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Letters: Division and Apoptosis of E2f-Deficient Retinal Progenitors
Letters: Division and Apoptosis of E2f-Deficient Retinal Progenitors
1038/nature08544
LETTERS
Division and apoptosis of E2f-deficient retinal
progenitors
Danian Chen1, Marek Pacal1, Pamela Wenzel2, Paul S. Knoepfler3, Gustavo Leone2 & Rod Bremner1
DNA, messenger RNA and protein at various time points, all demonstrated robust E2f3 excision (Supplementary Fig. 1), yet remarkably
we observed many triple knockout Ki671 and PH31 cells at both E14
and P0 (Fig. 1a, b). The effect was slightly more pronounced at P0
than E14, and is discussed later. At E14 and E17 BrdU labelling was
weaker in triple knockout versus wild-type progenitors but many
BrdU1 cells were obvious at higher magnification, suggesting continued, albeit slower, division (Supplementary Fig. 1a). At E14 and P0
cell cycle distribution was the same in wild-type, E2f12/2 or triple
knockout retinas (Supplementary Fig. 2), suggesting lengthening of
all phases. Surprisingly, therefore, although activating E2fs contribute to progenitor expansion, robust division continues in their
absence. E2f1 is essential to drive abnormal division of Rb1-deficient
differentiating retinal neurons14, highlighting the distinct role for
activating E2fs in normal versus cancer cell cycles in the same tissue.
Mature neurons never divide, but retinal damage triggers reactive
gliosis and Muller glia mitosis. We damaged retinas either genetically
using homozygous rd1 (also called Pde6b2/2), causing photoreceptor degeneration, or by means of intravitreal toxin injection. GFAP
induction and p27Kip1 and cyclin D3 downregulation, hallmarks of
reactive gliosis15, were observed independent of E2f13
(Supplementary Fig. 3a, b and data not shown). Furthermore, the
proportion of dividing BrdU1/CRALBP1 Muller nuclei in the inner
nuclear layer was identical in control or triple knockout toxin-treated
retina (Supplementary Fig. 3c, d). Thus, both progenitors and
mature glia proliferate without activating E2fs.
Some E2f targets (for example, cyclins/Mcm3/Tk1) were downregulated in E2f12/2E2f22/2E2f32/2 triple knockout progenitors
(Fig. 2a), and we wondered if reduction of repressive E2fs (E2f48)
might explain continued division. However, whereas E2f7 and E2f8
mRNA levels were slightly down in the triple knockout retina, E2f46
levels were unaffected at E14, E2f5 and E2f6 were induced at P0
(Fig. 2a). Triple knockout fibroblasts arrest as a result of p53 induction of Cdkn1a, which encodes the cyclin-dependent kinase (Cdk)
inhibitor p21Cip1 (refs 4, 5). Notably, expression of Cdkn1a and the
related Cdkn1c (p57Kip2) were reduced in triple knockout retina
(Fig. 2b). Myc (previously c-Myc) represses the Cdkn1a promoter
in vitro16 and its overexpression bypasses arrest caused by inhibiting
E2f17,18. Because E2f inhibition in these studies targeted all E2fs, it is
unclear if Myc overrides loss of activating E2fs alone. Whether
physiological Myc levels can compensate for E2f13 in vivo is also
unknown. Notably, Mycn and Mycl1 levels were higher than Myc in
E14 retina, but the reverse applied in fibroblasts (Fig. 2c). E2f13 loss
reduced Myc levels in fibroblasts, but had no effect on Myc family
expression in retinal progenitors (Fig. 2c). To test Mycn function, the
floxed (f) locus was introduced into the triple knockout background
and recombination confirmed (Supplementary Fig. 4). Deleting
Toronto Western Research Institute, University Health Network, Departments of Ophthalmology and Visual Science, and Laboratory Medicine and Pathobiology, University of
Toronto, Ontario M5T 2S8, Canada. 2Human Cancer Genetics Program, Department of Molecular Virology, Immunology and Medical Genetics, and Department of Molecular
Genetics, Comprehensive Cancer Center, The Ohio State University, Columbus, Ohio 43210, USA. 3Departments of Cell Biology and Human Anatomy University of California Davis
School of Medicine, Davis, California 95616, USA.
925
2009 Macmillan Publishers Limited. All rights reserved
LETTERS
WT
E2f1/
E2f1/E2f2/
E2f3/
E2f2/E2f3/
E2f2/E2f3/
Mycn/
Mycn/
E2f1/E2f2/
E2f3/Mycn/
E2f1/E2f2/
E2f3/Trp53/
NBL
E14
PH3
NBL
NBL
GCL
GCL
P0
PH3
NBL
NBL
NBL
GCL
GCL
NBL
NBL
GCL
GCL
NBL
NBL
NBL
GCL
GCL
Lens
GCL
NBL
NBL
NBL
NBL
GCL
NBL
GCL
GCL
GCL
GCL
GCL
NBL
NBL
NBL
NBL
GCL
GCL
GCL
GCL
NBL
NBL
GCL
NBL
NBL
NBL
GCL
GCL
E14
Ki67
Lens
NBL
NBL
GCL
GCL
GCL
NBL
NBL
GCL
9
6
**
*
0
GCL
NBL
P0
Ki67
NBL
GCL
E14
NBL
GCL
GCL
GCL
GCL
WT
E2f1/
E2f2/E2f3/
E2f1/E2f2/E2f3/
Mycn/
E2f2/E2f3/Mycn/
E2f1/E2f2/E2f3/Mycn/
E2f1/E2f2/E2f3/Trp53/
180
120
P0
60
**
**
E14
P0
Mycn alone, or even with E2f2/3, did not affect proliferation or survival (Figs 1a, b and 3ac and data not shown; see also Supplementary
Discussion on eye size). In contrast, progenitor division was markedly
reduced in the E2f12/2E2f22/2E2f32/2Mycn2/2 quadruple knockout
peripheral retina with 12-fold or 67-fold fewer Ki671 cells than wildtype retina at E14 and P0, respectively, and the neuroblastic layer
was very thin (Fig. 1a). PH3 and BrdU analyses confirmed this
dramatic effect (Fig. 1a, b, and data not shown). To address cell autonomy in Mycn/E2f13 redundancy, Cre retrovirus co-expressing
green fluorescent protein (GFP) (Supplementary Fig. 5) was injected
subretinally into newborn mice and clone size analysed at P21. The
150
WT E14 retina
E2f1/E2f2/E2f3/
E14 retina
120
60
0
Myc
Mycn Mycl1
C
c
n1
dk
C
0.1
180
dk
n2
b
n1
dk
C
a
C
dk
E14
P0
n1
f7
E2
E2
f6
E2
f4
f5
E2
E2
0.1
E14 E2f1/E2f2/E2f3/
E14 E2f1/E2f2/E2f3/Mycn/
f8
5
cm
3
Po
la
1
Tk
1
M
Fb
0.01
c
10
xo
dk
C
e2
dc
C
cn
e1
b2
C
cn
a2
cn
C
cn
C
E2f1/E2f2/E2f3/ mRNA
relative to WT
10
mRNA relative to WT
Arbitrary units
panels. Scale bar, 50 mm. WT, wild type. b, Quantification of PH31 and
Ki671 cells. GCL, ganglion cell layer; NBL, neuroblastic layer. Data in b are
mean 6 s.d. and asterisks indicate significant difference from wild type
(n 5 3). Asterisk, P , 0.05; double asterisk, P , 0.01; Students t-test.
Arbitrary units
WT fibroblasts
E2f1/E2f2/
E2f3/ fibroblasts
100
50
0
Myc
Mycn Mycl1
926
2009 Macmillan Publishers Limited. All rights reserved
LETTERS
were reduced in the E2f12/2E2f22/2E2f32/2 retina, they were upregulated in E2f12/2E2f22/2E2f32/2Mycn2/2 retina (Fig. 2b, Supplementary Fig. 7 and Supplementary Discussion). Thus, Mycn
promotes division of E2f12/2E2f22/2E2f32/2 progenitors cell autonomously and maintains E2f target expression while repressing Cdk
inhibitors.
Because E2f13 are non-essential for division, we considered other
roles. Activating E2fs are pro-apoptotic19, but at E14 and E17 E2f13
loss did not affect low background apoptosis, yet remarkably, apoptosis was elevated in postnatal E2f12/2E2f22/2E2f32/2 retina, and
could be suppressed by any single activating E2f (Fig. 3ac and
Supplementary Fig. 8). By P8, when progenitor division has ended,
apoptosis was normal (Supplementary Fig. 8ac). Labelling with
TdT-mediated dUTP nick end labelling (TUNEL) and BrdU showed
that apoptotic E2f12/2E2f22/2E2f32/2 cells were progenitors (Supplementary Fig. 9). This phenotype may explain the greater reduction
in progenitors at P0 versus E14 (Fig. 1a, b). Thus, activating E2fs have
an unexpected pro-survival role during retinal development.
In flies, E2f1 protects some irradiated cells by repressing proapoptotic hid9, but in the E2f12/2E2f22/2E2f32/2 retina the mammalian equivalents Smac/Diablo and Omi/Htra2 were downregulated
a
E2f1/
WT
NBL
E2f2/E2f3/
GCL
GCL
GCL
NBL
NBL
NBL
E2f1/E2f2/
E2f3/Trp53/
NBL
Lens
GCL
GCL
NBL
NBL
GCL
GCL
NBL
NBL
GCL
GCL
c
TUNEL+ cells per 100 m
E2f1/E2f2/
E2f3/
WT
NBL
Ac p53
Cdkn1a
P0 NBL
p19Arf
NBL
Noxa
Sirt1
Hdac1
0.1
c3
H
da
H
da
Pu
ox
a
(L
rd
d)
m
a
(B
bc
3)
c1
Pi
d
E2f1/E2f2/
E2f3/
p53
E14 NBL
P0
pp
1
E14
p7
p5
Tr
Tr
P0
WT
3
p1
9 ar
f
(C
C
dk dk
n1 n2
a)
a
E14
10
As
12
Si
rt3
**
WT
E2f1/
E2f2/E2f3/
E2f1/E2f2/E2f3/
E2f2/E2f3/Mycn/
E2f1/E2f2/E2f3/Mycn/
E2f2/E2f3/Trp53/
E2f1/E2f2/E2f3/Trp53/
**
Si
rt1
Si
rt2
18
Di
ab
lo
H
tra
2
**
pp
2
Ia
sp
p
12
GCL
GCL
GCL
As
GCL
TUNEL+ cells per total cells (%)
E2f2/E2f3/
Trp53/
NBL
GCL
NBL
TUNEL
E2f1/E2f2/
E2f3/Mycn/
NBL
NBL
GCL
P0
E2f2/E2f3/
Mycn/
GCL
TUNEL
E2f1/E2f2/
E2f3/
NBL
NBL
NBL
E14
(Fig. 3d). The E2f target p73 was also downregulated, but immunoreactivity for its relative p53 was elevated, and its pro-apoptotic target
Noxa (also called Pmaip1) was induced (Fig. 3dg). We introduced
the floxed p53 locus (Trp53f/f) into the a-CreE2f12/2E2f22/2E2f3 f/f background, confirmed recombination (Supplementary Fig. 10) and found
that whereas there was no difference in Ki671, PH31 or BrdU1 cells
in E2f12/2E2f22/2E2f32/2 versus E2f12/2E2f22/2E2f32/2Trp532/2
progenitors at E14 or P0 (Fig. 1a, b, and data not shown), apoptosis
was suppressed in E2f12/2E2f22/2E2f32/2Trp532/2 P0 progenitors
(Fig. 3ac). Although E2f12/2E2f22/2E2f32/2Mycn2/2 P0 retina had
fewer total apoptotic cells (Fig. 3ac), this was due to fewer retinal
progenitors; thus, the proportion of apoptotic (TUNEL1) dividing
(Ki671) progenitors at P0 was not reduced by Mycn loss, but was
slightly increased (Supplementary Fig. 11), consistent with the slightly
elevated Noxa expression relative to the E2f12/2E2f22/2E2f32/2 retina
(Supplementary Fig. 7). Thus, unlike in fibroblasts4, p53 does not reduce
division in E2f12/2E2f22/2E2f32/2 progenitors, but drives apoptosis,
providing and explaining the first pro-survival role for activating E2fs
in normal cells.
How do E2fs constrain p53 pro-apoptotic activity? Aspp proteins
bind p53 and promote its pro-apoptotic function, but they are
15
WT
TKO
**
Hdac3
Actb
10
5
0
E14
P0
E14
P0
0.01
LETTERS
MXIE
MXIE-Cre and
YESir2(1:4)
MXIE-Cre
E2f2/
E2f3/
E2f1/
E2f2/
E2f3f/f
TUNEL
GFP
8
Merged
E2f2/
E2f1/E2f2/
E2f2/E2f3/
E2f2/E2f3/-YESir2
E2f1/E2f2/E2f3/
E2f1/E2f2/E2f3/
YESir2
**
Sirt1
p53
Mdm2
Arf
E2f
E2f
Insufficient
Excess
Red: super-active
Grey: low/inactive
Cyclins etc
Mycn
E2f13
Sirt1
p21
Division
Noxa
Apoptosis
(Fig. 3d, g), thus the 13-fold increase in immunoreactivity may reflect
epitope exposure (Fig. 3e, f), perhaps through posttranslational modification23. E2f13 loss did not induce p53 phosphorylation (data not
shown) but increased acetylation considerably (Fig. 3g). Acetylation is
essential for p53 activity24, is mediated by Tip60, Pcaf and Cbp/p300
and is reversed by Hdacs and Sirt123. Notably, Sirt1, Sirt2, Sirt3, Hdac1
and Hdac3 mRNA was reduced in triple knockout retina, as were
protein levels of Sirt1 and Hdac1 (Fig. 3d, g). Hdac1 and Hdac3 downregulation was greater at P0 than at E14, correlating with p53 immunodetection at P0 (Fig. 3df). Sirt1 is a direct E2f1 target25, but whether
other activating E2fs sustain its expression is unknown, and a functional E2fSirt1p53 axis has not been established. Electroporating Cre
plasmid into E2f12/2E2f22/2E2f3f/f P0 retinas induced apoptosis, but
strikingly concomitant Sirt1 expression blocked cell death (Fig. 4a, b).
Moreover, treatment of pregnant dams from E16 with the Sirt1 agonist
resveratrol blocked .70% of E2f12/2E2f22/2E2f32/2 progenitor
apoptosis at P0, and this correlated with p53 deacetylation and blockade of p53-dependent Noxa induction, without affecting p19Arf
(Supplementary Fig. 12). Just as p53 loss did not influence division
(Fig. 1a, b), resveratrol did not alter cyclin levels or proliferation
(Supplementary Figs 12d and 13). In summary, activating E2fs interchangeably induce Sirt1 to block p53 acetylation and apoptosis. High
levels of E2f have long been known to activate p53 (ref. 8) and our
findings now connect low E2f to p53 activation, but through an entirely
distinct mechanism (Fig. 4c).
Activating E2fs are critical for division in flies and mammalian
fibroblasts, where they counteract repressive E2f or p53, respectively37.
We provide the first in vivo evidence that E2f13 are not indispensable
in every context. Mycn drives E2f-independent division, maintaining
expression of E2f targets and preventing p53-mediated Cdkn1a induction. In vitro overexpression studies suggested that Myc overcomes E2f
repression17,18 but did not reveal whether normal Myc levels substitute
for activating E2fs in vivo. Our genetic strategies reveal that physiological levels compensate for the activating E2fs cell autonomously.
Other studies highlight redundancy among related cell cycle regulators26. Our results indicate redundancy between unrelated cell cycle
regulators.
We also describe an unexpected pro-survival activity for E2f13 in
vivo. Loss of any two was harmless, but removing all three impaired
progenitor survival. Thus, activating E2fs have interchangeable prosurvival rolesnot only E2f1 and not only in irradiated cells9,10,12. We
define the first direct mechanism linking activating E2fs to mammalian cell survival through Sirt1 and p53. E2f13 redundantly regulates other deacetylases (Fig. 3d), which may also inhibit p53.
Integrating the Sirt1p53 and Mycn data exposes a network that
coordinates progenitor proliferation and survival (Fig. 4d). The
novel E2fSirtp53 axis could also promote survival in p531 tumour
cells. Irrespective, its importance for survival in normal cells underscores the need for care in applying E2f inhibitors to treat human
disease.
p53
Green: active
Grey: low/inactive
METHODS SUMMARY
For reactive gliosis 1.0 ml of 2 mM domoic acid and 7 mM ouabain plus 1 mM
BrdU was injected into the eyes of P16 ketamine/xylazine anaesthetized mice15.
For resveratrol, timed pregnant female mice were injected daily with 4 mg kg21
of body weight (catalogue number 60512A, AKSci) or 0.1% DMSO intraperitoneally from E16. Virus injection and electroporation were as described27.
Fixation, antibody labelling, TUNEL and quantification of sections, or dissociation and quantification of cells, and RNA and protein analysis were essentially
as described14,28. The PALM microlaser system was used for laser capture microdissection (LCM) following the manufacturers recommendations. For flow
cytometry E2f3f/f and E2f12/2E2f22/2E2f3f/f fibroblasts were infected with
MXIE or MXIRE-Cre retrovirus. E14 retinas were dissected and dissociated.
GFP1 cells were sorted using a FACSAria (Becton Dickinson). For cell cycle
analysis, cells were fixed in ice-cold 80% ethanol, counterstained with propidium
iodide and analysed with a BD FACSCalibur system. Data were collected using
CELLFIT software.
928
2009 Macmillan Publishers Limited. All rights reserved
LETTERS
Full Methods and any associated references are available in the online version of
the paper at www.nature.com/nature.
Received 13 July; accepted 25 September 2009.
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2009 Macmillan Publishers Limited. All rights reserved