6pgl + h + nadph
[c] : g3p + nad + pi <==> 13dpg + h + nadh
glc-D[e] + pep[c] --> g6p[c] + pyr[c]
[c] : atp + glu-L + nh4 --> adp + gln-L + h + pi
atp[c] + gln-L[e] + h2o[c] --> adp[c] + gln-L[c] + h[c] + pi[c]
[c] : glu-L + h2o + nadp <==> akg + h + nadph + nh4
[c] : gln-L + h2o --> glu-L + nh4
[c] : akg + gln-L + h + nadph --> (2) glu-L + nadp
glu-L[e] + h[e] <==> glu-L[c] + h[c]
[c] : 6pgc + nadp --> co2 + nadph + ru5p-D
h2o[e] <==> h2o[c]
[c] : icit + nadp <==> akg + co2 + nadph
[c] : icit --> glx + succ
[c] : lac-D + nad <==> h + nadh + pyr
[c] : accoa + glx + h2o --> coa + h + mal-L
(2) h[e] + mal-L[e] --> (2) h[c] + mal-L[c]
[c] : mal-L + nad <==> h + nadh + oaa
[c] : mal-L + nad --> co2 + nadh + pyr
[c] : mal-L + nadp --> co2 + nadph + pyr
(4) h[c] + nadh[c] + q8[c] --> (3) h[e] + nad[c] + q8h2[c]
[c] : nad + nadph --> nadh + nadp
nh4[e] <==> nh4[c]
o2[e] <==> o2[c]
[c] : coa + nad + pyr --> accoa + co2 + nadh
[c] : atp + f6p --> adp + fdp + h
[c] : coa + pyr --> accoa + for
[c] : g6p <==> f6p
[c] : 3pg + atp <==> 13dpg + adp
[c] : 6pgl + h2o --> 6pgc + h
[c] : 2pg <==> 3pg
h[e] + pi[e] <==> h[c] + pi[c]
[c] : co2 + h2o + pep --> h + oaa + pi
[c] : atp + oaa --> adp + co2 + pep
[c] : atp + h2o + pyr --> amp + (2) h + pep + pi
[c] : accoa + pi <==> actp + coa
[c] : adp + h + pep --> atp + pyr
h[e] + pyr[e] <==> h[c] + pyr[c]
[c] : ru5p-D <==> xu5p-D
[c] : r5p <==> ru5p-D
(2) h[e] + succ[e] --> (2) h[c] + succ[c]
h[e] + succ[c] --> h[c] + succ[e]
[c] : q8 + succ --> fum + q8h2
[c] : atp + coa + succ <==> adp + pi + succoa
[c] : g3p + s7p <==> e4p + f6p
(2) h[e] + nadh[c] + nadp[c] --> (2) h[c] + nad[c] + nadph[c]

Citric Acid Cycle

4.2.1.2
Transport, Extracellular
Pentose Phosphate Pathway
1.1.1.49
Glycolysis/Gluconeogenesis
1.2.1.12
Transport, Extracellular
Glutamate Metabolism
6.3.1.2
Transport, Extracellular
Glutamate Metabolism
1.4.1.4
Glutamate Metabolism
3.5.1.2
Glutamate Metabolism
1.4.1.13
Transport, Extracellular
Pentose Phosphate Pathway
1.1.1.44
Transport, Extracellular
Citric Acid Cycle
1.1.1.42
Anaplerotic reactions
4.1.3.1
Pyruvate Metabolism
1.1.1.28
Anaplerotic reactions
4.1.3.2
Transport, Extracellular
Citric Acid Cycle
1.1.1.37
Anaplerotic reactions
1.1.1.38
Anaplerotic reactions
1.1.1.40
Oxidative Phosphorylation
1.6.5.3
Oxidative Phosphorylation
1.6.1.2
Inorganic Ion Transport and Metabolism
Transport, Extracellular
Glycolysis/Gluconeogenesis
Glycolysis/Gluconeogenesis
2.7.1.11
Pyruvate Metabolism
Glycolysis/Gluconeogenesis
5.3.1.9
Glycolysis/Gluconeogenesis
2.7.2.3
Pentose Phosphate Pathway
3.1.1.31
Glycolysis/Gluconeogenesis
5.4.2.1
Inorganic Ion Transport and Metabolism
Anaplerotic reactions
4.1.1.31
Anaplerotic reactions
4.1.1.49
Glycolysis/Gluconeogenesis
2.7.9.2
Pyruvate Metabolism
2.3.1.8
Glycolysis/Gluconeogenesis
2.7.1.40
Transport, Extracellular
Pentose Phosphate Pathway
5.1.3.1
Pentose Phosphate Pathway
5.3.1.6
Transport, Extracellular
Transport, Extracellular
Oxidative Phosphorylation
1.3.99.1
Citric Acid Cycle
6.2.1.5
Pentose Phosphate Pathway
2.2.1.2
Oxidative Phosphorylation
1.6.1.1

[c] : r5p + xu5p-D <==> g3p + s7p

[c] : e4p + xu5p-D <==> f6p + g3p
[c] : dhap <==> g3p

Pentose Phosphate Pathway

Pentose Phosphate Pathway
Glycolysis/Gluconeogenesis

2.2.1.1
2.2.1.1
5.3.1.1

delta G (pH 7.2)

-4.4
0.0

Keq

vss (Gur = -10, O2ur = -1000)

vss (Gur = -10, O2ur = 0)

1.66E+03
0
-8.2798
1.00E+00
0
0
4.3
7.1204E-04
0
-8.5032
1.5
7.98E-02
6.0072
0.2284
-0.2
1.40E+00
6.0072
0.2284
0.0
1.0000E+00
0
-8.5032
-0.1
1.1836E+00
0
0
-8.3
1.1896E+06
5.0644
0
0.0
1.0000E+00
0
0
6.0
4.06E-05
0
-8.2798
-6.6
6.7770E+04
8.39
8.39
6.6
1.4756E-05
45.514
-5.4518
050) g6p + (0.2557) gln-L + (4.9414) glu-L + (59.8100) h2o + (3.5470) nad + (13.0279)
0.8739 nadph + (1.7867) oaa
0.2117
+ (0.5191) pep + (2.8328) pyr +
0.0
1.0000E+00
-22.8098
0.3775
-8.6
1.9724E+06
6.0072
0.2284
-37.2
1.6962E+27
43.5989
0
0.0
1.0000E+00
0
0
-0.9
4.5580E+00
14.7161
19.1207
0.0
1.0000E+00
0
-8.2798
0
8.5032
0
0
0
0
22.8098
-0.3775
0
8.2798
0
17.804
0
0
0
0
-10
-10
0
0
0
0
17.5309
30.5532
29.1758
-7.1155
0
0
0
0
-4.7653
-1.1542
-21.7995
0
-3.2149
-0.7786
0
0
0
0
4.2
8.4276E-04
7.4774
9.7895
-2.8
1.1208E+02
0
0
0.0
1.00E+00
0
0
0.0
1.00E+00
0
17.804
5.9
4.80116E-05
0
0
-9.1
4.58E+06
0
0

-0.6
0.0
-1.6
-0.1
-9.1
-1.7
-6.6
9.3
-4.9
-14.2
0.0
0.9
0.0
3.4
4.9
6.4
-8.7

0.0
6.4
1.3
1.6

-17.4
-0.3
0.0
0.0
-8.3
-3.8
-5.1
-0.8
2.8
-5.1
0.0
0.0
-6.8
0.2
-1.2
3.8
-5.3
0.0
0.0
0.5
0.0
0.0

-2.1
-1.0
-1.7
0.3

2.7491E+00
1.0000E+00
1.4831E+01
1.1836E+00
4.5812E+06
1.7553E+01
6.7770E+04
1.5582E-07
3.8608E+03
2.4777E+10
1.0000E+00
2.1939E-01
1.0000E+00
3.2455E-03
2.5901E-04
2.0671E-05
2.3345E+06
1.00E+00
2.0671E-05
1.1180E-01
6.7428E-02
5.45E+12
1.6580E+00
1.0000E+00
1.0000E+00
1.1896E+06
6.0465E+02
5.4085E+03
3.8511E+00
8.9221E-03
5.4085E+03
1.0000E+00
1.0000E+00
9.4936E+04
7.1385E-01
7.5574E+00
1.6538E-03
7.5765E+03
1.0000E+00
1.0000E+00
4.3054E-01
1.0000E+00
1.0000E+00
34.44673879
5.3948E+00
1.7553E+01
6.0313E-01

5.0644
0
4.96
16.0235
10
0.2235
0
-4.5419
0
0
0
4.96
-29.1758
6.0072
0
0
0
0
5.0644
0
0
38.5346
0
4.7653
21.7995
9.2825
7.4774
0
4.8609
-16.0235
4.96
-14.7161
3.2149
2.5043
0
0
0
1.7582
0
2.6785
-2.2815
0
0
5.0644
-5.0644
1.497
0

0
0
0
19.4373
10
0.0541
0
-1.1
0
0
0
0
7.1155
0.2284
0
0
0
0
0
0
0
0
0
1.1542
0
0.0007
9.7895
17.804
9.9566
-19.4373
0
-19.1207
0.7786
0.6065
0
0
8.5032
8.4043
0
-0.1521
-0.1521
0
0
0
0
-0.0379
3.6292

1.9
-1.7
1.4

4.0667E-02
1.7553E+01
9.4457E-02

1.497
1.1815
7.4774

-0.0379
-0.1143
9.7895

proteinGeneAssociation
geneAssociation
( MhpF (b0351) ) or ( AdhE (b1241) )
( b0351 or b1241 )
SPONTANEOUS (s0001)
s0001
( TdcD (b3115) ) or ( AckA (b2296) ) or ( PurT (b1849)
( b3115
)
or b2296 or b1849 )
( AcnB (b0118) ) or ( AcnA (b1276) )
( b0118 or b1276 )
( AcnB (b0118) ) or ( AcnA (b1276) )
( b0118 or b1276 )
Adk (b0474)
b0474
( LpdA (b0116) and SucAec (b0726) and SucBec (b0727)
( b0116) and b0726 and b0727 )
KgtPec (b2587)
b2587
( FrmA (b0356) ) or ( AdhP (b1478) ) or ( AdhE (b1241)
( b0356
) or b1478 or b1241 )

( AtpF0 ( b3736 and b3737 and b3738 ) and AtpF1 (( b3731

( ( b3736
andand
b3732
b3737
and b3733
and b3738
and b3734
) and and
( b3731
b3735and
) ) b3732
or ( AtpF0
and( b3736
b3733
SPONTANEOUS (s0001)
s0001
GltA (b0720)
b0720
( CbdAB ( b0978 and b0979 ) ) or ( CydA ( b0733 and
( (b0734
b0978) and
) b0979 ) or ( b0733 and b0734 ) )
( LldP (b3603) ) or ( GlcA (b2975) )
( b3603 or b2975 )
Eno (b2779)
b2779

( FbaB (b2097) ) or ( B1773 (b1773) ) or ( FbaA (b2925)

( b2097
) or b1773 or b2925 )
( GlpX (b3925) ) or ( Fbp (b4232) )
( b3925 or b4232 )
( FocA (b0904) ) or ( FocB (b2492) )
( b0904 or b2492 )
( FocA (b0904) ) or ( FocB (b2492) )
( b0904 or b2492 )
Frd ( b4151 and b4152 and b4153 and b4154 )
( b4151 and b4152 and b4153 and b4154 )
( ManX (b1817) and ManY (b1818) and ManZ (b1819)
( b1817
and and
PtsH b1818
(b2415)and
andb1819
PtsI (b2416)
and b2415
)
and b2416 )

( FumA (b1612) ) or ( FumB (b4122) ) or ( FumCec (b1611)

( b1612 )or b4122 or b1611 )
DctA (b3528)
b3528
Zwf (b1852)
b1852
GapA (b1779)
b1779
( Crr (b2417) and PtsG (b1101) and PtsH (b2415) and
( ( b2417
PtsI (b2416)
and b1101
) or ( ManX
and b2415
(b1817)
andand
b2416
ManY
) (b1818)
or ( b1817
andand
ManZ
b1818
(b181a
( GlnA (b3870) ) or ( YcjK (b1297) )
( b3870 or b1297 )
( GlnHec (b0811) and GlnPec (b0810) and GlnQec (b0809)
( b0811 )and b0810 and b0809 )
GdhA (b1761)
b1761
( PabBec (b1812) ) or ( YbaS (b0485) ) or ( YneH (b1524)
( b1812) or b0485 or b1524 )
GltB ( b3212 and b3213 )
( b3212 and b3213 )
GltP (b4077)
b4077
Gnd (b2029)
b2029
( AqpZ (b0875) ) or ( SPONTANEOUS (s0001) )
( b0875 or s0001 )
Icd (b1136)
b1136
AceA (b4015)
b4015
( Dld (b2133) ) or ( Ldh (b1380) )
( b2133 or b1380 )
( AceB (b4014) ) or ( GlcB (b2976) )
( b4014 or b2976 )
DctA (b3528)
b3528
Mdh (b3236)
b3236
Sfc (b1479)
b1479
Mae (b2463)
b2463
Nuo ( b2276 and b2277 and b2278 and b2279 and b2280
( b2276and
and
b2281
b2277
andand
b2282
b2278
and b2283
and b2279
and b2284
and b2280
and b2285
and and
b2281
b2286
and
( SthA (b3962) ) or ( Pnt ( b1602 and b1603 ) )
( b3962 or ( b1602 and b1603 ) )
( SPONTANEOUS (s0001) ) or ( AmtB (b0451) )
( s0001 or b0451 )
SPONTANEOUS (s0001)
s0001
( AceEec (b0114) and AceFec (b0115) and LpdA (b0116)
( b0114) and b0115 and b0116 )
( PfkA (b3916) ) or ( PfkB (b1723) )
( b3916 or b1723 )
( PflBec ( b0902 and b0903 ) and YfiD (b2579) ) or ( PflBec
( ( b0902
( b0902
and and
b0903
b0903
) and
) )b2579
or ( TdcEec
) or (( b0902
b0902 and
and b3114
b0903)) )or
or ( PflDe
b090
Pgi (b4025)
b4025
Pgk (b2926)
b2926
Pgl (b0767)
b0767
( YibO (b3612) ) or ( GpmB (b4395) ) or ( GpmA (b0755)
( b3612
) or b4395 or b0755 )
( PitBec (b2987) ) or ( PitA (b3493) )
( b2987 or b3493 )
Ppc (b3956)
b3956
Pck (b3403)
b3403
Ppsa (b1702)
b1702
( Pta (b2297) ) or ( EutD (b2458) )
( b2297 or b2458 )
( Pyka (b1854) ) or ( Pykf (b1676) )
( b1854 or b1676 )
( Rpeec (b3386) ) or ( SgcE (b4301) )
( RpiA (b2914) ) or ( RpiB (b4090) )
DctA (b3528)

( b3386 or b4301 )
( b2914 or b4090 )
b3528

Sdh ( b0721 and b0722 and b0723 and b0724 )

SucCD ( b0728 and b0729 )
( TalA (b2464) ) or ( TalB (b0008) )
Pnt ( b1602 and b1603 )

( b0721
( b0728
( b2464
( b1602

and b0722 and b0723 and b0724 )

and b0729 )
or b0008 )
and b1603 )

( TktA (b2935) ) or ( TktB (b2465) )

( TktA (b2935) ) or ( TktB (b2465) )
Tpi (b3919)

( b2935 or b2465 )
( b2935 or b2465 )
b3919

proteinAssociation
( MhpF ) or ( AdhE )
SPONTANEOUS
( TdcD ) or ( AckA ) or ( PurT )
( AcnB ) or ( AcnA )
( AcnB ) or ( AcnA )
Adk
( LpdA and SucAec and SucBec )
KgtPec
( FrmA ) or ( AdhP ) or ( AdhE )
( AtpF0 and AtpF1 ) or ( AtpF0 and AtpF1 and AtpI )
SPONTANEOUS
GltA
( CbdAB ) or ( CydA )
( LldP ) or ( GlcA )
Eno

( FbaB ) or ( B1773 ) or ( FbaA )

( GlpX ) or ( Fbp )
( FocA ) or ( FocB )
( FocA ) or ( FocB )
Frd
( ManX and ManY and ManZ and PtsH and PtsI )

( FumA ) or ( FumB ) or ( FumCec )

DctA
Zwf
GapA
( Crr and PtsG and PtsH and PtsI ) or ( ManX and ManY and ManZ and PtsH and PtsI ) or ( Crr and MalX and PtsH and PtsI )
( GlnA ) or ( YcjK )
( GlnHec and GlnPec and GlnQec )
GdhA
( PabBec ) or ( YbaS ) or ( YneH )
GltB
GltP
Gnd
( AqpZ ) or ( SPONTANEOUS )
Icd
AceA
( Dld ) or ( Ldh )
( AceB ) or ( GlcB )
DctA
Mdh
Sfc
Mae
Nuo
( SthA ) or ( Pnt )
( SPONTANEOUS ) or ( AmtB )
SPONTANEOUS
( AceEec and AceFec and LpdA )
( PfkA ) or ( PfkB )
( PflBec and YfiD ) or ( PflBec ) or ( TdcEec ) or ( PflDec )
Pgi
Pgk
Pgl
( YibO ) or ( GpmB ) or ( GpmA )
( PitBec ) or ( PitA )
Ppc
Pck
Ppsa
( Pta ) or ( EutD )
( Pyka ) or ( Pykf )
( Rpeec ) or ( SgcE )
( RpiA ) or ( RpiB )
DctA
Sdh
SucCD
( TalA ) or ( TalB )
Pnt

( TktA ) or ( TktB )
( TktA ) or ( TktB )
Tpi

MalX and PtsH and PtsI )

abbreviation

min

ACALD
-1000
ACALDt
-1000
ACKr
-1000
ACONTa
-1000
ACONTb
-1000
ACt2r
-1000
ADK1
-1000
AKGDH
0
AKGt2r
-1000
ALCD2x
-1000
ATPM
8.39
ATPS4r
-1000
Biomass_Ecoli_core_w/GAM
0
CO2t
-1000
CS
0
CYTBD
0
D-LACt2
-1000
ENO
-1000
ETOHt2r
-1000
EX_ac(e)
0
EX_acald(e)
0
EX_akg(e)
0
EX_co2(e)
-1000
EX_etoh(e)
0
EX_for(e)
0
EX_fru(e)
0
EX_fum(e)
0
EX_glc(e)
-10
EX_gln_L(e)
0
EX_glu_L(e)
0
EX_h(e)
-1000
EX_h2o(e)
-1000
EX_lac_D(e)
0
EX_mal_L(e)
0
EX_nh4(e)
-1000
EX_o2(e)
-1000
EX_pi(e)
-1000
EX_pyr(e)
0
EX_succ(e)
0
FBA
-1000
FBP
0
FORt2
0
FORti
0
FRD7
0
FRUpts2
0
FUM
-1000

max

objective

1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000

0
0
0
0
0
0
0
0
0
0
0
0
1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

FUMt2_2
G6PDH2r
GAPD
GLCpts
GLNS
GLNabc
GLUDy
GLUN
GLUSy
GLUt2r
GND
H2Ot
ICDHyr
ICL
LDH_D
MALS
MALt2_2
MDH
ME1
ME2
NADH16
NADTRHD
NH4t
O2t
PDH
PFK
PFL
PGI
PGK
PGL
PGM
PIt2r
PPC
PPCK
PPS
PTAr
PYK
PYRt2r
RPE
RPI
SUCCt2_2
SUCCt3
SUCDi
SUCOAS
TALA
THD2
TKT1

0
-1000
-1000
0
0
0
-1000
0
0
-1000
0
-1000
-1000
0
-1000
0
0
-1000
0
0
0
0
-1000
-1000
0
0
0
-1000
-1000
0
-1000
-1000
0
0
0
-1000
0
-1000
-1000
-1000
0
0
0
-1000
-1000
0
-1000

1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000
1000

0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

TKT2
TPI

-1000
-1000

1000
1000

0
0

abbreviation officialName
13dpg
3-Phospho-D-glyceroyl phosphate
2pg
D-Glycerate 2-phosphate
3pg
3-Phospho-D-glycerate
6pgc
6-Phospho-D-gluconate
6pgl
6-phospho-D-glucono-1,5-lactone
ac
Acetate
ac[e]
Acetate (extracellular)
acald
Acetaldehyde
acald[e]
Acetaldehyde (extracellular)
accoa
Acetyl-CoA
acon-C
cis-Aconitate
actp
Acetyl phosphate
adp
ADP
akg
2-Oxoglutarate
akg[e]
2-Oxoglutarate (extracellular)
amp
AMP
atp
ATP
cit
Citrate
co2
CO2
co2[e]
CO2 (extracellular)
coa
Coenzyme A
dhap
Dihydroxyacetone phosphate
e4p
D-Erythrose 4-phosphate
etoh
Ethanol
etoh[e]
Ethanol (extracellular)
f6p
D-Fructose 6-phosphate
fdp
D-Fructose 1,6-bisphosphate
for
Formate
for[e]
Formate (extracellular)
fru[e]
D-Fructose (extracellular)
fum
Fumarate
fum[e]
Fumarate (extracellular)
g3p
Glyceraldehyde 3-phosphate
g6p
D-Glucose 6-phosphate
glc-D[e]
D-Glucose (extracellular)
gln-L
L-Glutamine
gln-L[e]
L-Glutamine (extracellular)
glu-L
L-Glutamate
glu-L[e]
L-Glutamate (extracellular)
glx
Glyoxylate
h2o
H2O
h2o[e]
H2O (extracellular)
h
H+
h[e]
H+ (extracellular)
icit
Isocitrate
lac-D
D-Lactate

formula
charge
C3H4O10P2
C3H4O7P
C3H4O7P
C6H10O10P
C6H9O9P
C2H3O2
C2H3O2
C2H4O
C2H4O
C23H34N7O17P3S
C6H3O6
C2H3O5P
C10H12N5O10P2
C5H4O5
C5H4O5
C10H12N5O7P
C10H12N5O13P3
C6H5O7
CO2
CO2
C21H32N7O16P3S
C3H5O6P
C4H7O7P
C2H6O
C2H6O
C6H11O9P
C6H10O12P2
CH1O2
CH1O2
C6H12O6
C4H2O4
C4H2O4
C3H5O6P
C6H11O9P
C6H12O6
C5H10N2O3
C5H10N2O3
C5H8NO4
C5H8NO4
C2H1O3
H2O
H2O
H
H
C6H5O7
C3H5O3

-4
-3
-3
-3
-2
-1
-1
0
0
-4
-3
-2
-3
-2
-2
-2
-4
-3
0
0
-4
-2
-2
0
0
-2
-4
-1
-1
0
-2
-2
-2
-2
0
0
0
-1
-1
-1
0
0
1
1
-3
-1

casNumber
38168-82-0
None
None
None
None
71-50-1
71-50-1
75-07-0
75-07-0
72-89-9
585-84-2
19926-71-7
58-64-0
328-50-7
328-50-7
61-19-8
56-65-5
77-92-9
124-38-9
124-38-9
85-61-0
57-04-5
585-18-2
64-17-5
64-17-5
643-13-0
488-69-7
64-18-6
64-18-6
57-48-7
110-17-8
110-17-8
142-10-9
56-73-5
50-99-7
56-85-9
56-85-9
56-86-0
56-86-0
298-12-4
7732-18-5
7732-18-5
12408-02-5
12408-02-5
30810-51-6
10326-41-7

lac-D[e]
mal-L
mal-L[e]
nad
nadh
nadp
nadph
nh4
nh4[e]
o2
o2[e]
oaa
pep
pi
pi[e]
pyr
pyr[e]
q8
q8h2
r5p
ru5p-D
s7p
succ
succ[e]
succoa
xu5p-D

D-Lactate (extracellular)
C3H5O3
L-Malate
C4H4O5
L-Malate (extracellular)
C4H4O5
Nicotinamide adenine dinucleotide
C21H26N7O14P2
Nicotinamide adenine dinucleotide - reduced C21H27N7O14P2
Nicotinamide adenine dinucleotide phosphate C21H25N7O17P3
Nicotinamide adenine dinucleotide phosphate - reduced
C21H26N7O17P3
Ammonium
H4N
Ammonium (extracellular)
H4N
O2
O2
O2 (extracellular)
O2
Oxaloacetate
C4H2O5
Phosphoenolpyruvate
C3H2O6P
Phosphate
HO4P
Phosphate (extracellular)
HO4P
Pyruvate
C3H3O3
Pyruvate (extracellular)
C3H3O3
Ubiquinone-8
C49H74O4
Ubiquinol-8
C49H76O4
alpha-D-Ribose 5-phosphate
C5H9O8P
D-Ribulose 5-phosphate
C5H9O8P
Sedoheptulose 7-phosphate
C7H13O10P
Succinate
C4H4O4
Succinate (extracellular)
C4H4O4
Succinyl-CoA
C25H35N7O19P3S
D-Xylulose 5-phosphate
C5H9O8P

-1
-2
-2
-1
-2
-3
-4
1
1
0
0
-2
-3
-2
-2
-1
-1
0
0
-2
-2
-2
-2
-2
-5
-2

10326-41-7
97-67-6
97-67-6
53-84-9
58-68-4
53-59-8
2646-71-1
14798-03-9
14798-03-9
7782-44-7
7782-44-7
328-42-7
138-08-9
14265-44-2
14265-44-2
127-17-3
127-17-3
1339-63-5
56275-39-9
4300-28-1
4151-19-3
None
110-15-6
110-15-6
604-98-8
None

formulaNeutral
C3H8O10P2
C3H7O7P
C3H7O7P
C6H13O10P
C6H11O9P
C2H4O2
C2H4O2

C23H38N7O17P3S
C6H6O6
C2H5O5P
C10H15N5O10P2
C5H6O5
C5H6O5
C10H14N5O7P
C10H16N5O13P3
C6H8O7

C21H36N7O16P3S
C3H7O6P
C4H9O7P

C6H13O9P
C6H14O12P2
CH2O2
CH2O2
C4H4O4
C4H4O4
C3H7O6P
C6H13O9P
C5H10N2O3
C5H10N2O3
C5H9NO4
C5H9NO4
C2H2O3

C6H8O7
C3H6O3

CompoundNames
KeggID
1,3-bis-phosphoglycerate/ 3-Phospho-D-glyceroyl phosphate/ (R)-2-Hydroxy-3-(phosphonooxy)-1-mon
C00236
2-phosphoglyceric acid/ 2-Phospho-D-glycerate
C00631
D-Glycerate 3-phosphate/ 3-Phosphoglycerate/ 3-phosphoglyceric acid
C00197
6-phosphogluconic acid/ D-gluconate 6-phosphate
C00345
D-Glucono-1,5-lactone 6-phosphate
C01236
vinegar/ Ethylic acid/ Vinegar acid/ Methanecarboxylic acid/ Acetic acid/
C00033
Ethanoic acid
vinegar/ Ethylic acid/ Vinegar acid/ Methanecarboxylic acid/ Acetic acid/
C00033
Ethanoic acid
Ethanal/ Aldehyde C(2)/ acetylaldehyde/ Aceteldehyde/ Acetic aldehyde/
C00084
Ethyl aldehyde/ Aldehyde
Ethanal/ Aldehyde C(2)/ acetylaldehyde/ Aceteldehyde/ Acetic aldehyde/
C00084
Ethyl aldehyde/ Aldehyde
Acetyl coenzyme A
C00024
cis-1,2,3-Propenetricarboxylic acid/ (Z)-1-Propene-1,2,3-tricarboxylic C00417
acid/ cis-Aconitic acid
C00227
Adenosine 5'-diphosphate
C00008
Oxoglutaric acid/ 2-Ketoglutaric acid/ alpha-Ketoglutarate/ alpha-Ketoglutaric
C00026 Acid
Oxoglutaric acid/ 2-Ketoglutaric acid/ alpha-Ketoglutarate/ alpha-Ketoglutaric
C00026 Acid
Adenosine 5'-monophosphate/ Adenylic acid/ Adenylate/ 5'-AMP/ 5'-Adenylic
C00020 acid/ 5'-Adenosine mon
Adenosine 5'-triphosphate/ 5'-adenylate triphosphate
C00002
Citric acid/ 2-Hydroxytricarballylic acid/ 2/ 2-Hydroxy-1/ 3-propanetricarboxylic
C00158 acid
Carbonic anhydride/ Carbon dioxide
C00011
Carbonic anhydride/ Carbon dioxide
C00011
CoA/ CoA-SH/ CoASH
C00010
Glycerone phosphate
C00111
4-phospho D-erythrose
C00279
Ethyl alcohol/ Methylcarbinol
C00469
Ethyl alcohol/ Methylcarbinol
C00469
D-Fructose 6-phosphoric acid/ Neuberg ester/ beta-D-Fructose 6-phosphate
C00085
fructose-1,6-bisphosphate/ fructose diphosphate/ beta-D-fructofuranose-1,6-diphosphate/
C00354
fbp
Methanoic acid/ Formic acid/ Hydrogencarboxylic acid/ aminic acid C00058
Methanoic acid/ Formic acid/ Hydrogencarboxylic acid/ aminic acid C00058
Levulose/ Fruit sugar/ D-Arabino-hexulose
C00095
boletic acid/ allomaleic acid/ Fumaric acid/ Trans-butenedioic acid C00122
boletic acid/ allomaleic acid/ Fumaric acid/ Trans-butenedioic acid C00122
D-glyceraldehyde 3-phosphate/ (2R)-2-Hydroxy-3-(phosphonooxy)-propanal
C00661
Glucose 6-phosphate/ Robinson ester/ alpha-D-Glucose 6-phosphateC00092
Grape sugar/ Dextrose/ alpha-D-Glucose/ beta-D-Glucose/ Glucose C00031
L-2-Aminoglutaramic acid/ Gln
C00064
L-2-Aminoglutaramic acid/ Gln
C00064
L-Glutamic acid/ L-Glutaminic acid/ Glu
C00025
L-Glutamic acid/ L-Glutaminic acid/ Glu
C00025
Glyoxalate/ Glyoxylic acid/ Acetic acid
C00048
Water/ Dihydrogen oxide
C00001
Water/ Dihydrogen oxide
C00001
Hydrogen Ion/ Proton
C00080
Hydrogen Ion/ Proton
C00080
Isocitric acid/ 1-Hydroxytricarballylic acid/ 2/ 3-tricarboxylic acid/ 1-Hydroxypropane-1
C00311
(R)-Lactate/ D-Lactic acid/ D-2-Hydroxypropanoic acid/ D-2-Hydroxypropionic
C00256 acid

C3H6O3
C4H6O5
C4H6O5
C21H28N7O14P2
C21H29N7O14P2
C21H30N7O17P3
H3N
H3N

C4H4O5
C3H5O6P
H3O4P
H3O4P
C3H4O3
C3H4O3

C5H11O8P
C5H11O8P
C7H15O10P
C4H6O4
C4H6O4
C25H40N7O19P3S
C5H11O8P

(R)-Lactate/ D-Lactic acid/ D-2-Hydroxypropanoic acid/ D-2-Hydroxypropionic

C00256 acid
(S)-Malate/ L-Apple acid/ L-Malic acid/ L-2-Hydroxybutanedioic acid/ C00149
Malate
(S)-Malate/ L-Apple acid/ L-Malic acid/ L-2-Hydroxybutanedioic acid/ C00149
Malate
NAD+/ NAD/ beta-Diphosphopyridine Nucleotide/ beta-NAD/ beta-Nicotinamide
C00003
adenine dinucleotide
DPNH/ NADH
C00004
NADP/ beta-Nicotinamide adenine dinucleotide phosphate/ NADP+ C00006
TPNH/ beta-triphosphopyridine nucleotide/ NADPH
C00005
NH3
C01342
NH3
C01342
Oxygen/ dioxygen
C00007
Oxygen/ dioxygen
C00007
Oxalacetic acid/ Oxaloacetic acid/ 2-oxobutanedioic acid/ OxosuccinicC00036
acid
Phosphoenolpyruvic acid/ PEP
C00074
Pi/ Orthophosphate/ Phosphoric acid
C00009
Pi/ Orthophosphate/ Phosphoric acid
C00009
Pyruvic acid/ 2-Oxopropanoate/ 2-Oxopropanoic acid/ Pyroracemic acid/
C00022
alpha-Ketopropionic acid/ 2Pyruvic acid/ 2-Oxopropanoate/ 2-Oxopropanoic acid/ Pyroracemic acid/
C00022
alpha-Ketopropionic acid/ 2Coenzyme Q, CoQ, Q
C00399
QH2, CoQH2
C00390
D-Ribose 5-phosphate/ D-Ribose-5-phosphate/ Ribose 5-phosphate C00117
C00199
altro-Heptulose 7-phosphate
C00281
Succinic acid/ Butanedionic acid/ Ethylenesuccinic acid
C00042
Succinic acid/ Butanedionic acid/ Ethylenesuccinic acid
C00042
Succinyl coenzyme A/ succino-1-yl-coenzymeA
C00091
C00231