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Figure 1 : Binuclear metal ion center in GpdQ. The site containing a metal ion is more tightly bound than site. With
the introduction of a substrate, the site undergoes a conformational change which increases its affinity for metal ions,
making it catalytically active.
Figure 2 : Proposed reaction mechanism for GpdQ. Binding with the substrate causes the -Asn80 bond to break, the
bridging hydroxide activates a terminally bound nucleophile.
Figure 3 : Sequential (GpdQ) vs. processive (PAP) mechanism. GpdQ releases the substrate after cleaving only one ester
bond. PAP uses two nucleophiles to cleave the diester bond and the product of the first hydrolysis remains associated
with the site.
References
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