Professional Documents
Culture Documents
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Abstracts FEBS'99
The ongoing doubling of the human population carries with it the inevitable
consequence of large scale global pollution and a dramatic irreversible loss of
natural territories. While looking at bow to stop this overpopulation, society
demands scientific and technological achievements so that the environmental
disasters could be limited, the food production secured and the industrial
production procedures less polluting.
Novelplants obtained through molecular marker assisted selection and
transgenesis have great potential.
Plant genome research helped to identify the 21.000 plant genes. Improved
methods for mRNA profiling and proteomics are bringing information on the
genes used in the different tissues and during certain developmental and stress
situations.
Metabolite profiling of solutes and volatiles can bring information on the
changes of enzymatic activities during altering growth conditions.
The improved analytical organic chemistry (GC-MS, CE-MS, HPLC-MS)
linked to mRNA profiling must make it possible to unravel the biosynthetic
pathway for plant secondary metabolites.
Engineering some key genes in related plant species can allow the
development of a less expensive medicare
Symposia
Abstracts FEBS'99
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In the set of the 6000 yeast proteins, called the proteome, we submitted
2~300 putative membrane proteins to binary sequence comparisons and
phylogenetic analysis. This approach identified more than 50 distinct yeast
transporter families comprising a total of 258 individual yeast transporters.
Two families, DHAI4 and DHA12, containing respectively 10 and 14 yeast
members are possibly involved in drug efflux by antiporter mechanisms.
Several of these "in silico" predictions were confirmed experimentally by
multidrug sensitivity conferred by deletions of members of these families. In
addition, X cerevisiae contains a complex pleitropic drug resistance (PDR)
network of genes controlled by the transcriptional regulators Pdrlp and
Pdr3p, which activate expression of the "ATP-binding cassette
transporters"-encoding genes PDR5, SNQ2, and YOR1 as well as other
genes. We have screened 349 toxic compounds in isogenic S cerevisiae
strains deleted of PDRS. SNQ2, or YOR1 in different combinations as well
as both PDR1 and PDR3. The screen revealed extremely promiscuous, yet
limited, and to a large extent overlapping, but distinct, drug resistance
profiles of Pdr5p, Snq2p, and Yorlp.
These transporters mediated
resistance to most currently available classes of clinically and agriculturally
important fungicides and also to many antibiotics, herbicides, and others.
Scvcral new classes of compounds were identified in the drug resistance
spectrum of these PDR5, SNQ2 and YOR1 transporters. Using genomic
microarray (collaboration with J. DeRisi and P. Brown. Stanford University)
analysis in combination with genetic and bioinlbrmatic tools, we identified
all transcriptional targets of the two major yeast multidrug resistance
regulators. Pdrlp and Pdr3p. Our analysis points out to a major role of the
transcription I5.ctors Pdrlp, in the defence of yeast cells against hydrophobic
toxic chemicals. Pdr3p has similar but partly different targets Global
resistance seems to result from parallel activations by the pdrl-3 and pdr3-7
mutations of a remarkably diversified, but largely coherent, set of
determinants most of which control multidrug transport across the plasma
membrane.
Mycobacterial genomics
S.T. Cole
Untt~ de G~n~tiqueMol~culaweBact~rienne. lnstitut Pca~teur,
28 rue du Docteur Rout. v5724 Parts Cedex 15. Fram'e
Arabidopsis has been selected as a model for the analysis of the structure
and organization of plant genomes. The short reproductive cycle autogamy
and diploidy of this species led to the choice of Arabidopsis for genetic
analysis. The size of the Arabidopsis genome (130 Mb) and the relatively
low proportion of repeated sequences were also favorable to the molecular
analysis of this genome. A dense RFLP map, the coverage of the genome
with YAC and BAC clones paved the way to the complete sequencing of
this genome. From sequences data approximatively half of the genes can be
assigned a putative function. Yet the exact function of the majority of genes
remains to be discovered. Insertional mutagenesis with transposable
elements or with T-DNA is the major route to functional analysis.
Identification of knockouts in genes of potential interest can now be
achieved at a reasonable efficiency. The potential of these genomics tools for
the identification of new genes families will be illustrated.
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Abstracts FEBS'99
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Abstracts F E B S ' 9 9
1234-
The pseudopeptide DNA mimic PNA (peptide nucleic acid) has many of the
properties desired of an antisense reagent. It binds strongly and with high
sequense specificity to complementary RNA, it has high biostability and it
is easy to chemically synthesize and modify. Results relating to antisense
gene regulation in bacteria as well as improved methods for cellular uptake
and antisense targeting using PNA in eukaryotic cells will be presented.
Abstracts FEBS'99
Recently we have shown that systemic application of optimized surfaceshielded transferrin-polyethylenimine / DNA complexes into the tail vein of
Neuro2A-bear]ng mice results in preferential Eerie delivery into ~be distantly
growing subcutaneous tumors [1]. In contrast, application of standard
DN'A/Pfff complexes resulted in gene transt~r primarily to the lung. but also in
sigaifica~zt zo~:icit, g. Preger caatre~ ,~f ~ ~b.t:'sical. e~zd c x ~ i d a ~ garac~eeers e (
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Abstracts FEBS'99
Replication of Chromosomes
B. Stillman
Cold Spring Harbor Laboratory
Cold Spring Harbor, NY USA
Abstracts FEBS'99
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ICRF, Clare Hall Laboratories, South Mimms. Herts EN6 3LD. U.K.
Control
of recombination
in Saccharomyces
cerevisiae.
F. Fabre, E. Coic and C. Soustelle
C E.A, Fontenay-aux-RosesFrance
T. Lindahl
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Abstracts FEBS'99
Abstracts FEBS'99
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[1] Fry, A.M., Meraldi, P., and Nigg, E.A. (1998) EMBO J., 17, 470-481.
[2] Fry, A.M., Mayor, T., Meraldi, P., Stierhof, Y.-D., Tanaka, K., and
Nigg, E.A. (1998) J. Cell. Biol., 141, 1563-1574.
[3] Lane, H.A., and Nigg, E.A. (1996) J. Cell Biol., 135, 1701-1713.
Blocking C-terminal tyrosine of -tubulin inhibits Mphase entry in starfish and xenopus oocytes and eggs.
Soplue Vee*, Laurence Lafanech~re*, Didier Job* and Andr~ ptcard*.
: DBMS CE4 l 7, rue des martyrs F 38054 Grenoble cedar 9
*: laboratoire A t ago, BP 44, F-66651 Banvuls sur mer cedex
Progression through the eukaryotic cell division cycle depends on stagespecific proteolysis of regulatory proteins by the ubiquitin-proteasome
system. During mitosis and GI a large ubiquitin ligase termed anaphase
promoting complex (APC) mediates destruction of anaphase inhibitors as
well as mitotic cyclths and thereby promotes chromosome separation and
exit from mitosis. Substrates ubiquitinated by the APC carry a short motif
called destruction box. Studies in budding yeast showed that the APC
cooperates with two related WD40-repeat proteins, Cdc20 and Hct 1/Cdh 1,
which are critical for the stage-specific selection of substrates by this
pathway 111,2]. Cdc20 is needed for proteolysis of Pdsl at anaphase, while
Hct 1 mediates Clb2 cyclin degradation in telophase and G1. Homologs of
Cdc20 and Hctl have been identified in other organisms including lmmans.
Recent results help to explain how these regulators ofproteolysis work [3].
Hctl and Cdc20 were both found to bind to the APC. Cdc20-APC binding
and Cdc20-mediated proteolysis were unaffected by cyclin-dependent
kinase (Cdk) activity. In contrast, binding of Hctl to the APC and Hctlmediated proteolysis were inhibited through phosphorylation of Hctl by
various cyclin-Cdkl complexes. This difference in sensitivity to Cdkl
allows Cdc20 to be active at anaphase and restricts Hctl activity to late
mitosis and G1. The exact mechanism how these WD40-proteins activate
the ubiquitin ligase activity of APC in a substrate-specific fashion is the
subject of current studies.
[1] Schwab el al. Cell 90 (1997) 683
[2] Visintin et al. Science 278 (1997) 460
[3] Zachariae et al. Science 282 (1998) 1721
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Abstracts FEBS'99
Abstracts FEBS'99
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Denmark
The p53 tumor suppressor gene is a major target for genetic alterations in
human cancer. The p53 protein is a sequence-specific transcnptional aettvator.
It is activated m response to a variety of stress signals, including genomic
damage and deregulated oncogenes, On the other hand, p53 ~s subject to
effective inactivation by the Mdm2 protein, itself a product of a p53-regulated
gene. The binding of Mdm2 to p53 results m the rapid proteolyttc degradation
of p53, serving to keep p53 activity very low m the absence of stress. In
response to genotoxtc stress, the cells accumulate increased amounts of p53.
This is largely due to an escape of p53 from Mdm2-directed proteolysis. This
escape is achieved through covalent modifications of both p53 and Mdm2. We
report that phosphorylation of p53 on serine 20, occurring in response to DNA
damage, greatly interferes with the ability of Mdm2 to bind p53 and cause its
degradation. The ATM kinase can also phosphorylate p53 in response to DNA
damage. In addition, however, ATM can also promote the phosphorylation of
Mdm2. This modification also contributes to p53 stabtlization, apparently
through Mdm2 inactwation.
Mutational events that occur early during colorectal carcinogenesis lead to
nuclear accumulatmn of activated [3-catenin. At a later stage of colorectal
tumor progression, p53 mutations occur at a high frequency. We demonstrate
that excess deregulated [3-catenin triggers the accumulation of transcriptionally
active p53, by interfering with both Mdm2-dependent and Mdm2-mdependent
p53 degradation. This p53 activatmn presumably serves as a safeguard
mechanism against cancer development, and may explain the selective pressure
for subsequent p53 inactivation.
When p53 becomes activated m response to stress, it stimulates transcription of
an array of specific target genes. We report that one of the p53 targets, at least
in certain cell types, is the c-fos ~ene. Thus, p53 may s~t at the cross-roads
Anti-tumoral responses mediated by the INK4a-ARF locus.
M. Serrano, M. Barradas, F. Bringold, C. Pantoja, I. Palmero.
Department of lmmlmolog9, and Oncolog3, National Center of
Biotechnolog3. Madmd, Spare
Normal, healthy, cells possess mechanisms that protect them from becoming
neoplasically transformed by the simple action of oncogenes. Another
characteristic of normal cells is their inability to grow indefinitely in culture:
indeed, upon accumulation of a certain number of doublings, normal cells
enter into a permanent arrest known as senescence.
The 1 N K 4 a - A R F l o c u s encodes two tumor suppressor, pl6 I~'K4~ and
p19 ARF, that regulate twv different tumor suppressor pathways: pl6 INK4a
activates Rb by inhibiting the CDK4 and CDK6 kinases; and p19 ARF
activates p53 by inhibiting the destabilizing effects of MDM2. The cellcycle inhibitor p21 mediates some of the effects of p53 in arresting
proliferation.
Expression of oncogenic Ras in primary cells is initially mitogenic
but, after a period of a few days, it triggers an anti-proLiferative response
mediated by both p l6 INK4aand p19 ARF [1,2]. We regard this response as an
anti-tumoral mechanism. Indeed, rodent cells genetically deficient in either
p 16jNK4aor p 19Aa~ a r e efficiently transformed by oncogenic Ras.
We have compared senescence in fibroblasts derived from mice
deficient in pl61>''4a, p53 or p21 [3]. We have found that fibroblasts
derived from p2 l-deficient mice senesce in a manner indistinguishable from
wild-type cells, whereas pl6- or p53-deficient cells are immortal.
Moreover, p2 l-deficient cells, like wt cells, are refractory' to transformation
by oncogenic Ras, which is in contrast to p53-deficient cells. We conclude
that the p l6tskaa/Rb and p19ARV/p53 pathways are essential for senescence
and for resistance to transformation, but p21 is dispensable for both
processes. These data correlate well with the tumor susceptibility of the
corresponding knock-out mice.
[1] Serrano et al.. Celt 88, 593 (1997).
[2] Palmero et at., Nature 395, 125 (1998).
[3] Pantoja et al., Oncogene, in press (1999).
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Abstracts FEBS'99
The Bcl-2 family members play a major role in the control of various
types of apoptosis. Bax, a pro-apoptotic member of the family, is
responsible for the mitochondrial cytochrome c effiux which activates
a cascade of caspases through binding to Apaf-I and easpase 9. We
will show that in the early phases of apoptosis, Bax undergoes a
conformational change induced by Bid, another pro-apoptotic member
of the Bcl-2 family. This change in conformation leads to Bax
insertion in mitochondrial membranes and possibly to channel
formation. The mechanisms by which Bax triggers the release of
cytochrome c from mitochondria is unclear. We will show that the
Bax-induced cytochrome c release occurs independently of the
opening of the permeability transition pore (PTP) as it is not blocked
by the PTP inhibitor cyclosporin A.
Abstracts FEBS'99
s27
As more gene sequences are determined, the demand for better methods to
predict protein function from sequence grows. Currently the only reliable
approach is to predict function by recognising sequence and/or structural
homology to a related protein, whose function is known. Recognising close
relatives is easy using standard algorithms, but recognition of more distant
homologues becomes more difficult as sequences and structures diverge.
Recent methods have improved recognition by using family information and
iterative scanning to build up a 'sequence profile'. Our interest lies in the
relationship between protein sequence, structure and function. An overview
will be presented of our current knowledge of the universe of protein
structures, and how sequences, structures and functions evolve. In particular,
we will consider the relationship between fold and function using our
classification scheme of protein structures called CATH [1 ]. Every structure
includes much information on detailed interactions, involved in biological
function, yet very little of this information is used in genome analysis. We
have therefore developed some software tools which seek to improve the
annotation of sequences by the structural and functional information,
especially regarding inter- and intra-molecular interactions. This resource is
available on the web at http://www.biochem.ucl.ac.uk/bsm. Various methods
to extract and classify functional information from structural work will also
be discussed [3].
Reference~
[1] Orengo, C.A. et al. CATH - A Hierarchic Classification of Protein
Domain Structures. Structure, 5, 1093-1108 (1997).
[2] Milbum, D., R. A. Laskowski and J. M. Thornton. SAS: Sequences
Annotated by Structure: a Tool to Facilitate the Use of Structural
Information in Sequence Analysis. Protein Engineering, 11,855-859.
[3] Wallace, A.C., Borkakoti, N. & Thornton, J.M., (1997). TESS: A
Geometric Hashing Algorithm for Deriving 3D Coordinate Templates for
Searching Structural Databases. Application to Enzyme Active Sites. Protein
Science, 6, 2308-2323.
Structure and activation by dimerisation
of the integral membrane enzyme OMPLA,
outer membrane phospholipase A
B.W. Dijkstra, A. Snijder
Laboratory of Biophysical Chemistry, Groningen University,
Nijenborgh 4, 9747 AG Groningen, the Netherlands
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Abstracts FEBS'99
Abstracts FEBS'99
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Many proteins are constructed from a series of domains or modules structural scaffolds that have been favoured in evolution[i,2]. In most
cases modules can be recognised relatively easily at the sequence level and
examples of many different module structures are now known. This
information has been derived, in most cases, using a "dissection"
approach, where identified regions of a protein are produced by
recombinant expression and their structures determined by NMR or X-ray
crystallography. Modularity appears to provide biological systems with
several advantages including: a convenient way of presenting appropriate
ligand binding sites in the right position; a way of producing regulatory
effects by spatial rearrangement of modules and a way of forming
appropriate signal-transducing modular assemblies. Recent studies in this
laboratory, of a wide range of modules derived from proteins of the cell
surface, the extracellular matrix and intracellular signalling will be used to
illustrate some common features of module structure and assembly.
Special emphasis will be placed on sites on modules that interact with
other molecules and on relative flexibility between modules.
[1] Campbell I.D. (1998) The modular architecture of leukocyte cellsurface receptors. Immunological Reviews163, 11-18
[2]. Campbell 1D & Downing AK (1998) NMR of modular proteinsNature
Struct. Biol. 5, 496-499
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Abstracts FEBS'99
The major snRNPs Ul, U2, U4/U6 and U5 are trans-acting factors
required for pre-mRNA splicing. These particles, together with additional
factors, assemble in an ordered fashion onto the pre-mRNA to form a
functional splicing complex, the spliceosome, in which catalysis occurs.
We are analysing the structure of snRNPs and their role in spliceosome
assembly and splicing, with particular emphasis on the snRNP protein
moiety. With more than 60 distinct proteins identified, snRNPs purified
from HeLa cells exhibit a surprisingly complex protein composition This
is particularly true of the 25S [U4/U6.U5] tri-snRNP which, in addition to
the Sm core polypeptides, contains 24 particle-specific proteins not present
in U1 or U2 snRNPs, cDNA cloning of the tri-snRNP proteins revealed a
striking diversity of sequence motifs including novel RNA-binding motifs,
RNA helicase and GTPase domains as well as a novel cyclophllin. Several
of the proteins are implicated in the regulation of both RNA and protein
conformational changes which occur in the tri-snRNP during the splicing
process We have also carried out a comprehensive characterization of the
proteins of purified [U4AJ6.U5] tri-snRNPs from the yeast S. cerevisiae,
using mass spectrometry (in collaboration with G. Neubauer and M.
Mann) Most of the tri-snRNP proteins are evolutionarily highly conserved
between yeast and human The results of biochemical and genetic
experiments investigating the role of individual tri-snRNP proteins m
splicing will be presented Finally, we have started to investigate the
protein composition of the minor snRNPs UI 1, UI2, U 4 and U6,~ from
HeLa cells These particles, together with U5 snRNP, form the so-called
minor spliceosome which catalyses the splicing of a rare class of introns
with unique splice sites. Interestingly, in addition to proteins which are
uniquely present in the minor snRNPs, a large number of proteins are
shared by the major and minor snRNPs. Our data shed light on the
evolutionary relationship between the minor and major spliceosome.
The eukaryotic nucleoli contain a large number (more than 100) of small
RNAs (snoRNAs) that have been classified into two major classes based on
their: i) function ii) primary sequence and structural conserved elements and iii)
protein factors with which they interact. Besides a few snoRNAs which are
involved in rRNA processing, most of the members of the two classes
participate in the two major post-transcriptional modifications of rRNA: 2'-0methylation (C/D box snoRNAs) and pseudouridilation (H/ACA box snoRNAs).
Another interesting feature is that most of the members this new family of RNAs
are encoded in introns of protein coding genes and are produced not by
independent transcription but, instead, by processing of the pre-mRNA in which
they reside. Thus, the function, structure and biosynthesis of these RNPs are
very new and interesting topics to be studied. We have extensively studied the
structure and biosynthesis of U 16 snoRNA in X.laevis and that of U I8 snoRNA
in S.cerevisiae. Both snoRNAs belong to the CJD box family. UI6 snoRNA is
released from its intron precursor by endonucleolytic cleavages through a
pathway which is alternative to splicing. The conserved C and D box elements,
which have been shown to be indispensable both for processing and for stability
of the snoRNA, play their role by binding to specific protein factors. In vivo UV
cross-linking experiments have shown that three proteins specifically interact
with U16 snoRNA: p40 (fibrillarin) and p68 which require intact boxes C and D
and p62 which requires a region comprised between the two boxes. These
factors are likely to represent common general factors for the whole class of C/D
box snoRNAs. The yeast intron-encoded UI8 snoRNA is processed mainly
through exonucleolytic digestion of the host intron, but also through a splicingindependent pathway relying on endonucleolytic digestion of the unspliced host
pre-mRNA. Inspection of the host intron revealed the presence of two long and
complementary sequences surrounding the UI8 coding region, potentially
forming an intramolecular stem. Mutational analysis of these sequences showed
that the external stem is necessary for accumulation of UI8 snoRNA from both
processing pathways. From the comparison of the yeast and vertebrates studies a
general model for the intron-encoded snoRNA biosynthesis can be derived.
E.C. Hurt
By
genetically exploiting the Nsp 1p complex, a nuclear export receptor for tRNA
(called Los lp) could be characterized. To identify components involved in the
nuclear export of ribosomes, an in vivo assay was developed exploiting a GFPtagged version of ribosomal protein L25. After its import into the nucleolus,
L25-GFP assembles with 60S ribosomal subunits which are subsequently
exported into the cytoplasm. In wild-type cells, GFP-labeled ribosomes are
only detected by fluorescence in the cytoplasm. However, thermosensitive
rnal-I (Ran-GAP), prp20-1 (Ran-GEF) and nucleoporin nup49 and nspl
mutants are impaired in ribosomal export as revealed by nuclear accumulation
of L25-GFP. Nuclear export of ribosomes thus requires the nuclear/cytoplasmic
Ran-cycle and distinct nucleoporins.
Abstracts FEBS'99
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Abstracts FEBS'99
In kinetoplastid protozoa, mitochondrial (mt) mRNAs are posttranscriptionally altered by insertion and deletion of uridylate
residues, the information being provided by guide (g) RNAs. This
remarkable process thus generates transcript sequences that are
different from those encoded by the mt genome and is one of the
many forms of RNA editing that are currently known. U
insertion/deletion editing is widespread in the kinetoplastid lineage,
suggestive of an ancient evolutionary origin. Current popular
mechanisms envisage a series of consecutive 'cut-and-paste'
reactions, during which pre-edited mRNAs are cleaved at one editing
site by endonucleases, followed by terminal uridylate transferasemediated U-addition to the 3' end of the 5' cleavage product in the
case of insertion or exonuclease-mediated U-removal in the case of
deletion. In the final step, the two halves of the RNA are joined by
an RNA ligase. In order to shed further light on the mechanism of
RNA editing, we have identified and characterized a number of mt
proteins that have affinity for the 3' oligo (U) extension of gRNAs in
UV cross-linking assays. Most of our recent work has been focused
on two gRNA-binding proteins of approximately 30 kDa from
mitochondria of the insect trypanosomatid Crithidiafasciculata. One
of these proteins, uBP30.1, turned out to be the C fasciculata
homologue of a gRNA binding protein of 21 kDa (gBP21) from
Trypanosoma brucei, a protein that has recently been found in
association with active RNA editing complexes ('editosomes'). The
other protein, uBP30.2, has no homology to known proteins. Both
proteins are basic with pI's around 9.7, bind to gRNAs with high
affinity provided the gRNAs are equipped with a U-tail and are
present in large macromolecular complex(es) that also contain
gRNAs and mRNAs, but no rRNAs. We conclude that we have
identified two components of the C. fasciculata editosomal
machinery that interact with the U-tail of gRNAs via novel RNAbinding motifs.
Guide snoRNAs for the modification of rRNA nucleotides
J.P Bachellerie, J. Cavaille and L H Q u
Laboratotre de Biologte ivlol~culatre Eucaryote du (~N R.,S~. Untverslte
Paul-Sabatwr, 31062 Toulouse Cedex, France
Abstracts FEBS'99
s33
The luciferase gene, in two different constructs, has been selected as target for
testing the hammerhead ribozyme for the inhibition of gene expression in cell
culture. One is a cell line which stably expresses Iuciferase under control of
the HIV- l promoter where the ribozyme was directed against a position in the
LTR. In the other construct the ribozyme was directed against the luciferase
gene under control of a tetracycline-regulated promoter. Ribozyme-susceptible
sites were identified by incubation of transcripts with ribozymes with
randomised binding arms. Transfection was done with cationic liposomes.
The natural l'onn of the hairpin ribozymc is a four-way helical junction, two arms
of which calvy Rn'mally-unpaimd loops. Physical association between these loops
is induced by the cooperative binding of two magnesium ions. This is required for
catalytic activity, and changes in the coufomaation of the helical junction lead to
reduction in cleavage activity.
ribozymes.
Chemically modified
ribozymes
were
J. 1 6, 7481-7489.
A.I.I]. Murchie. J.B. Thomson, 1.. Vv'~tllcraild DM.J. I,dlcy (1998) Folding el the hairpifJ
ribozyine ill its n~lulral olifornllilioti ~lChicvc~ close plly~ic:ll proxilnil)' of the loops
s34
Abstracts FEBS'99
We have been isolating new RNA catalysts (ribozymes) from large pools
of random RNA sequences in an effort to better understand the basic
properties of RNA as a catalyst and to see whether these properties are
compatible with the RNA world scenario. The hypothesis that certain RNA
molecules may be able to catalyze RNA replication is central to the RNA
world scenario. In support of this idea, we have generated an RNA that
synthesizes short segments of RNA using the same reaction as that employed
by protein enzymes that catalyze RNA polymerization. This ribozyme is
serving as a starting point in efforts to evolve ribozymes capable of more
extensive and accurate polymerization. Another challenge for the RNA world
hypothesis is the source of nucleotide substrates needed for RNA
polymerization. Such nucleotides must have been synthesized from simpler
precursors. We have isolated RNA molecules that catalyze the synthesis of a
pyrimidine nucleotide at their 3" terminus. Optimization of these ribozymes to
the point where they synthesize non-tethered nucleotides would further
support the idea of an RNA world that included nucleotide synthesis and other
metabolic pathways mediated by ribozymes.
Other experiments are exploring the distribution of catalysts in RNA
sequence space. Examination of natural ribozyme isolates shows that the
same ribozyme motif can be represented by very different sequences.
Because the different sequences have descended from a common ancestor,
there are likely to be neutral paths in sequence space that connect these
different sequences, allowing evolutionary drift from one sequence to the
other without loss of function. The set of all possible neutral paths for a
particular ribozyme is thought of as a neutral network. We have evidence that
neutral networks for completely different ribozylne motifs can intersect. That
is, we have generated an RNA sequence that can fold into two different
ribozyme motifs. Because the molecule sometimes folds into one motif and
sometimes folds into the other motif, the same sequence catalyzes two
different reactions. The fact that networks for functional RNAs intersect
makes RNA an attractive biopolymer substrate for the birth of new function
early in the evolution of life. In principle, only one ribozyme needed to
emerge from arbitrary sequences at the beginning of the RNA world; all other
ribozymes could have descended from this founding ribozyme. A related
implication is that RNAs in modem biology with no structural or functional
similarities may have common ancestry. Furthermore, our results show that
evolutionary divergence can precede duplication, which differs from the
canonical view of divergence following duplication.
Abstracts FEBS'99
s35
We are investigating the mechanism of chromatin remodeling that is characteristic of many regulated promoters during gene activation and are focusing on the P H 0 5 promoter from yeast [1]. In the repressed state, the
P H 0 5 promoter is organized in an array of positioned nucleosomes that is
only interrupted by a short hypersensitive site. Upon activating the gene by
phosphate starvation, two nucleosomes upstream and two downstream of
the hypersensitive site are disrupted, and the transcription factor Pho4 binds
to two UAS elements.
The transcription factor Pho4 is strictly required for the chromatin
transition, and we can show that not only the DNA binding domain but also
the activation domain is needed. Heterologous activation domains, for example from the glucocorticoid receptor, are also capable of triggering the
chromatin transition when fused to the Pho4 DNA binding domain.
When we bring the P H 0 5 promoter under galactose control by replacing either or both UAS elements by Gal4 binding sites we find that one
high afflmty Gal4 binding site is sufficient for the chromatin transition and
that again four nucleosomes are remodeled. The Gal4 DNA binding domain
can brad to a nucleosomal site in vivo, generating a triple complex between
bistones, DNA and factor. This binding results in a local chromatin perlurbation which is very different, however, from the four nucleosome transition
usually seen.
The historic acetyl transferase Gcn5 nmkes only a minor contribution
to P H 0 5 activation and chromatin opening and is largely dispensable. Hawever, under submaximally inducing conditions it is required for activation.
In its absence, a novel chromatin pattern at the promoter is observed consisting of randomized nucleosomes.
We have extended our studies to another structural gene of the PHO
family, the P H 0 8 gene which encodes a weakly expressed alkaline phosph,ttas~.. The contribution of the SWi/SNF remodeling machine and of Gcn5
at the P H 0 8 and the P H 0 5 promoter are strikingly different, and the role of
these activities will be discussed.
[1] Svaren J, Hrrz W: Tramcription Factors vs nack'o:somes: Rcgulation ofthc P H 0 5 promoter in yeast. Trends Btochem.Sci. 1997, 22:93-97.
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Abstracts FEBS'99
Abstracts FEBS'99
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Protein-protein interactions
within the RNA polymerase HI transcription machinery
A. Sentenac, E. Deprez, H. Dumay, M.L. Fen-i, C. Conesa,
O. Lefebvre, C. Marck and M. Werner
S.B.G.A~, CEA/Saclay, 91191 Gif-sur-YvetteCedex, France
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Abstracts FEBS'99
studied by SAGE
H.F. Tabak, MJ.A. Groot Koerkamp, A.J. Kal
Department of Btochemistry, Academic Medical Centre,
Metbergdreef l S, 1105 AZ Amsterdam, The Netherlands
S. Vaulont, A. Kahn
1CGM, I N S E R M U:129,
24 Rue du Fg. Saint-Jacques, 75014 Paris - FRANCE
Abstracts FEBS'99
s39
Retinoid signaling
D. Metzger and P. Chambon
IGBMC, CNRS/INSERM/ULP/CoIII~ge de France,
BP 163, 67404 lllkirch Cedex, C.U. de Strasbourg, France.
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Abstracts FEBS'99
(1) Buckingham, M. et al_ hi: Cell Lineage and Fate Determination. S.A.
Moody Ed., Academic Press, Chapter 41, (1998) 617; (2) Tajbakhsb, S. et
al., Development, 125, (1998) 4155; (3) Tajbakhsh, S. et al., Nature, 384,
(1996) 266; (4) Tajbakhsh, S. et al., Cell, 89, (1997) 127; (5) Tajbakhsh,
S.et al., Neuron, 13, (1994) 813.
The Pax5 gene codes for the transcription factor BSAP which is expressed
throughout B-cell development except in terminally differentiated plasma cells.
Gene inactwation in the mouse revealed that Pax5 is essential for the
progression of B-cell development beyond an early pro-B cell stage m the bone
marrow (1,2). The early pro-B cells present in Pa,r5 (4-) bone marrow can be
cultured in vitro on stromal cells in the presence of IL-7 and express a large
number of B-lymphoid-specific genes, suggesting that they correspond to
comrmtted B-lymphocytes (3).
We now present evidence that the Pax5 (4-) pro-B cells are in fact noncomrrntted hematopoietic progenitor ceils which, upon appropriate st~mulatmn,
are able to differentiate along many diffferent hematopoietic lineages except
along the B-ceU pathway. Upon IL-7 withdrawal, these pro-B cells can
uniformly differentiate in vitro to phagocytic macrophages in the presence of MCSF (instead of IL-7), to bone-resorbing osteoclasts in the presence of
TRANCE, to antigen-presenting dendritic cells in the presence of GM-CSF, to
natural killer cells in the presence of IL-2 and to granulocytes in the presence of
G-CSF. In addition, the Pax5 (-/-) pro-B cells can efficiently reconstitute T-cell
development in vivo, as they participate in the formation of a normal thymus
upon injection into RAG2-deficient truce lacking mature T-lymphocytes.
Moreover, Pax5 (-/-) pro-B cells can in vivo rescue the osteoclast detect of cfos-deficient mice. Pax5 (4-) pro-B cells have therefore many characteristics of
a stem cell. Retrovirus-mediated expression of Pax5 m these cells restricts,
however, their developmental potential to the B-lymphoid lineage, indicating
that Pax5 is the critical B-lineage determination gene.
Recently we have demonstrated that the Pax5 gene is monoallelically
expressed at the onset of B-cell development (4). The selection of one of the
two Pax5 alleles for transcription is independent of the parental origin and thus
random. In summary, these data indicate that the transcription initiation of Pax5
is a stochastic process resulting in B-lineage comrmtment.
[1] Urb~nek et al. (1994). Cell 79, 901-912. [2] Nutt et al. (1997). Genes Dev.
11, 476-491. [3] Nutt et al. (1998). EMBO J. 17: 2319-2333. [4] Nutt et al.
(1999). Nature Genet., in press.
Abstracts FEBS' 99
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Our understanding of the events that take place when a ribosome encounters
a translation termination codon has been greatly facilitated by genetic
screens for yeast mutants that alter the efficiency of a SUQ5, a weak ochre
suppressor tRNA set. This screen has identified the two essential components
of the yeast release factor: eRF1 (encoded by the SUP45 gene) and eRF3
(encoded by the SUP35 gene) [1]. eRF1 is an RNA-binding protein and
deletion analysis of its C-terminus has identified a region important for its
interaction with both eRF3 and the ribosome [2] although binding of the two
eRF components to the ribosome appear to be independent events. The Cterminus ofeRF1 also contains one or more sites that can be phosphorylated
in vitro by a ribosome-associated kinase raisingthe possibility that
translation termination may be regulated through phosphorylation of eRF 1.
A second novel mode of regulation of translation termination in yeast is
mediated by the unusual prion-like behaviour of eRF3. In certain strains
(designated [PS/+]) eRF3 is found primarily as a high mol. wt. amyloid-like
aggregate which is established and maintained via a mechanism analogous
to the establishment of the prion form of the mammalian PrP protein. In
[PS1+] strains there are only very low levels of soluble eRF3 that can form a
functional release factor with eRF1 and this defect in termination can be
detected by enhancement of the efficiency of the SUQ5 suppressor. In
ethanol-stressed yeast cells there is a transient and partial resolubilisation of
the eRF3 polypeptide from the priori-like form thereby restoring efficient
translation termination under conditions of stress [3]. We have also
identified conditions under which the prion form of eRF3 can be stably
eliminated from yeast cells. The importance of the prion-like behaviour of
eRF3 in the regulation of translation termination in this simple eukaryote
will be discussed.
References: [1] Stansfield, I et al., EMBO J. 14 (1995) 4365; [2]
Euwilaichitr, L. et al., Mol. Microbiol. (1999) inpress; [3] Eaglestone, S. et
al., EMBO J. (1999)
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Luitjens, S. Crinanden and J. Kimble.* Dept Blochem, U WisMadison, 53706 USA and * H.H.M.I.
Abstracts FEBS'99
s43
represses the translation of its own mRNA. The crystal structure of the
complex between tRNAT M and ThrRS, reveals structural features showing
novel strategies for providing specificity in tRNA selection. These include
an amino terminal domain containing a new protein fold that makes minor
groove contacts with the tRNA acceptor stem. The anticodon loop is
characterized by a large deformation and an unique interaction between two
adjacent anticodon bases accounting for their prominant role in tRNA
identity and translational control. Despite the presence of all class II
conserved residues necessary for aminoacylation, the active site exhibits a
catalytic zinc ion. never observed so far in aminoacyl-tRNA synthetases,
that is shown to be essential in vivo. This finding open new perpectives from
the point of view of catalysis and evolution.
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and that is essential for cell survival under stress conditions such as heat shock
to 42C [ 1]. In addition, this system facilitates the degradation of shortlived
and misfolded proteins by proteases. While the protein repair function of the
DnaK system is well established for model substrates, the nature of the
misfolded protein substrates which accumulate in E. coli under heat shock
conditions is largely unknown and was analyzed in this study.
When soluble total extracts ofE. coli cells were subjected to severe heat shock
treatment a significant fraction of proteins aggregated. Among several
exogeneously added chaperones of the E. coli cytosol tested for their ability to
prevent protein aggregation in these extracts, only the DnaK system was
found to be highly effective. This finding correlates well with the essentiality
of this system in vivo at 42C. To identify the heat labile protein substrates of
DnaK, we analyzed the cellular proteins which aggregated in a DnaKdependent fashion in both, cell extracts and in vivo (in AdnaK52 nutants),
using 2-D gel electrophoresis and mass spectroscopy. More than 50 different
proteins aggregated in dnaK null mutants upon shift to 42C, and a similar
protein pattern was found in heat-shocked cell extracts. These protein
substrates exert a multitude of cell functions and show no specificity towards
their pI value. However, large and oligomeric proteins were more abundant
while small proteins (< 25 kD) were largely excluded, showing that
multidomain and oligomeric proteins are particularly heat labile and require the
chaperone activity of the DnaK system. For one natural substrate identified in
our analysis, the MetE protein, we verified with purified components that the
DnaK system acts directly to prevent its aggregation. Together, these results
provide for the first time information on the nature of the heat labile proteins in
E. coli that require the chaperone function of the DnaK system.
In a second approach we investigated the ability of the DnaK system to
cooperate with other chaperones oftbe E. coli cytosol in the disaggregation of
aggregated proteins. Data will be presented which document such activity.
[1] Hesterkamp and Bukau, EMBO J. 17, (1998) 4818
Molecular chaperones are highly conserved proteins, which help to reach and
maintain the conformational stability of other proteins in the cell. One of the
most abundant chaperone of the eukaryotic cytosol is the 90 kDa heat shock
protein, Hsp90. Hsp90 has been shown to be a rather specific chaperone, aiding
the correct folding of numerous protein kinases and nuclear hormone receptors
involved in various signalling pathways [1]. If Hsp90 function becomes
compromised either by blocking its functions with its specific inhibitor,
geldanamycin, or by massive environmental stress, the affected population
shows a sudden burst of phenotypic changes as a sign of an enhanced adaptation
program. Hsp90 keeps target proteins in a "folding competent state". In contrast
with other chaperones it has two target binding sites: one in its N-terminal, and
another in its C-terminal domain. However, details of its chaperone mechanism
are not clear yet. Ten years ago we have found that Hsp90 has low affinity ATPbinding properties [2]. Later, a direct comparison of the ATP-binding of Hsp90,
and other molecular chaperones, such as Hsp70 having higher affnity
nucleotide binding sites raised some concerns on Hsp90 nucleotide binding.
However, recent studies firmly established Hsp90 as an "active" chaperone,
which function is modulated by ATP both in vitro and in vivo. Hsp90
association with ATP or ADP changes its affinity towards various client
proteins and peptides as well as its complex formation with a number of cochaperone molecules. ATP also affects binding of Hsp90 to filamentous actin in
a modified in vitro motility assay [3]. Other recent findings also indicate a low
affinity, dynamic binding of Hsp90 to various cytoskeletal elements, which
suggests its involvement in the higher organisation of the eukaryotic cytoplasm.
Hsp90 and its co-chaperones, the "foldosome", may participate in a
"microtrabecular lattice"-type meshwork of eukaryotic cells [1].
1. Csermely, P. et al. Pharmacol. Therapeut. 79, (1998) 129
2. Csermely, P. et al. J. Biol. Chem. 266, (1991) 4943
3. Kellermayer M.S.Z. et aL Biochem. Biophys. Res. Commun. 211, (1995)
166
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Gepvtany
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9.2 Endocytosis
Endoeytie uptake and intracellular transport of toxins
K. Sandvig ', O. Garred a, T.G. Iversena, P. Nicoziani b, G.
Skretting a, B. van Deursb
aThe Norwegian Radium Hospital, Montebello, Oslo, Norway," hThe
Panum Institute, University of Copenhagen, Copenhagen, Denmark
Cerf-
Regulation of endocytosis
B. van Deursa, K. Rodal b, F. Vilhardt", M. Stahlhut", G.
Skretting b, A. Llorente b, O. Garredb and K. Sandvig b
aThe Panum Institute, Universtty of Copenhagen, Denmark and bThe
Norwegian Radium Hospital, Montebello, Oslo, Norwc~v
Our recent studies show that cholesterol is required for the invagination of
clathrin-coated pits. Thus. when cholesterol was extracted by methyl-[3cyclodextrin, internalization of transferrin, but not of ricin, was strongly
reduced. EM analysis revealed that invaginated caveolae disappeared in the
cholesterol-depleted cells. By contrast clathrin-coated pits at the cell surface
increased in number and concentrated transferrin receptors to the same extent
as control cells, but they were remarkably flattened. Invagination of coated
pits and transferrin uptake could be recovered in serum-free medium without
cyclodextrin, the recovery was inhibited by the cholesterol synthesis-inhibitor
lovastatin, but did occur when a water-soluble form of cholesterol was present
in addition to lovastatin. Interestingly, the flattened coated pits in cholesteroldepleted cells were not distributed at random but appeared in microdomains
of 2-4, suggesting that preexisting coated pits act as nucleation sites for the
binding of clathrin and formation of new coated pits.
Endocytosis in various cell types studied so far seems to depend on Nethylmaleimide (NEM)-sensitive proteins and is inhibited by NEM. However,
in MDCK l cells, NEM induces macropinocytosis at the apical surface. Thus
the uptake of ricin and HRP was strongly increased in NEM-treated cells and
EM studies with Ruthenium Red. a "dye" binding to plasma membrane
polysaccharides and thus allowing an unequivocal distinction between
surface-associated and truly internalized structures revealed that the effect of
NEM on the apical plasma membrane domain was a marked ruffling followed
by closure of the vacuoles formed by the ruffles. The ruffling activity
apparently involves protein kinase C and phospholipase D while
phosphoinositide 3-kinase seems to be involved in the final closure step.
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MUCIN BIOSYNTHESIS
H. Clausen, E.P. Bennett, H. Hassan, T. Schwlentek
Faculty of Health Sctences, School of Denttstrp. Umversityof
Copenhagen, Notre Alle 20. DK-2200, Copenhagen N. Denmark
Mucin-type O-linked protein glycosylation is initiated by the transfer of Nacetylgalactosamine (GalNAc) to serine and threonine amino acid residues
catalysed by UDP-GalNAc: polypeptide N-acetylgalactosaminyltransferase
activities (GalNAc-transferases). Eight members of a large mammalian
family of homologous GalNAc-transferases with different peptide acceptor
substrate specificites and expression patterns have been identified and
characterized. The data indicate that the repertoire of GalNAc-transferases
in cells is the main factor determining the attachment sites of O-glycans,
and suggest that O-glycosylation of proteins is a highly regulated process
with cell type specificity. The repertoire of GalNAc-transferases vary with
cell differentiation and malignant transformation, and it is suggested that
changes in GalNAc-transferase expression relate directly to changes in
mucin glycosylation in cancer. The cell membrane mucin, MUC1, is a
prime target for immunotherapy of breast, prostate, and ovarian cancers,
and in vitro methods for chemoenzymatic production of glycopeptide
vaccine candidates have been developed. The processing of O-glycans also
involve large glycosyltransferase gene families, and expression of different
members of these allow for differential regulation of elongation/branching
status of O-glycans. Progress in the characterization of the processing step
of O-glycans will also be presented.
Supported by funds from the 4'h EU Framework.
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The yeast Saecharomyces cerevisiae is likely to be the first organism for which
a complete inventory of mitocbondrial proteins and their functions can be
drawn up. A survey of the 340 or so proteins currently known to be localised in
yeast mitochondria reveals the considerable investment required to maintain
the organelle's own genetic system, which itself contributes seven key
components of the electron transport chain. Translation and respiratory
complex assembly are particularly expensive processes, together requiring
around 150 of the proteins so far known. Recent developments in both areas
will be reviewed and approaches to the identification of novel mitochondrial
proteins discussed.
Abstracts FEBS'99
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Mitochondria in Apoptosis
Guido Kroemer
CNRS, ERSI984, 19 rue Guy M6quet, F-94801 Villcjmf, France
The hypothesis that mitochondria control cell death has passed through
successive phases of neglect, disdain, suspicion, and (partial) acceptance.
Although the details are still controversial, it is aggreed on that, in response to
most pro-apoptotic signal transduction pathways or lethal damage pathways,
mitochondrial membrane permeability is compromised, leading to the disruption
of essential mitochondrial functions and/or the seIective release of soluble
mitochondrial intermembrane (not matrix) ~roteins (SIMPs). Several among
these SIMPs have potential apoptogenic properties: apoptosis inducing factor
(AIF), because it can translocate to the nucleus where it causes chromatin
condensation and large scale (50 kBp) DNA fragmentation; pro-caspases 2,3,
and 9 because they participate in the caspase activation cascade; and cytochrome
c because it interacts with Apaf-I to activate caspase-9. If these proteins, in
particular caspases, become activated, they give rise to typical apoptotic cell
death. In contrast, when caspases are inhibited (or when their activation is
prevented due to the depletion of the Apaf-1 co-factor ATP), cells die from a
bioenergetic catastrophe without acquiring the apoptotic morphology.
What determines cell death thus is not always the action of SIMPs. Rather, cell
death is determined by the underlying cause of SIMP release: mitochondrial
membrane permeabilization. Of note, it appears that both anti-apoptotic Bcl-2like proteins and pro-apoptotic Bax-like proteins act on mitochondria to inhibit or
favor membrane permeabilization, respectively. The apoptogenic activity of Bax
involves its translocation from the cytosol to the outer membrane, followed by a
conformational change (perhaps induced by interaction with proteins from the
pro-apoptotic "BH3-only" branch of the Bcl-2 family). It has been suggested that
Bax would be itself sufficient for membrane permeabilization and that
oligomerization of this pore-forming protein would allow to build up channels
sufficiently large to release SIMPs. However, the Bax-mediated release of
SIMPs is inhibited by cyclosporin A, a ligand of mitochondrial cyclophilin D,
and by bongkrekic acid, a ligand of the adenine nucleotide translocator (ANT),
indicating that Bax-mediated outer membrane permeabilization requires, at least
at some point, interaction with sessile mitochondrial proteins from the inner
membrane. Moreover, these findings suggest the involvement of the permeability
transition pore complex (PTPC), in the regulation of membrane permeability.
This scenario has important implications for the understanding of pathologyrelated dysregulations in apoptosis, as well as for the design of therapeutic
strategies aimed at correcting such imbalances in cell death regulation.
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[2].
A redox coupled conformational change in Asp51 of subunit I and a hydrogen
bond network connecting Asp51 with the matrix surface only in the fully
oxidized state indicated a redox coupled switching in the accessibility of the
carboxyl group of Asp51 to the bulk water phase on one side to the other
accompanied by a possible pK shift in the carboxyl group. The hydrogenbond network system including Asp51 did not include the 02 reduction site
suggesting an indirect coupling between proton pumping and 02 reduction in
the enzyme.
[1]T. Tsukihara et al. Science, 269 (1995) 1069.
[2]W. S. Caughey et al. in The Enzymes (Boyer P. D., ed) Academic Press,
New York vol. 13 (1976) 299.
ATP synthase's motor function
Peter Dimroth
Mikrobiologisches Instimt, EidgenOssische Technische
Hochschule, ETH-Zentrum, CH-8092 Ziirich, Switzerland
The ATP synthase is constructed of an extrinsic domain, Ft, which harbours
the catalytic sites for ATP production and a membrane-integral domain, Fo,
which transforms the free energy of an electrochemical gradient of protons
or Na+ ions into a counterrotation of the rotor versus the stator. The motor
module consists of a single a subunit, being part of the stator and a ring of
12c subunits, being part of the rotor. When ATP is synthesised, the coupling
ions move through the stator channel onto a binding site on the rotor from
where they are released to the opposite side of the membrane after the rotor
has turned. We propose a functional model for the generation of rotational
torque. 1) An empty, negatively charged rotor site is electrostatically
attracted by the positive stator charge. 2) The electrical potential facilitates
the thermal escape of the rotor site into the direction of the stator channel. 3)
The rotor site is occupied with the coupling ion from the stator channel. 4)
This allows further rotation of this site through an area of low dielectric. 5)
By this movement, the coupling ion gets access to the opposite side of the
membrane and dissociates.
The model is consistent with recent results on structure and function of the
Na+-translocating ATP synthase of Propionigenium rnodestum.
Abstracts FEBS'99
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GABAB receptor~ were first recognized 18 years ago and it is 25 years since
the GABAB receptor agonist baclo|en was introduced into the treamlent of
spasticity. However the lack of a molecular understanding of the GABA,
receptor system made it impossible to fully exploit its therapeutic potential.
It was not until 1997 that the development of the high-affinity antagonist
[1251]CGP64213 allowed the isolation of GABAaRIa (BRla) using an
expression cloning approach (Kaupmann et al., 1997). Subsequently the
GABAsRIb cDNA was isolated using homology screening. GABA~RIa
and GABABRIb derive from the same gene by N-terminal alternative
splicing. Database searches with the GABAaRI sequence information led to
the discovery of GABABR2 (Kaupmann et al., 1998a). The distribution of
GABABRI and GABABR2 transcripts in the brain, as studied by in situ
hybridization, is largely overlapping and qualitatively parallel those of
GABAB agonist and antagonist binding sites, suggesting that GABAaR I and
GABABR2 constitute the majority of native GABAB binding sites. Although
the cloned GABAB receptors showed many of the expected properties in
terms of structure and pharmacology, they only reluctantly reproduced the
signalling properties of native receptors in heterologous cells (Kaupmann et
al., 1998b). The strong overlap of the in sito hybridization patterns indicated
that GABABR1 and GABABR2 are co-expressed in many neuronal
populations and that a co-expression was possibly needed for robust
functional activity. Indeed while neither GABABRla/-b nor GABABR2
alone efficiently activated Kir3 channels their co-expression in HEK293
cells and Xenopus oocytes yielded robust GABA evoked currents.
lmmunoelectron microscopy using specific antibodies provided further
evidence for an assembly of heteromeric GABAB receptors in vivo by
showing an extensive co-localization of GABABRI and GABABR2 proteins
at Purkinje cell dendritic spines. This represents the first demonstration of
hetero-assembly among G protein coupled receptors.
Kaupmann et al., Nature 386, 1997, 239.
Kaupmann et al., Nature 396, 1998a, 683.
Kaupmann et al., Natl Acad Sci USA 95, 1998b, 14991.
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FUNCTION OF ADAPTOR PROTEINS IN SIGNAL TRANSDUCTION FROM THE B CELL ANTIGEN RECEPTOR
J. Wienands,B. Wollscheidt,V. Rolli, W. Schamel, Y.-W. Su, H. Jumaa,
amplifies the
signalling process
by
recruiting raft
microdomains that contain LcK and LAT to the site of TCR engagements.
This mechanism is particularly important for naive T cells that express low
levels of rafts, LAT and Lck at the plasma membrane. The duration of
antigenic stimulation determines the fate of antigen-stimulated T cells, i.e.
their clonal expansion, the development of memory and effectors
phenotypes
E. Vivier
Centre d'Immanologie de Marseille-Luminy and
Institut Universitalre de France
A family of cell surface receptors involved in the control of cell activation
has recently emerged. These receptors are characterized by the presence of
1 to 4 intracytoplasmic Immunoreceptor Tyrosine-based Activation Motifs
(ITIMs) based on the consensus (I/V/L/S)xYxx(L/V). ITIM-bearing
receptors belong to one of two receptor families: the immunoglobulin- and
the C2 lectin proteins. ITIM-bearing receptors are expressed on
hematopoieitc cells as well as non-hematopoietic cells. ITIM-bearing
receptors require co-aggregation with protein tyrosine kinase-dependent
receptors in order to mediate their inhibitory function. Upon engagement,
the Tyrosine residue present in 1TIM is phosphorylated and allows the
association with SH2-containing intracytoplasmic phosphatases.
Phosphatases recrmted in vivo by /TIM-bearing receptors belong to 2
categories: the protein tyrosine phosphatases, SHP-1/SHP-2 and the
polyphosphate inositol pbospbatase, SHIP. Whereas FcTRIIB is the only
SHIP-associating ITIM-bearing receptors, all other 1TIM-bearing
molecules bind to SHP-1 and/or SHP-2. We focused our attention on
Killer-cell Ig-like Receptors (KIRs), which serve as NK and T lymphocyte
receptors for MHC Class Ia molecules, on the CD94-NKG2A/B
heterodimers, which serve as NK and T lymphocyte receptors for MHC
Class Ib molecules (e.g. HLA-E), as well as on PIR-B, which is
expressed on mouse B and myeloid cells, and showed that these receptors
are ITIM-bearing inhibitory receptors. Isoforms of ITIM-bearing receptors
have been identified, and are characterized by their lack of intracytoplasmic
ITIM, as well as their activating properties. We have identified
KARAP/DAP-12, a 12 kDa transmembrane polypeptide bearing an ITAM
(Immunoreceptor Tyrosine-based Activation Motif) which associates with
KARs (Killer-cell Activating Receptors), the activating isoforms of KIRs.
Genetic dissection of IT/M-beating receptors and KARAP will contribute
to the precize understanding of this novel regulatory pathway in vivo.
The B cell antigen receptor (BCR) complex consists of the membranebound immunoglobulin molecule (mIg) and the Ig-ct/Ig-I~heterodimer
involved in ligand-binding and signal transduction, respectively. We
analysed the composition of affinity purified BCR by blue native gel
electrophoresis. Only one band reacting with anti-lg and anti-Ig-ct
antibodies was detected, showing that the BCR is forming a complex of
defined size the stoichiometry of which we are currently analysing.
One of the most rapidly phosphorylated proteins, detected after ligation
of the BCR or exposure of B cells to pervanadate, is the B cell specific
adaptor protein SLP-65/BLNK, showing similarity to the T cell adaptor
protein SLP-76. Both proteins are forming complexes with other
adaptor proteins like Grb2 and Vav and are essential for lymphocyte
activation. The phosphorylated SLP-65 protein is recruiting the protein
tyrosine kinase BTK to the complex and this may result in increasing
PLC-y phosphorylation and activity. Employing the hormone regulated
Cre recombinase MerCreMer we developed a method for inducible
gene expression in mamalian cells. By inducibely expressing the BCR
we demonstrate that the phosphorylation of SLP-65 and Syk is
dependent on BCR expression. These data suggest that SLP-65 and Syk
is reorganised by the BCR into an active signalling complex. The
implication of these data for the signalling function of the pre-BCR and
BCR will be discussed.
Abstracts FEBS'99
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A protein kinase cascade has been dissected that plays a key role
in mediating the insulin-induced stimulation of glycogen synthesis.
In this cascade, insulin stimulates the activation of protein kinase
(PKB) which then inactivates glycogen symhase kinase-3 (GSK3),
leading to the dephosphorylation and activation of glycogen synthase
and hence its the stimulation of glycogen synthesis. The insulin-induced
activation of PKB requires its phosphorylation at two residues,
Thr308 and Ser473, and is prevented by inhibitors of
phosphatidylinositide (Ptdlns) 3-kinase. A protein kinase that
phosphorylates Thr308 has been identified and termed
3-phosphoinositide-dependent protein kinase-1 (PDK1) because it
only phosphorylates PKB in the presence of Ptdlns(3,4,5)P3
(the product of the Ptdlns 3-kinase reaction) or Ptdlns(3,4)P2.
In this talk, the likely identity of the Ser473 kinase will be revealed and
the mounting evidence that suggests that a wider role for the
PDK1/PKB/GSK3 cascadein insulin signal transduction will be reviewed.
Reference.
[1 ] Cohen, P. (1999). Phil.Trans.Roy.Soc.Lond.B 354, 485-495
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A. Ullrich
Max-Planck-lnstaut fur Biochemie,, 82152 Martinsried, Germany
Angiogcnesis, the formation of new blood vessels from preexisting ones, and the
permeabday of blood vessels are regulated by vascular endothehal growth factor (VEGF) via
its two known receptors Fhl (VEGFR-I) and KDR/FIk-1 (VEGFR-2). The Fit4 receptor
tyrosme kmase ts related to the VEGF receptors, hut does not bind VEGF and its expression
becomes restricted mainly to lymphatic endothelia during development. Heterozygous Fit4
knock-out locus containing a LacZ cassette in place of the Flta first exon gives staining
lymphatic endothelium and homozygous knock-outs die due to lailare of proper vascular
formation. We have purified the Flt4 ligand, VEGF-C, and cloned its cDNA from human
prostatic carcinoma. Whde VEGF-C Ls homologous w~th other members of the
VEGF/platelet derived growth factor family, it is made as a precursor protein having an
extended N-terminus and a C-terminal half containing extra cysteine-rlch motifs characteristic
of a protein component of silk. VEGF-C is proteolytically processed, and brads and acUvates
Fh4, which we rename as VEGFR-3. Transgemc mice expressing VEGF-C under a basal
keratin promoter developed a hyperplastic lymphatic vessel network m the skin. VEGF-C is
thus a novel regulator of endotheha. However, proteolytically processed VEGF-C was also
capable of stimulating VEGFR-2 and was weakly anglogemc. VEGF-C also reduced vascular
permeability, but its point mutant, which actwated only VEGFR-3 did not. VEGF-D is
closely related to VEGF-C, proteolytlcally processed and binds to the same receptors. Thus,
VEGF-C appears to be an angmgenic and lymphangiogenic growth factor. Another related
novel growth factor, VEGF-B was also cloned and found to be co-expressedwith VEGF and
VEGF-C m heart, muscles and less m other tissues. VEGF-B bound VEGFR-1, formed ceil
surface-assocmted, disulfide-hnked homodimers and heterodimers with VEGF when
coexpressed. Our results suggest that VEGF-B has a role in endothelial cell growth and
angmgenesis, particularly in skeletal muscle and heart.
Tie, one of the receptor tyroslne kmases we have cloned, is expressed m mouse
hematopoleuc stem cell fracaons and m all studied fetal endothelial cells. Both Tie and its
hgand are also highly expressed m several human megakaryoblast~cleukemia cell lines. In
transgemc mice the Tie gene promoter directs endothehal specific expression of heterologous
genes. Mouse embryos homozygous for a disrupted Tie allele developed severe edema, their
microvasculature was ruptured and they died between days 13 5 and 14.5 of gestation Thus
Tie is required during embryonic development for the sprouting of new vessels, particularly in
the regions undergomg anglogenic growth of capillaries, but it is not essential for
vasculogenesis. Our results thus demonstrate an increased complexity of signaling for
endothelial cell proliferation, migration, differentiation and surwval. Knowledge of these
signals is essential for the control of anglogenesis in a variety of diseases including cancer.
For a review, see: Korpelainen, E. and Ahtalo, K.: Signaling anglogenesls and
lymphanglogenesis. Current Opinion in Cell Biology 10: 159-164, 1998
s66
Abstracts FEBS'99
The Ras Superfamily of small G proteins includes the Ras, Rho and Rab
families. They act as molecular switches controlling key cellular
pathways, which can be altered in disease states. Thus, they have
potential as targets for chemotherapeutic agents. In their active GTP
botmd form, they bind to protein effectors. Often one small G protein
can bind multiple unrelated effectors and hence control several
pathways. They are down-regulated by an intrinsic GTPase, stimulated
by GTPase-activating proteins (GAPs) and upregulated by exchange
factors (GEFs). Inhibitors of small G protein action could be designed to
have one of several mechanisms, e.g. interference with post-translational
modification, with the protein:protein interaction with effectors or with
the GTPase cycle. The latter two mechanisms have the potential for a
high level of target selectivity. Approaches being taken to aid their
evaluation will be described. We have developed biophysical techniques
using fluorescence, isothermal titration calorimetry and scintillation
proximity to quantify and characterize protein:protein interactions such
as Ras with Raf or RasGAPs; Rho/Cdc42/Rac with RhoGAP, PAK,
ACK and WASP. Analysis ofmutagenesis and structural studies
suggests that inhibitors could achieve high selectivity for modulating a
specific effector-driven pathway. Studies on the structure and
mechanism of GAPs, by ourselves and others, show that Ras and Rho
GAPs increase the intrinsic GTPase by contributing a critical arginine
residue to the active site. We have investigated the role of this arginine
in stabilizing the putative transition state. These data suggest that
modulation of GTPase activity by small molecules could be an attractive
target.
Mechanism
proteins?
of ARFI activation:
a model
for small
Abstracts FEBS'99
s67
s68
Abstracts FEBS'99
of
Abstracts FEBS'99
s69
s70
Abstracts FEBS'99
Abstracts FEBS'99
s71
Recent decades have seen large increases in world wheat grain yields. This
so-called 'Green Revolution' is in part due to the widespread adoption of
varieties containing the semi-dwarfing Rht mutant alleles, and of associated
changes in agricultural practise. These yield increases have enabled wheat
productivity to keep pace with the demands of the rising world population.
Like Rht mutant alleles in wheat, the gai mutant allele of Arabidopsis
confers a semi-dominant dwarf phenotype, and a dramatic reduction in
responsiveness to the plant growth hormone gibberellin (GA). The
Arabidopsis GA1 and RGA genes have been cloned. These genes encode
closely related proteins (GAI and RGA) that are members of a class of
putative transcriptional regulators defined by the Arabidopsis SCR product.
Recently, we have found that the DNA sequences o f Rht (and D8, the maize
orthologue) are closely related to those of GA1/RGA. Analysis of mutant D8
and Rht alleles suggests that the wild-type proteins (GAI, RGA, D8, Rht)
are bi-partite in structure, with an N-terminal GA-specificity domain, and
a C-terminal putative transcriptional regulator domain. These proteins
appear to act as repressors of stem elongation, whose activity is opposed by
GA. The mutant proteins are altered in ways that make growth repression
relatively resistant to the effects of GA. The possible biotechnological
significance of these findings will be discussed.
s72
Abstracts FEBS'99
The plant hormone jasmonic acid (JA) plays regulatory roles on plant
development and responses to environmental stresses, such as mechanical
wounding or pathogen attack. Upon wounding, increased de n o v o synthesis
results in higher endogenous JA levels, which trigger the activation of
wound-inducible genes. Jasmonates are synthesized through the octadecanoid
pathway from linolenic acid, the most prevalent fatty acid in plant membrane
lipids. Free linolenic acid is substrate of a lipoxygenase (LOX), which
converts it with positional specificity to either 9- or 13-hydroperoxy linolenic
acid. Allene oxide synthase (AOS) uses the latter hydroperoxide as a substrate
yielding an unstable allene epoxide which after cyclation gives rise to 12-oxophytodienoic acid. Alternatively, hydroperoxide lyase (HPL) action on 13hydroperoxy linolenic acid diverts the pathway to products which are not
precursors for JA. Conversion of linolenic acid to 12-oxo phytodienoic acid
is likely to occur in chloroplasts. Further processing to JA involves a
cytoplasmic reductase and ~-oxidation, likely to occur in peroxisomes.
To further understand the role of JA in plant development and in the response
to wounding, we have isolated and characterised potato cDNAs encoding
some of the enzymes potentially involved in the biosynthesis of this hormone,
namely a plastidial 0)3 fatty acid desaturase, two distinct 13-LOX, HPL and
an AOS homologue. Their patterns of expression along plant development
and upon wounding and JA treatments have been investigated. The majority
of genes coding for JA-biosynthetic enzymes are transcriptionally activated by
wounding and some of them are also activated by JA, allowing a positive
feed-back regulation of the biosynthetic pathway. Transgenic potato plants
have been obtained in which the expression of these genes is greatly reduced
due to co-suppression or antisense-mediated depletion of their mRNAs. The
effects of reducing the levels of these enzymes have been analysed in the
transgenic lines in terms of plant development and tuberisation, JA content,
and responses to wounding and pest and pathogen attack.
Abstracts FEBS'99
s73
The ovule represents the major female reproductive organ in higher plants.
Furthermore, it has recently been established as an excellent model system to study
organogenesis at the genetic and molecular level. V~ and others have isolated alarge
number of mutants with a defect in ovule development and the ongoing genetic and
molecular characterization of these mutants provides further insight into the
mechanisms underlying several aspects of ovule development such as primordium
outgrowth, specification of identify, pattern formation and cellular differentiation
[tl.
Early ovule development is in part characterized by the progressive establishment
of three proximal-distal (P-D) pattern elements during the outgrowth of the ovule
primordium [2}. The distal element gives rise to the nucellus which forms the
megaspore and eventually the embryo sac containing the egg cell. The central
element develops into the chalaza with the inner end outer integuments, the
progenitor tissues of the seed coat, and the proximal element gives rise to the
funiculus or stalk with the vascular strand. What genes control the formation of this
pattern and how do they accomplish it ? We have identified and cloned a novel gene,
(N,ZZ) ,which controls the formation of the distal or nucellar pattern element.
Plants lacking NZZ function fail to form a nucellus and variably affect the
development of the chalaza, the NZZtoous encodes a 314 aa basic protein with no
homology to entries in the databases. Mutations in the hemeobox gene BELL (BELl)
lead to the development of outgrowths of previously unknown identity in place of the
outer integument. We provide evidence that these outgrowths are of nucellar
identity indicating that the central element is assigned a new distal identity in bell
mutants. In the case of a simultaneous absence of NZZ and BELl function in the
central element this domain experiences a shift to a more proximal identity and
gives rise to a funicutus-like structure. Our genetic and molecular analysis of nzz
and bell mutants indicates that N;EZ and BELl control P-D patterning in the distal
two-thirds o1 the ovule primordium through mutual antagonistic interactions.
[1] Schneitz et aL, Trends Plant Scl. 3, (1998) 468.
[2] Schneitz et al., Development, 125, (1998) 2555.
s74
Abstracts FEBS'99
The
resurrection
plant
Craterostigma
plantagineum
(Faro.
Scrophulariaceae) is being used as an experimental model system to
understand pathways leading to desiccation tolerance. Analysis of gene
expression in this plant has shown that desiccation tolerance involves many
different pathways. A major pathway during dehydration is the synthesis of
LEA proteins. Many genes encoding LEA proteins have been isolated.
There is plenty of evidence to suggest that the synthesis LEA proteins is a
major factor of desiccation tolerance. In order to address the function of
LEA proteins transgenic plants were created which overexpress LEA
proteins and results will be discussed.
The synthesis of LEA proteins is regulated on the transcriptional level and a
major focus is the isolation of transcription factors which regulate several
down-stream genes. Two putative transcription factors have been isolated:
one (HDZIP-I) is structurally closely related to the family of the
homeodomain leucine zipper gene family and the other one (HSF-I) to the
family of the heat shock transcription factor. Their molecular analysis will
be presented.
Besides the plant hormone abscisic acid lipid based signalling molecule
are suggested to rapidly to convert metabolism in the unstressed planl
towards a metabolism which is directed towards the synthesis of desiccation
protective substances such as LEA proteins. The different signal molecules
will be discussed.
Abstracts FEBS'99
s75
Arabidopsis thaliana
J Salinas
Departamento de Alejora Gen~ttcay Btotecnologia, I VL-~, ( "arretera de
la Coruha, Km 7, 28040 Aladrtd, Spare
s76
Abstracts FEBS'99
Y-J"
"
~R.S)~po~de
OHOH
~ _ . (-h~,?,~-~ . r - ~ - ! - ~
.;g;,~..Y--J" "
U-J" "
(S)~pox,aa
(R)~
References
[1] Milne & Malthouse, Biochem. J., 314, (1996) 787.
[2] Fitzpatrick & Malthouse, Eur. J. Biochem., 252, (1998), 113.
[3] Mahon et al., Febs Lett., 427, (1998), 74.
Abstracts FEBS'99
s77
s78
Abstracts FEBS'99
Bacterial methane oxidation is known to be effected by oxygendependent methane monooxygenase enzymes that form methanol as the
stable product. In Methylococcus capsulatus (Bath) this reaction is
catalysed by either a soluble enzyme (sMMO) that contains a diiron
oxo-bridged hydroxylase component or a copper-containing
membrane-associated enzyme (pMMO) in which the nature of the
active site species is presumed to contain copper. The sMMO complex
has been shown to be comprised of three components (hydroxylase,
reductase and regulatory protein) in which NADH2 reacts with the
reductase and 02 and methane interact with the hydroxylase. Recent
studies by small angle X-ray scattering techniques have indicated that
the reductase interaction with the hydroxylase brings about a
significant structural alteration in the latter and is a prelude to the
overall activation process. The opening up of the diineric hydroxylase
permits access of the substrates (02, CH4 and electrons) to the diiron
active site and it appears that the regulatory protein may well serve to
stabilize this particular conformation. In this presentation 1will show
how biophysical studies on the complex have been used to indicate
how methane is bound to the enzyme and activated by a high valent
ferryl species to form the product methanol.
Abstracts FEBS'99
s79
17 Extremophiles
Extremophiles and their adaptation to hot environments
K. O. Stetter
Lehrstuhl fiir Mikrobiologie, University o f Regensburg,
Regensburg, Germany
Water-containing terrestrial, subterranean and submarine hightemperature areas harbour a variety o f hyperthermophilic bacteria and
archaea which are able to grow optimally above 80C.
Hyperthermophiles are adapted to their hot environments by their
physiological and nutritional requirements. As a consequence, cell
components like proteins, nucleic acids and membranes have to be
stable and even function best at temperatures around 100C. The
chemolithoautotrophic arehaeon Pyrolobus fumarii is able to grow at
113C and, therefore represents the upper temperature border o f life.
For the first time (vegetative) cultures o f Pyrolobus and its close
relative Pyrodictium are observed to be able to survive autoclaving
(lh; 121C; 2bar).
Proteins and Membranes from Extreme Halophiles: StructureDynamics-Function Relations depend on Solvent Interactions
G. Zaccai
IBS/CNRS-CEA Jean-Pierre Ebel, 41 rue Jules Horowitz
38027 Grenoble Cedex 1
Proteins and membranes from the extreme halophiles are richly informative models for
the study of solvent effects and interactions.
Two decades ago, it was shown that halophilic proteins bound exceptionally large
amounts of solvent ions in the concentrated salt solutions where they are stable and
soluble [l]. The extent of salt and water binding by the folded protein depends on the
nature of the salt as does the thermodynamics of protein stabilisation [2, 3]. A
solvation-stabilisation model was proposed, in which hydrated salt ions interact
specifically with carboxyl groups on the protein surface, stabilising the fold. Halophilic
adaptation, therefore, would involve a tertiary structure capable of these solvent
interactions. The high resolution crystallographic structure of an extreme halophilic
malate dehydrogenase mutant [4], combined with site-directed mutagenesis [5] has
recently provided detailed information showing that these ideas were basically correct
but that a wider range of interesting solvent interactions is involved, including novel
features such as ion-binding complex salt bridges stabihsing protein subunit
interactions and a large cavity of ordered water molecules at the centre of the enzyme
tetramer.
The solvent environment also has important effects on molecular thermal dynamics that
allow it to be related to biological function. The dependence of dynamics on
temperature and hydration in purple membranes from the extreme halophile,
Halobacterium salinarum, was measured by neutron scattering and strong correlations
were establsihed between the nature of thermal motions and functional aspects such as
much slower conformatinnal changes associated with the light activated proton
pumping activity of the membrane [6, 7].
s80
Abstracts FEBS'99
early
Ma.r-Planck-hl.~titut
tti/ Immunbiologie,
Stubeweg
D-7010S l:rcthurg, Germany
5f.
s81
s82
Abstracts FEBS'99
Activities of the actin cytoskeleton depend on the intracellular redistribution of proteins and their assembly into functional complexes at
the leading edge of a cell, at a phagocytic cup, or in the cleavage furrow.
Three actin-binding proteins will be analysed using GFP-fusions:
coronin, a member of the WD40 repeat family of regulatory proteins,
cortexillin, a member of the spectfirdc~-actinin family, and the tail
domain of talin. Their re-distribution is analysed in the highly motile
cells of Dictyostelium, where chemotactic stimulation induces actin reassembly within less than 10 seconds and cytokinesis takes only 2
minutes, Mitotic cell division in Dictyostelium is of interest for two
reasons.
(1) When anchored to a substratum these cells do not need myosin II in
order to make a cleavage furrow [1]. Therefore, the importance of other
proteins is obvious. (2) Two of these proteins, coronin and cortexillin,
sort out during cytokinesis: coronin is accumulating in ruffles at the cell
poles and cortexillin is targeted to the cleavage furrow. Domain analysis
of eortexillin 1 revealed that the infbrmation for translocation to the
furrow resides in a fragment of 93 amino-acid residues comprising a
PIP_, binding motif. This C-terminal fragment is also capable of rescuing
cytokinesis in cortexillin I-null mutants [2]. Mechanisms of protein
translocation during mitotic cell division will be discussed.
Abstracts FEBS'99
s83
s84
Abstracts FEBS'99
Abstracts FEBS'99
Self-assembly of polyglutamine-containing
huntingtin fragments into amyloid-like fibrils
and implications for the pathology
of Huntington's disease
E. Wanker
Max-Planck-lnstitut fftr Molekulare Genetik, lhnestrasse 73,
D-14195 Berlin (Dahlem), Germany.
s85
s86
Abstracts FEBS'99
Entry of Shigella into epithelial cells winch are not professional phagocytcs revolves a
complex signalling pathway that elicits a macropinocitic event leading to internalization
of the bacterml body. Upon contact w~ththe cell surface, S. fle.u~ert acttvatc~ a Mxi/Spa
specialized secretory apparatus through which Ipa invasms are secreted, two of which
(IpaB, 62 kDa and IpaC, 42 kDa) form a complex which resorts as a pore In the
eukaryotic cell membrane where It serves two purpo~c~,it permits ~qn3echon,of bacterial
porteins such as IpaA and IpaD into the cytoplasm. It also elicits major rearrangements of
the host cell cytoskeleton, essentially tile polymerization of actin filaments that m'e all
similarly polarized with their positive ends onentcd towards the inner face of the
cytoplasmic membrane. Activation of the cascade of small GTPases (i.e. Cdc42, Racl and
Rho) by the IpaB-IpaC complcx accounts for thcsc evcnts. These actin filaments lbrm
plastin-mediated bundles that support membrane projccttons which achieve bacterial entry.
The tyrosme kinase pp60~~: act as a regulator that amphfies the extension of cellular
projecuons by down-regulating the rho-mcdmtcdsignals. Ezrin, which *s actively rccrmted
in the cellular projections, also plays a major role ill the extension of tho cell surface
projections that engulf the bacteria. Shigella subscquently mduces tile formation of an
adherence plaque at the cell surface In order to promote its entry. The entering bacterium
allows translocation of another Ipa protein, ipaA, which binds amd activates vmculin
thereby completing maturatton of the entry focus by inducing the formation of a dense
actin cup. Once intracellular, tile bacterium lyses its phagocytic vacuole, escapes into the
cytoplasm and starts moving by reducing polar, directed polymerization of actm on its
surface, due to the expression of IosA, a 120 kDa outer membrane protein which becolncs
locahzed at one pole of the mtcroorganlanl, lbllowing cleavage by SopA, a plasmidencoded surface protease. N-WASP appears to bc a key ligand of IcsA for actm
polymerization. In the context of polmlzed cpithehal cells, bacteria then reach the
intermedlatejunctmn and engage their components, particularly the cadherins, to form a
protrusmn which is actively mternahzed by the adjacent cell. Bacteria then lysc the two
membranes, reach the cytoplasmic conlpartment again, and re~,unle actin-driven
movement.
gastric mucosa
T. BorOn
Dept. of Odontology,Ume~ University,SE-901 85, Ume~i,Sweden
Abstracts FEBS'99
s87
D.Shmerling,
Posters
s91
(S~5.1~0~
(811/5.1/004)
s92
(Su/5.1/005)
Abstracts FEBS'99
(Su/5.1/006)
UmagasserG, Hear,armM, R ~
H and Berg~P
lnstiUe forBkanxikalAgog Researchof theAttsaim
,~atm'ty of Scias:es
[1J Maucuer at al., Proc. Natl. Acad. Sci. U.S,A., 92, (1995) 3100,
[2~ Maucuer etal., J. Biol. Chem., 272, (1997) 23151.
(Su/5.1/007)
Mammahan cells are able to sense oxygen and regulate a number of genes
in response to hypoxia (EPO, VEGF,...). The transcription factor HIF-1
was identified as an important key component of the hypoxia sensing
system. HIF-1 is a heterodimer of two members of the basic helix-loophelix transcription factor superfamily containing a PAS (Per-ARNT-SIM)
domain : HIF-Ic~ and HIF-II3/ARNT. Recently, an increasing number of
closely related proteins were found (HIF-2a, HIF-3ct, ARNT2, ARNT3).
The several putative dimers could be implicated in multiple signaling
pathways.
During the cloning of the already described H I F - l a subunit, we isolated an
additional eDNA clone. PCR analysis and sequencing reveals that this
clone lacks 127 bp ofexon 14 compared to wild type HIF-Ict.
The rnRNA of this small form is expressed in several human cells lines
(293, HeLa, HepG2), human skin, but apparently not in rodents.
Western blot analysis of the putative form (HiP-let TM) shows a lesser
molecular weight than wild type H I F - l a s~-(~.
When compared in transient transfection assays, both recombinant proteins
HIF-10. TM and H I F - l a 826 were shown to dimerize with HIF-I I3/ARNT and
to activate the VEGF promoter upon hypoxia. However, the shorter
HIF-16t isoform was 3-fold less active than H I F - l a 826, a result consistent
with the lack of the C-terminal transactivation domain. As expected, this
small isoform competes with the endogenous as well as the transfected
wild type HIFI~.
One of the crucial question now is to evaluate whether this spliced variant
protein is expressed in human cells, and if yes, to determine the ratio
3~
[HIF-1ff.736/ HIF-Iff. 7 ], half life, regulation and exact role of this protein
in hypoxic stress.
(Su/5.1/008)
The sequence elements determining the nuclear export of RNA are generally
not well characterized. These elements are however crucial since the
exported RNAs have to be selected from a large population of nuclear RNA.
We have characterized the export determinants of the adenovirus VA1
RNA, which is produced by RNA polymerase III. We found that the
terminal stem of the VAI R N A is necessary and sufficient for its nuclear
export in mammalian cells, yeast and Xenopus oocytes. This stem has the
RNA 5' end bases paired with its 3' end and leaves only Y terminal Us
unpaired. With a detail mutagenesis of this stem, we have shown that some
specific features are required to make it competent for export. Specifically,
the stem should start with the RNA 5' end, should be longer than 12
nucleotides and should have the RNA 3' end following the stem, between 3
to 8 bases away. Remarkably, pollIl RNA of artificial sequences that
present a such terminal stem are efficiently exported as well. This suggest
that any RNA that can fold according to these rules will be efficiently
exported from the nucleus to the cytoplasm+ regardless of its primary
sequence.
In conclusion, we have discovered a highly degenerate motif, the terminal
stem motif, that promotes efficient export of pol III RNA, in many different
eucaryotes. This discovery is of direct practical interest, since the terminal
stem motif can he used to efficiently deliver therapeutic RNA such as
ribozymes, antisenses or aptamers, to the cell cytoplasm.
Key words: nuclear export, pol III transcripts, terminal stem+
Abstracts FEBS'99
(Su/5.1/009)
s93
s94
Abstracts FEBS'99
(Su/6.1/Oll)
References:
[1] Sandman K, Pereira SL and Reeve JN (1998) CMLS, 54, 1350-1364
12l Reeve JN, Sandman K and Daniels CJ (1997) Cell, 89:999-1002
[3] Luger K, M/ider AW, Richmond RK, Sargent DF and Richmond TJ (1997)
Nature, 389:251-260.
(Su/6.1/012)
('henn~tr~'. ,Vovowbtrsk.
Ru.~ta
(Su/6.11013)
SUMMARY
Actinomycin
D a n d t x - a m a n i t i n are c o m m o n l y
u s e d to
inhibit transcription.
U n e x p e c t e d l y h o w e v e r , it c o m e s out
that the transcription
o f the h u m a n
immunodeficiency
v i r u s ( H I V - 1 ) l o n g t e r m i n a l r e p e a t s ( L T R ) is a c t i v a t e d in
h u m a n a n d m u r i n e c e l l s e x p o s e d to t h e s e d r u g s w h e r e a s
the
Rous
sarcoma
virus
(RSV)
LTR,
the
human
cytomegalovirus
immediate
e a r l y g e n e ( C M V ) a n d the
HSP70 promoters
are r e p r e s s e d .
T h i s a c t i v a t i o n is a
c h a r a c t e r i s t i c o f the H I V L T R but i n d e p e n d e n t of the N F ~ B
and
TAR
sequences.
In c o i n c i d e n c e ,
the
average
p h o s p h o r y l a t i o n o f the C - t e r m i n a l d o m a i n ( C T D ) f r o m the
l a r g e s t s u b u n i t o f R N A p o l y m e r a s e II is e n h a n c e d in c e l l s
t r e a t e d w i t h a c t i n o m y c i n D and o~-amanitin.
Both the H I V 1 LTR activation
a n d the b u l k C T D p h o s p h o r y l a t i o n
enhancement
are
prevented
by
several
CTD
kinase
inhibitors,
including
5,6-dichloro-1
-8-Dribofuranosylbenzimidazole
(DRB).
T h e e f f i c a c i e s o f the
various compounds
to b l o c k C T D p h o s p h o r y l a t i o n
and
transcription
in
vivo
c o r r e l a t e w i t h t h e i r c a p a c i t i e s to
i n h i b i t the C D K 9 / P I T A L R E
k i n a s e in v i t r o .
H e n c e , this
kinase
is l i k e l y
to c o n t r i b u t e
to the a v e r a g e
CTD
phosphorylation
i n v i v o and to the a c t i v a t i o n of the HIV-1
L T R i n d u c e d by a c t i n o m y c i n D.
Abstracts FEBS'99
(S~6.1~1~
s95
(Su/6.1/015)
HDFI (yKU70), coding for the yeast homolog of the human DNA-PK
(Su/6.1/016)
(Su/6.1/O17)
s96
(Su/6.1/018)
Abstracts FEBS'99
(Su/6.1/020)
(Su/6.1/020)
function
Univ.
Regulation
in vivo.
of
Texas
of ehromatin-mediated
L. Rastelli and S.
M.
D.
Anderson
Cancer
It has recently been proposed that the histone (H3-H4)2 tetramer undergoes
structural changes, which allow the particle to accommodate both negatively
and positively constrained DNA [1]. We have demonstrated in vitro, using a
single nucleoprotein particle assembled on a topologically constrained DNA
minicircle [2], that adducts on the single histone H3 cysteine, which have no
effect on the structure of the nucleosome, limit the structural transitions that
the (H3-H4)2 tetrameric nucleoprotein particle can undergo [3] We have
used the same approach to investigate the role of the historic tails in the
dynamics of the nucleosome. We have either cleaved the tails by treating the
particles with clostripain or have deleted them by mutating the genes and
expressing the histones in E. coil Removal of the histone tails did not affect
the structure of the nucleosome. In contrast, in the absence of H2A-H2B
removal of histones H3 and H4 tails dramatically affected the structure of
the tetrameric nucleoprotein particle such that the DNA now adopted a
relaxed conformation. The effect of histone tail acetylation was also
investigated, either using hyperacetylated histones isolated from cells
treated with butyrate or trichostatin A, or histones treated in vitro with
recombinant histone acetyltransferases. Hyperacetylation of histone H3 and
H4 tails does not affect the structure of the nucleosome. In contrast it
induced significant change in the structure of the tetrameric nucleoprotein
particle. These results provide new insights on the possible role of histone
acetylation/deacetylation in transcription control.
[1] Hamiche et al., Proc. Natl. Acad. Sci. USA, 93, (1996), 7588.
[2] Goulet et al. Nucleic Acids Res., 15, (1987), 2803.
[3] Hamiche et al., J. Biol. Chem, 273, (1998), 9261.
enhancer
Majumder.
(Su/6.1/021)
The protein Setl from Saccharomyces cerevisiae has been identified by the
presence of a specific domain, the SET domain, common to many chromatin
associated proteins. It has been shown, that deletion of Setlp alleviates
telomeric proximal effects (TPE) (1). We found, that Setlp physically
interacts with Mec3p through its SET domain (2). Mec3p is a checkpoint
protein required for delay of the cell cycle after DNA damage. Our results
show, that the deletion of SET1 increases the viability after DNA damage of
mec3 mutants but also of other checkpoint mutants (radg, radl7, rad24), in a
process mostly independent of Rad53p, a signalling kinase involved in
checkpoint control. Nevertheless, SET1 deletions do not restore any of the
three DNA-damage checkpoint responses regulated by Mec3p. In addition,
we found that, contrary to the deletion of SETI, deletion of MEC3 enhances
TPE and even attenuates the silencing defect of a set1 mutant. Moreover,
restoration of TPE in a set1 mutant by overexpression of the isolated SET
domain requires Mec3p. Finally, unlike set1 mutants which show slight
telomere shortening, mec3 mutants have elongated telomeres, suggesting that
Mec3p negatively regulates telomere length. Our results suggest that Setl and
Mec3 have antagonistic effects on two processes regulated by chromatin
structure: repression of telomere-proximal transcription and telomere length
maintenance. Recently, it has been shown that SET domain proteins can
interact with phosphatases and antiphosphatases and that this interaction is
involved in the regulation of cell differentiation (3). By analogy, Set1 and
Mec3 may exert their antagonistic functions through the phosphorylation of
until now undetermined, common targets.
Abstracts FEBS'99
(Su/6.1/022)
(Su/6.1/024)
s97
(Su/6.1/023)
s98
Abstracts FEBS'99
(Su/9.1/026)
Sec7 domains are all helical domains of 200 amino acids, which
catalyze GDP to GTP exchange on ARF, a small GTP-binding protein
involved in vesicular trafficking. Sec7 domains feature a hydrophobic groove,
which is the binding site for ARF, and an essentml glutamate residue which
destabilizes GDP and Mg 2 on ARFI. The exchange activity of some
members of the Sec7 family, such as the yeast proteins Geal/2p is inhibited
by the fungal metabolite Brefeldin A (BFA). Other members of this family,
such as the mammalian protein ARNO, are BFA resistant. In yeast, a genetic
approach has shown that the BFA sensitivity depends on some residues of the
Sec7 domain [1, see also the abstract of Peyroche et al.]. These residues
cluster in a small patch, which overlaps the binding site for ARF. For
instance, replacing the adjacent residues F190-AI91 in the hydrophobic
groove of ARNO-Sec7 by the cognate residues of Gealp (an Y-S pair),
renders ARNO-Sec7 sensitive to BFA in vitro and in vivo.
The BFA sensitivity of the F190Y-A 191S mutated form of ARNOSec7 was studied in vitro, using [A17]ARF1-GDP, a soluble truncated form
of ARF1, as a substrate. Preincubation of BFA for few seconds with both
[F 190Y-A 191S]ARNO-Sec7 and [A17]ARF I-GDP was reqmred for
inhibition. Furthermore, increasing the [A17]ARFI-GDP concentration,
increased BFA inhibition of SecT-catalyzed nucleotide exchange. Thus,
despate the fact that the Y-S pair of See7 domains belongs to the binding site
for ARF, BFA does not act as a competitive inhibitor. Further analysis of the
kinetics of GDP/GTP exchange at various [A17]ARFI-GDP and BFA
concentrations shows that BFA acts as an uncompetitive inhibitor, freezing
[A17]ARFI and the Sec7 domain in an abortive complex, m which GDP/GTP
exchange is dramatically slown down. Gel-filtration analysis using [3H]GDP
labeled [A17]ARFI-GDP shows that this abortive complex contains GDP. We
suggest that B F A is trapped at the interface between ARF1-GDP and the Sec7
domain, and hinders the conformational change in the switch regions of
ARF1, that accompanies the release of GDP.
[ 1] Peyroche et al. Molecular Cell, in press (issue of March 1999)
(Su/9.1/027)
Membrane fusion machinery is involved in post transGolgi cleavage of Semliki Forest Virus precursor p62
A.M. Band, J M~tta, L K~_ri~iinen, E Kuismanen
Dtvision of Btochemtstrv, Umversity of Helsinkl, Finland
Many biologically active proteins, peptide hormones and viral proteins are
initially synthesized as large inactive precursors which are activated by
proteolytic cleavage. Semliki Forest Virus (SFV) spike glycoprotein precursor
p62 is cleaved to E2 and E3 by the membrane associated calcium dependent
serine endoprotease furin. When BHK 21 cells are infected by SFV, and p62
precursor is accumulated to trans-Golgi network (TGN) at 20C there is no
cleavage of p62. By increasing the temperature to 37C the transport block is
released and cleavage occurs. We have previously demonstrated that exit from
TGN is needed for the cleavage of p62 and that there is communication
between early endosomes and this post TGN compartment [ 1]. We have now
investigated the possible involvement of membrane fusion machinery
in the cleavage of p62 by using streptolysin O (SLO)-permeabilized BHK 21
cells. The lost cytosol was replaced by using rat brain cytosolic extract
N-ethylmaleimide (NEM)-sensitive fusion protein (NSF) is inactivated by
alkylating agent NEM. Treating the cells and the cytosol with 1 mM NEM
caused the inhibition of the cleavage of p62 (control 26.9_+2.7%; I mM NEM
2.5_+1.3%, mean _+SE, n=3-4 observations). A recombinant NSF stimulated
the cleavage of p62 in the SLO-permeabilized cells (control 26.6_+0.7%,
I~M NSF 37.0_+ 1 0%, mean_+SE, n=4 observations, p<0 01 versus contol,
t-test) Soluble NSF attachment protein (SNAP) binds and activates NSF. We
used c~SNAP (L294A) mutant, which binds but does not activate NSF. ~SNAP
mutant inhibited the cleavage of p62 in SLO-permeabilized BI-[K 21 cells
(control 26.3_+0.7%; 200 lJg/ml c~SNAP mutant 5 1_+09%, mean_+SE,
n=3 observations) Rabs are the small GTPases which are implicated
in the regulation of the membrane fusion. Rab GDP-dissociation inhibitor
(GDI) binds the GDP-bound, inactive form of Rab An excess of recombinant
GDI caused inhibition of the cleavage of p62 in the SLO-permeabilized BHK
21 cells (control 100%, 5 ~M GDI 48.9_+5 7%, mean_+SE,n=3 experiments).
These results suggest that membrane fusion machinery is involved in
the cleavage of p62 in the post TGN site.
References: [1] Sariola et al., J.Cell Sei., 108, (1995) 2465.
[1] Pfeffer S.R., Annu. Dev. Cell Dev. Biol., 12, (1996), 441
[2] Hoekstra et al., Biochemistry, 23, (1984), 5675.
(Su/9.1/028)
Abstracts
s99
FEBS'99
(Su/9.1/029)
(SuP).I/030)
(Su/O.1/031)
The rapid growth of pigs in the perinatal period puts a heavy demand on their
hematopoietic system. At birth, the hormone regulating erythropoiesis,
erythropoietin (EPO), is barely detectable in plasma. After birth, the activity
increases greatly the first 1-2 days, wbereafter it drops rapidly [1]. These
changes in Epo activity are not easily explained on basis of current concepts
on regulation of Epo secretion.
in piglets not supplemented with iron, a serious anemia develops
during the first 1-2 weeks after birth. InJection of iron (180 mg
subcutaneously) in two weeks oId piglets results in a marked increase in Epo
activity [2]. A similar response to iron has been observed in mice. We have
now demonstrated that the response to iron is dependent on the hemoglobin
(Hb) status of the animal. In two weeks old piglets with Hb below 60 g/l, the
Epo activity in plasma on an average increased 5-fold during the first 24 h
after injection, whereas the corresponding changes in iron treated piglets
with Hb above 60 g/l and in untreated controls were insignificant.
In adults, there exists a correlation between Hb and the Epo activity
in plasma. In neonatal mice and humans, significant correlations between Hb
and plasma Epo has not been found. Such observations have led to the idea
that other factors than tissue availibllity of oxygen might be important in the
regulation of Epo in the early postnatal period. In the two week old piglets
examined in the present study, however, a high correlation between log
plasma Epo and Hb was found (r2--0.75, n=50, p<0.001 ).
Bleeding of prenatal piglets (-5 days) greatly increased the level of
EPO mRNA in liver, while the kidneys responded moderately. These
findings are in contrast to observations in adult humans and mice where the
kidneys are responsible for the EPO response to an anemic stress. Data on
the relative contribution of the liver and kidneys to the EPO activity in
normal and bled perinatal piglets will be presented.
References:
1. Sjaastad, O.V. et al. Acta Vet. Scand. 33 (1992) 249.
2. Sjaastad, O.V. et al. Acta Vet. Scand. 37 (1996) I33.
(Su/0.1/032)
Identification of critical motives in the proneurotensin for its processing and regulated secretion
S.FELICIANGELI. P.KITABGI, and J-N BIDARD lnstaut de
Pharntacologw Moldcuhure et Cellulat~ e, CNRS, Valbotme, France.
I
I
c
pro-region
KR KR RRKR
IIIIIIIIV/AINI I
n__.l I
U~l
NN NT tail
s 100
(Su/9.1/033)
Abstracts F E B S ' 9 9
(Su/9.1/034)
Abstracts FEBS'99
(Su/9.1/037)
s 101
B. L e ~ n ,
(Su/9.11038)
~__.o~
or
,f~
. and
~s
Peyro=/~"~,B.
An~rmy, S. Robhezu, J. ~.k~r* md C. JaScson*.*SI~GM CEA/Sc~.
91191 G~sl~YvetteCo:kx IPMC CNRS. 06560Vdtx*um
(Su/9.1/040)
s102
Abstracts FEBS'99
(s~9.1~aa)
Abstracts FEBS'99
s103
(Su/10.1/046)
(Su/lO.1/o48)
s104
(Su/I0.II049)
Abstracts FEBS'99
(Su/10.1/050)
The enzyme UDP-GahGal~ 1,4GlcNAc-R c~l,3-gaIactosyltransferase (c3GAIT) transfers c~-galactose in a 1,3-linkage to the sugar chains of
glycoproteins and glycolipids. The resulting terminal element has the
structure Galc~I,3Gal-R. The enzyme c~3-GalT occurs in a variety of
mammalian species, but is absent in humans, apes, and Old World monkeys,
and therefore the latter species are unable to produce the Galccl,3Gal
disaecharide. This structure on endothelial cells is the major target for natural
xenoreactive antibodies during the hyperacute rejection of pig organs
transplanted to primates.
In the mouse, the gene encoding c~3-GalT is expressed in most tissues and
cell types, with the exception of male germ cells and hepatocytes. Expression
of ~x3-GalT is upregulated in murine F9 embryonal carcinoma cells treated
with retinoic acid. To investigate the regulation of c~3-GalT gene expression,
we have isolated several kb of upstream genomic sequence. Sequences
upstream of the transcriptional start site were able to drive the expression of a
luciferase reporter gene transfccted into F9 cells and COS cells. By deletion
analysis we have identified a minimal fragment able to mediate a 5-6-fold
stimulation of luciferasc gene transcription in F9 cells treated with retinoic
acid. In this fragment two putative transcription factor binding elements were
identified by data base search, one of which was bearing a weak resemblance
to a DR2 direct repeat of RAREs. EMSA analysis and site-directed
mutagenesls studies were employed to determine if any of the elements thus
identified were directly involved in retinoic acid stimulation of c~3-GalT
expression, and to investigate which factors might be involved.
Supported by Human Frontiers Science Program Grant RG 414-94 M, and
EC Biotechnology grant BIO4-CT97-2242.
References:
D.H. Jozlasseetal. (1989)J. Biol. Chem. 264, 14290-14297
D.H. Jozlasseetal (1992) J. Blol Chem. 267, 5534-5541
S.K. Cho et al (1996) J Biol Chem. 2"71,3238-3246
Abstracts FEBS'99
(Su/10.1/053)
s105
(Su/10.1/054)
(Su/10.1/055)
Ho~ever. the
mechanisms underl) nlg are still unknoxxn Tbe aim of the present studs ~as to examine the
role ofgangliosldes in the high-affintl3 DA uplakc m m( striatal s)naptosomes hlcubanon
of s)naptosomcs for 40 nun at 37C xxlth neurammidase of ['~brto ('holerae (NVch). an
el~3 me wluch spiltts off smhc acid from pob smloganghosldes. Ieaviog GM I intact, caused
a 40% loss of lipid-bound siahc acid and major modifications of ganghostdes pattern.
Hox~evcr. 11o modification of DA uplake was observed I1 suggested that earlchment of
s3naptic membranes in GMI is sufficient to roannam the efficacy of the DA uptake In the
seeood set of e\ponments we ins estigated the effects of exogenonsb added GM I After lh
of incubation at 37C ~ith 1.2 x 10"M. 1.2 x 10"M and 3 x 10+M of GMI. 0.023.
tl 214 and t) 804 mnol of GM 1 x~ere stabl3 assoctated to s) naptosomes, respoctwel). At
1 2 ", ltl "M. tins association modified the actwlt~ of the neuronal dopaoulle transporter
(TNDA). since a decrease m both Vnlax and Km (about "~5%)was observed, reflecting a
reduction of the ilnnlber of uptake sues and an increase of the affioit), respoctlxcl?, Wheo
s3naptosemes \sere incubated xuth a 100 fold lo~xer concentration (I.2 x 10~MI. the
reductmn of Vmax was Io~xer thao that observed ;~lth 1.2 x It)~'M GMI (17% xs 35%.
rcspoctlxel)) We postulated that a part of assoemted-GMI is anached to membrane
proteins, l~mtcularl) to TNDA and hindered DA binding to us transporter Oi the other
Itand. a souilar decrease of Kill was obtained at these me eoncenlratlons o[" GMI used.
These findings suggested that an e\tremcly Io~* but crmcal level of asseclated-GMI to
s) naptlc plasma membrane is able to influence the acti~it3. of TNDA
(Su/0.1/056)
:soouoaoJa~I
possros!p
osi~ axe sp!nll ~poq sno.I~A 1~. l d d Jo Sla^aI ~'ug.elvo~p se lla~ se 'sanssp Im,aj
pl/e l[npe tretunq I~tl.UOU]ll~Ja:~p ~ VNrh,lu sl! pu'e g[dd jo uo!ssa.ldx~
"e~u~'~Id aql ~ luoumo.2~AUOO.~.nU30uo!rzs.nreS.IOptre
~.uauadoI~p ~tll m uo!~u~ ~lq!s~od ~ OA~qOS~ ,~l~m ~ldd 'sanss[1 ~ saaro~ru:ls
8'~o'3-~,eapKqood'eo o~.~odsjo ~3u~.madde oql ql!m p~e!oosse ,~lle.~odmalpm~
polelnSaa ~ll~u~mdola^ap s! ~trea,~dde ~aql ptm suo!l,vreaa:~m,x]a.:~em-ll~O ptre llOO
-II~ m po^lOAm" axe supooIIe .tu~ ~d,Ca-S sV "sdnoa~ lO.n,ll a^!~waJ/'o~a3 osre pue
~uo~uco a~eap.,(qoqaw~e set/~,l "spuoq op~rts!p .4q aaqlaSo:~ pl~q slranqns e(p I 9I
l~!~ap! o.~,12o posodt~oo oq o:~pu'no3 ge~ Eldd s.~s'itw.r~aolq-~o:~SA~q :K.17,-tre3
m.13oI ~
ad.~.-S aql 3o so!~su~o~o aql Jo amos sassassod f I d d
',~Lgtre.,uadnst-q.~OOli-eta~ od1-S
~m.pmqap!sol.oel~- ~ po~asuoo Air, a/oquo ~aqtootu 'osed~/oqdsoqdos,q uogourt2
-l~np anb.ran e "taplo~d It,ls~ 3 uap,~oq-lcoxeqD l~ldoutsoo u~ttmq VO"4 ~'9I attl
o~. (%0L) sno~'olomoq ~Itf8.af s! 1dd '~ueqelep u!olo.~d aq:130 qoxeos 1uou.a@~
oq~, ,~t ~071 8[l'9[ 3o s ~ m xeln~lotu pow!paad e ql.t,, moload ~'UOl-onp!s~a
6gI ~ Jo3 sopooua attre,tj ~u!pwoJ uado aql leql pa~oqs VNUO aq130 s[S~leUe
aouonboS "mtuas Idd-,rltre o~!oadsouom qlt~^ ,~v.aq.q VN(/O l~luooeid ~ m n q
i~uruaaaos ,~q palelOS ! s ~ laasa! dq 84~ e qlL~a VN(IO ql~Ual llrt3 V
"([dd) gI t~.oad l'eluaoeld aql s! dno.~'
s.n4~3oaoqmam V '[~'~] ut'~al qaJ~aso~ .too q pouo[o uooq osl~ aAt~.tmoql30 OmOS
'[I] ~/ooq mOm. po~.ss~Io ptr~ paJoAeOs!puoaq o^eq sm.o~oadpaselOa-L~treu~aad
luo-to.t~!P 9ff am!1 s.atl oom.S -~tmtt~aJd jo aotmoo~,um,m aq~, ta Jo e~uoOeld
pu~ s~oj oqIJ.o luomdolaaa p a ~ tq a[o~ ltml.todttt~ tm etd o~,moos p ~ Lotrea~aad
8u~np s~unour~ pos~,o~m. ~ pos!saqgt~s ore smolo.td polelo~-gotmt~OXd
Xumaa~D 'UVVT/~anqxf4: 'DV ~'/J~UMZl~ft,
fao~unH 's~adfo lOOtp~ l t ~ z t ~ eO!~a~a~uD
'~fgOlO~rJurfD pur~s~!al~sqofo lu~u~avd~Gq ptro '~stuadttoo!~fo ~jnl!lSUl~
,%aurej.~ons~
~
m~.pm.q.,al~,~
n :! maloadimmoeld meumtlJOu ~
;all.lo a~lUQm
66,$8~Lq s13ealsqv
(Lff0/I'0I/ns)
90~ s
Abstracts FEBS'99
s107
(Su/13.1/059)
(Su/13.1/060)
Two isoforms of dopamine D2 receptor, D2L (long) and D2S (short), differ
by the insertion of 29 amino acids specific to D2L within the putative third
intracellular loop of the receptor, which appears to be important in the
selectivity for G-protein coupling. We have generated D2L- and D2Sexpressing Chinese hamster ovary (CHO) cells, and regulation of the
mitogen-activated protein kinase (MAPK) pathway was examined in these
ceils. D2L and D2S both mediated a rapid and transient activation of MAPK
with dominant activation of p42-kDa MAPK. Pcrtussis toxin treatment
completely abrogated the stimulation of MAPK mediated by D2L and D2S,
demonstrating that both receptors couple to pertussis toxin-sensitive G
proteins in this signaling. The stimulation of MAPK mediated by both D2L
and D2S receptor was markedly attenuated by coexpression of the Cterminus of 13-adrenergic receptor kinase ([3ARKct), which selectively
inhibits G[3"t-mediated signal transduction. Further analysis of D2L- and
D2S-mediated MAPK activation demonstrated that protein kinase C and
(Su/13.1/061)
s 108
(Su/13.1/062)
Abstracts F E B S ' 9 9
(Su/13.1/063)
Department of Molecular Bsology, Flanders lnstituw for Btotechnology Umverstty of Gent, K L Ledeganckstraat 35. 9000 Gent, Belgtum
(Su/13.1/064)
(Su/13.1/065)
Abstracts FEBS'99
(Su/13.1/066)
s109
(Su/13.1/067)
Striking progress has been recently made m the knowledge of the structure
and the function ofvasopressm (AVP) and oxytocm (OT) receptors [I]. "l-he
AVP Via receptor subtype is one of the first ncuropeptide r=.-c?!,~r for
',vhic]l a three-dm~ensional m o d e l o f interaction \~ lib !ty: rtaI.ura[ 13oi125o:!c has
(Su/13.1/069)
s 110
(Su/13.1/070)
Abstracts FEBS'99
It has been shown that ix2 ARs are localized to and function on the
basolateral surface in polarized renal epithelial cells; targeting to this surface
involves regions within the transmembrane domains, whereas the third
cytoplasmic (3i) loop is critical for surface retention of the receptors [1]. In
order to identify proteins that may contribute to this retention mechanism, in
vitro translated [35S]Met-labeled genl0 fusion proteins with the 3i loops of
the cx2A AR (V217-A377), ~2B AR (K210-W354) and ff.2C AR (R248V363) were used as ligands in gel overlay assays. The [35S]Met-3i loops of
the t2B and c2C ARs identify a protein doublet of -30 kDa in cytosolic
extracts derived from MDCK cells or pig brain cortex; the ct2A3i loop
interacts with the same proteins, but to a lesser extent and requiting a longer
incubation time. Purification of these proteins by sequential DEAE and size
exclusion chromatography revealed, via protein microsequencing, that they
are the ~ isoform of 14-3-3 proteins. These interactions are also obtained
with native ~2 AR subtypes assessed using a solid phase binding assay with
[35S]Met-14-3-3~ as a probe and solubilized x2 AR as the target. In
addition, interactions with native receptors are diminished if not eliminated in
structures where the 3i loop has been deleted. Attenuation of these
interactions in the presence ofa phosphorylated Raf-1 peptide corresponding
to the 14-3-3 binding domain (residues 251-266) but not by the nonphosphorylated peptide is evidence for the functional specificity of these
interactions. These studies provide the first evidence for G protein-coupled
receptor interactions with 14-3-3 proteins and may provide a mechanism by
which the receptors could be retained on the surface, differentially localized,
or enriched in multi-protein complexes to provide a higher order of specificity
in coupling to signal transduction pathways.
(Su/13.1/072)
(Su/13.1/073)
UMR CNRS 6548 Lab. Physio. ('ell. Molec., 06108 Nice, France
Abstracts FEBS'99
s 111
(Su/16.1/075)
C e n t r e d u M 6 d i c a m e n t U P R E S , F a c u l t y o f P h a r m a c y , U H P . N a n c y , France.
(Su/16.1/077)
s112
Abstracts FEBS'99
(Su/16.1/079)
(Sud16.1/080)
n~a~
ann a ~ - a a n ~ m ~ a e ~ a ~ r ~ e n z y m e s
(Su/16.1/081)
Angiotensin-converting enzyme (ACE, EC 3.4.15.1) is a Zn 2+peptidase, which possesses a wide specificity as it hydrolyses a range of
natural and synthetic peptides. Molecular cloning of the somatic form of
ACE demonstrated that the enzyme is composed of two homologous
domains referred to as N- and C-domains, each domain containing a
catalytic site [1]. Functioning of two domains is not yet properly understood
and it is still unclear whether they act independently in the whole ACE
molecule.
We used three bovine ACE isoforms - full-length pulmonary form,
testicular form (which represents C-domain of somatic ACE) and N-domain
which was obtained by limited proteolysis by trypsin of full-length enzyme to investigate how do domains function within full-leng~h isoform. We have
shown that the hydrolysis of several synthetic tripeptide substrates by all
three isoforms was characterised by different catalytic parameters. The
kinetic parameters, kcat and Km, of the hydrolysis of Hip-His-Leu and FaPhe-Gly-Gly by all three ACE forms were found to be very similar. We
didn't fred any significant difference in Michaelis constants values in the
reaction of hydrolysis of Cbz-Phe-His-Leu, Fa-Phe-AIa-Ala and Fa-PhePhe-Arg by two-domain and single-domain enzymes but kcat value appeared
to differ markedly. The value obtained for somatic form was mean quantity
of constants determined for single-domain enzymes. The analysis of
different kinetic schemes allowed us to demonstrate that N- and C-domains
in fulMength somatic enzyme are strongly dependent, that is binding of
substrate molecule on one of the active sites of ACE prohibits simultaneous
binding of another substrate molecule on another active site.
References:
[l] F. Soubrier, et al., Proc. Natl. Acad. Sci. USA, 85, (1988) 9386.
Abstracts FEBS'99
(Su/16.1/082)
s113
(Su/16.1/083)
"lnstitut J. Monod, Univ. Paris 6 & 7, 7"43, 2 place Jussieu 7.5251 Paris Cx
Inactive n ~ n m r - m h d ~ l l ~
~mp~x
Innl~tor
I I:::: I
anllparalkl [~-sh~t
1o~,
HO~FNLT
(Su/16.1/084)
(Su/16.1/085)
Mutageuesis study of residues involved in substratebinding in the chitosanase from Streptomyees sp. N174
R. Brzezinski, H. Tremblay
Biologie, U. de Sherbrooke, Sherbrooke (Quebec)J i g 2R1 Canada
GOttingen, Germany
s 114
(Su/16.1/086)
Abstracts FEBS'99
(Su/16.1/088)
(Su/16.1/087)
Even if CO2 transformation inevitably proceeds through the BensonCalvin cycle, in some angiosperms that are mostly found in dry and warm
regions (C4 plants), the first step of CO2 assimilation is performed by the
phosphoenol pyruvate carboxylase (PEPcase) enzyme. Here we describe a
purification procedure tbr this enzyme in the C4 sugarcane plant. Kinetic
study results are also presented.
SugarcanePEPcase has been extracted with a citrate-phosphate 100
mM buffer pH 6.8. Protein extract was precipitated with ammonium
sulphate (15-50%) and purification was performed through successive
chromatographic columns (ion exchange, hydroxyapatite and molecular
sieving columns). The ultimate purification coefficient topped to 38.3 and
final yield was approximately 3.2%. The specific activity of the enzyme
reached 268 nkat/mg. The molecular mass of the PEPcase, 398 kDa, has been
estimated by molecular sieving chromatography and by electrophoresis.
PEPcase activity was monitored using two methods: reaction
coupled with MDH and OAA production monitoring at 270 nm. Both
methods gave similar results. The kinectlc parameters (Kin. spec. act, %
activation by G-6-P) of our PEPcase were similar to those described in the
litterature. We also showed that inhibition by L-malate was of competitive
type. Similarly. we found that sugarcane PEPcase activity was optimal at
pH 8,2 and that zt decreases at Mg- concentratzon higher than 25 mM.
(Su/16.1/089)
Abstracts FEBS'99
(Su/16.1/090)
s115
In addition, a clone was constructed that encodes the C-terminal amino acids in
order to express this region separately for structural studies.
(Su/16.1/092)
(Su/16.1/093)
O
HN"JJ"NH
Biotin synthase
ONe'S3 (CH214COOH
HN~j..NH
s116
(Su/16.1/094)
Abstracts FEBS'99
(Su/16.1/095)
(Su/16.1/096)
(Su/16.1/097)
Abstracts FEBS'99
(Su/16.1/098)
s117
(Su/16.1/099)
(Su/16.1/100)
(Su/16.1/lO1)
s118
(Su/16.1/102)
Abstracts FEBS'99
(Su/16.1/103)
(Su/16.1/104)
(Su/16.1/105)
Abstracts FEBS'99
s119
(Su/16.1/107)
(Su/16.1/109)
s120
Abstracts FEBS'99
(Su/16.1/lll)
(Su/16.1/113)
Abstracts FEBS'99
(Su/16.1/l14)
(Su/16.11116)
s121
(Su/16.1/115)
Rn nuclease I isolated from rye germ nuclei has been characterised as a very
useful tool for secondary and tertiary structure investigation of RNAs.[ 1,2]
The main feature which makes this enzyme ideally suited to structural studies
is its ability to hydrolyse nucleic acids both in the presence and the absence of
divalent cations However using spectrophotometric assay we observed, that
the rate of RNA hydrolysis by Rn nuclease I was lowered by the presence of
divalent cations such as Mg-- Recently we have used yeast tRNA P~ and
yeast tRNA '~p to study the Mg -~ ions dependence ofRn nuclease 1 activity, it
is known from the crystallographic studies (1) that two magnesium ions are
bound to the anticodon stem and loop of the tRNA r'hc We have shown that
incrising Mg-" ions concentration inhibited Rn nuclease I cleavages observed
in the anticodon loop of tRNAVhL In contrast, the primary cleavages
introduced by Rn nuclease I to the anticodon loop of tRNA ~ were not
inhibited in the presence of magnesium ions. We conclude, that the inhibitory
effect of Mg'- ions on the RNA hydrolysis by Rn nuclease I is caused by the
change in the RNA structure rather than in the enzymatic protein molecule.
This also confirmes that Rn nuclease is a very sensitive structural probe.
[1] Przykorska A et al., Nucl. Acids Res ,20,(1992)659.
[2] Przykorska A eta[, Eur. J Biochem, 108,(1980)285.
[3 ] Westhof E, Sundaralingam M., Biochemistry 25, (1986)4868.
Supported by KBN Grant No 6 PO4A 063 10 and Polish-French
Biotechnology Centre.
(Su/16.1/117)
Clarified apple juice concentrate is one of the most consumed fruit juices in
the world. Problems in industrial clarification of apple juice are caused
mainly by the presence of pectic substances which remain as suspended
pulp particles. Commercial pectic enzymes (pectinases) are used in the
apple juice manufacturing to depectinize pressed juices in order to remove
turbidity and prevent cloud-forming [1]. Pectin lyase (PL, EC 4.2.2.10)
seems to be the only pectic enzyme capable to break down pectin with a
high degree of esterification into smaller molecules [2].
The objective of this work was to determine the activity and kinetic
properties of PL contained in four different commercial pectinases.
Rapidase C80 (Gist Brocades), Pectinex 3XL (Nova Nord:sk), Biopectinase
CCM (Biocon) and Grymdamyl 3PA (Grmdsted) In this sense, various
parameters, such as enzyme or substrate concentration and effect of pH
were studied.
All the preparations presented PL activity, exhibiting Rapidase C-80 the
highest activity levels. The kinetic constants of Michaelis (K,, and V,,~
values) were determined by measuring the enzymatic reaction rates at
different apple pectin concentrations (0.02-1%). PL activity did not follow
pure Michaelis-Menten kinetics in any of the enzyme preparation assayed.
The form of the graphs obtained was typical of enzymes exhibiting
substrate inhibition at high substrate concentrations. The determination of
apparent K,, and Vm~ constants was possible by using the linear portion of
the curve at low substrate concentrations [3], and the Km was calculated to
be 2 4; 34 3, 0.3 and 0.9%, whereas the Vm,, values were 19.0; 45 9, 3.4
and 10 9 U ml "~, respectively.
The pH-dependence of the pectinase activities was also tested. The optimun
pH was approximately 5.5 in the Rapidase C-80 assays and 6.0 in all the
other preparations.
[1] Ceci et al, Food Chem., 61, (1998) p. 237.
[2] Serra et al., Alimentacion, Equipos y Tecnologia, 8, (1992) p. 127
[3] Parr, Enzyme Microb. Technol, 5, (1983) p. 448
CoA'S.~..F'....f~CO
0
Plmeloyl-CoA
O" +
H NH3+
H3C*~COO"
L-Alanlne
H3C
Scheme I.
[1]
[2]
[3]
+ .......
02
8-Ammo-7-oxop61argonat
Ic
~_
H ,,NH3+
H~C'~"~/~CO0"
O
Intecmedlate [
COO
-1
J
S 12 2
Abstracts FEBS'99
(Su/16.1/119)
(Su/16.1/120)
Abstracts FEBS'99
(Su/16.1/122)
s123
(Su/16.1/123)
Rotation of a nucleotide out of the DNA helix (base flipping) has been
first observed for the Hhal methyltransferase followed by numerous
other DNA modification and repair enzymes. MHhal catalyzes
transfer of a methyl group from cofactor S-adenosyI-L-methionine
onto the C5 position of the first cytosine in the target sequence
GCGC. In this study, stopped-flow and rapid-quench techniques
were employed in combination with fluorescence detection for kinetic
characterization of individual steps on the reaction pathway of
MHhal. Selective labeling of the DNA substrate was achieved by
synthetic incorporation of 2-aminopurine at the target or neighboring
base positions. Association, dissociation and single-turnover
experimental setups permitted direct determination of kinetic
parameters for DNA binding, flipping of the target base,
conformational transitions in the protein, methyl group transfer and
release of methylated DNA. In conjunction with structural data, our
results suggest detailed catalytic mechanisms for DNA base flipping
and catalysis by DNA cytosine-5 methyltransferases.
(Su/16.1/124)
(Su/16.1/125)
s 124
Abstracts FEBS'99
(Su/16.1/126)
Lipases are one of the most important class of industrial enzymes, which are
used intensively in the biotransformation of fats and oils, in household
detergents, and especiallly in the synthesis of very important pharmaceuticals
and agrochemicals. Most of the industrial lipase enzymes have been
produced and stabilized from microbial resources. Although cereal grains and
oilseeds are cheap and alternative sources of lipases, they have not yet been
studied in this regard and they could be exploited for industrial or technical
purposes
Nigella sativa L. is a member of Ranunculaceae family and contains an active
lipase even in dormant seeds. In this study, the stabilization of Nigella sativa
lipase in the presence of polyethylene glycol (PEG) compounds was
investigated.
To see the effect of PEG compounds ( PEG 1000, PEG 6000 and PEG 8000)
on the thermostability of Nigella saliva lipase, PEG compounds at various
concentrations from 0.1 to 5 0 % (w/v) were added to the crude enzyme
solutions which are extracted from seeds by phosphate buffer (pH 7 2). After
heat treatment of enzyme solutions with or without PEG compounds at 30-60
C for 30 min, optimal concentrations of PEGs that provide the highest
thermostabilization of enzyme, were found to be 2 5, 1 3. and 1 0 % for PEG
1000, PEG 6000 and PEG 8000, respectively. The greatest enhancement of
thermostability was observed with PEG 6000, as a nearly 5-fold increase
above 50 ~JC The addition of PEGs did not cause any change in the optimal
temperature and pH value of free enzyme, but the parameters V,,~, K,~, the
activation energy were decreased in some extent because of the
uncompetitive inhibition by PEG compounds
(Su/16.1/128)
(Su/16.1/127)
lgG purified from sera of patients with autoimmune and viral diseases are
shown to present RNA hydrolyzing activities that are different from the weak
RNase A-type activities found in the sera of healthy donors. Further
investigation brings evidence for two intrinsic activities, one observed in low
salts conditions and another specifically stimulated by Mg 2 ions and
distinguishable from human sera RNases. Cleavage of RNA substrates by the
latter activity is not sequence-specific but sensitive to subtle conformational
and folding changes, as evidenced by comparative analysis of couples of
structurally well-studied RNA substrates. These include yeast tRNA Aspand its
in vitro transcript and human mitochondrial tRNALys-derived in vitro
transcripts. The discovery of catalytic antibodies with RNase activities is a
first step towards creation of a new generation of tools for the investigation of
RNA structure.
RNA cleaving molecules mimicking catalytic center of ribonuclease A were
synthesized. The compounds have imidazole residues, conjugated to cationic
structures with different number of charges. In experiments with human
mitochondrial tRNALyS-derived in vitro transcripts and yeast tRNA Phe it was
found that some of the artificial nucleases cleave RNA in physiological
conditions (37C, pH 7). displaying similar cleavage specificity with some
variations. Sensitivity of phosphodiester bonds to the compounds decreases in
the order: CA>UA>CG>CU, CC. Synthetic ribonucleases display strong
preference to the single-stranded RNA regions. The compounds provide new
probes for investigation of RNA structure in solution and potential reactive
groups for antisense oligonucleotide derivatives.
(Su/16.1/129)
gEI s
66,S ~tK_q s l a e a s q v
s126
Abstracts FEBS'99
(Su/2.1/132)
The mechanisms that control the fidelity of DNA replication are being
investigated by a number of approaches. Important tools in these studies are
mutant versions o f D N A polymerases that affect the fidelity of DNA
replication.
Replication ofEscherichia coli chromosome is performed by the DNA
polymerase 1II holoenzyme (Pol III HE). Pol III HE is asymmetric complex
containing a total of 18 subunits (10 distinct). It has been suggested that proper
interactions within the polymerase III holoenzyme could be essential for
maintaining the optimal fidelity of DNA replication. We have been particularly
interested in elucidating the physiological role o f t subunit (product ofdnaX
gene). The z subunit dimerizes DNA polymerase III via interaction with the ot
subunit, allowing DNA Pol lII HE to synthesize both leading and lagging
strand simultaneously at the DNA replication fork.
To gain insights into the functional and structural importance of proper
x - ot interaction in maintaining the high fidelity of replication we examined'
a/the ability of the ot protein to interact with two x mutant proteins (DnaX36,
DnaX2016) using yeast two-hybrid system,
b/the fidelity of synthesis of the leading and lagging DNA strands in E. coli
strains carrying mutant dnaX alleles.
Our results indicate that dnaX36 and dnaX2016 mutations result in an
altered strength of the ct subunit-x subunit interaction. E. coli strains carrying
either dnaX36 or dnaX2016 allele exhibit moderate mutator phenotype.
Our previous data [ 1] suggested that in the wild-type strain of the E.
coli the lagging-strand replication is more accurate than leading-strand
replication. The presence ofdnaX36 and dnaX2016 mutator alleles changes the
mutational strand bias between leading and lagging DNA strand. A possible
role of'c subunit in controlling fidelity of DNA replication will be discussed.
References:
[1] I. J. Fijal'kowska et al Proc. Natl. Acad Sci. USA Vol. 95, 1998, pp. 9718
(Su/2.1/133)
Most known archaeal DNA polymerases belong to the type B family, which
also includes the DNA replication polymerases of eukaryotes, but maintain
high fidelity at extreme conditions. We describe here the first crystal
structure of an archaeal DNA polymerase, at 2.5 A resolution, from the
hypertherophilic Archaea Thermococcus gorgonarius and identify structural
features of the fold and the active site that are likely responsible for its
thermostable function. Comparison with the mesophilic B type DNA
polymerase gp43 from the bacteriophage RB69 highlights thermophilic
adaptations, which include the presence of two disulfide bonds and an
enhanced electrostatic complementarity at the DNA-protein interface. In
contrast to gp43, several loops in the exonuclease and thumb domains are
more closely packed. This apparently blocks primer binding to the
exonuclease active site. A physiological role for this 'closed' conformation
is unknown but may represent a polymerase mode, in contrast to an editing
mode with an open exonuclease site. This archaeal B DNA polymerase
structure provides a starting point for structure-based design of polymerases
or ligands with applications in biotechnology and the development of
antiviral or anticancer agents.
References:
[1] Hopfner KP, et al, Proc. NatL Acad Sci. USA (1999), in press.
Abstracts FEBS'99
(Su/2.1/135)
s127
(Su/2.1/136)
Replication of Chromosomes
B. Stillman
Cold Spring Harbor Laboratory
Cold Spring Harbor, NY USA
s 128
(Su/7.1/139)
[3]
(Su/7.1/141) The jasmonate-induced 60 kDa protein of barley exhibits Nglycosidase activity in vivo
Marina Dunaeva, Cornelia Goebel, Eckart Goerschen
lnsntut fur Pflanzenbwchemle, Weinberg 3, D-06120 Halle/Saale, Germany
Abstracts FEBS'99
(Su/7.1/142)
s129
(Su/7.1/143)
[75Se]SeP, synthesized
from
(Su/7.1/144)
(Su/7.1/145)
s 130
(Su/7.1/146)
Abstracts FEBS'99
(Su/7.1/148)
(Su/7.1/147)
15
(Su/7.1/150)
s 131
(Su/7.1/152)
(Su/7,1/153)
s 132
Abstracts FEBS'99
(Su/10.2/156)
(Su/10.2/155)
........ ~,,.
........
-
(Su/10.2/157)
We have demonstrated that immature and mature rat Leydig cells, cultured
during 24 h, synthetize cell layer associated proteoglycans (PG) and in
particular heparan sulphate PG (HSPG) [1]. In immature animals, the PG
are more abundant than in mature rats (+20%) and among them, HSPG are
3 fold more concentrated in immature Leydig cells [1].
In order to characterize the involvement of proteoglycans in the regulation
of Leydig cell function, we have examined the effects of para-mtrophenyl~D-xyloside (PNPX), a specific inhibitor of PG synthesis and of paranitrophenyl-!8-D-galactoside (PNPG), an inefficient structural analogue, on
testosterone production by purified Leydig cells from immature and mature
rats, in presence or not of various concentrations of hCG during 24 h.
Whatever the age, addition of PNPX induces a decrease of [35S]- and [3HIlabelled PG associated with the cell layer. The latter are in lower amount (50 and -25%, in immature and mature, respectively) and are also less
sulphated (-40%). In immature Leydig cells, the PG inhibition decreases
basal and weakly stimulated-hCG or -oLH or -(Bu)2cAMP testosterone
syntheses. In mature Leydig cells, the PG inhibition has no effect on basal
(and weakly stimulated) testosterone production but increases it in presence
of subsaturating amounts of either hCG (or oLH) or (Bu)2cAMP.
Whatever the age, the PG inhibition has no effect in presence of saturating
amounts of hCG or (Bu)2cAMP. These effects are maintained in presence
of either an inhibitor of phosphodiestemse or an activator of protein kinase
C, but are not observed in presence of 22R-hydroxycholesterol. These
findings suggest that in rat Leydig cells, the PG inhibition affects the LH
stimulated testosterone output at a step distal to cyclic AMP and more
precisely, the cholesterol supply by acting on cellular cholesterol
distribution (free and esterified cholesterol) [2].
[1] Grudet N. et al., C.R,Acad. So. Paris, 319, (1996), 1101.
[2] Grudet N. et al, J. Steroid Biochem. Mol. Biol., 68, (1999), 3.
Abstracts FEBS'99
(Su/10.2/158)
s133
Yeast are single cell organisms but complexity of their structure and
t\mctions does not differ from higher eukariotes The ease of nutritional
and genetic manipulations makes S. ccrevl.~Ycw a very suitable system to
investigate gene and gene products required for lipid metabohsm In the
present paper we showed that disruption in t'ASl(peroxisome assembly)
gene lowers by 20% the total synthesis of dolichol Moreover. we proved
that oleic acid induced proliferation of yeast peroxisomes results in the
appearance #1 vivo and m vltlw of the additional family of longer (C,)~ - C
in0) than typical yeast dolichols Furthermore, we show that tile total
HMG-CoA reductase and FPP synthase activities are significantly
diminished m yeast cells deprived of functional peroxisomes We also
show that treatment of yeast cells with oleic acid increases the cellular
level of PC which is the main constituent of peroxisomal phospholipids
and may inf/uence the synthesis of longer dotichols On the basis of the
above results we suggest that yeast peroxisomes besides endoplasmic
reticulum participate in the synthesis ofdolichols
66, S ~12.q s l o g a s q v
~EI s
Abstracts FEBS' 99
s ] 35
MI~ANEPHf~PHOLIPIDASYM~ETRYINE-BETATHALASSEMIA
J. Basu and P.T. Srinivasan, Bose Institute,
Calcutta, India
The underlying
cause of the accelerated
destruction
of
erythrocytes
in the bone marrow and in the peripheral
circulation, accompanying the beta-thalassemic syndromes is
still not clearly understood. The transbilayer distribution of
phospholipids
in human beta-thalassemic
erythrocytes
also
remains to be explored in detail. We demonstrate that increased
phagocytosis of erythrocytes in E-beta-thalassemia is inhibited
by the presence of phosphatidylserine (PS) vesicles, suggesting
a PS-"BS receptor" type of interaction in premature recognition
of these erythrocyte s by macrophages. Increased exposure of
both aminophospholipids phosphatidylethanolamine
(PE) and PS
was demonstrated by fluorescamine labeling and annexin binding,
respectively. The slower rate of translocation of PS across the
bilayer suggested that this contributed towards the increased
exposure of PS in E-beta-thalassemic erythrocytes.
We also document differences in transmembrane distribution of
phosphatidylcholine (PC) between normal and E-beta-thalassemic
erythrocytes. Passive diffusion movements probably contribute
to alterations
in transmembrane distribution of PC. The
activity of the Ca-dependent phospholipid scramblase did not
differ between normal and thalassemic erythrocytes. The slower
rate of PS translocation and the enhanced passive movement of
PC into the inner leaflet of the lipid bilayer both contribute
towards a change in the transverse lipid architecture of
E-beta-thalassemic erythrocytes.
(Su/11.1/164)
s 136
Abstracts FEBS' 99
(Su/ll.l/168)
In humans, diets high in fish oil (containing omega-3 fatty acids) decrease
the incidence of coronary artery diseases. This is thought to be due to a
decrease in plasma triacylglycerol concentrations and possibly to an increase
in plasma high density lipoprotein (HDL) levels.
T o better understand the effects of omega-3 fatty acids on HDL
metabolism, we fed C57B1/6 female mice with an omega-3 fatty acidenriched diet and found that, although showing a decrease in plasma HDLcholesterol concentrations, they exhibited an increase in HDL-eholesteryl
ester removal from plasma via the liver.
(Su/11.1/169)
phosphatase.
The studies reported in this work represent the first &rect evidence of
protein-lipid redox interactmn: cytochrome b5 acts as an electron donor for a
redox system, m which lipid radical is an acceptor. The goal of this work was
to study lipid peroxldatlon ILPO) m liver mmrosomes (native and enriched
with tocopherol) The process of mlcrosomes ~solatmn was ran&fled to obtain
mierosomes with a low catalase activity. or microsomes depleted of cytochrome bs. Two various conditions of LPO activation in the membranes were
used: LPO was activated by either enzy.matlc (NADPH-dependent) or nonenzymatic (cumene-dependent) methods.
The result gwes rise to the suggestions: (a) LPO m the microsomal
membranes does not proceed by the chain reaction mecbamsm (the reaction
chain length is close to I ), (b) the inhibition of lipid peroxide production (the
antioxidant activ W of tocopheml) is implemented in membranes only under
the combined actmn oftocopherol and one of the member of the redox chain.
An external donor of electrons medmtes the reductmn of pernxyl
radicals and the production of anion peroxides (kO:" ---> LOT ); the latter
interacts with tocopherol. This may cause the recovery" of the lipid molecule
to the initial state as a result of one-electron oxidation of tocopheml and substitution o f Oz molecule (release of superoxide) for an H- atom (LH --> U---~
LO~ --* LO_;" ---> IM). Then. the NADPH- or NADH-dependent redox chain
~mplements specml types of interactions between tocopherol and LO/anion
m biological membranes. These interactions need the cytochmme b5 and they
are not accompanied by the tbrmatmn of LOOH as a terminal product. The
hpid hydropemxldes are not produced owing to lipid-radical cycles and hence
the lipid peroxidation in the functionally active biological membranes ~s
really blocked The lipid-radical cycles or. more precise, lipid pulsations are
probabl,, able to achvate the end member of monooxygenase system m the
microsomal membranes, cytocbrome P-450 and moreover to activate the
synthesis of proteins by membrane-associated ribosomes.
(Su/ll.1/170)
Abstracts FEBS'99
(Su/ll.1/171)
s137
(Su/ll.1/172)
(Su/11.1/173)
Unsaturated fatty acids are known to cause damaging effects on living cells.
Generally these effects are assumed to be triggered by the action of fatty acid
peroxidation products. However, results obtained with lens epithelial cells,
strongly support the notion that eis-linoleic acid (LA) itself injures the cells
without being oxidized [1]. On the other hand, free fatty acids are normally
taken up by organ cultured lenses and incorporated into triacyl-glycerides and
phospholipides of the lens cells [2].
The aim of this work was to find out to what extent LA influences the lipid
composition of cultured bLEC. We found that 75 % of the t~C-LA was
incorporated into phosphatidyl choline (PC), 8 to 10 % were found in
phosphatidyl ethanolamine (PE) and neutral lipids, respectively. After
converting PC into diaeyl-glyeerides by phosphollpase C treatment and
preparation of the corresponding dinitrobenzoyl derivatives [3] the reaction
products were analysed by HPLC. In cells which were cultivated in presence
of 10 I~mol/l LA the amount of dllinoleoyl-PC were doubled, while dioleoylPC remained equal.
Dllinoleoyl-PC is known to inhibit the acyl-CoA:eholesterol-acyltransferase
(ACAT, EC 2.3.1.26) resulting in increasing amounts of free cholesterol in
the cells [4]. Enhanced cellular concentrations of cholesterol are cytotoxic
and are also found during eataractogenesis and Niernann-Pick disease [5]. We
therefore suggest that the increase of cellular dllinoleoyl-PC might be one
reason for the especially high toxicity of cis-linoleic acid to lens epithelial
cells.
[1] D. Gl~er et al., Eur. J. Cell Biol., 71, (1996) 286
[2] B. Alhers-Jackson et aL, Curr. Eye Res. 2, (1982-83) 233
[3] M. Kito et al., J. Biochem., 98, (1985) 327
[4] S. N. Mathur et al., Biochim. Biophys. Aeta., 751, (1983) 401
[5] E. Cotlier et al., Biochim. Biophys. Acta, 530, (1978) 267
(Su/11.1/174)
s138
(Su/11.1/175)
Abstracts FEBS'99
(Su/11.1/175)
Patients with Zellweger syndrome and other disorders of peroxisome biogenesis have several abnormalities in lipid metabolism resulting in accumulation of very long chain fatty acids (VLCFA) and phytanic acid and depletion
in plasmalogens. Docosahexaenoic acid (DHA), an important polyunsaturated-fatty-acid of brain membrane phospholipids and photoreceptor
cells, was shown to be decreased in several tissues of Zellweger patients.
Martinez et al. [ 1] supplemented these patients with DHA which resulted in
reduced hypotonicity and improved visual functions
Using our mouse model for the Zellweger syndrome, recently generated by
inactivation of the PEX5 gene [2], the following questions were asked: 1) do
newborn PEX5 ' pups have a low DHA content in their tissues; 2) can these
pups be supplemented with DHA by feeding it to the mother; 3) does this
result in clinical improvement of the newborn Zellweger mice?
Total lipid extracts of mouse tissues were separated on amino-columns. The
phospholipid fraction was transmethylated and the fatty acid methyl esters
were analysed by GC on a BPX70 column.
The DHA level in brain phospholipids of newborn Zellweger mice was 50%
reduced as compared to normal littermates. Ten mg DHA-ethylester was
administered daily to pregnant heterozygous mothers CPEX5+~') by tube
feeding from embryonic day 10 (El0) till day E~s5 or birth. The DHA level in
Zellweger mice brains normalized to the level of control animals (born from
non supplemented mothers) and was elevated in normal newborn mice. However, in PEX5 -~- pups supplemented with DHA, no clinical improvement
could be observed. Their brains will be analysed to examine whether the neuronal migration defect, that is typical for Zellweger patients and also for the
PEX5 -/- mice, is affected by the DHA supplementation.
These data suggest that DHA therapy of pregnant mothers carrying Zellweger mice, does not correct clinical abnormalities in newborn PEX5 ~ mice.
[1] Martinez M. et al., Neurology, 43, (1993), 1389.
[2] Baes M. et al, Nature Genetics, 17, (1997), 49.
Supported Biomed BMH4 - CT98 - 3569
(Su/11.1/176)
(Su/ll.l/177)
The neoplastic cell has long been considered a passive target for an
antitumor drug. A simple example is the axiom (which disregards the
complexity of an eukaryotic cell plasma membrane) that molecules enter a
cell through Fickian diffusion.
Using the chemotherapeutic drug daunorubicin, we studied the
interaction between drug and a model monolayer membrane. We used
alternative current polarography, which has the specificity to allow for the
detection of the interracial process of water soluble molecule penetration
within a membrane [1]. The validity of this approach was previously
demonstrated on <<prothrombinase >~, membrane complex in coagulation
cascade. Indeed, consistent results were obtained, by complementary
methods, between monolayers, vesicles and platetets, either on structural [2]
or on functional point of view.
In a pharmacologically relevant concentration range, dannorubicin
presents different binding states, and more specifically distinct adsorption and
penetration steps. The threshold value separating these two events depends
on the lipid composition and most notably it decreases when sphingomyelin
content increases.
Abstracts FEBS'99
(Su/11.1/179)
s139
(Su/ll.l/180)
PARAMETERS
MDA (_n~..gHB)
G-px (Uml RBC)
CAT (K/s)
GR (U/mlRBC)
SOD (U/ml Blood)
(Su/ll.l/181)
DONORS
~4.17 5:9.05
4.24 :t0.62
3.006 5:0.0018
3.657 5:0.07
134.33+_10.35
PATIENTS
114.52:t:20.26
2.88 + 0.34
0.0045"5:0.00072
0.63 5:0.045
113.55+_9.94
(Su/11.1/182)
s 140
Abstracts F E B S ' 9 9
(Su/ll.l/184)
(Su/11.1/186)
Abstracts FEBS'99
(Su/11.1/187)
s141
IPMC, CNRS, 660 route des Lucioles, 06560 Sophla Anttpolis,, France
Secreted phospholipases A2 (sPLA2s) form a class of structurallyrelated enzymes that are involved in a variety of physiological and
pathological effects including inflammation and associated diseases, cell
proliferation, cell adhesion, and cancer, and are now known to bind to
specific membrane receptors. Here, we report the cloning and expression of
a novel sPLA2 isolated from mouse thymus. Based on its structural
properties, this sPLA2 is most similar to group I1A sPLA2 and has been
called mouse group llA-2 sPLA2 (mGIIA-2). As for the previously cloned
mouse group IIA sPLA2 (mGIIA-1), mGIIA-2 sPLA2 is made up of 125
amino acids with 14 cysteines, is basic (pI = 8.71) and its gene has been
mapped to mouse chromosome 4. However, mGIIA-2 sPLA2 has only 48%
sequence identity with mGIIA-I, indicating that the two enzymes are not
close isoforms. In further contrast with rnGIIA-1 which is found mainly in
intestine, transcripts coding for rnGIIA-2 sPLA2 are found in several tissues
including pancreas, spleen, thymus, skin, lung and ovary, suggesting distinct
functions for these enzymes. Recombinant expression of mGIIA-2 sPLA2 in
E. coli indicates that the cloned sPLA2 is an active enzyme that has much
lower specific activity than mGIIA-1 and displays a distinct specificity for
binding to various phospholipid vesicles. Finally, recombinant mGIIA-2
sPLA2 did not bind to the mouse M-type sPLA2 receptor, while mGIIA-1
was previously found to bind to this receptor with high affinity.
s142
Abstracts FEBS'99
(Su/13.21191)
(Su/13.2/190)
(Su/13.2/192)
Abstracts FEBS'99
(Su/13.2/193)
s143
(Su/13.2/194)
eonidia and
(Su/13.2/196)
s 144
(Su/13.2/197)
Abstracts FEBS'99
(Su/13.2/199)
(Su/13.2/198)
Prolactinsynthesisin humansalivaryglandsfrompatientswith
Sjilgren'ssyndrome
S. Steinfelda, Ch. Francoisb, S. Rommesb, D. Hoyauxb, R. K~ssb, R Pochetb
~Service de Rhumatologie, Hopital Erasme ,
hLaboratoire d'Histologie, Facult~ de M~decine U.L.B.. 1070
Brussels, Belgium
Abstracts FEBS'99
s145
(Su/16.2/201)
(Su/16.2/202)
(Su/16.2/203)
The role of the HELLGH (450-455) motif m the sequence of rat d~peptidyl
pept~dase ill (EC 3 4 14 4) was investigated by replacing Glu with Ala and
His with Tyr by site-directed mutagenesis
The cDNA were expressed in
Escherichia colt, and the resulting recombinant proteins named H450Y,
E451A and H455Y were purified to apparent homogeneity
Non~ of the
expressed mutated proteins showed peptldase actwity
Howevt~r, the
E451A contained one tool of zinc per tool of protein, and the H450Y and
H455Y, did not contain significant amounts of zinc, as determined by
atomic absorpUon spectrometry
These results prowde evidence that the
two histxdines in the HELLGH motif are zinc binding resadues and the
glutamtc acxd is essential for the en~me activity
The Leu453-deleted mutant which are same as "zmcin" motif conserved
among the M1 famxly of metallopeptidases had almost the same order of
binding affimty (for Arg-Arg-2-naphtylam~de) as the wild-type enzyme,
but the specificity constant was at about l0 %
By a search of the NBRFPlR protein sequence data base. three kinds of monooxygenases (tyrosine.
phenylalanine, and tryptophan hydrooxylases) had m common the
HExxGH motif, whmh was nearly the same as that m rat DPP II1
(HELLGH) In the case of HELLGH motif m phenylalanine hydrox2lase,
two histidine resxdues and a remote glutamtc aod (His285. His 290 and
Glu330) were identified as iron-binding hgands to the acnve-site aron by the
s~te-d~rected mutagenesls and X-ray crystallography
The actxve site
res,dues known by crystallographic analysis in thermolysme (HExxH)
superimposed onto these m tyrosme hydrooxylase (HExxxH)
In spne of
the changing of the motffofthe zinc binding site IHExxtf) to that of the ~ron
binding site (HExxxI-t), the arrangements of the residues m both acnve sites
were ver~ s~mdar Therefore, the tertiary structure of the HELLGH motif
m DPP Ill may be similar to that of the "zmcm" mot:f
s 146
(Su/16.2/204)
Abstracts FEBS'99
(Su/16.2/206)
(Su/16.2/205)
Abstracts FEBS'99
s147
(Su/oth/209)
Introduction
With a diagnostic level of 50%, benign prostatic hyperplasia (BPH) is
probably the most common affliction among men beyond 60 years of age.
Although cAMP is an established inhibitor of proliferation regarding both
airway- and vascular smooth muscle cells (smc's) only a few studies of
cAMP in cultured BPH smc's have been published. This investigation
mainly consider the effects of cAMP/cGMP on cultured BPH smc
proliferation.
Materials and methods
Prostatic tissue was obtained from transuretheral resection for BPH The
tissue was minced into lmm 3 explants and incubated in DMEM (5% FCS)
in 1130mm dishes. Before the beginning of an experiment the cells were
placed in serum-free medium for 24h. Proliferation was measured with or
without drugs using [3H]-thymidine incorporation during 24h incubation.
Results
The cAMP/cGMP levels were controlled by adenylyl cyclase (AC)
stimulation with forskolin and/or phosphodiesterase (PDE) inhibition with
IBMX or Zaprinast. Both Forskolin and IBMX produced by them self
significant inhibitory effects on the proliferation. However there was a
stronger effect when combining the drugs. When incubating cells with
Zaprinast, a selective PDE V inhibitor used to increase the cGMP level, an
inhibitory effect on [3H]-thymidine incorporation was received. Preliminary
results also suggest that there is a synergistic antiproliferative effect when
increasing both cAMP and cGMP levels.
Conclusion
Although Cq-adrenergic antagonists are known inhibitors of BPH growth, so
far there is no successful pharmacological treatment replacing transuretheral
resection. Our results show that pharmacological tools as PDE inhibitors
which increase cAMP/cGMP levels inhibit BPH smc proliferation, These
findings could offer a new pharmacological target to treat this affliction
among aging men.
(Su/oth/208)
s148
Abstracts FEBS'99
A Short term evaluation of 6 months oestrogen theraphy in 38 postmenopausal women was conducted The level of serum lipid
peroxidation and the status ofglutathione (GSH) and glutathionerelated enzymes were evaluated before and after 6 months oestrogen
treatment
At 6 months evaluation, oestrogen treated post-menopausal women
showed a significantly increased concentration ofmalondialdehyde
(p<0 025), an end product of lipid peroxidation and remarkably
increased levels ofGlutathione peroxidase (GSH-PX) (p<0 025) but
glutathione reductase (GSSG-R) activity was low (p<0.025), despite
the plasma GSH levels were not different
The levels of a lipid peroxide and glutathione-related enzymes in
blood are probably influenced by oestrogen action
(Su/oth/213)
(10, 100 tag/ml) on cell proliferation (cell counts) and TGF-ct, -131 and -132
mRNA expression (RT-PCR) was examined after 3 and 9 days of culture. The
IEC18 cell line was analyzed in basal conditions or after TNFct addition (1
ng/ml stimulates and 100 ng/ml inhibits IECI8 proliferation). In experiments
with PTX, intracellular cAMP was measured (ELISA).
Results: After 3 days of culture, PTX and DBcAMP inhibited in a dose-
(1) Ezenfis J. Application therapeutique d'un module experimental d'inflammation du tube digestif chez le rat. Effet sur les cytokines. DEA. ULP de
Strasbourg 1996
(Su/oth/214)
Abstracts FEBS'99
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s149
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(Su/oth/218)
s 150
(Su/oth/219)
Abstracts FEBS'99
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(Su/oth/221)
(Su/oth/222)
Abstracts FEBS' 99
(Su/oth/223)
Oxygen free radicals play a major role in the pathogenesis of postischemic injury
in the heart Antioxidative defense mechanisms ( i e nonenzymatic and
enzymatic) protect cells from the harmful effects of reactive oxygen metabolites
[1] The enzymatic antioxidant system has been proposed by our experiment as a
possible mechanism employed by vitamins in the protection of the ischemic
myocardium Wistar rats (males and females) were treated with isoproterenol
associated or not with vitamins A, E, or C. The hearts were isolated and
ventricular tissue was homogenized and assayed for enzymatic activity of
catalase, glutathione S-transferase (GST), glutathione reductase (GRID) and 7glutamil transferase (;~-GT) Lipid peroxide content (LPC) was determined by
quantifying the thiobarbituric acid reactive substances Vitamins did not
significantly reduced the level of hypertrophy induced by Is on myocardium,
which was generally higher in females than in males The activity of catalase was
intensified both in males and females treated with Is, while of GRD was elevated
in female groups, GST and y-GT were depressed in males Vitamins A and E
restored the control level of catalase, 3,-GT and GST in male groups, while
vitamin C had the same effect on catalase The following situation was observed
in female groups. (i) vitamin A enhanced the activity of catalase and 7-GT,
normalized GRD, and depressed GST, (ii) vitamin E elevated the activity of 7GT, and normalized the ones of GST and GRD, (c) vitamin C induced an
increase of ,v-GT activity, decreased the activity of catalase and GST, and
brought to control level the one of GRD The LPC of myocardium was
increased by ls only in females, and depressed by treatment with vitamins
Therefore. the biochemical feature of myocardial hypertrophy was gender
specific, meaning that antioxidant enzymes had a higher activity in females
probably as a consequence of the increased LPC Our results suggest that
catalase should be an auxiliary antioxidant mechanism of vitamin A in females'
myocardium, imposed by the oxidative stress Our experiment seems to highlight
7-GT as a constituent of antloxidant vitamins" pathway of action
[I] J T Flahert3. Am J Med. 91 (sup# 3C), (1991). 79S
(Su/oth/225)
s 151
(Su/oth/224)
(Su/oth/226)
The intensive use of antifungal agents, especially the azole class, has led to
the development of resistance in a number of fungi like grape powdery
mildew[l]. The mechanisms of resistance in field populations of DMIresistant fungi have been difficult to ascertain especially in the obligate
powdery mildew parasites. Currently there are no satisfactory explanations of
the resistance mecanisms to DMI fungicides in tolerant field isolates.
In triadimenol resistant field isolates, we showed that a high resistance level
to triadimenol was correlated to a single point mutation in the CYP51 gene
[2]. However DMI resistance seems to be polygenically governed in many
fungi, including U n c i n u l a n e c a t o r [3].
To understand which other resistance mechanims could be involved, we
crossed triadimenol-sensitive and resistant strains of grape powdery mildew.
The characterisation of progeny displayed five major phenotypes. One was
resistant to four DMIs (triadimenol, triadimefon, cyproconazole and
fenarimol), but its CYP51 gene was a sensitive gene without any resistant
mutation. In this case we expect an energy-dependent efflux resistance
system, Other resistant isolates, displaying single mutation at codon 136 in
~he CYP51 gone, showed an abnormal sterol distribution in mycelium and
conidia without fungicide treatment. Analysis of the sterol composition of
azole-resistant powdery mildew has provided several hypotheses on specific
alterations of enzyme and/or regulation involved in the complex sterol
biosynthesic pathway.
Our results show that there are multiple mechanisms of DMI resistance in
field isolates. We suggest that near the major point mutations in the CYP51
gene, other genes are involved in the regulation of sterol biosynthesis and
DMI
resistance and together may
control several resistance
mechanisms.Unserstanding resistance mechanisms is of value not only for the
design of new antifungal agents but also the developement of strategies of
overcome or delay the emergence of resistance.
[1] Adams D.J, I997, [n : Mo|ecular genetics of drug resistance, eds Hayes JH, WolfC R.,
Harwood Acad Publ. Netherlands.pp30-80.
[2] Delye Cet al., 1997, Appl. Environ. Microbiol.,63 : 2966-2970.
[3] Cono-Costet MF etal, 1998, 4t~ Int. Syrup. On P4~0Biodlversztyand Bmtechnology,
(July 14-16, Strasbourg, France).
s152
(Su/oth/227)
Abstracts FEBS'99
(Su/oth/229)
(Su/oth/230)
biliary lineage
D. Couchie, M.N. Chobert and Y. Laperche
INSERM U99, HOpital Henri Mender. 94010 Crdtei/. France
[1] J.W. Grisham et al., Prec. Soc. Exp. Biol. Med., 204, (1993) 270.
[2] M.J. Hooth et al., Am. J. Pathol., 153, (1999) 1913.
Abstracts FEBS'99
(Su/oth/231)
The present study investigated the ability of human osteesarcoma cells : MG63 and SaOS2 (different differentiation states) to produce enzymes involved in
bone resorption (cystein-proteases and metaUoproteases) and their regulation
by interleukin-ll3 (hlL-11~), intedeukin 6 (hlL-6), insulin growth factor-1
(hlGF-1), oncostatin M (hOSM), leukemia inhibitory factor (hLIF) and
growth hormone (hGH). Osteosarcoma cells in culture released enzyme
activities. Cathepsin activity was detected using a fluorescent synthetic
substrate, 7-N benzyloxycarbonyI-L-phenyl-L-arginylamide-4methylcoumarin
and its specificity was checked with E-64, a specific inhibitor of cysteinprotease
and
by
7-N
benzyloxyearbonyl-L-phenylalanyl-L-tyrosyl(lertiobutyrate)-diazomtthylcttone, a specific and irreversible inhibitor of
cathepsin L. The metalloprotease activities were determited by a zymography
technique and a immunochemistry method. No collagenase activity was
underlined in SaOS2 cell culture The cystein-protease activities of both cell
lines especially cathepsin L activity were increased significantly in presence
ofhlL-l[3, hIL-6 and hOSM. The collagenolytic activities in MG-63 cells were
upmodulated by the same cytokines excepted by hOSM In contrast hIGF-1
and hGH decreased the type I collagenolytic activities and no effect was
detectable in presence of hLIF. In conclusion, the present paper show that in
increasing collagen type I degradation, hlL-ll3, hIL-6 and hOSM could be
involved in bone resorption. Whereas inhibiting action of hIGF-I and hGH on
collagen type I degradation could imply this factor in bone formation.
s153
(Su/oth/233)
(Su]ofll]234)
H202.
s 154
((Su/oth/236)
(Su/oth/237)
(Su/oth/238)
Renal Cell Carcinoma (RCC) accounts for more than 90% of adult kidney
cancer and is the eleventh frequent cancers. RCC are mainly unilateral and
sporadic but can also be bilateral or associated with the yon HippeI-Lindau
disease (VHL).
The VHL gene, involved both in VHL disease and sporadic RCC, has
been cloned in 1993. It is a tumor suppressor gene localised on 3p25-26.
To investigate the nature of somatic VHL mutations, we analyzed 173
primary sporadic human renal cell carcinoma for this gene using single s~'and
conformational polymorphism analysis and sequencing. We detoct~ abnormal
SSCP patterns in 73 samples corresponding to microdeletinns in 58% of cases,
microinsertions in 17%, nonsense mutations in 8% and missense mutations in
17% of cases.
In addition to these results, we used data from the VHL database to
compare somatic and germline mutations. The study of mutational events
revealed a significant difference between somatic and germline mutations with
mutations leading to truncated proteins observed in 78% of somatic mutations vs
only 37% in germline mutations (p<0,001). We postulated that a specific pattern
of VHL mutations is associated with sporadic RCC. This pattern corresponds to
mutations leading mainly to Uxmcated proteins with few specific missense
mutations. We observed RCC in at least one member of the VHL families in
77% of cases with mutations leading to mmcated proteins vs 55% in cases with
missense mutations (p<0,05). Thus, mutations resulting in truncated proteins
may provide a higher risk to develop RCC for VHL patients.
Moreover, missense somatic mutations correspond to transversion in 68%
of cases and to transition in 32% vs 65% of transition and 35% of transversion in
germline mutations (p<0,001). Since transversions implicate a toxic factor, these
data support the hypothesis of the involvement of environmental factors in the
etiology of sporadic RCC in industrial countries.
Abstracts FEBS'99
(Su/oth/239)
s155
(Su/oth/240)
light niches
L. Garczarek ~, W. Hess ~ and F. Partensky ~
IObservatoire Oc~anologlque de Roscoff, CNRS et UniversiM Paris
6, Station Biologique, BP 74, F-29682 Roscoff cedex, France
2Humboldt- Universitat Berhn, Institut .fur Biologie/Genetik,
Chausseestrasse l 17, D- 10115 Berlin, Germany
Prochlorococcus is a marine photosynthetic
prokaryote possessing
divinyl derivatives of chlorophylls (DV-Chls) a and b as the major light
harvesting pigments [1]. As the other two known prochloropbytes,
Prochloron and Prochlorothrix, this organism has been shown to possess
a new kind of antenna proteins (so-called Pcb's) [2]. These proteins seem
to have evolved by gene duplication and divergence of the core Chl abinding antenna family, also including CP43, CP47 and IsiA [3], Variations
in the apoprotein composition of this light-harvesting system could be
responsible for the remarkable capacity of adaptation of natural
populations of Prochlorococcus, which can grow from the light-saturated
surface waters down to poorly illuminated deep waters (150 m or more).
Using southern blots, we have shown that the SS120 strain, isolated from
the bottom of the euphoric zone, possesses 7 different pcb gene copies,
whereas only one pcb copy has been identified in the MED4 strain,
originating from the surface waters. Moreover, an RFLP analysis of two
other Prochlorococcus strains (one low- and one high-light adapted) also
indicated a large difference in the number of pcb gene copies. To our
knowledge, those results constitute the clearest example of the effect of
light on the evolution of light-harvesting systems within a single genus.
[1] Partensky F. et al., Microbiol. Mol, Biol. Rev., vol 63, (1999) p. 106.
[2] Laroche et al., Proc. Natl. Acad. Sci., vo193, (1996) p. 15244.
[3] van der Staay et al., Plant Mot. Biol., vol 36, (1998) p. 709.
(Su/oth/241)
Effect of 6-bromo-6-deoxy-t~ascorbic
acid on
cisplatin-induced toxicity in mice
M Gavellah V. Sverko", M Rada&d". I Ljubenkov ~,
M Eckert-Maksic'. ~R 13o.~,'1,ovlchr./mite. Zagreh, I'll )'hovac
hl~tmae.Zagreb, Croatia. ' f l I O V I / l l ( Ka.Qe/-,S~tgttroc, ('/.oolla
(SIi/oth]242)
s 156
Abstracts FEBS'99
"
:DepartmentofMedicalBtochemistry,
University of TromsO, Norway.
(Su/oth/245)
(Su/oth/246)
The 52-rain region of the scherichia coli genome contains the xapABR operon
revolved m the metabolism of purine nucleosides. The xapR gene, which is
constitutwely transcribed, encodes a LysR family type regulatory protein.
W~en xanthosme is present XapR promotes transcription of xapA and xapB.
The xapA encoded product, xanthosine phosphorylase, can degrade all purine
nucleosides and the deoxy derivatives except (deoxy-) adenosine, but only
xanthosme can act as inducer. This salvage enzyme makes E. coli capable of
using xanthosine as a carbon and energy source.
Previously it has been suggested that together with xanthosme phosphorylase a
new uptake system was induced[l]. When the operon was sequenced in 1995,
it became clear that this property at least ha part could be assigned to the
presumed product of the xapB gene[2]. Supporting the role of xapB as a
nucleoside transporter, XapB was found to be enriched in the membrane
fraction in mmlcells. The hydropathic profile of the protein indicates that it is a
membrane protein with 12 transmembrane segments (12TM). This is m
contrast to identified nucleoside transporters from all other organisms,
Typically these are 9 or 14TM's. In this work we present strong evidence that
the protein indeed is a 12 TM nucleoside transporter. The ability of XapB to
transport nucleos~des is compared to that of the two well-characterised
transporters NupC and NupG. A yet tmcbaracterised ORF from the K coli
genome project is homologous XapB and NupG. Thus E. coli seems to have
three unusual 12 TM nucleoside transporters defining their own class in the
NHS superfamily.
i. K. Hammer-Jespersen et al., MoLGen.Genet. 179, (1980) 341-348
2. C. Seeger et al., ABactertol 177, (1995) 5506-5516
Abstracts F E B S ' 9 9
(Su/oth/247) Selective
expression
of
rat
7-glntamyl
transpeptidase promoters 4 and 5 in biliary and
immature hepatic ceils. N.Holic, T.Suzuki, I.Lamy,
s 157
(Stl/oth/248)
Patients with peroxisome biogenesis disorders, including Zellweger syndrome, present with several organ defects (brain, kidney) that are already
present during embryonic development. In order to understand the pathogenesis of these disorders, it would be of interest to document the appearance of the different peroxisomal pathways during development (p-oxidation,
o~-oxidation, etherphospholipid synthesis and isoprenoid synthesis). However,
the current assays do not allow a reliable measurement of enzyme activities in
foetal rat or mouse tissues. Detection of the proteins is also hampered by the
lack of sensitive antisera. Therefore, the ontogeny of peroxisomal enzymes in
different mouse tissues was evaluated at the mRNA level by Northern analysis. Northern blots contained total RNA isolated from total embryos at day
9.5 post conception (E9.5), from liver and brain of Ell.5, E14.5 and E18.5
embryos, and from mice aged 1 day, 1 week, 3 weeks and 6 weeks.
In a first stage the enzymes of the different [3-oxidation pathways were examined. The mRNAs encoding the 3 peroxisomal oxidases were differentially
expressed in liver and brain, before birth palmitoyl-CoA oxidase was more
abundant in brain than in liver whereas postnatally liver was more enriched,
pristanoyl-CoA oxidase was ubiquitously expressed but at very low levels;
trihydroxycoprostanoyl-CoA-oxidase was selectively expressed in liver from
E 14.5 on. Transcripts for the L-specific multifunctional protein (MFP-1), believed to play a role in the oxidation of straight chain fatty acids [I], were
abundantly present in postnatal liver but only at very low levels in prenatal
liver, and were absent in brain at all stages. On the contrary, the transcripts
for the D-specific multifunctional protein (MFP-2), involved in the oxidation
of 2-methyl branched chain fatty acids and bile acid intermediates [1], were
present throughout development not only in liver but also in brain. This study
will be completed by analysing thiolase and SCP-X mRNA expression.
The early expression of mRNAs encoding palmitoyl-CoA oxidase and MFP-2
in liver and brain might indicate that peroxisomal !3-oxidation of certain substratcs is important for embryonic development.
[1] Dieuaidc-Noubhani M. ctal., Biochem J., 325, (1997) 367.
(Su/oth/249)
(Su/oth/250)
s 158
Abstracts FEBS'99
(Su/oth/251)
((Su/oth/252)
(Su/oth/253)
Characterizationof Nuclear
Selenium-containingProteins of the Rat
A. Kyriakopoulo~,D. R~thlein, S. Kappler, D. Behnc
(Su/oth/254)
Abstracts FEBS'99
(Su/oth/255)
s159
(Su/oth/256)
(Su/oth/257)
(Su/oth/258)
s160
Abstracts FEBS'99
((Su/oth/260)
. The mechanisms leading to tacrine (THA) hepatotoxic effects arc not ye!
fully understood. Reactive oxygen species (ROS) overproduction and
intracellular reduced glutathione /GSH) depletion are common mechanisms
involved in drug toxicity.
, The aim of this study was to investigate, on the human liver cell line
HepG2, whether THA at human blood concentrations mduces ROS
production stimulation and/or GSH depletion. A possible effect of a free
radical scavenger, anethole dithiolethione (ADT), was also assessed.
, ROS production was measured with a fluorogen probe 2',7'dichlorofluorescin diacetate (DCFH-DA). Reduced GSH and cell viability
were measured with, respectively, monochlorobimane (mBCI) and neutral
red probes. Assays were performed directly on living adherent cells in 96well microplates,(MiFALC test-Micrototration Fluorimetric Assays on Ltve
cells)[1] and sensitive fluorescent detection used microplate cytofluorimetry
with cold light fluorimetry technology.
,The results showed that THA induced a concentration-dependent increase
in ROS production and a decrease in GSH [2]. Furthermore, for THA
concentratruns between 10 and 100 lxM~ ADT protected cells from ROS
production stimulation and GSH depletion induced by THA.
, In conclusion, These MiFALC tests is adapted to reactive oxygen
species and glutathione assessment, directly in live adherent cells in
microplates. So our in vitro study demonstrates that oxidative stress,
evidenced by enhanced ROS production and GSH depletion, is a mechanism
involved in THA cytotoxicity. Moreover, ADT is effective in preventing
THA-induced mnjury,
I l l - R a t P. et a l , Animal Alternatives, Welfare & Ethics. Elsewer, DAVS 27,(I 997) 813
[ 2 ] - R Ossenl et al.. Toxicok in Vitro, 1_33,(1999), in press
(Su/oth/261)
IN'rF_JtYACL~L
PROPERTIESOF
H A Z E L N U T OIL AND EMULSIFIER BLENDS
(Su/oth/262)
Abstracts FEBS'99
(Su/oth/263)
s161
calcium
Reference
(Su/oth/265)
(Su/oth/266)
s 162
Abstracts FEBS'99
((Su/oth/268)
The transport of nuclear proteins from the cytoplasm into the nucleus is
denpending on a nuclear location sequence (NLS) The protein import
without the help of cytoplasmic factors is a two-step process involving NLSdependent docking of the substrate at the nuclear envelope followed by
translocation through the membrane. In order to mimick the attachement to
the nuclear pore complex we synthesized nuclear location sequence
combined with Ferritin and a carboxyterminal His-tag Import of NLScontaining proteins was inhibited by these compounds The NLS was
derivated with an azido-group The transport inhibitor (Ferritin) may be
removed by reducing agents The irradiation of the sensitized membrane
permitted the specific labeling of two proteins. The covatently marked NLSbinding proteins of the nuclear pore complex can be extracted from nuclear
envelopes and isolated by metal affinity chromatography The apparent
molecular weight of the most dominant protein band was determined to 65
kD.
Microscopic studies on
crystals of insulin mutated at crystal contact surfaces.
U. Schell & R. Hilgenfeld
Institute of Molecular Btotechnolog3; Department of Structural Btology &
Crystallography, Beutenbergstr 1 I. 07745 Jena, Germany.
(Su/oth/270)
Abstracts FEBS'99
(Su/oth/271)
s163
radioactive and
13C-NMR
(Su/oth/273)
(Su/oth/272)
"
s164
(Su/oth/275)
Abstracts FEBS'99
Abstracts FEBS'99
s165
(134o/1.1/003)
(Mo/1.1/004)
s 166
(Moil.I/005)
Abstracts FEBS'99
s167
(Mo/7.2/007)
(Mo/'/.2/009)
conserved residues in each of the three IRE elements but also induces
reactivity changes outside of the IRE structures, restricted to a U-rich hairpin
loop located in close vicinity to the endonucleolytic cleavage site
Footprinting experiments using proteases with different specificities
were used to map the surface of the IRE binding site and to study iron-sulfur
reconstitution. The IRE induces protection in two define areas located in a
putative cleft of IRP-I. Interestingly, the reconstitution of the iron sulfurcluster induces strong protection in two regions which overlap the R N A
binding site
undergoes a structural
s168
(Mo/7.2/010)
Abstracts FEBS'99
(Mo/7.2/012)
on
the
(Mo/7.2/013)
Abstracts FEBS'99
(Mo/7.2/014)
s169
(Moll.2/015)
UPR 9002 du CNt~. I.BJd.C, 15 rue Descartes, gtrasbourg (F) and (*) Dpt of
Microbiology. Genett Center. SLU . Box 7025, Genet~kvaegen 5, S-75007 Uppsala, Sweden.
(Mo/7.2/016)
(Moll.2/017)
s170
Abstracts FEBS'99
(Mo/7.2/018)
(Mo/7.2/019)
(Mo/7.2/020)
(Mo/7.2/021)
(Mo/7.2/022)
s 171
s172
Abstracts FEBS'99
(Mo/11.2/025)
Abstracts F E B S ' 9 9
(lVlo/11.2/027)
s 173
The purpose of this study was to examine the effects of sphingosine and
sphingosine-l-phosphate on signal transmission in the B-adrenergic pathway
in cultured neonathal rat cardiomyocytes. The effects of these agents on
cAMP levels in stimulated and unstimulated myocytes were determined as
well as the effect on the rate of contraction of the cardiomyocytes. The cells
were incubated with 10~dvl sphingolipids for different periods of time after
which the cAMP levels or beating rates were measured without or after
stimulation with l~tM isoproterenol for 10 rain.
The results demonstrated that sphingosine and sphingosine-l-phosphate
may be involved in signal transmission in the B-adrenergic pathway.
Incubation with sphingosine or sphingosine-l-phosphate for 30 rain
decreased the cAMP levels after isoproterenol stimulation by 50% and 30%,
respectively, compared to control. Both these agents also lowered basal
cAMP levels after 30 min incubation and this effect of sphingosine was
observed already after 3 min. Furthermore sphingosine had a long-term (24
h incubation) negative effect on basal cAMP levels. The negative effect of
sphingosine on signal transmission in the B-adrenergic pathway was also
demonstrated by a significant reduction in the rate of contraction of the
(Mo/11.2/029)
Oallins, France. blnstimte Michel Pacha, 83500 La Seyne Sur Met, France.
cDepartment of Neurology, Harvard Medical School, MA 02114, USA
(M0/11.2/030)
s 174
Abstracts F E B S ' 9 9
(M0/11.2/031)
(M0/11.2/033)
(Mo/11.2/032)
(Mo/11.2/034)
Using the yeast two hybrid system we have identified a protein that
binds to phosphoinositide-specific phospholipase C1 (PI-PLCI) from
soybean. A cDNA clone of 2.7 kb has been isolated that encodes a
protein of 800 amino acids. No significant homology to known genes
could be found. However, a search in the "prints" database revealed
footprints of the rhodopsin superfamily of G-protein-coupled
receptors. The footprints map in the predicted transmembrane
domains of this new protein.
Southernblot analysis indicates that the gene is present in not more
than two copies in soybean. The gene is constitutively expressed in all
organs of the plant with very little variation in the expression level.
Moreover, almost identical amounts of mRNA were detected in
developing and mature tissues from leaves, flowers and fruits.
Homologous genes are present in Arabidopsis and rice.
Abstracts FEBS'99
s175
(Mo/11.2/036)
(Mo/11.2/037)
(Mo/11.2/038)
s 176
(Mo/11.2/039)
Abstracts FEBS'99
(Mo/11.2/040)
Opsin with the chromophore site empty has a very low catalytic rate of
transducin (Gt) activation m vitro. Binding ofaU-trans-retinal (atr) to opsin
enhances its activity towards Gtup to a maximum of 5% of the light-induced
activity (Meta II photoproduct). The activity is also seen with reductively
methylated opsin, in which the original binding site is blocked [1].
Moreover, air does not compete with 1 l-c/s-retinal incorporation into the
light-sensitive binding site during regeneration of opsin to rhodopsin, even
in an amount that saturates the activity of opsin/atr complex. This suggests
that the atr/opsin-complcx catalyzes Gt activation by different mechanisms
then Meta IL We have now studied the influence of phosphorylation and
palmitoylation on the atr promoted activity of opsin. Rhodopsin is palmitoylated at cysteines (Cyss22 and Cys323),thus forming the putative fourth
cytoplasmic loop of the receptor Atr recombines equally well with opsin
or phosphorylated opsin, leading to the same level of activity in the Gtct
intrinsic fluorescence assay. Reductive chemical depalmitoylation of opsin
reduces the activity to 25 % of the palmitoylated control. Repalmitoylation
of opsin by autoacylation with palmitoyl-Coenzyme A partially restores the
original rates of Gt activation.
The non-covalent opsin/atr complex represents an ,,agonist-like" second
signaling state (R**) which differs from photoactivated Meta II (R*).
It is not deactivated by phosphorylation The observation that its catalytic
efficiency is enhanced by palmitoylation suggests a functional role for this
modification.
[1] J~ger, S. et al., Biochemistry, 35 (1996) 2901
(Mo/11.2/042)
Molecular and biochemical characterisation of type 2 phosphatidic
acid phosphatases from guinea pig airway smooth muscle
A. E. McKie, P. L Darroch and S. Pyne
Department of Physio/og)' and Pharmacology, Untverstty of Strathclyde,
Glasgow, Scotland
Abstracts FEBS'99
(Mo111.21043)
s177
(Mo/11.2/044)
(Mo/11.2/045)
Macrophages Inhibit
Lymphocyte Proliferation byTransfering Phosphatidylcholine
Nishiyama-Naruke, A.; Curl, R. University ofSao Paulo, Physwlogy
and Btophysics Department, S~o Paulo,BrazlL
Previous studies have shown that cholesterol and fatty acids can be
transfered from macrophages to lymphocytes. In this work, we examined
whether phosphatidylcholine (PC) could be transfered between these cells
and also if this process could alter eoncanavalin A-stimulated lymphocyte
proliferation. To carry out the incorporation and tranference experiments,
we
used
PC- 1-stearoyl-2-[14C]-arachidonoy1 (14C-AA-PC) and
phosphatidyl.[n.methylJ4C]-eholine- 1,2 dipalmitoyl (t4C-choline-PC).
Macrophages incorporated t4C-AA-PC and exported the radioactivity to the
medium as fatty acids and PC. On the other hand, v~C-choline-PC
incorporated-macrophages exported the radioactivity basically as PC.
Compared to lymphocytes, macrophages exhibited a much higher rate of
~4C-AA-PC uptake, being mainly incorporated into phospholipid classes.
When co-cultured, V~C-AA-PC and ~4C.choline-PC incorporated by
macrophages were transfered to lymphocytes indicating that
phosphatidylcholine molecules were, in fact, transfered to lymphocytes.
Non-radiolabeled compounds: arachidonic acid-rich PC (AA-PC) and
arachidonic acid-poor PC (FA-PC) were used to study the transference
effects on lymphocyte proliferation. AA-PC and FA-PC added directly to
the medium of eoncanavalin A-stimulated lymphocytes or AA-PC- and FAPC-loaded macrophages co-cultured with lymphocytes were both able to
inhibit [~4C]-thymidine incorporation into DNA. In both cases, the inhibitory
effect of AA-PC was significantly more pronounced than that of FA-PC. In
conclusion: 1) PC is incorporated into macrophages and lymphoeytes, 2)
PC is transfered from macrophages to lymphocytes, 3) PC alone or PCloaded macrophages inhibit lymphocyte proliferation, 4) the PC inhibitory
effect on lymphocyte proliferation is more pronounced when AA-PC is
used.
Financial Support: FAPESP (95/9015-0; 93/3498-4), CNPq and PRONEX.
(Mo/11.2/046) INTERACTION
BETWEEN
GM1-GANGLIOSIDE AND
MEMBRANE-ASSOCIATED TUBULIN.
PALESTINI P.,
PITTO M., TEDESCHI G., FERRARETTO A., * BRUNNER
J.and MASSERINI M. Dept. of Med. Chem. and Biochemistry,
Milan, Italy and * E.T.H., Zurich, Switzerland
Gangliosides interact with other membrane components, including proteins,
affecting their functions and suggesting their involvement in events
occuring at the call surface. The aim of this work is to study the interaction
of gangliosides with specific proteins in neurons. The experimental model
system was constituted by rat carebellar granule calls in culture and by a
photoreactive, radiolabeled
GMl-ganglioside
derivative
TID-GM1,
s~nthesized in our laboratories. TID-GM1 is a 3-(trifiuoromethyl)-3-(m[ 5I]iodophenyl)-diazirin GM1, carrying both the photoreactive and
radioactive group in the caramide portion. This probe, after insertion into
the call membrane and illumination, covalently crosslinks neighbouring
proteins, that become labeled. TID-GM1 was dissolved in the medium for
call culture ( 10"e M final concentration). After 2 h at 37C. a number of
radiolabeled proteins was detected by 2D-EF and autoradiography. When
the experiment was repeated at 40C, a temperature at which no
endocytosis is reported to occur, only a few proteins were still radiolabeled,
suggesting their interaction with TID-GM1 at the plasma membrane level, in
particular, a major radioactive spot (MW of about 55 kDa and apparent pl
of 5 ). Immunoprecipitation experiments carried out with anti-s, anti-~ and
anti-acatyl-tubulin, showed that this is the main protein crosslinked by TIDGM1, suggesting the existence of a ganglioside-tubulin interaction within
the hydrophobic core of the plasmamembrane. The preparation of low
density detergent insoluble membrane fractions showed that tubulin
interacting with TID-GM1 was enriched in this fraction 10 fold with respect
to homogenate. The ganglioside-tubulin crosslinking product is susceptible
to KOH, but not to hydroxylamine treatment, suggesting that the interaction
is likely occurring between the caramide portion of the former and an
esterically-linked fatty acid anchor of the protein. The information that
membrane-associated tubulin and G proteins can form complexes makes
membrane-associated tubulin a candidate for endogenous modulator of G
protein-mediated signal transduction. Therefore, our results suggest that
also GM1 may participate to this process
s 178
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(Mo/11.2/050)
Abstracts F E B S ' 99
s 179
(Mo/12.1/053)
(Mo/12.1/052)
s 180
(Mo/12.1/055)
Abstracts
(Mo/12.1/056)
(Mo/12.1/058)
FEBS'99
processes
of
the
skin,
such
as
photoaging
and
(Mo/12.1/059)
s 181
(Mo/12.1/060)
UPR 9005 CNRS, 21, rue Ren~ Descartes 67084 Strasbourg, France
*Molecular Biology Dept, Moscow State University, Russia
Saccharomyces cerevisiae mitochondria contain a single nuclearencoded tRNA, tRNALys(CUU), imported from the cytosol. Its organellar
function remains still unclear [1,2]. We have constructed a set of mutant
tRNA TM transcripts and studied their aminoacylation, import into isolated
yeast mitochondria and ability to hind to the mitochondrial lysyl-tRNA
syntethase precursor (pre-MSK), which is thought to act as a carrier for
translocation of the tRNA across mitochondrial membranes [2].
Most of the changes in the anticodon of tRNALys(cuu) led to
decreased lysine aminoacylation and increased misacylation. In vitro
import assays showed that misaeylated tRNA variants can be imported. A
tRNA Lysvariant with an anticodon CAU(Met) is efficiently aminoacylated
by yeast MetRS and is imported in the misacylated form. Incorporation of
3ss-Met into newly-synthesized mitochondrial polypeptides was detected
after in vitro import of 35S-Met-tRNALyS(CAU). That means that the in
vitro imported tRNA can participate in mitoehondrial translation.
To validate the above conclusion by in vivo data, we used another
mutant tRNA TM version which contains the amber CUA anticodon and a
strong AIaRS aminoacylation determinant, G3:U70. In fact, this tRNA is
imported and is able to suppress an Ala->amber nonsense mutation in the
mitochondrial gene coding for the 2nd subunit of the cytochrome c oxidase
(COX2).
Supported by INTAS (grant N96-1515)
[1] Martin R.P. et al., Biochemistry, 18, 1979, 4600; [2] Tarassov I.A. et
al., E M B O J . , 14, 1995, 3461.
(Mo/12.1/061)
(Mo/12.1/062)
s 182
(Mo/12.1/063)
Abstracts F E B S ' 9 9
(Mo112.1/065)
Ultravlolct radmtton, particularly UVA, reduces to,~ic effccts and the skin is
~ts first target. It ~s well known that UVA causes considerable damage to skin
cells - The aim of this study was to evaluate the effects of UVA on
cellular prohfcrat,on assay and on the mltochondnal actl~lty of young and
aged human culturcd dermal fJbroblasts.
- For this purpose, Rhodammc 123 (Rh 123), a fluorcsccnt probe, was
u ~ d [~r the cvaluation of mxtcuzht~ndnaI actwlty. This spectflc Rh t23
fluorcsccncc depends on the nntochondrlal transmcmbranc potential. The Rh
1o_~ mcasurcment is gcncrally perlk)rmcd using flow cytometry (FCM), but
FCM is a slt)~ and cxpensl~e mcthtxl, not adapted to screening. Morcovcr,
Rh 123 can now bc detectcd dircctly m bye cells in 96-well mlcroplates [ ! 1
or Pctn dishcs (MiFALC tests) wJth a MIcroplate Cytofluorimeter (Huorolitc
I(X)O -DYNEX ) using cold hght fluorimctry (MCCM).I21 Thcrcfore,
MCCM was uscd to measure Rh 1 ~ fluorescence and then mitochondrial
actlvlt3 vanatlon after UVA trradlatlon m cultured human dermal flbroblasts.
-Resnlts : A decrease m Rh 123 fluorescence was observed m irradiated
cells as c~mparcd to sham-irradxatcd cells ~lth high significant dfffercncc
(p<_O.0()[). In our mtxlel, a Mtcrotitration Fluorimctnc Assa 3 on Live Celts
(MIFALC Tcst) [31 using Rhodaminc 1-3 probe, reveals UVA effects
whtch reduce an abt)ut 30c~ decrease c)l mJtochondnal activtty. Thts effect
appears lhr onl 3 after ~rradlatlon, ~ hereas 48 h are necessary to observed a
5()~ ccllular proliferation decrease. Moreover, a htgher scns~ttvtty of UVA
was obscr~ cd wtth aged fibroblasts compared to young ceils.
C o n c l u s i o n ' Then, mttochondrial actw~ty inJUry is a scns~twe and early
biomarkcr for UVA effects. Th~s new M~crotltratton Fluorimetrlc Assay on
Lwe Cells (MIFALC/ Rh 123 assay) can evaluate easily and directly in
m~croplate the early UVA effects in live human demaal fibroblasts.
[ 1 ]-Rat P. er al., Ceil B~ol. Toxicol , 1 0,(1994), 329
[ 2J-Rat P e r a l , Xlcth Enz.vmol, 252,(1995),331[ 3 ]-Rat P et al., Anirrt,'d Ahernati~ us, Welfare & Ethics, Elsevier, DAVS 27, (1997) 813
(Mo/12.1/064)
(Mo/12.1/066)
100 mg/ml (10%) of bovine serum albnmi, (BSA; Fraction V, Sigma) was
added to the physiological salt solution containing yeast hexokinase and
glucose, as external ADP regeneration system, to mimlc the uncofic
pressure of the cellular cytoplasm and to test for its effect on the external
ADP-dependent respiration of isolated rat heart mitochondria (MT) and
saponin- (SF) or sapunin plus crude collagenase-treated (SCF) cardiac
fibers. The medium with 2 mg/ml (0.2%) BSA was used as control. To
obtain the kinetic constants of oxidative phosphorylation the titration of
respiration was made by different ADP concentrations k,_ each separate
probe. It is assumed [1, 2] that apparent K~ of oxidative phosphorylation
for ADP reflects the outer mitochondrial membrane permeabi/ity for ADP.
We obtained that 10% BSA increased the apparent t ~ of oxidative
phosphorylation for ADP in MT and SCF by 70-90% (p<0.01) and had no
significant effect on AV,,~. However, the K~ value for ADP in SF in the
medium supplemented with BSA was even slightly lower '.hart in control
(by 20%; statistically not significant) and several times higher than that of
MT and SCF. AV,,~ was reduced by 23% (p<0.01). We assume that in
vivo the oucotic pressure plays little, if any, role in the regulation of the
outer mitochondrial membrane pores' permeability for ADP. It is more
likely that preserved intracellular structure or/end outer mitochondrial
membrane bound proteins (which remain in SF but not in SCF and MT
preparations) is respons~le for this property of membrane.
[ 1] Saks et al., Biochim Biophys Acta, I 144 ( 1993 ): 134.
[2] Gellerich et al., Eur J Biochem, 254 (1998)" 172.
Abstracts F E B S ' 9 9
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s 183
(Mo/12.1/068)
(Mo112.1/070)
s184
Abstracts FEBS'99
(Mo/12.1/072)
(Mo/12.1/073)
(Mo/12.1/074)
Abstracts FEBS' 99
(Mo/12.1/075)
s 185
(Mo/12.1/076)
(Mo/12.1/077)
(Mo/12.1/078)
The yeast cell wall has a dynamic structure. Its chemical composition and
structure change according to the strains, the culture medium and the
growth conditions. Phosphopeptidomannans (PPM) are the most peripheral
polymers of the cell, they participate in cell-cell recognition phenomena.
PPM are the ligands of lectins, the both components beeing involved in the
phenomenon of flocculation which is a reversible cell aggregation process.
In this study we show the possible influence of the mitochondrial
function in the synthesis of the cell wall constituents. Two strains of
S a c c h a r o m y c e s d i a s t a t i c u s were studied, a hight flocculent wild type strain,
and a less flocculent [rho ] mutant strain, obtained by ethidium bromide
treatment. We also studied the action of antimycin, a respiratory chain
inhibitor. By culture of the wild type strain in the presence of antimycin, the
cells became less flocculent.
To determine the respiratory chain influence on the biosynthesis of the
cell wall, yeasts were grown under aerobiosis, anaerobiosis and in the
presence of antimycin. We observed changes in the PPM chemical
composition of the respiratory chain deficient ceils compared to PPM of the
wild type cells. Moreover by treatment with mercaptoethanol, [rho ] PPM
showed a lower stability than wild type PPM. Alteration of the PPM leads
to a modification of the cell wall structure and in this case change in the cellcell aggregation phenomenon.
Mituchondria could be directly or indirectly involved in yeast cell wall
synthesis, m t D N A products may intervene in the expression of nuclear
genes which encode proteins involved in cell wall biosynthesis or in the
secretory pathway necessary for the biosynthesis of cell wall constituents.
Llltraviolet radiation, particularly UVA. reduces toxic effects and the skin is
its first target. It is well known that UVA causes considerable damage to skin
cells. - The aim of this study was to evaluate the effects of UVA on
cellular proliferation assay and on the mitochondrial activity of young and
aged human cultured dermal fibroblasts.
- For this purpose, Rhodamine 123 (Rh 123), a fluorescent probe, was
used for the evaluation of mitochondrial activity. This specific Rh 123
fluorescence depends on the mitochondrial transmembrane potential. The Rh
123 measurement is generally performed using flow cytometry (FCM), but
FCM is a slow and expenswe method, not adapted to screening. Moreover,
Rh 123 can now be detected directly in live cells in 96-well microplates [ 1 ]
or Petri dishes (MiFALC tests) with a Microplate Cytofluorimeter (Fluorolite
1000 -DYNEX ) using cold light fluorimetry (MCCM).[2] Therefore,
MCCM was used to measure Rh 123 fluorescence and then mitochondrial
activity variation after UVA irradiation in cultured human dermal fibroblasts.
-Results : A decrease in Rh 123 fluorescence was observed in irradiated
cells as compared to shamqrradiated cells with high significant difference
(p_<0.001). In our model, a Microtitration Fluorimetric Assay on Live Cells
(MIFALC Test) [3] using Rhodamine 123 probe, reveals UVA effects
which induce an about 30% decrease of mltochondrial activity. This effect
appears lhr only after irradiation, whereas 48 h are necessary to observed a
50% cellular proliferation decrease. Moreover, a higher sensitivity of UVA
was observed with aged fibroblasts compared to young cells.
Conclusion : Then, mitochondrlal activity injury is a sensitive and early
biomarker for UVA effects. This new Microtitration Fluorimetric Assay on
Live Cells ( M I F A L C / R h 123 assay) can evaluate easily and directly in
microplate the early UVA effects in live human dermal fibroblasts.
[l]-Ral P. et a l , Cell Blol, Toxtcol, 10,(1994), 329
[2J-Rat P e t al.. Meth Enzyrnol.. 252,(1995), 331[3J-Rat P. et a l . Ammal Alternatives. Welfare & Ethics, Elsevier, DAVS 2%(1997) 813
s 186
(Mo/12.1/079)
Abstracts FEBS'99
A biophysical characterization of
human mitoehondrial ereatine kinase isoforms
U. Schlattner and T. Wallimann
Creatine kinase (CK) isoenzymes, catalyzing the reversible transphosphorylation between ATP and phosphocreatine, play an important role in energy
buffering and energy transport of cells with high and fluctuating energy
demands [1,2]. Tissue-specific mitochondrial CK isnforms (Mia-CK and
Mib-CK), located in the mitochondrial intermembrane space, form homodimers and homooctamers. The octameric state was shown to be essential for
strong membrane binding [1], which in turn seems to be important for MiCK functions like: (i) metabolic channeling during "energy export" from
mimehondria into the cytosol [2,3], (ii) regulation of the mitochondriaI
permeability pore possibly involved in apoptosis [4] and (iii) crosslinking of
mitochondrial membranes (structural role).
We show here a functional comparison of human Mi-CK isoforms. A
pronounced difference between both isoforms was the low K m of Mia-CK
for Cr (1.0 mM) and ATP (0.1 mM), which may constitute an adaptation to
lower Cr/PCr levels in Mia-CK expressing tissues like brain. Dissociation of
octamers and reassociation of dimers was much slower for Mia-CK as
compared to human Mib-CK. Analysis of the thermodynamic octamer/dimer
equilibrium revealed that octamers of both human Mi-CKs are more stable
than e.g. octamcrs of chicken Mib-CK. Thermodynamic data also indicated
ciiffercoccs al the dimer/dimer interaction face of Mia-CK a,, compared to the
known Mib-CKs. Membrane binding kinetics of Mi-CK ~as monitored by
surface plasmon resonance (BiaCore/ using biotinylated cardiolipin-containing vesicles immobilized on an avidin-coated surface. Association and
dissociation kinetics of octameric Mi-CK fitted well to a model for heterogeneous interaction suggesting two independent binding sites [1]. Further
analysis revealed that both binding sites have similar association equilibrium
constants (affinity) and differ only in their rate constants (binding velocity).
Mia-CK showed slightly higher membrane affinity than human Mib-CK,
which is possibly due to an additional positive charge at the C-terminus.
[1] Stachowiaket at., Mol. Cell. Biochem. 184 (1998). 141; [2] Schlanneret al., Mol. Cell,
Biochent 184 (1998). 125; [3] Khuchua et al., J. Biol. Che~ 273 (1998), 22990; [4]
O'Gorman et aL, FEBS Lett. 4t4 (1997) 253
(Mo/12.1/081)
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[1] Wallace D.C. Proc. Natl. Acad. Sci. USA 91, 1994, 8739; [2] Entelis
N.S. et al., Proc. Natl. A c a d Sci. USA 95, 1998, 2338.
s 187
(Mo/12.1/084)
Abnormalities
Mitochondrial
of Mutant tRNAs
Encephalomyopathies
Responsible
for
Univq["Td~ 7-3-1
~,a
211,.lc~oan
s 188
Abstracts FEBS'99
(Mo/14.1/086)
(Mo/14.1/087)
The most widely used defense system in nature involves membranepermeabilizing peptides Biological activity of these molecules depends on
both their intrinsic properties (length, net charge, secondary structure,
hydrophobicity) and the characteristics of the target membrane (composition,
thickness, electrical potential) To elucidate their mechanism of action, a
minimalist approach consists in studying synthetic peptides differing in length
and sequence, but containing only Leu and Lys residues. We examined the
antibacterial effects of strongly hemolytic amphipathic Leu/Lys peptides on
bacteria devoid of a cell wall (mollicutes or mycoplasmas) The peptides used
in this work varied in length from 9 to 22 residues and adopted either a 13
sheet or an oc helical secondary structure. Finally, we studied the influence of
the target membranes on the activity of these molecules The antibiotic effects
of the ot helical peptides varied with their length, but not monotonously.
Peptides shorter than 12 or longer than 19 residues were quite ineffective As
for natural defense peptides, the primary effect of the most potent peptide (15
residues) was due to its ability in abolishing the proton-motive force. This
dose-dependent phenomenon was followed by the loss of motility, shape
change and splitting of the cells into rounded vesicles. This peptide remained
the most active one, independent of the bilayer thickness and of the presence
or absence of cholesterol Furthermore, 13 sheeted peptides were far less
potent than the ct helical ones Thus, as for the hemolytic activity, an cL helical
structure and a positive net charge proved to be sufficient to obtain a strong
antibacterial activity. The shorter peptides having weaker hydrophobicity and
the longer ones forming aggregates in buffer, the 15-residue peptide
constitutes the best compromise for an optimal association with the
membrane The first limiting step of the mechanism of action is probably an
accumulation of monomers on the membrane surface, followed by structural
changes (aggregation, orientation) which modify membrane permeability and
also membrane fonction
This work is performed in the frame of the GDR/CNRS 790 "Pepudes & Proteincs
Membranotropes"
* Present address : Laboratoire de TechnologicEnzy_matNue, UTC, Compl+gne, France
(Mo/14.1/088)
C1C-3, CIC-4, and CIC5 form a distinct branch of the CLC chloride
channel family. Although C1C-5 was shown to be mainly expressed in
endocytotic vesicles, expression of CIC-5 in Xenopus oocytes elicited
chloride currents [1,2].
Like CIC-5, CTC-3 and C1C-4 predominantly localize intracellularly after
heterologous expression in COS-7 cells. We could show that CIC-4 gives
rise to strongly outwardly rectifying anion currents when expressed in
oocytes. They closely resemble CTC-5 currents with which they share a
NO3-> CI- > Br- > I- conductance sequence that differs from that
reported for the highly homologous CIC-3. Both CIC-4 and CIC-5
currents are reduced by lowering extracellular pH. We could also
measure similar currents after expression of each channel in HEK293
cells.
To demonstrate that these currents are directly mediated by the channel
proteins we introduced several point mutations that change channel
characteristics. In CIC-5, several point mutations alter the kinetics of
activation but leave macroscopic rectification and ion selectivity
unchanged. A mutation (N565K) equivalent to a mutation reported to
have profound effects on C1C-3 does not have similar effects on CIC-5.
By contrast, a mutation at the end of D2 (S 168T in C1C-5) changes ion
selectivity, and a mutation at the end of D3 (E211A in CIC-5 and E224A
in CIC-4) changes voltage-dependence and ion-selectivity. This shows
that CIC-4 and CIC-5 are indeed chloride channels that directly mediate
chloride currents [3].
[1] Steinmeyer et a1.(1995) J. Biol. Chem. 270, 31172-31177
[2] Gianther et al. (1998) Proc. Natl. Acad. Sci. U. S. A. 95, 8075-8080
[3] Friedrich et al. (1999) J. Biol. Chem. 274:896-902
(M0/14.1/089)
s 189
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Among several biological functions, the epidermal mucus of fish may play an
important role in host defense, particularly in the prevention of colonization
by parasites, bacteria and fungi. After a first step of purification, watersoluble and hydrophobic material from lyophilized epidermal mucus, were
separated. When reconstituted in planar lipid bilayers, the hydrophobic
component induced a pore-forming activity, well correlated to a strong
antibacterial activity against several bacteria strains [1]. These results suggest
that fish mucus possess antibacterial proteins able to permeabilize
membranes of target cells and thus act as a defense barrier. A protein of 63
kDa was isolated from the hydrophobic part by SDS-PAGE and reconstituted
into planar lipid bilayers induced large ion channels. To test the potential role
of this protein in the defense process, the antibacterial activity of this 63 kDa
protein was determined against several bacteria (Gram + and Gram -).
Finally, secondary structure assessment using circular dichroism indicated
this protein is mainly composed of helix and unordered structures.
PhystoL
(In press)
s 190
(Mo/14.1/093)
Abstracts F E B S ' 9 9
(Mo/14.1/094)
(Mo/14.1/095)
(Mo/14.1/096)
Abstracts FEBS'99
(Mo/14.11097)
s191
(Mo/14.1/098)
(Mo/14.1/099)
2 + .
(Mo/14.1/lO0)
s192
(Mo/14.1/101)
Abstracts FEBS'99
(Mo/14.1/102)
(Mo/14.1/103)
I d e n t i f i c a t i o n o f a m i n o acids c o n t r i b u t i n g to the
p o r e o f the F M R F - a c t i v a t e d s o d i u m c h a n n e l
(M0/14.1/104)
The aim of this work was to study the implication of CFTR expression
in the Cl- handling in mouse renal epithelium. For this purpose we performed
primary cultures of proximal convoluted (PCT), distal convoluted (DCT) and
cortical collecting (CCT) tubules from wild type (cftr +/+) and CFTR knockout (cftr -/-) mice. Tubules were microdissected from collagenase treated
kidney, seeded on collagen coated Petri dish and grown in hormonally defined
medium supplemented with 1% SVF. CI" conductances were analyzed by the
whole cell clamp technique with 140 mM NMDGC1 in the pipette and in the
bath.
In cultured DCT and CCT from cftr +/+ mice, forskolin (10 ttM)
activated a conductance with a linear I/V relationship.This conductance was
inhibited by I", insensitive to DtDS (1 raM) and shared the characteristics of
the CFTR-CI" current. Occasionally, forskolin induced a very weak linear
current in cultured PCT from ct~r +/+ mice. On the contrary, the addition of
forskolin did not elicited significant currents in PCT, DCT and CCT cell
cultures originating from cftr -/- mice. In all cultures obtained from cfir +/+
and -/- mice, ionomycin stimulated outwardly-rectifying CI" currents in the
presence of 100 nM free calcium in the pipette solution. These currents
increased during depolarized voltage pulse and exhibited the kinetic
characteristics of the Ca2+- activated CI" conductances found in other epithelia.
A third C1- conductance was identified in PCT, DCT and CCT cultures from
cftr +/+ and cftr -/- mice. It was activated by a hypo-osmotic shock. These
large, outwardly-rectifying currents showed time-dependent inactivation at
depolarizing potentials.
In conclusion, 1) the inactivation of the gene encoding CFTR induced
the disappearance ofa forskolin-activated CI" conductance localized mainly in
DCT and CCT tubules. 2) the genie inactivation of CFTR did not modify
significantly Ca ++and volume- activated CI" conductances.
Abstracts F E B S ' 9 9
(Ma/14.1/105)
s193
(Mo/14.1/106)
2+
Aquaporms are members of the famdy of major intrinsic proteins (MIP) that
transport water. Some of them are selective for water (AQP1, AQP2...) but others, as
AQP3 and AQP7, also transport small solutes such as glycerol and urea AQPI has
been shown to form a tetramer even if monomers alone are able to transport water.
The pore for water is formed reside the monomers, but we don't know ff water and
solutes are sharing the same pore or a distract one. In order to characterize the
segments involved m the solute permeability, we used chimeras of aquaponns
presenting differences in their selectivity. Their function was tested in Xenopus
oocyte. Chimeras whom hydrophlhc C-terminal sequences were exchanged between
AQP2 and AQP3 (AQP2-CT3 and AQP3-CT2), had a lower water permeabihty than
wild aquaporms (PfAQP2 = 9.4 l0 -3 + 1.1 10-3 crd/s, PfAQP2-CT3 ~ 37 %
PfAQP2, PfAQP3 = 9.9 10-3 _+ 0.9 l0 "3 crrds, PfAQP3-CT2 -= 15 % PfAQP3).
Moreover, AQP3-CT2 chimera showed 69 % of AQP3 glycerol permeabihty. These
results suggest that the C-terminal could take part in the formation of the water pore
but would not be essenttal for the glycerol pore. Chimeras with exchanges from the
second NPA box (AQP2-NPA'3 et AQP3-NPA'2) showed absent or reduced water
permeabihty (PfAQP2-NPA'3 = 1 % PfAQP2, PfAQP3-NPA'2 = 30 % PfAQP3).
Glycerol permeabihty of AQP3-NPA'2 yielded only 7 % of that of AQP3. Part of E
loop and/or the last transmembrane segment could be involved m glycerol transport.
Expression of chimeric aquaporms m oocytes was tested by western-blot on total
membranes and by lmmunofluorescence for some of them.
We analysed the results according to the hourglass model, proposed by Jung et al. in
1991 (represented above) in which B and E loops fold back into the membrane and
together form the water pore. In this hypothesis, chimeras hawng heterologous B and
E loops could constitute an inefficient pore, due to the low sequence identity of these
two loops m AQP2 and AQP3 The construction of AQP2 with loops B and/or E
from AQP3 and of AQP3 with loops B and/or E from AQP2 are now m progress.
(Mo/14.1/107)
(Mo/14.1/108)
Thesigmaligand( + ~ e
O. ~ ,
L Gaziff
s194
(M0/14.1/109)
Abstracts FEBS'99
(Mo/14.1/110)
At early stages of life, high amounts of calcium are required for the
rapid growth. This calcium may result from kidney reabsorption particularly
in the distal portion of the nephron where a hormonal regulation occurs.
Segments of the rat proximal and distal tubules were microdissected from 7
day-old Wistar rat. Proximal convoluted tubule (PCT) and cortical
collecting duct (CCD) cells were grown on collagen coated Petri dishes in a
hormonally defined medium. The intracellular calcium concentration was
measured in 3- to 5-day-old CCD or PCT monolayers using fura2/AM and
fluorescence video microscopy technique. CCD cells showed an increase in
[Ca], in response to AVP. This effect, specific for CCD cells, indicated that
these cultured cells retained same physiological properties of the original
tissue
To characterize the AVP reduced [Ca ], increase we used mfedipme, that m
adult rat &stal tubules inhibits the [Ca ], increase secondary to a hormonal
stimulus. Surprisingly we found that nifedipine (20~tM) produced an
increase in [Ca2+], from 87.54.0 nM to 402.828.5 nM in 65% of the CCD
cells. Similar effect was observed with other dihydropyridines (BayK 8644,
isradipme). Verapamil did not induce [Ca2+], rise. Experiments in presence
of EGTA showed that external calcium required for nifedipine effect.
Dihydropyridines did not induce any [Ca2], increase in cultures obtained
from PCT. In CCD cells the nifedipine effect was observed more frequently
in newborn than in adult rat Electrophysiological experiments performed by
the whole cell clamp technique showed an inwardly directed calcium current
activated by 201aM nifedipine. Unitary channel clamp technique also
showed an important exit of K* after nifedipine addition. In Fura2
experiments, clamping the membrane potential with valinomycin did not
modify the increase m [Ca ]i reduced by mfedipme.
We conclude that newborn rat CCD cells in primary culture exhibit a
nifedipine-activated calcium permeability. Experiments are now undertaken
to precise the nature of this permeability (i.e. calcium leak channels).
2 +
2+
2+
Abstracts FEBS'99
s195
(Mo/18.1/112)
(Mo/18.1/113)
(Mo/18.1/114)
s196
Abstracts FEBS'99
(Mo/18.1/116)
e ,
Interactions between the epithelial cells and the basement membrane play a
key role during airway development, by modulating cell proliferation,
migration and differentiation. These interactions are mediated by integrins,
cell surface receptors composed of non-covently linked 0t and ,[3 subunits. In
order to assess the role of lamimn 5 (LNS), a basement membrane adhesion
ligand composed of the 0`3, ~3 and 72 chains, and its receptors ot3131, o6131
and 0`6]34 integrins, during branching morphogenesis, we developed an in
vitro culture model. Human fetal tracheal explants were seeded on a type I
collagen matrix. Epithelial cells grew and proliferated on the matrix around
the explants (2D cultures). These cultures were then overlaid by a second
collagen layer to form a sandwich configuration (3D cultures). This
overlaying induced branching morphogenesis and tubule formation. By
immunocytochemistry, we demonstrated that the epithelial cells of the
outgrowth produced the 0`3, [33 and y2 chains of LN 5 on the collagen matrix
in 2D cultures. In contrast, LN5 was not detected around the tubules formed
in 3D cultures. In 2D cultures, epithelial cells in close contact with the
collagen matrix expressed the 0`3, 0.6, ]31 and ]34 integrin subunits while
these cells in the tubules formed in 3D cultures only expressed 0.6, [31 and [34
subunits. Incubation of 2D cultures with blocking anti-LN5 antibodies
significantly decreased the migration speed of the outgrowth peripheral cells.
Inhibition of the branching morphogenesis was also observed in cells
overlaid by collagen to form 3D cultures. Our results suggest that LN5 plays
a major role in epithelial cell migration, specifically during branching
morphogenesis, and that ~6131 and e~6!34 integrins are involved in
tubulogenesis in vitro.
C. Coraux is a fellowship funded by MESR (Minist~re de L'Enseignement et
de la Recherche).
(Mo/18.1/118)
In an attempt to define more about the role of talin on integrin expression and
function, we decided to examine the effect of de novo expression of an
exogenous integfin by the talin deficient cells that we have previously
charactefised [1]. In these cells the level of talin is reduced down to 20-40 %
of that normally found in wild type cells, cDNAs coding the platelet integrin
~IIb[33 which functions as receptor for fibrinogen and fibronectin were
transfected in talin deficient cells (AT22) and we examined the effects of this
de novo expression on cell adhesion and focal contact formation. Our major
finding are as follow: (a)The exogenous integrin is produced with
conformationat change similar to that we have previously reported on the
endogenous
[31 class of integrin. This result according with our previous
observations on the/31 class of integrins focus our attention on a potential role
of talin on the processing of the integrin heterodimer that will be normally
associated with it. (b) The cxlIb[33heterodimer is abnormally localised to focal
adhesion when the cells are plated on fibronectin and this recruitment is ligand
independent. This abnormal recruitment was already observed by others with
the non activable ~llb(A996)/~3 mutant. Alternatively, our results may suggest
that the lack of interaction between talin and cytoplasmic domains of the
integrin influences its recruitment to focal contact independently
to the
extracellular ligand activity.
1. Albigbs-Rizo et al, J.Cell Science(1995) 108, p 3317
s196
Abstracts FEBS'99
(Mo/18.1/116)
e ,
Interactions between the epithelial cells and the basement membrane play a
key role during airway development, by modulating cell proliferation,
migration and differentiation. These interactions are mediated by integrins,
cell surface receptors composed of non-covently linked 0t and ,[3 subunits. In
order to assess the role of lamimn 5 (LNS), a basement membrane adhesion
ligand composed of the 0`3, ~3 and 72 chains, and its receptors ot3131, o6131
and 0`6]34 integrins, during branching morphogenesis, we developed an in
vitro culture model. Human fetal tracheal explants were seeded on a type I
collagen matrix. Epithelial cells grew and proliferated on the matrix around
the explants (2D cultures). These cultures were then overlaid by a second
collagen layer to form a sandwich configuration (3D cultures). This
overlaying induced branching morphogenesis and tubule formation. By
immunocytochemistry, we demonstrated that the epithelial cells of the
outgrowth produced the 0`3, [33 and y2 chains of LN 5 on the collagen matrix
in 2D cultures. In contrast, LN5 was not detected around the tubules formed
in 3D cultures. In 2D cultures, epithelial cells in close contact with the
collagen matrix expressed the 0`3, 0.6, ]31 and ]34 integrin subunits while
these cells in the tubules formed in 3D cultures only expressed 0.6, [31 and [34
subunits. Incubation of 2D cultures with blocking anti-LN5 antibodies
significantly decreased the migration speed of the outgrowth peripheral cells.
Inhibition of the branching morphogenesis was also observed in cells
overlaid by collagen to form 3D cultures. Our results suggest that LN5 plays
a major role in epithelial cell migration, specifically during branching
morphogenesis, and that ~6131 and e~6!34 integrins are involved in
tubulogenesis in vitro.
C. Coraux is a fellowship funded by MESR (Minist~re de L'Enseignement et
de la Recherche).
(Mo/18.1/118)
In an attempt to define more about the role of talin on integrin expression and
function, we decided to examine the effect of de novo expression of an
exogenous integfin by the talin deficient cells that we have previously
charactefised [1]. In these cells the level of talin is reduced down to 20-40 %
of that normally found in wild type cells, cDNAs coding the platelet integrin
~IIb[33 which functions as receptor for fibrinogen and fibronectin were
transfected in talin deficient cells (AT22) and we examined the effects of this
de novo expression on cell adhesion and focal contact formation. Our major
finding are as follow: (a)The exogenous integrin is produced with
conformationat change similar to that we have previously reported on the
endogenous
[31 class of integrin. This result according with our previous
observations on the/31 class of integrins focus our attention on a potential role
of talin on the processing of the integrin heterodimer that will be normally
associated with it. (b) The cxlIb[33heterodimer is abnormally localised to focal
adhesion when the cells are plated on fibronectin and this recruitment is ligand
independent. This abnormal recruitment was already observed by others with
the non activable ~llb(A996)/~3 mutant. Alternatively, our results may suggest
that the lack of interaction between talin and cytoplasmic domains of the
integrin influences its recruitment to focal contact independently
to the
extracellular ligand activity.
1. Albigbs-Rizo et al, J.Cell Science(1995) 108, p 3317
Abstracts FEBS'99
(Mo/18.1/119)
The
gene
CMAR
(" Cell
Matrix
Adhesion
Regulator "),localized in 16q24.3, codes a protein consisting of 82 amino
acids which have been described to modulate cellular adhesion via the
integrin cc2131. A polymorphism in the CMAR locus resulting from a
CACA insertion produces the ancestral smaller CMAR protein called
"Variant-C ". In human, the two mRNA can coexist in the same cell.
These proteins share the same N-terminus but differ by their C-terminus
with loss of a putative tyrosine phosphorylation site. However, the precise
role of these two proteins remains to be determined.
Comparative analysis of adhesion capacity of the different clones
established from the colorectal HT29 cells transfected by the fusion GFPCMAR or GFP-Variant C indicate that, while only CMAR increases the
cellular adhesion on collagen matrix (type I and IV), both CMAR and
Variant C favors the cell-cell aggregation. These effects on cellular
adhesion were correlated with the number of CMAR transcripts which are
very stable compared to the protein. According to these observations, we
propose that CMAR could be a regulator of adhesion process, with two
different functional domains. The N-terminus favors cell-cell contacts
which correspond to the ancestral function, while acquisition of the Cterminal tyrosine phosphorylation site regulates the adhesion of cell to the
extracellular matrix.
Preliminary experiments with lysophosphatidic acid (LPA), an
activator of the small GTPase protein Rho, suggest that CMAR could
participate in this transduction pathway already described to modulate
cellular adhesion processes. Further investigations concerning the
signaling pathway involving CMAR could be determinant for the
involvement of this protein in tumor progression and embryogenesis, two
process where cellular adhesion is often perturbed.
(M0/18.1/121)
TGF-131dependent regulation of adhesion receptor and intracellular signalin~ molecule expression in HT-144 melanoma cells
B. Janjia, V. Gouon, C. Melchior~, and N.Kieffer~. ~LaboratoireFraneoLuxembourganis(CRP-Santt/CNRS), Luxembourg.bDepartmentof
Molecular Biology, Albert EinsteinCollege of Medicine, Bronx,NY, USA.
We have recently shown that two human melanoma cell lines, the
metastatic HT-144 and the non-metastatic SK-Mel-2 ceils, exhibit
marked in vitro heterogeneity with respect to integrin expression,
migration and invasion potential. Here we provide evidence that HT-144
melanoma cells, but not SK-Mel-2 ceils, undergo a reversible transition
to a fibroblastoid morphology following treatment of the ceils with either
their own serum-free acidified conditioned medium, or with biologically
active exogenous TGF-131, thus identifying TGF-131 as an autocrine
regulator of the spindle shape morphology of HT-144 melanoma cells.
The fibroblastoid phenotype correlated with up-regulated 131 and 133
integrin expression and down-regulated E-cadherin expression, as shown
by flow cytometry, Western blot and RT-PCR analysis, as well as upregulated expression of the metalloproteinase MMP-9, as demonstrated
by zymography. Our data further demonstrate TGF-131 dependent upregulation of ILK and nuclear translocation of 13-catenin suggesting that
in the metastatically competent HT-144 cells, ILK acts downstream of the
autocrine TGF-131 loop as a common intracellular regulator responsible
for the metastatic phenotype of HT-144 melanoma cells. [1] Gouon et al.,
Int. J. Cancer, 68, (1996) 650.
s197
(Mo/18.1/120)
Vascular endothelial cells recognize blood borne circulating ceils that they
allow to extravasate in a tissue-specific manner. This property determines
the selectivity of lymphocyte homing, which is fundamental in physiological
(immune response) as well as pathological processes (inflammation,
autoirnrnune diseases, metastasis). To study these phenomena, eight
microvascular endothelial cell lines were established. Endothelial cells
(ECs), isolated from infiarnmed lymphoid tissues (lymph nodes and
appendix) [1] and from non lymphoid immune effector sites: intestine,
lung and skin, were immortalized. Their general endothelial
characteristics, such as the presence of vonWillebrand factor (wWf),
angiotensin converting enzyme (ACE) as well as the intracellular Eselectin, were preserved [2]. Furthermore, this paper describes the distinct
phenotypic characteristics of these cell lines in relation to their tissue
origin [3]. Hence, endothelial cells from lymph nodes expressed GlyCAM1, PNAd.JG-I, sLeX and CD34 antigens, but did not express P-selectin.
ECs from non lymphoid immune effector sites were ICAM-1 and CD49e
positive, all but one were P-selectin positive. ECs from mucosal sites were
strongly MAdCAM-I positive. Endothelial cell lines were shown to
selectively bind lymphoblastoi'd T cells, in a specific manner according to
their tissue origin and in relation to the expressed cell adhesion molecules.
These data demonstrate the potential of such a panel of endothelial cells in
deciphering the molecular mechanism involved in cell-cell interactions. [1]
Bizouarne, N. et al., Biol Cell, 79 (1993) 27; [2] Bizouarne, N. et al., Biol
Cell, 79 (1993) 209 ; [3] Denis, V. et al., J L e u k o c BioI, 60, (1996) 744.
s 198
(Mo/.18.1/123)
Abstracts F E B S ' 9 9
(Mo/18.1/124)
(Mo/18.1/125)
(Mo/18.1/126)
Integrins are noncovalently associated ct13 heterodimers that mediate ceUcell or cell-matrix interactions. Integrin function is regulated through
eonformational changes mediated by the interaction of the integrin
cytoplasmic tails with cytoskeletal proteins and signaling molecules. The
platelet ~xlIb133 integrin functions as an inducible fibrinogen receptor, and
promotes platelet aggregation at the site of vascular injury, but its regulation
is still not clearly understood. The newly identified calcium- and integrinbinding protein CIB, present in platelets, interacts specifically with the
cytoplasmic domain of ctlIb. In order to address the question whether CIB
acts as a regulatory molecule modulating ~xlIb133 function, we determined
the intracellular localization of CIB, fused to the C-terminus of the green
fluorescent protein GFP and transiently transfected in CHO cells expressing
ctlIb[33. In cells adherent on fibrinogen, GFP-CIB was found both in the
cytoplasm and the nucleus, but no association with focal adhesions could be
demonstrated, in contrast to the cytoskeletal protein GFP-Zyxin that clearly
colocalized with cdlb133 in adhesion plaques. To test whether CIB could
modulate the ctllb!33 affinity state, we investigated the binding of mAb
PAC I, a fibrinogen-mimetie, to transfected cells by flow cytometry. Cells
coexpressing ~xlIb[33 and GFP-CIB did not bind PAC1, suggesting that CIB
may not be involved in MIb133-mediated inside-out signaling. Finally, using
reverse transcriptase-polymerase chain reaction performed on total RNA
from various cell lines, we detected CIB mRNA in non-megakaryocytic cell
lines, showing that CIB might be expressed in the absence of the ~xlIb
subunit. Taken together, these results question the regulatory role of CIB in
integrin etIlb133 activation, and suggest its implication in integrinindependent processes.
Abstracts FEBS'99
(Mo/18.1/127)
s199
(Mo/18.1/128)
paralleled
This study investigated the effects h~ vitro of human growth hormone (hGH) on
osteoclastic resorptmn in an unfractionned rabb~t bone cell model. We also
investigated the mechanisms implicated in the osteoclastic resorption like the
proteasic activity and the role of bone matrix proteins on these mechanisms.
After four days of culture on denUne slices, hGH (1, 10, 50 ng/ml) and human
insulin growth factor I (hlGF-1 : 1, 10, 50 ng/ml) stimulated significantly the
resorption activity induced by rabbit bone cells in term of the percentage of
dentine slice surface resorbed, the number of lacunae per surface unit and the
mean area of lacunae as compared to the control. When neutralizing anti-serum
against hIGF- 1 (4 gg/ml) was added at the start culture, the stimulator3,' effects of
hlGF-I and hGH on osteoclastic resorption activity were totally abolished.
These results indicate that the effects of hGH sttmulatior on osteoclastic
resorption in vitro are mediated via local hlGF- 1 secretion by stromal cells such
as osteoblasts. As fonctionnally specific hIGF-1 receptors have recently been
reported on rabbit mature osteoclasts, a direct action of hlGF- 1 on the activation
of osteoclast could be envisaged. The experiments also showed that hlGF- 1 and
hGH stimulated the production of cathepsins and matrix metalloproteases MMP9 and MMP-2. Similar to the resorption acuvity, hGH stimulated the proteasic
activity via production of hIGF-1 by stromal cells. In a second time, the
influence of organic matrix protems, such as vitronectln, on osteoclastic
resorption and proteasic activity was examined. When dentine was precoated
with vitronectin, the proteasic and resorption acuvity was significantly stimulated
in presence of hGH and hlGF-1 compared to the activity on alone dentine shoes.
When antiserum against vltronectin receptor (ctv[~3 integrin) was added, the
metalloproteasic activity was reduced. This results indicate that the stimulation of
proteasic and resorption activity are dependent of the cell adhesion to vitronectln.
This study suggest that the proteastc activity and the resorptlcm actlwty in our
rabbit bone cell model are the work of the osteoclasts. To confirm this
hypothesis, a new model using purified osteoclasts will be developed.
(Mo/18.1/130)
s200
(Mo/18.1/131)
Abstracts FEBS'99
Integrins are ct/13 heterodimeric cell surface receptors that promote adhesion,
and also transfer information into and out of a cell. Integrin cytoplasmic
tails play a crucial rote in these processes, presumably through
modifications of their own structural and spatial organization, and/or
through interactions with specific cytoplasmic components. We have used
recombinant or synthetic t~IIb and 133 integrin cytoplasmic peptides to study
their in vitro complexation and ligand binding capacity by surface plasmon
resonance. J13 heterodimerization occurred in a 1:1 stoichiometry with a
weak KD in the laM range resulting in a transient binding. Divalent cations
were not required for this association, but stabilized the u/13 complex by
decreasing the dissociation rate. tx/13 complex formation and stabilization
were both impaired by the R ~ A substitution or the KVGFFKR deletion in
allb, but not by the 133 $752P mutation, indicating that the ctlIb membraneproximal sequence is necessary to support these processes, whereas the [~3
C-terminus is not Recombinant calcium-and integrin-binding protein (CIB),
an ~Ilb-specific ligand, bound to the (tlIb cytoplasmic peptide in a Ca2+- or
Mn2+-independent, one-to-one reaction with a Kr) of 12 ~tM. In contrast, m
vitro liquid phase binding of CIB to intact cdlb133 occurred preferentially
with Mn2+-aetivated tllb133 conformers, as demonstrated by enhanced
coimmunoprecipitation of CIB with PAC-l-captured Mn2+-activated
cdlb133, suggesting that Mn2+ activation of intact o~IIb133 induces the
exposure of a CIB binding site, spontaneously exposed by the free ctllb
peptide. Since CIB did not stimulate PAC-1 binding to inactive cdlb133, nor
prevented activated ctllbj33 occupancy by PAC-1, we conclude that CIB
does not regulate ctllb133 inside-out signaling, but rather is involved in an
o~Ilbl33 post-receptor occupancy event.
(Mo/18.1/132)
P E C A M - I F U N C T I O N A L ASSOCIATION
TO PI-3K IN HUMAN NEUTROPHILS.
M.R. Zocchi 1, A. Poggi 2 and F. Pellegatta 1.
lS, Raffaaele Scientific Institute 1.20132 Milan.
2National Cancer Institute-ABC, 1-16132 Genoa.
Abstracts FEBS'99
s201
Whereas the idea of selective competition between species dates back to Greek
philosophers such as Aristotle, the concept of transformism or filiation of species
was suggested for the first time on a scientific basis by J.B, Lamarck
(Philosophic Zoologique, 1809). During the XIXth century, comparative
anatomy, physiology, embryology, paleontology and genetics have progressively
imposed the evolution of species at the organismal level. The XXth century,
through biochemistry, biophysics, molecular biology and structural biology, has
set up all aspects of life on the molecular scene. In this transposition, a single
species such as man is roughly represented by about 100.000 distinct
genes/proteins and a confrontation between organismal evolution and multiple
molecular evolutions arises. Important disagreements appear between evolutionary clocks based on fossil records and RNA/protein sequences, respectively,
as well as in the branching of several groups in phylogenetic trees.
As the driving force for species evolution, Lamarck proposed adaptation to the
medium (heredity of acquired features) whereas Darwin, half a century later,
suggested natural selection. Modern neo-Darwinism couples random gene
mutations with molecular selective pressure. Despite adaptationism has never
been experimentally proved at the organismal level, introduction into the genome
of some retro-information coming from the medium is no longer a proscribed
concept. In addition to rico-Darwinism and neo-Lamarckism, new theories have
emerged, based on knowledge of genome and proteome sequences, In neutral
evolution or genetic drift proposed by Kimura, most of nucleotide or amino acid
substitutions are fixed without selection. In genomic drive, DNA turnover is
determined by its own physico-ehemical laws (selfish DNA). The duplication
propensity of DNA explains the progressive increase of genome sizes from
bacteria to vertebrates with creation of multigene families and therefore multiple
paralog protein lineages. Polypeptide chain self-folding and folding by
association build up protein shapes (conformations) crucial for specific
interactions involved in cascades leading to the physiological functions. Whatever
the driving force of evolution, it must first act on conformations through
variations of nucleotidedamino acid sequences.
Using the 12 neurohypophysial preprohormones we have characterized in vertebrates, implications of the above evolutionary mechanisms have been searched
for. Amino acid substitution rates greatly vary between the 3/4 domains of the
precursors, suggesting distinct domain subevolutions.Two ortholog lineages can
be traced from bony fishes to mammals. Duplications giving rise to additional
paralog lineages can be observed in marsupials and in cartilaginous fishes. Botb
neutral and selective evolutions seem to have operated on nonapeptide hormon
sequences, although a common gross conformation was preserved in all neur
hypophysial hormones.
(Mo/1.2/135)
(Mo/1.2/136)
s202
Abstracts FEBS'99
(Mo/1.2/139)
(Mo/1.2/140)
Abstracts FEBS'99
(Mo/1.2/141)
s203
(Mo/1.2/142)
Polyplastron multivesiculatum.
b ~INRA de Theix, St Genes Champanelle, France
Rowett Research Institute, Aberdeen, Scotland, UK
(M0/1.2/143)
~lSERMU383 ~
(Mo/1.2/144)
s204
Abstracts FEBS'99
(Mo/1.2/145)
(Mo/1.2/146)
(Mo/1.2/147)
(Mo/1.2/148)
Especially in the amplification of low copy number targets in a background of non-specific nucleic acids "hot start" polymerase chain reaction
(PCR) has been shown to eliminate undesirable amplification products [ 1]
Hot start PCR has been implemented so far by mechanically separating a
reagent, by blocking the polymerase with an antibody, by using modified
forms ofDNA polymerases that are inactive at room temperature or by
using single-stranded DNA aptamers that were shown to inhibit the
activity of various enzymes at temperatures below 40C [2].
We describe a new method for producing hot start conditions: The DNA
polymerases from Thermus aquaticus and Thermusflavas were found to
bind efficiently to short double-stranded DNA fragments without sequence
specificity. This property is exploited by immobilizing the polymerase to
such fragments before its addition to the PCR mixture. The temperature at
which the polymerase molecules are detached upon starting the reaction is
adaptable to the conditions required via the melting temperature of the
DNA fragments. Furthermore - in contrast to existing methods - the
protection against mispriming at a lower than the optimal annealing
temperature is not restricted to the reaction setup, but persists throughout
the PCR reaction.
[I] Chu, Q. et al., Nucleic Acids Res., 20, (1992) 1717.
[2] Lin, Y. et at., J.MolBiol., 271, (1997) 100.
Abstracts FEBS'99
(Mo/1.2/149)
s205
(Mo/1.2/150)
(Mo/1.2/151)
The initial genetic events associated with the emergence of new functions
during Primate evolution remain largely debated. The so-called "potogenes"
may represent a "reservoir" of modular elements which may be reactivated and
led to a functional phenotype completely different from this of the original
founder gene [1]. P M C H L 1 and P M C H L 2 are two copies, respectively on
human chromosome 5p14 and 5q13, of the variant melanin-concentrating
hormone (MCH) gene, a 5' end truncated version of the P M C H gene mapped
on chromosome 12q23. Both variant MCH genes emerged recently during
Primate evolution by a combinaUon of translocation, duplication and truncation
events occurring sequentially in the Hominoidea lineage [2]. The questions of
the regulation and putative functions of these genes in Primates are central
issues we examined here. We established first the structure and fine
chromosomal mapping of the variant MCH genes on human chromosome 5
and revealed several point mutations and the presence of CA/I'A repeats that
allowed to discriminate between both copies. Using a combination of RACEPCR, RT-PCR and sequencing analysis we provide strong evidences for the
expression of P M C H L 1 but not P M C H L 2 gene in the human fetal, new-born
or adult brain. Sense potentially coding RNAs as well as non-coding antisense
RNAs were identified and they displayed a region-specific expression in the
developing human brain. Strikingly, sense unspliced RNAs of the P M C H L 1
gene comprised a novel open reading frame and they were found actually
translated in a coupled transcription/translation assay, after transfection of
tagged-variant protein vectors in COS cells and in the fetal and adult human
brains. Therefore, the variant MCH genes provide a unique example of a de
novo creation of a gene family in the Primate lineage with a differential
expression in the human brain, one gene copy encoding putative novel
proteins.
[1] Brosius and Gould, Proc. Natl. Acad. Sci. USA 89 (1992) 10706.
[2] Viale et al. Mol. Biol. Evol. 15 (1998) 196.
(Mo11.2/152)
"ITQB- UNL Apartado 127, 2780 Oetras, Portugal, o IGC, Apartado 14, 2780 Oeiras,
Portugal, ' Universi~ of Evora, 7000 Evora, Portugal
Desulfovibrio gigas is a sulphate reducing bacterium that is involved in
s206
(Mo/1.2/153)
Abstracts FEBS'99
(Mo/1.2/154) Sinescan: a program for the identification of tRNAderived retroposons in genomic sequences
R. Percudani, C. Mariano, S. Ottonello
Istituto di Scienze Biochimiche. Umversitgt dt Parma, 43100 Parma
(Mo/1.2/155)
New computer tools are needed for the analysis of the complex
genomes of multicellular organisms. Eukaryotic cells are habitats of a
wide variety of mobile elements that are preserved in DNA repetitive
sequences. Among them, tRNA-derived short interspersed elements
(SINEs) are especially common in higher eukaryotes These elements
have a composite structure with a 5' region homologous to a tRNA, a
tRNA-unrelated 3'-region, and flanking A/T-rich regions and direct
repeats. They transpose through an RNA-mediated mechanism and are
thought to play a pivotal role in genome evolution.
The identification of SINEs in DNA sequences presently relies
on the search of homology with known families described by
consensus sequences or Markov models. Such a strategy, however, is
too conservative and does not allow the detection of elements
belonging to as yet uncharacterized SINEs families. We have thus
exploited RNA polymerase internal promoters and the flanking
hallmarks of the retroposition event as shared motifs for the
identification of new elements in large genomic sequences. Cluster
analysis of all positive instances is utilized to obwate the high false
positive rate (ca. 10 per Mb) resulting from this procedure. In this
way, true positives are grouped in distinct families of sequence
homology while false positives are recognized and discarded as
orphan sequences. Our results indicate that the program is capable to
identify and correctly predict the boundaries of retroposons belonging
to novel SINE families.
(Mo/1.2/156)
Abstracts FEBS'99
(Mo/1.2/157)
(Mo/1.2/159)
A new phagemid vector for positive selection of recombinants based on a conditionally lethal barnase gene
S. Yazynin, H. Lange, T.Mokros, S.Deyev and H. Lemke
Biochemtsches Institut, Universitdtzu Kiel, Klel, Germany.
s207
(Mo/1.2/158)
(Mo/1.2/160)
s208
Abstracts FEBS'99
(Mo/5.2/162)
(Mo/5.2/163)
Yeast tRNA molecules with Guanosine at position 26 in the bend between the
D-stem and the anticodon stem is dimethylated by the enzyme
tRNA(m22G26)dimethyltransferase which is coded for by the single nuclear
TRM1 gene. The enzyme modifies nuclear as well as mitochondrial coded
tRNAs and is present in both organdies. Thus the enzyme has both a
mitochondrial and a nuclear targeting signal [1 ].
In Caenorhabditis elegans DNA we found homologies to Saccharomyces
cerevisiae TRM1 and the gene Ce Trml was cloned [2] and shown to code for
an enzyme that in vitro modifies position G26 of mutant SctRNAs that
specifically lack the G26 modification. It also modifies G26 in E. coil tRNAs
(which never has this modification) both in vitro and m vivo. When comparing
the Ce and the Sc wild type and mutant TRM1/Trml genes we find that they
share 39% identity in their amino acid sequence, that two positions in the Cterminal half is of crucial importance for activity, that the Ce C-terminal is
slightly extended compared to the one in the yeast protein and, remarkably, that
the Ce Trml gene seems to lack a sequence that could correspond to a
mitochondrial targeting signal in the modifying enzyme
The tRNA(m22G26)dimethyhransferase and/or its product m22G is known to
exist in many higher eukaryotes. In the data bank for human genomic DNA, a
sequences can be found that after elimination of introns could correspond to a
TRM1 gene, but then with a C-terminal region exceeding other Trml proteins
with about 100 amino acids. Comparisons between our clones of human cDNA
and of published genomic DNA point to several alternative C-terminal peptide
sequences, some of them with lengths more closely to the Ce enzyme. Data
from our cloning and characterisation of human and plant ScTRM1 homologues
and their gene products will be presented.
[1] Rose, A. M. et al.,Mol. Cell. Biol. 12, (1992) 5652; [2] Liu, J. et al., Gene,
226, (1999) 73.
(Mo/5.2/164)
Abstracts FEBS'99
(Mo/5.2/165)
s209
(Mo/5.2/166)
[1] B.C. Persson et al., Proc. Natl. Acad. Sci. USA, 89, (1992)
3995.
[2] C. Gustafsson et al., J. Biol. Chem. 268, (1993) 1326.
[3] J.T. Kealey et al., Biochemistry 30, (1991) 9724.
s210
Abstracts FEBS'99
(Mo/6.2/171)
The level of expression of the cfir gene, responsible for cystic fibrosis, is low
and appears to be, at least in part. dictated by the genomic sequences 5"
upstream of the translation start (ts) of c[?r. This promoter has the features of
a housekeeping gene. Moreover, about 1000 bp upstream of ts is a possible
enhancer region containing putative binding sites for API, SPI and NF-kB, but
the role they play in oqr transcription has not yet been considered. Since NFkB is a mediator of inflarmnation and inflammation is closely hnked to the
pathogenesis of cystic fibrosis, we investigated the possible involvement of
NF-kB in cT?rregulation. Computer analysis of the q[tr promoter revealed a
putative NF-KB element between posnions - 1103 to - 1093.
In a first series of experiments, we searched for the possible binding of NF-kB
on this sequence by performing electrophoret~c mobility shift and supershift
experiments using nuclear extracts from human colon carcinoma T84 cells,
which express a high level of @r, and from HeLa cells, and using the -1111/1090 region of the q[tr promoter as probe. When NF-kB was activated by
treating the cell with 10ng/ml of TNFm specific binding of NF-kB (RelA/p50)
to the probe was obseved. When the probe was enlarged by 14 bp (-l 111/1076), one additmnal DNA/protein complex was detected. To determine the
DNA sequences involved in the formation of this complex, we performed
methylation interference studies. The analysis revealed that the DNA binding
sequence for this protein(s) overlapped with the sequence of NF-kB and
contained the consensus binding site CANNTG (E-box) for basic-Helix-LoopHelix transcription factors. Electrophoretic mobility shift compctition
experiments supported this conclusion.
In a second series of experiments, the functional relevance of the -1111/1076 region was assessed in HeLa cells by using luc reporter gent
experiments. In basal and TNFc~-stimulated cells, a 2.5-fold activation of l l l l/-1076SV40-luc expression hiciferase was observed, suggesting that NF-kB
binding to DNA is not functional. Mutation of the E box dramatically reduced
the - 1111/- 1076SV40-luc expression in basal conditions and led to an increase
of hic activity in TNFc~-stimulated cells, suggesting that when the E-box
binding protein cannot form a complex with DNA, the NF-kB binding to DNA
shmulates transcription activity. Altogether, the results suggest that in the
region -1111-1076 of the cfir promoter, complex DNA/putative b-HLH
protein(s) in the vicinity of c/~r ~f3 element prevent NF-I,zB protcins binding.
These .proteins might be important for the regulation of CFTR gene
transcription.
Supported by INSERM, AFLM and CNRS.
(Mo/6.2/173)
p21WAF1/CIPI
Abstracts FEBS'99
(Mo/6.2/174)
s211
(Mo/6.2/175)
(Mo/6.2/177)
Molecular Organization of the RNA Polymerase II Initiation Complex : Role of Transcription Factor TF31A.
D. Forget*, A. Rojas*, M.-F. Langefier*, J. Greenblatt~ and
B. Coulombe*, *Biologic, U. de Sherbrooke, Sherbrooke (Qudbec)
J I K 2R1 Canada. # BBDMR, University of Toromo, Toronto, Canada
s212
(Mo/6.2/178)
Abstracts FEBS'99
(Mo/6.2/179)
(M0/6.2/180)
(Mo/6.2/181)
We have cloned and sequenced the cDNAs coding for three different
sigma70-type transcription factors from the higher plant Arabidopsis
thaliana. In order to analyse the degree of evolutionary conservation of
components of the transcriptional machinery we analysed whether these
plant sigma factors can complement E. coli r-poD (ts) mutants (rpoD285 and
rpoD800).
We analysed the entire plant sigma factors and also hybrid sigma factors,
being composed of domains originating either from plants or from E. coli.
Our analyses indicate that the N-terminal domains of plant sigma factors
seem to have aquired different functions during evolution. The C-terminal
domain of one out of the three plant factors analysed can fully substitute all
functions of the primary sigma factor of E. eoli indicating strong
evolutionary conservation of promoter structures and promoter/transcription
factor/RNA polymerase interactions.
Abstracts FEBS'99
(Mo/6.2/182)
s213
Accumulating evidence suggests that the free radical nitric oxide may play a
role in the control of transcription by modulating the DNA binding activity of
transcriptional activators The transcription factor activator protein-I (AP-1),
which is composed by homo- or heterodimers of Jun and Fos proteins, has
been proposed as one potential sensor of nitrosative stress at the level of
transcription. However, the molecular mechanisms underlying inhibition of
AP-1 DNA binding activity by reactive nitrogen species remain to be established Here, we show that in the presence of the physiological sulfhydryl
glutathione, nitric oxide modifies the two cysteine residues contained in the
DNA binding module of cJun in a selective and distinct way While nitric
oxide induced the formation of an intermolecular disulfide bridge between
cysteine residues in the teucine zipper domain of cJun monomers, this same
radical directed the covalent incorporation of stoichiometric amounts of glutathione to a single conserved cysteine residue in the DNA binding site of the
protein We found that covalent dimerization of cJun did not affect its DNA
binding activity, whereas the formation of a mixed disulfide with glutathione
correlated well with the inhibition of the transcription factor We show that
NO-induced S-glutathionylation of cJun is not mediated by NO-induced
oxidation of glutathione to glutathione disulfide but involves the generation of
S-nitrosoglutathione as reactive, thiol-transferring species. We provide evidence that the reaction of S-nitrosoglutathione with cJun to yield the mixed
disulfide does not require homolytic cleavage of the nitrosothiol but rather
involves a direct and reversible transfer of the glutathionyl moiety to the cJun
protein. Molecular modeling of S-glutathionylated cJun further indicates that
the incorporation of glutathione into the basic DNA binding domain of cJun
is facilitated by specific electrostatic interactions In conclusion, our results
support the inhibition of cJun by NO/nitrosothiol-induced S-glutathionylation
as a potential mechanism by which nitrosative stress may be transduced into a
functional response at the level of transcription
(Mo/6.2/lg4)
(Mo16.2/185)
s214
(Mo/6.2/186)
Abstracts FEBS'99
(Mo/6.2/187)
(Mo/6.2/188)
transcription
(Mo/6.2/189)
Abstracts FEBS'99
(Mo/6.2/190)
s215
(Mo/6.2/191)
IGBMC, 1 rue Laurent Fries, B.P. 163, 67404 lllkirch Cedex. France
(Mo/6.2/192)
receptor-depeadmtgema-anscri~L
(Mo/6.2/193)
s216
(Mo/6.2/194)
Abstracts FEBS'99
(Mo/6.2/195)
(Mo/6.2/196)
Telomeres, which are extremities of linear chromosomes, are essential for the
stability and the complete replication of eukaryotic chromosomes. They
consist of simple repeated sequences with a G-rich strand always in the 5' to 3'
orientation towards the chromosome terminus. In addition to telomere repeats
found at the end of chromosomes, more or less degenerated telomere
sequences are often observed at interstitial sites within the genome. These
sequences can be classified arbitrarily into two classes. The first class contains
many tandemly repeat telomeric motifs which are more or less degenerated.
These sequences are usually found in subtelomeric or pericentric regions but
also at distinct internal sites, sometimes clearly as relic of ancestral telomeretelomere fusions A second class is constituted by interstitial telomeric
sequences harbouring only one or few telomere motifs. Apart from the ciliate
Stylonychia lemnae and the plant Arabidopsis thaliana, this category of
sequences has not been extensively searched [1,2]. We have shown that most
of Arabidopsts genes encoding components of the translational apparatus
contains one or several telomeric motifs AAACCCTAA in their 5' region.
These motifs are involved in the activation of gene expression in cycling cells
of root primordia. In addition, south-western screening of an ArabMopsis LZAP II expression library with a double stranded (AAACCCT)4yielded
cloning of a gene encoding a protein related to the conserved Pumt nuclear
protein. The implications of these observations are discussed.
[1] Stoll et al., Nucl. Acids Res., 221, (1993) 1783
[2] Regad etal., J. Mol. Biol., 239, (1994) 163
(Mo/6.2/197)
FLI and ERG are tv, o members of the ETS transcription factor titmily. All
the members of this family share a highly conserved region termed the ETS
domain which is about 85 amino acids in size and mediates binding to a DNA
target harboring a central GGA core. Different ETS proteins bind similar, but
not identical, purine-rich sites on the regulatory regions of different genes. FLI
and ERG which belong to the same subset of ETS proteins share a 96 %
sequence identity in tile ETS domain as compared to an overall 67 % identity.
During embryogenesis in Xcnopus. expression of the Xlqli gene occurs
earlier than the expression of the Xl-erg gene and their expression patterns in
the developing embryo partially overlap, indicating redundant functions in
gene transcription regulation. We therefore addressed the question whether the
sequence differences in the ETS domains of XI-Fl,l and XI-ERG proteins may
determine subtle DNA binding specificities.
As a first step to identify target sequences for XI-FLI and XI-ERG. a
cyclic binding site selection technique was developed using a pool of
randomly synthesized oligonucleotides. The alignment of the cloned binding
sequences showed a very similar consensus site for both proteins,
AAACCGGA A/G Y/c. We will discuss here whether differences in the base
pairs that flank the consensus core sequence can modulate the DNA binding
specificity of XI-FLI and X1-ERG. or if accessory cellular protein(s) that bind
nearby in a cooperative fashion are required to achieve specific transcriptional
activation.
Abstracts FEBS'99
(Mo/6.2/198)
s217
s218
Abstracts FEBS'99
Degradation of Hypoxia Inducible Factor-I alpha (HIFlet) depends on the transcriptional activity of H1F-I
E. Berra, D.E. Richard, E. Gothi6, J. Pouyss6gur
(Mo/8.1/200)
Bovine whey hydrolysates have been developed and applied to areas such
Hypoxia Inducible Factor 1 is a key mediator of adaptative
responses to hypoxia. Recent evidence has demonstrated the
essential role played by the HIF-Ia subunit in HIF-1
activation. HIF-la is a short lived protein which is present at
very low levels in normoxic cells. Hypoxia rapidly increases
HIF-Ia protein levels by relaxing ubiquitin-proteasome
dependent degradation. In this study, we show that the rate of
HIF-la degradation upon reoxygenation of hypoxic cells
depends on the duration of hypoxic stress. More interestingly,
we demonstrate that degradation of HIF-Ia is suppressed by:
i) inhibiting general transcription with actinomycin D or ii)
specifically blocking HIF-l-dependent transcriptional activity
by the expression of a HIF-la dominant negative mutant. In
keeping with these findings, we postulate that HIF-Ia is
targetted to the proteasome via a HIF-Ia Proteasome
Targetting Factor (HPTF) which expression is directly under
the control of HIF-1 transcriptional activity.
(Mo/8.1/201)
(Mo/8.1/202)
Abstracts FEBS'99
(Mo/8.1/203)
s219
(Mo/8.1/204)
(Mo/8.1/205)
(Mo/8.1/206)
s220
(Mo/8.1/207)
Abstracts FEBS'99
(Mo/8.1/208)
(Mo/8.1/209)
(Mo/8.1/210)
, I'trts. 'It@ira[
contre
la
Abstracts FEBS'99
s221
9.2 Endocytosis
(Mo/9.2/211)
(Mo/9.2/213)
(Mo/9.2/212)
(Mo/9.2/214)
2 +
s222
(Mo/9.2/215)
Abstracts FEBS'99
Previous work has described the cell cycle phase-specific action of nerve
growth factor (NGF). In the pheochromocytoma cell line PC12, NGF ellicits
an anti-mitogenic effect, i.e. inhibition of the G1 to S transition, and provokes a
differentiation response in the GI phase, while a survival effect is stimulated
elsewhere in the cell cycle. The proto-oncogene c-fos is also induced in the
G1 phase of the cell cycle. These observations suggest that the infrastructure
necessary for signal transduction is different depending on the cell cycle
phase. Since signalling starts at the receptors, we have undertaken studies of
the expression and fate of the receptors for NGF, TrkA and p75NTR, in the
PC12 model. The results of experiments designed to evaluate the synthesis,
maturation and turnover of the receptors in the absence and presence of NGF
are presented.
This work was supported by grants from the "Association pour la
Recherche Contre le Cancer", the "Ligue National de Recherche Contre le
Cancer", the Rh6ne-Alpes Region, the Ministry of Research and Technology
and the European Union Biomed program.
(Mo/9.2/217)
(MoD.2/216)
(Mo/9.2/218)
Abstracts FEBS'99
(Mo/9.2J219)
s223
(Mo/9.2/220)
(Mo/9.2/221)
Small GTPases of the Rab family are known to play an essential role in
the regulation of vesicular transport and membrane traffic. Rab proteins
cycle between an active (GYP-bound) and an inactive (GDP-bound) form.
The GTP/GDP exchange and then the state of activation of Rab proteins
are determined by a number of factors. Among Rab proteins, Rab4 is
involved in the recycling of membrane material back to the plasma
membrane from endosomal compartments. Specifically, Rab4 plays a role
in insulin-mediated translocation of glucose transporters in adipocytes and
on the pathway of receptor-mediated antigen processing in B cells. We
used the yeast two-hybrid system to search for proteins interacting with a
constitutively active form of Rab4 (GYP-bound). The complete protein
sequence corresponding to a positive clone was obtained using RACEPCR and mouse fat cell eDNA library screening approaches. The presence
in the polypeptide sequence of three SH3 domains, two proline-rich
regions and a coiled-coil domain suggests a possible role in protein-protein
interactions. Using the yeast two-hybrid system, this protein was found
to interact specifically with GYP-bound active forms of Rab4, as Rab4
Q67L. even when they lack the geranylgeranylation site and thus do not
anchor to membranes (Rab4 Q67I.ACT and Rab4 Q67LA10CT). No
interaction was observed with wild type Rab4 or with mutated forms not
able to bind GYP (Rab4 $22N and Rab4 N121I). This protein was likely
to be a Rab4 effector, and was named Rabef4. Confocal fluorescent
microscopy showed the apparition of a fine punctate staining pattern in
CHO cells transfected with either Rab4 or Rabef4. Following
cotransfection, both proteins exhibited large colocalization and the stained
structures were enlarged compared to those observed with any of the two
proteins alone, suggesting a rearrangement of the subcellular compartments
containing both Rab4 and Rabef4 in the cotransfected cells.
Supported by APEX 97-01 (INSERM) and JDFI 198302
(M0/9.2/222)
s224
Abstracts FEBS'99
(Mo/14.2/224)
(Mo/14.2/225)
Several subclasses can be defined in the family of the ATP Binding Cassette
(ABC) transporters on the basis of a number of structural criteria, e.g. the
number of subunits required to assemble a functional molecule, the topology
and number of the transmemhrane spanners and the presence of extra domains.
In this context, ABC1 defines a structural subclass since it possesses a putative
regulatory domain reminiscent of the R domain of CFTR, but split here into
two halves by a stretch of highly hydrophobic amino acids. This peculiarity is
shared by three recently identified mammalian ABC transporters (ABC2, ABC3
and ABCR) and by the Caenorhabditis elegans gene ced-7. It is worth noting,
that none of the 29 ABC transporters present in yeast shows these features.
We report here the identification and characterization of an additional ABC1like gene, ABC4, which is located on mouse chromosome 10B4-CI. This gene
shows an exon-intron organization perfectly mirroring that of ABC1, ABC2
and ABCR and encodes a transporter more than 50 % identical to the other
members of the subfamily.
A comparative analysis of the expression patterns of the ABC l-like transporters
shows that, in spite of an ubiquitous low level transcription, they have distinct
and non-redundant preferential areas of expression. For instance, out of a panel
of adult mouse tissues, ABC1 is preferentially expressed the pregnant uterus,
ABC2 in the brain, ABC3 in the lung, ABCR in the retina and ABC4 in the
spleen.
A comparative analysis of these highly related sequences allowed to highlight
specific motifs conserved throughout the ABCl-like family and absent from
other mammalian ABC transporters. In addition when extended to the domain
structure this analysis evidenced an extremely high conservation of discrete
transmembrane spanners, possibly correlated to a basic functional constraint as
opposed to the very low conservation for instance of the regulatory domain,
likely thus to reflect specific functional diversification.
The presence of highly conserved diagnostic motifs at fixed positions together
with the extreme conservation of the exon-intron organization allowed us to set
up a PCR based- extensive search for novel genes belonging to the ABCl-like
family. Preliminary results indicate that at least three other putative novel
members are yet to be identified.
(Mo/14.2/226)
Abstracts FEBS'99
(Mo/14.2/227)
s225
(Mo/14.2/228)
(Mo/14.2/229)
(Mo/14.2/230)
s226
(Mo/14.2/231)
Abstracts FEBS'99
C h a r a c t e r i z a t i o n o f a Sinorhizobium meliloti A B C - h i s t i d i n e
t r a n s p o r t e r also i n v o l v e d in b e t a i n e s a n d p r o l i n e u p t a k e
(Mo/14.2/232)
(Mo/14.2/233)
P-I~lycoprotein
pharmacology
i m p o r t a n c e a n d r o l e in t h e c e l l u l a r
of anthracyclines
in C a C o 2 cells.
' de abtochtmte
. . .' cellulatre,
de bbtologte
.
. celhdatre,
.
Laboratotres
UniversitF cathohque de Lota,ain,
PI. Louts Pasteur, I, B-1348 Louvmn-la-Neuve, Belgium.
Multidrug resistance in tumor cells reduce the toxicity but also the
pharmacological activity of different antineoplastic drugs (anthracyclines,
vinca alcalo'/ds, ...) by an energy-dependent active effiux mechanism mediated
by the mdrl gene product, the P-glycoprotein (P-gp). We investigated the role
and importance of P-gp in the cellular pharmacology of anthracyclines by
using monolayers of CaCo 2 cells, deriving from a human colon
adenocarcinoma. Grown and differentiated on microporous substrates, these
cells express P-gp at their brush-border membrane (apical pole).
CaCo 2 cells transport daunorubicin (DNR), doxorubicin (DOX), idarubicin
(IDA) and various amino acid derivatives preferentially from the BL pole than
from the AP pole. DNR, IDA and various amino acid derivatives are more
accumulated than DOX. Cell fractionation and laser scanning confocal
microscopy indicate that the subcellular distribution of these compounds is
very different. DNR DOX and IDA accumulate in the nuclei whereas the
amino acid derivatives, which have a lower affinity for DNA, show a vesicular
and cytoplasmic localization. In the presence of verapamil, a P-gp inhibitor,
the net transport of the anthracyclines from the BL pole to the AP pole is
inhibited and the cellular accumulation of these compounds from both poles is
increased. In contrast, verapamil unaffects the accumulation of IDA. HPLC
separation and fluorescence detection indicate that DOX is not metabolized in
CaCo 2 cells whereas the other anthracyclines are biotransformed into the "o1" form, which is produced by cytoplasmic aldo-keto reductases. Part of
these metabolites is expulsed preferentially to the AP pole of the cells. This
transport is inhibited in the presence of verapamil, which suggests that the
metabolites are also substrates of the P-gp.
These results indicate that CaCo 2 cells provide an interesting tool to
investigate transport, accumulation and biotransformation of anthracyclines in
polarized epithelia and confirm that P-gp plays a crucial role in the
bioavailability of drugs in gastrointestinal tract.
(Mo/14.2/234)
M D R m o d u l a t i o n by N - b e n z y l p i p e r a z i n e - f l a v o n o i d s .
R o l e o f the p r o t o n a t e d form.
Abstracts FEBS'99
(Mo/14.2/235)
s227
(Mo/14.2/236)
The ABC super-famdy is probably the largest family of proteins that medmte ATPdependent transfer of solutes In plants, only a few ABC proteins have been recently
idenufied. The funcUonal charactenzatton obtained for some of them suggests their
involvement in the cellular detoxification of xenobiotics or in the regulation of cell
elongation If the vast majority of ABC proteins in animal cells are active
transporters, it has emerged that another fundamental role of these proteins Is their
involvement in so far as ion channels [1] Our group is mterested by the
identification of plant ABC proteins and by interactions that could occurred wtth
plant ion channels (http://xs'~vw-dsv.cea ff/gtso/gtso_us htm).
Stomata, located in the epidermal leaf are formed by a couple of guard cells and
control gas exchange between the plant and the atmosphere Incubauon of epidermal
strips in the presence of glibenclamlde induced stomatal opening in darkness
Conversely. stomata previously open in light, are closed by potassmm channel
openers. Apphcation of the whole-cell patch-clamp technique on guard cell
protoplasts demonstrates that glibenclamide inhibits the outxsard-potassium channel
In northern blots, a 7 kb transcript was revealed when total RNA from guard cells
were hybridized w~th an EST tdenttfied as an encoding sequence homologue to SUR
Thin confirms that a transcript encoding a sulfonylurea-receptor-like protein is
present in guard cells and that this protein is able to control, directly or not, the
actwlty of the plasma membrane outward potasstum channel [21 Using the same
EST, we cloned AtMRP2, a cDNA encoding a putative ABC transporter from
Arabidops~s [3] but different from the SUR expected AtMRP2 ~s now charactertzed
as a transporter involved m the detoxification of xenobiotics and we are currentl3
investigating its role m the control of ion channels using Xcnopus heterologous
expression Moreover. we observed that glibenclamlde strongly affect anion
channels and the stomatal closure induced by the phytohormone ABA Elements
concerning a more detailed Identification of this receptor, tts interaction with ton
channels and with the ABA-slgnaling cascade will be presented at the meeting
[1] Fliggins CF (1995) Cell. 82:693
[2] Leonhardt Net aI., (1997) Proc Natl. Acad. Scl USA, 94 14156
[3] Mann E et al. (1998) Btochim Blophys Acta. 1369 7
(Mo/14.2/237)
(Mo/14.2/238)
s228
(Mo/14.2/239)
Abstracts FEBS'99
(Mo/14.2/240)
(Mo/14.2/242)
Cadmium resistance in Staphylococcus aureus is mediated via the plasmidcoded, energy-dependent Cd 2+ efflux system identified as a P type Cd2+ATPase This membrane-bound system extruds Cd2+ from the cytoplasm of the
resistant cells immediately after its entry via the Mn2+ transport system [ 1,2]
According to our preliminary data, the cadmium effiux system may require not
only ATP needed for conformational changes but also electrochemical proton
gradient (A~H+) essential for Cd2+/nH+ exchange during Cd2+ extrusion
In this work we assayed the effect of 5 mM Mg 2+ on l9Cd efflux in the
resting cells of cadmium-resistant S. auretts 1781OR. Cells were preloaded with
10 ~tM lgCd under special experimental conditions (1 mM phosphate buffer,
pH 7 plus nigericin) Steady-state or net efflux of 109Cd was initiated by
addition of 100 mM PB and cadmium-insensitive L-lactate as an energy donor.
Effiux experiments were performed using the filtration method
It was shown that Mg 2+ protected the cells against 109Cd preloading. Mg 2+
accelerated also the initial rate of steady-state l9Cd effiux with an increase in
the resultant rate constant (k) from 0 06 to 0 092 rain-1. In contrast, Mg 2+ had
no effect on the fast initial rate of net 109Cd efflux and the resultant rate
constants (k), being 0.095 min-1 in the presence or in the absence of Mg2+
According to our earlier data [1], Mg2+ did not affect Cd2+ entry via the
Mn2+ transport system. It is suggested that Mg 2+, having a high affinity to the
negatively charged groups on the surface of biological membranes (surface
potentials) may protect the cadmium efflux system against binding of external
Cd2+, thereby preventing Cd2+ preloading of the cells and accelerating the
steady-state Cd 2+ effiux but not the net Cd2+ effiux
This work was supported by grant 6 P04C 020 13 from the State Committee
for Scientific Research
[1] Tynecka Z, Gos Z, Zaja~c J, J Bacteriol. 147 (1981), 305
[2] Tynecka Z, Gog Z, Zaja~e J, J Bacteriol. 147 (1981), 313
Abstracts FEBS'99
(Mo/14.2/243)
Investigation o f A T P . s e n s i t i v e K - c h a n n e l s
u s i n g a baeulovirus e x p r e s s i o n s y s t e m
M.V. Mikhailov, S.J.H. Asheroft
s229
(Mo/14.2/244)
In this study, we have investigated the frequency of TAP1 and TAP2 alleles
in a group of 236 persons, previously HLA DQAI, DQB1 and DRBI
genotyped by us [1], constituted by 70 insulin-dependent diabete mellitus
(IDDM) patients and most of their first degree relatives (i. e., 156 parents and
full sibling subjects) living in Reunion island.
Population of this island is constituted by a particular structure of highly
crossbreeding individuals of African ancestry (35%), Indian origin (20-30%),
French origin (30%) and Chinese background (5%).
TAP typing was performed by polymerase chain reaction (PCR) amplification
refractory mutation system (ARMS). Seven among the eight TAP2 alleles
previously described in human patrimony were observed in control and
IDDM populations. Interestingly, the new TAP2 G allele, previously
discovered by us in Reunion island [21, was found to be increased in IDDM
population and the calculated HRR was shown to be relatively high (3.3).
This susceptibility to IDDM seems to be due to a positive linkage
disequilibrium between TAP2G allele and the highly diabetogenous DQA1
0501/DQB1 0201/DRB1 0301 haplotype (HRR=9). These data suggest that
TAP2G is not an additional predisposition factor of IDDM but its relativeIy
high frequency in 1DDM population allows to consider this allele as a genetic
marker of IDDM.
In addition, we show that minority alleles (TAP2D, E, F. G) are associated
with a restricted number of HLA class I1 haplotypes and each of them exhibit
a preferential linkage with one particular haplotype.
Finally, in contrast to other alleles and despite a HRR value close to 1, we
show that TAP2E allele contributes significantly to a drastic reduction of the
diabetogenic effect of DQA1 0301.2/DQBI 201/DRB7 haplotype. Indeed,
this haplotype which is usually preferentially transmitted to affected children.
is dominantly transmitted to healthy children when it is associated to TAP2E.
Therefore this allele seems to contribute to genetic protection to IDDM.
[11 Feugeaset al. Ettr J lmmunogen.. 23, (1996),459.
[2] CesariM., et al.. hnmunogenetlc,. 45. (I 997), 280
(Mo/14.2/245)
(Mo/14.2/246)
s230
(Mo/14.2/247)
Abstracts FEBS'99
(Mo/14.2/248)
(M0/14.2/249)
(Mo/14.2/250)
Camitine plays essential roles for fatty acid metabolism and its
deficiency leads to the critical symptom, systemic camitine deficiency
(SCD). Large part of camitine in urine is reabsorbed by the active
transporter(s) to maintain physiological carnitine concentration and its
distribution into various tissues is also mediated by specific transporters.
In the present study, we identified novel Na*-dependent camitine
transporter family, OCTN and examined its relevance to SCD [1-3].
Furthermore, we studied multifunctionality of OCTNs by examining
substrate specificity of them.
Human OCTN1 and 2 were cloned from fetal liver and adult kidney
eDNA libraries, respectively. Counterparts of OCTNs in mouse were
isolated by similarity to human OCTNs. These cDNAs were constructed in
expression vector, pcDNA3 and transport function was examined by
transfecting them in HEK293 cells.
When hOCTN1 or 2 from human was transfected in HEK293 cells, Na*dependent carnitine uptake was induced. The obtained Km values were 4.6
and 4.3 ~M for hOCTN1 and 2, respectively, suggested that both of them
are classified as high affinity carnitine transporters. Especially, high
camitine uptake activity was observed by hOCTN2. In mice, three
members that show functional similarities with hOCTNs were identified.
mOCTN2 had Na-dependent and high carnitine transport activity. The
j v s mouse, isolated from the C3H.OH strain, genetically exhibits a
phenotype of SCD and low serum concentration of carnitine. In mOCTN2
gene o f j v s mouse, single nucleotide transition was found, which leads to
substitution of Leu at codon 352 by Arg. When functionally analyzed, the
mutant mOCTN2 did not show any carnitine transport activity, while
expression of the protein was confirmed by Western blot analysis.
Accordingly, OCTN2 was clarified as a physiologically important eamitine
transporter.
Interestingly, some members of OCTNs showed Na+independent transport of organic cations such as tetraethylammohium,
suggesting that they facilitate renal excretion of cationic compounds,
presumably at the renal apical membrane. Accordingly, OCTNs may have
multiple functions by contributing to active secretion of cationic
xenobiotics into urine as well as to reabsorption of physiologically essential
nutrient carnitine with distinct mechanisms.
[1] Tamal et al. F E B S Lett. 419 (1997) 107. [2] Tamal et al. J. BioL Chem.
273 (1998) 20378. [3] Nezu et al. Nature Gen. 21 (1999) 91.
Abstracts FEBS'99
(M0114.2/231)
s231
aureus
(Mo/14.2/233)
(Mo/14.2/232)
Kawaguchl,
and
s232
Abstracts FEBS'99
(Mo11.3/255)
(Moll .3/256)
(Mo/1.3/257)
Abstracts FEBS'99
(Mo/1.3/258)
s233
(Mo/1.3/259)
Lipofectin, which is the mixture of a neutral lipid with a cationic lipid has
been widely used to enhance cellular delivery of phosphorothioate. 2'sugar modified and chimeric antisense oligonueleotides. Phosphodiester
oligonucleotides delivered with Lipofectin usually do not elicit antisense
activity probably because cationic lipid formulations do not sufficiently
protect unmodified oligonucleotides from nuclease degradation. We show
that a cationic polymer, polyethylenimine (PE[), improves the uptake and
antisense activity, of T-capped 20-mer and 12-mer antisense
phosphodiester oligonucleotides (PO-ODN) targeted to different regions
of Ha-ras mRNA and to 3"-untranslated region of C-raf kinase, in
contrast, PEI which forms very stable complex with the 20-mer
phosphorothioate oligonucleotide (PS-ODN) do not enhance its antisense
activity. Using fluorescently labeled carriers and oligonucleotides, we
show that PS-ODN-PE1 particles are very efficiently taken up by cells but
PS-ODN is not dissociated from the carrier. Our results indicate that
carrier/ODN particle size, stability, ODN release kinetics varies with the
chemical nature of the oligonucleotide and the carrier being transfected
into the cells. The very, low cost of the PE1 compared to cytofectins, the
increased affinity for targeted mRNA and decreased affinity for proteins
of PO-ODNs compared to PS-ODNs make the use of PEI/PO-ODNs at
least in adhcrant cells very attractive.
(Mo/1.3/260)
(Mo/1.3/261)
Some DNA and RNA sequences form unusually stable hairpin structures.
The DNA fragment d(GCGAAGC) forms an extraordinary stable DNA
mini-hairpin with regard to thermal denaturation, nuclease degradation and
denaturing electrophomsis conditions [I ]. It is stabilized through only two
G-C base pairs and a non Watson-Crick G-A pair. Its high resistance
against nucleases makes it useful in antisense strategy because unmodified
oligodeoxynucleotides (ODN) are rapidly degraded both in serum and cells,
primarily by 3'-exonucleases. We have already shown that attachment of
the d(GCGAAGC) hairpin structure on the T-end of a 12mer does not
hinder hybridization to a complementary DNA strand [21. Moreover, the
hairpin is by now in equilibrium between a folded and an owned structure,
with an energy minimum in favor of pairing if it is possible, even with
mismatches.
The opposition between the stability of the hairpin alone and its fast
hybridization when possible is emphasized in the present work. (i) The
kinetics of exchange of the amino groups protons of the hairpin has been
studied by resonance Raman spectroscopy by passing from a H 2 0 to a
D 2 0 medium. A tl/2 of the order of 10 days has been found. (ii) FRET
(fluorescence resonance energy transfer) allowed the mechanism of ODN
hybridization/opening of the hairpin to be studied. In that purpose, (1) an
ODN protected by the hairpin on its T-side has been labeled on the same
side with fluomscein whereas its complementary ODN has been labeled on
its 5'-side with rhodamine, (2) a single ODN protected by the hairpin Js
labeled with rhodamlne on its 5'-side and with fluorescein on its 3'-end.
Since the fluorescence spectrum of fluorescein overlaps with the
absorbance spectrum of rhodamine, the excitation of fluorescein induces
fluorescence of rhodamine while its own fluorescence decreases : this
process is called FRET. The enhancement of FRET (casel) or its decrease
(case 2) allowed times of the order of seconds or minutes to be determined.
[11 Yoshizawa et al., Nucleic Acids Res., 22, (1994) 2217.
[2] Jolles et al., Nucleic Acids Res., 25. (1997) 4608.
s234
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(Mo/1.3/265)
Abstracts FEBS'99
(Mo/1.3/266)
s235
(Mo/1.3/267)
(Mo/1.3/268)
in p44
MAP
(a)Cemre de Btochunie. UMR CNRS 6543, ,arc Vah'ose. 06094 Nice France.(b)Faculd' ~
Medecme, CJF INSERM 96 05. Avenue de Vallombtvse, 06107 Nice France. (c)Center [or
genome resealvh, King '~ Building. West Mares Road. Edimburgh . Scotland
The p42 and p44 MAP Kinases (erk2 /erkl) signaling pathway has been
implicated in proliferation as well as in differentiation programs. To
understand the specific role of the commonly expressed and activated
isoforms p42 and p44 MAP Kinase (erk2 and erkl) in the whole animal, we
generated erkl deficient mice through homologous recombination in
embryonic stem cells. Erkl KO mice are viable, fertile and apparently
indistinguishable from wild type mice. this first result indicates that erkl is
dispensible and that the second isoform erk2 can compensate the loss of erkl.
However a closer analysis oferkl -/- mice shows that thymocytes maturation
beyond the CD4 +/CD8 + stage is reduced by half with a similar diminution
in the TcR high thymocytes subpopulation. We also observed a severe
reduction in thymocytes proliferation following activation with an anti-TcR
monoclonal antibody in the presence ofphorbol myristate acetate even if erk2
activity is not affected in these cells. Our result demonstrate that apparently
redundant kinases could play specific role in highly differentiated tissues and
also point out the specific role of erkl in thymocyte maturation and
proliferation.
s236
(Mo/1.3/270)
Abstracts FEBS'99
Antitumoral vaccination by suicide gene therapy. V. PierrefiteCarleI, P. Baqu62,A. Gavelli3, M. Mala2, M. Chazal2, A Bourgeon2,
(Mo/1.3/271)
(Mo/1.3/272)
(Mo/1.3/273)
Abstracts FEBS'99
s237
(Mo/3.1/275)
(Mo13.1/277)
s238
Abstracts FEBS'99
(M0/3.1/278)
(Mo/3.1/279)
(Mo/3.1/280)
Growth of non-transformed ceils is regulated in vitro and in vivo by cellcell interactions. In vitro, cells are arrested in Gl-phase when they have
reached confluency (contact-inhibition of growth) which is reflected by
decreased phosphorylation of the retinoblastoma gene product (pRB), the
gate keeper of G1/S transition. We have previously shown that in human
diploid fibroblasts (FHI09 cells) the tumorsuppressor p16 and the cdkinhibitory protein p27 are involved in contact-dependent inhibition of
growth resulting in reduced kinase activities of cdk4 and cdk2,
respectively, and thus decreased pRB phosphorylation [1,2]. In order to
elucidate further the signal transduction pathway we addressed the
question if protein kinase C is involved in contact-dependent inhibition
of growth. There is evidence that PKC is not only involved in mitogenic
processes but also in negative growth control and differentiation. Cellcell contacts were imitated by the addition of glutaraldehyde-fixed cells
[3]. Down-regulation of protein kinase C by preincubation with TPA
(100 nM) for 48 h leads to decreased contact-inhibition by 37 % whereas
the inactive isomer 4~x-phorbol-didecanoate does not reduce contactinhibition significantly. Western blot analysis revealed that only the two
isoforrns ~t and 6 are down-regulated in response to TPA-pretreatment.
In the presence of Rottlerin (I p,M), a specific inhibitor of PKC &
contact-inhibition is totally abolished. In contrast, the a-specific inhibitor
G66976 (100nM) does not affect contact-inhibition. The results indicate
that PKC 6 which has recently been considered to be a tumor suppressor
might be involved in contact-dependent inhibition of growth in FH109
cells.
1. Dietrich et al., Oncogene, 15 (1997), 2743
2. Wieser et al., Oncogene, 18 (1999), 277
3. Wieser et al., J Cell Biol, 103 (1986), 361
(Mo/3.1/281)
Abstracts FEBS'99
(Mo/3.1/282)
s239
(Mo/3.1/283)
(Mo/3.1/284)
(Mo/3.1/285)
s240
(Mo/3.1/286)
Abstracts FEBS'99
(Mo/3.1/288)
(Mo/3.1/289)
Abstracts FEBS'99
(Mo/3.1/290)
s241
Most eukaryotic ceils respond to both DNA damage and S-phase replication
blocks by arresting cell cycle progression. We are using S pombe as a
model system to identify and order the various components of the DNA
structure-dependent checkpoint pathways. The Chkl protein kinase is
phosphorylated "after DNA damage and is essential for the mitotic arrest
checkpoint. During S-phase, a second protein kinase Cdsl is activated in
response to DNA damage and DNA replication blocks. The response of both
Chkl and Cdsl requires the six "checkpoint Rad" proteins. Cdsl is not
activated in response to DNA damage in non-S-phase cells. We demonstrate
that the phosphorylation of the Chkl protein kinase in response to DNA
damage is cell cycle specific, occurring primarily in late S-phase and G2,
but not during Gl/early S-phase or mitosis. To understand the significance
of the cell cycle specificity of checkpoint responses, we isolated an allele of
tad3 that is temperature-sensitive for function. The Rad3 kinase is essential
for all DNA structure-dependent checkpoints. Characterisation of the rad3ts
allele showed that in response to DNA damage, rad3 is primarily required to
initiate the Chkl dependent mitotic arrest checkpoint, but is not required to
maintain the arrest. Conversely, rad3 is required to both initiate and
maintain mitotic arrest when DNA replication is inhibited. We see a strong
genetic interaction between rad3 and cdsl and biochemical evidence
suggests a physical interaction between Rad3 and Chkl and between Rad3
and Cdsl protein kinases. In order to isolate new genes involved in the DNA
replication checkpoint response a multi-copy suppressor screen of HU
sensitivity of the rad3ts at the semi-permissive temperature was performed,
the results of which wilt be presented.
(Mo/3.1/292)
(Mo/3.1/291)
(Mo/3.1/293)
s242
(Mo/3.1/294)
Abstracts FEBS'99
Abstracts
FEBS'99
s243
(Mo/5.3/296)
V.Vlassov
(Mo/5.31297)
The most successful strategy for the selection of new RNA catalysts is direct
selection, which was, however, limited to self-modifying reactions of RNA
until recently [1 ]. To expand this strategy to bimolecular reactions of small
reactants, we have developed direct selection with linkcr-coupled reactants.
We have applied this technology to the catalysis of the Diels-Aldcr reaction
of anthracene and maleimide. Our strategy involved generating a
randomized pool of RNA conjugates, in which anthracene is attached to the
individual pool molecules via a poly(ethylene glycol) (PEG) tether [2]. This
pool was then incubated with biotinylated maleimide to select RNA
molecules that catalyze C-C bond formation between the two reactants. The
newly formed biotinylated Diels-Alder product would then be covalently
attached to the RNA via the linker. After removal of all non-biotinylated
members of the pool by affinity chromatography, active RNA molecules
were amplified and used in iterative selection cycles.
After 10 rounds of selection, the activity of the enriched pool was increased
by four orders of magnitude. After cloning and sequencing. 35 different
RNA species were found that catalyzed the Diels-Alder reaction. Secondary
structure analysis identified a common 38 nucleotide long RNA motif with
only 11 conserved nucleotides. This motif accelerates as a true catalyst the
reaction of a small anthracene-oligonucleotide substrate with biotin
maleimidc about 20.000-fold [3].
We have identified a small RNA motif that can solve the complex task of
tbrming two C-C bonds between substrates that are not templated by basepairing. This is the smallest and fastest RNA-catalyst for carbon-carbon
bond formation reported to date. The catalytic activity described here
reveals the potential of ribozymes for performing chemical transformations,
which is not only essential for recreating prebiotic reaction pathways but
also for the application of RNA catalysts in bioorganic synthesis.
I.
2.
3
3.
(1993).
(Mo/5.3/298)
NH
I--o :~ o
[Rp]
-J-
Methanephosphonamidate linkage
Thermal stability of all duplexes is lower than that of the umodified ones, and
strongly depends on the type and number of introduced intemucleotide bond
modifications However, oligo(deoxyribonucleoside methanephosphonamidate)s
with incorporated [Rv] dinucleoside unit exhibit higher ability for triplex
formation with d(A21C4T20 hairpin oligomer than ones originated from [Sv]
counterpart as well as the parent T20 oligonucleotide. Triplex ~ hairpin
transition is a salt dependent process. We are able to demonstrate higher triplex
stability if ammonium chloride is used instead of sodium chloride. Triplex
formation was confirmed independently by lowering of 220 nm CD absorption
and the presence of slowly migrating bands at native PAGE.
[1] Nawrot B. et al N u c l e i c A c M s R e s 1998, 26, 2650.
s244
Abstracts FEBS'99
(Mo/5.3/300)
The enzymatic p~otein was purified from human colon c~rcinomz T84
cells and was free of other R.Nase activities as was shown by
SDSlpc~yacn/lamide-gel electrophoresis, activity staining, and mapping of
RNase Tg4 cleavage positions |I] This endon~lcleasehas a molecular
weight of 19 kDz and catalyses the cleavage of tKNAs in a dinucl~tidespecificmanner, KNas "I"84 reeo~zes 5'PupU3' sups and atalys~s thehydrolysis of the phosphodiester bonds at the Y side of A or G, and the $'
side of U yielding YA(OH) or G(O[-D and 5' pU terminated products. The
yeast tKNA'~' and yeast tRNAv'* substrales used in our experiments to
establish the sequence speczficity of KNase T84 have clearly established
secondary and terlia~ structure, which therefore ecabled us to study the
structural preference of RNase T84 The Rl~ase T84 bydrolyzed both
single and double-stranded regions of tRNA, hut its activity was facilitated
(Mo/5.3/301)
(Mo/5.3/302)
Abstracts FEBS'99
(Mo/$.3/303)
s245
s246
Abstracts FEBS'99
(Mo/8.2/305)
(Mo/8.2/306)
The ibpA and ibpB genes code for the two small heat shock proteins,
IbpA and IbpB. These proteins were described as capable of recognising
endogenous proteins aggregated intracellularly by heat shock [1] and
inclusion bodies of heterologous proteins [2]. The ibpA and ibpB genes form
the operon regulated by the rpoH gene product, o 32 protein. The presence
of the active, o 32 dependent promoter upstream of the first operon gene ibpA, was documented [2,3]. However, our results indicated that some
unidentified factors also participate in the ibpAibpB operon regulation.
Surprisingly, we have found that the IbpA and IbpB protein level was higher
in the rpoHl5 and rpoH165 strains (which are unable to induce the heatshock response) than in wild type and rose after heat shock [ 1]. Induction of
the other heat shock genes, dnaK and dnaJwas blocked as expected, in these
conditions. No IbpA/B protein production was observed in the ArpoH strain.
We examined transciption products ofibpAibpB operon by Northern
blotting using specific ibpA probe and by primer extension. In both, wild type
and rpoH15 strains subjected to heat shock, we found two transcripts
identified as ibpAibpB mRNA and ibpA mRNA which begin at that same
transcription start point. In ArpoH strain no transcripts was observed. These
results suggest different interactions of the o32-RNA-polymerase
holoenzyme with the cr32-dependent promoter upstream of the ibpAibpB
~l~eron than those with the known heat shock promoters recognisable by o
z. Supposedly, unknown factor was needed in the case of interaction with
this promoter. If so, binding o f o 32 changed by mutation, together with this
factor might be sufficient for the transcription initiation. However, there was
no transcription in the total absence o f o 32 in the ArpoH mutant.
1. Laskowska E., Wawrzyntw A., Taylor A., Biochimie 78 (1996): 117
2. Allen SP., Polazzi JO., Gierse JK, Easton AM., JBacteriol. 174
(1992):6938
3. Chuang SE., Burland V., Plunkett GIII. Daniels D.L., Blattner F.R, Gene,
134(1993):1
(M0/8.2/307)
Abstracts FEBS'99
(Mo/8.2/308)
s247
(Morn.2/309)
(Mo18.21310)
One of the most striking differences between the two subfamilies ofpapain-like
cysteine proteases, cathepsin L- and B-like endopeptidases is the extended proregion of the L-like subfamily, exceeding the length of the corresponding B-like
structure by about one third. Common structural motifs in the proregions of
both subfamilies were detected by X-ray crystallography of the proenzymes.
The C-terminal part spans the active site cleft. The adjacent strand-turn-helix
hairpin anchors to the propeptide binding loop of the mature enzyme. Only in
the L-like subfamily, the N-terminus folds to a mini-domain harboring some
highly conserved amino acids [l]. To elucidate the function of this structural
specificity of the L-like subfamily we studied the consequences of Ala exchange of some of the most conserved amino acids in the prodomain of cathepsin S.
Based on i) far UV-CD measurements of recombinant propeptide mutants,
ii) Trp fluorescence studies, and iii) the loss of the mutants inhibitory capacity
to the parent enzyme we ranked the individual contribution often conserved
amino acids to the structural stability of the prodomain at pH 6.5. We concluded
from CD spectra that secondary structure is not considerably affected by all mutations, whereas Trp fluorescence shift measurements revealed that the ternary
structure depends on the conservation of three interdigitating Trp residues in the
core region of the prodomaln. Regarding the inhibition kinetics towards cathepsin S, the propeptide mutants with molten cores show i) Ki-values about two
orders of magnitude higher than the Ki's of the other mutants and ii) a two step
reaction (E + I ~ EI <--->EI*). The initial low affinity binding step is followed
by a slow one, saturable with increasing concentration of the mutant propeptide,
indicating that these mutants undergo enzyme induced conformationaI changes.
Considering i) the reciprocity of such interactions between protein domains,
ii) the cotranslational domain folding, i.e. the prodomain establishes first,
m) the failure of all folding attempts with proregion truncated L-like cathepsins
in-vivo and m-vitro, and iv) successful refolding of proregion truncated cathepsin B, these results strongly suggest that the chaperon function may be a special
one of the prodomain of the cathepsin L like proteases.
[1] Coulombe, R. et aI., EMBO J. I5 (1996) 5492
S u p p o r t e d by D F G Wi 1102/1-4
The interaction of the endoplasmic reticulum chaperone, calnexin, with Nglycosylation mutants of a polytopic membrane glycoprotein, the human
erythrocyte anion exchanger (AEI, Band 3), was characterized by cell-free
translation followed by immunoprecipitation using anti-calnexin antibodies. AE1
contains 12-14 transmembrane segments and has a single site of N-glycosylation
at Asn642 in the 4th extracytosolic loop (EC4). This site was mutated (N642D)
to create a non-glycosylated protein. Calnexin showed a preferential interaction
with N-glycosylated AEI relative to non-glycosylated AE1, both in cell-free
system and in transiently transfected HEK293 cells. This interaction was blocked
by inhibition of glucosidases I and II with castanospermine. Caknexin had access
to novel N-glycosylated sites created in other EC loops in AEI by site-directed or
insertional mutagenesis and the interaction with AEI was enhanced when multiple
sites were introduced into the same loop or into two different loops. An
association of calnexin with truncated versions of N-glycosylated AEI was
detected after release ofthe nascent chains from ribosomes with puromycin. The
results show that the interaction of calnexin with the polytopic membrane
glycoprotein AEI was dependent on the presence hut not the location of the
oligosaccharide. Furthermore, calnexin was associated with AE1 after its release
from the translocation machinery. The interaction of calnexin with AE1 may
assist in the post-translational folding and oligomerization of the AEI membrane
protein. (Supported by the Medical Research Council of Canada.)
(M0/8,2/311)
c~-Crystallins from eye lens belong to the small heat chock protein family.
They are polydisperse ohgomers of about 800 kD. We have previously
shown that in vivo, the short range repulsive cc-crystallin interactions
account for eye lens transparency [ 1].
At high temperature, the association of a-crystallins to partially denatured
proteins is known as a chaperone effect (although not followed by
renaturation of the denatured species). It was therefore hypothesized by
different groups that in eye lens, the associatmn of ct-crystalhns to
denatured 13- and ~,- crystallins, thus preventing further denaturation,
precipitation and therefore light scattering, protects against cataract. The
structure of the ct-13--crystallin assemblies is not known, although some
cx-crystalhn peptides have been reported to be specifically involved in the
interactions. We have started to design a chaperone assay in order to
classify the ability of the vartous 13- and ,/-crystallins, rather native or
recombinant, to associate to ct-crystalhns in different physico-chem~cal
conditions. The method combines size exclusion chromatography and
small angle X-ray scattering and allows us both to measure the complex
molecular weight and to quantify the changes in ct-crystalhn repulsive
interactions induced by the 13-and ~'-crystallin associatmn.
[1 ] Vrrrtout F., Delaye M. & Tardleu A. J M o l Biol 205 (1989) 713
keywords : chaperone, crystallins, interactions
s248
(Mo/8.2/312)
Abstracts FEBS'99
(Mo/8.2/314)
Abstracts FEBS'99
s249
(Mo/13.3/316)
The Raf kinases play an important and specific role in the activation
of Extracellular signal-Regulated Kinases (ERK) cascade. Beside its role in
the control of proliferation and differentiation, the ERK cascade has also
been implicated in neuron-specific functions. In order to gain clues on the
function of Raf kinases in the adult central nervous system, we
performed a comparative analysis of the distribution and subcellular
localization of the different Raf kinases in rat brain with antibodies
specific for the different Raf kinases.
We show that B-Raf and Raf-I proteins are present in the brain
whereas A-Raf is not detected, lnterestingly~ the two Raf proteins are
detected in the same brain areas and have an approximately similar
pattern of distribution with a rostro-caudal decreasing gradient of
expression. These two kinases are localized mostly in neurons and likely
in the same cells but they showed differences at the subcellular level.
Raf-1 is localized mainly around the nucleus whereas B-Raf is largely
distributed in the cell bodies and in the neuritic processes. In addition, we
demonstrated that numerous B-Raf isofomas are present m the brain.
These isoforms have a differential pattern of distribution, some of which
are ubiquitously expressed whereas others are localized to specific brain
areas. These isoforms also have a clear differential subcellular locahzation.
Thus these results suggest that each Raf protein could have a distmct
function in the brain.
(Mo/13.3/317)
(Mo/13,3/318)
Long-term
activation
of
ERK
(extracellular
signal
r e g u l a t e d kinase) enzymes induced by NGF (nerve growth factor)
is t h o u g h t to be a key event in neuronal differentiation of
PC12 cells occurring in response to this agent. Moreover, the
translocation of ERKs from the cytoplasm to the nucleus can be
detected exclusively upon treatments eligible causing neuronal
d i f e r e n t i a t i o n of PC12 cells. Trying to establish a firm causal
r e l a t i o n s h i p between these remarkable events as well as explain
their biological signicance we examined wild type PC12 cells in
c o m p a r i s o n with a mutant PC12 subclone expressing a dominant
negative Ha-Ras Asn-17 protein. In these cells - named Z-M17-5
cell line - MGF is not able to cause neuronal differentiation,
however, this block caused by the interfering Ras mutant can be
bypassed by combined treatment with NGF+dbcAMP or NGF+ionomycin
but not with NGF+TPA.
In our experimental system both wild type PC12 cells and
the m u t a n t Z-M17-5 subclone were treated with different growth
factors (EGF and NGFi alone or in combination with the second
m e s s e n g e r analogues mentioned above. Besides, we examined the
effect
of
phosphatase
inhibitors
(okadaic
acid
and
orthcvanadate) on ERK phcsphorylation and nuclear translocation
too. The time course of phosphorylation was detected by Western
blot analysis using phospho-specific ERK antibody; the chasing
for p r o t e i n movement was carried out performing immunoc y t o c h e m i s t r y using the streptavidin/biotin method.
Our results in detail are presented in the poster.
s250
(Mo/13.3/319)
Abstracts FEBS'99
(Mo/13.3/321)
(Mo/13.3/322)
s251
(Mo/13.3/324)
(Mo/13.3/326)
s252
Abstracts FEBS'99
(Mo/13.3/327)
(Mo/13.3/329)
(Mo/13.3/330)
n l i x t u r c o f tv.,o o r m o r e
heterodimer containing two regulatory (R) and two catalytic (C) subunits.
v, htch Js moq easiI3 and most rapidly metabohzed. Despite tile presence ot
Two mouse C subunit isoforms (Ca and CI3) and a pseudogene (Cx) have
the other sugars in the growth medium, the synthesis of the enzymes
been previously cloned. Three splice variants of the murine C!3 gene (C,31-3)
necessary lbr tile uptake and metabohsm of these sugars rcmams repressed
have been characterized and arise from the use of alternate promoters. Cc~ and
until tile preferred carbon sources exhausted This phenornenon Is called CCR.
C131 are N-myristylated and expressed widely whereas the CI32 and C~3 are
of a novel ovine sperm C subunit, we show that the mouse Ca gene encodes
a second isoform we call C~2. The complete cDNA of this new isoform has
been cloned and sequenced and we have mapped the transcriptional start site.
Cod (formerly called Ca) and Ca2 isoforms differ only in their aminoterminal sequence. The Ccd contains a consensus sequence for Nmyristylation whereas the Ca2 does not contain this consensus sequence. The
Ccc2 is the major isoform expressed in mouse testis and using Northern blot
we do not detect any C~x2isoform in brain or heart. Based on its abundance in
adult testis, we speculate that the Cc~2 isoform is the major C subunit in
developing sperm and may play a specific role in sperm maturation or
motility.
* J.-L. D. is supported by a fellowship of the "Human Frontier Science
Program".
In
CL'R of/..
t,scl
and
Abstracts FEBS'99
(Mo/13.3/331)
s253
(Mo/0.1/332)
Urokinase
induces
activation
and
formation
of
Stat
complexes
in human
vascular
smooth
muscle
cells
I. Dumler. A. Kopmann. K. Wagner, H. Hailer. and D.-C. Gulba
(Mo/0.1/333)
(Mo/0.1/334)
s254
Abstracts FEBS'99
Abstracts FEBS'99
(Mo/13.3/339)
The chicken erythroblast cell line HD3 has high glucose transport activity,
which is lost upon differentiation to the red cell phenotype. HD3 ceils,
when incubated under conditions where maturation occurs, show
substantial loss of glucose transporter (GLUT) mRNA. To assess whether
the cAMP or phosphorylation status could sustain losing of GLUT
proteins and GLUT mRNA, the HD3 cells were incubated in the presence
of different phosphatase inhibitors.
Besides decreasing of GLUT transporter activity and mRNA level, the
differentiation of HD3 cells is characterized by increasing of total amount
of pbosphorylated proteins and cAMP level. By using different
phosphatase inhibitors (okadaic acid and sodium vanadate) and a cAMPelevating agent (tBMX), remarkable changes in GLUT transporter activity
and mRNA expression were observed.
In the presence of okadaic acid, the cAMP level did not change
significantly and was maintained stable during experiment. The GLUT
transporter activity decreased and synthesis of Hb was even higher than in
the presence of heroin and butyric acid. The mRNA increased with time of
induction.
Sodium vanadate increased phosphotyrosine-containing proteins, the
cAMP level decreased and synthesis of Hb was very low. The amount of
GLUT mRNA significantly increased, as well as the activity of GLUT
transporter.
IBMX, a cAMP elevating agent, increased the GLUT mRNA level, but
not the GLUT transporter activity. The synthesis of Hb was low.
The presence of phosphatase inhibitors seems to stabilize GLUT mRNA,
but not the proteins. The change of intracellular cAMP level did not affect
the activity of GLUT transporter neither GLUT mRNA. It appears that
phosphorylation/dephosphorylation is closely associated with the
regulation of GLUT expression.
(M0/13.3/341) Effect of insulin and pcroxovanadate on 3-phosphoinositide-dependent protein kinase localization in adipocytes
S Grdlo , JF Tanti,T Grtmeaux , A Casamayor,~ D Alessi* Y
Le Marchand-Brustel " INSERM E99- I 1 and U 145 Nice France. "~
Umrersity of Dundee, Dundee, Scotlan~L U.K.
s255
(Mo/13.3/342)
s256
(Mo/13.3/343)
Abstracts FEBS'99
(Mo/13.3/344)
(Mo/13.3/345)
(Mo/13.3/346)
PKCp_, a novel PKC, differs from all other PKC isoenzymes in that it
contains a putative transmembrane domain and a pleckstrin homology
domain, and lacks an autoinhibitory pseudosubstrate. Moreover, no
physiological substrates have been identified and well-known PKC
substrates are just poorly phosphorylated by PKCo. in vitro. Therefore,
the role of PKC~t in signal transduction is still obscure.
We have started to establish human platelets as a model system for the
investigation of PKCp. functioning. Expression of PKCI.t in human
platelets was demonstrated by immunoblotting of platelet extracts using
specific anti-PKCp, antibodies. Unstimulated platelets contained larger
amounts of the enzyme in the cytosol than in the particulate fraction.
Stimulation by the phorbol ester TPA caused translocation, and
phosphorylation of PKCp_, as demonstrated by a characteristic mobility
shift [1]. Upon TPA-stimulated phosphorylation of platelet extracts in
the presence of G66983, which is known to inhibit all PKC isoforms
except PKCp_ [2], we were able to identify three putative substrates of
PKC/a with apparent molecular weights of 52, 62, and 97 kDa. However,
the major PKC substrate present in platelets, pleckstrin, was found to be
phosphorylated just very weakly by PKC~. Regarding a possible role of
PKC~a in apoptosis of platelets, we found that PKC~t contains a
recognition site for caspase 3 and was specifically cut at this site by the
protease. Moreover, we could demonstrate significant expression of
caspase 3 in platelets.
[1] Rermecke, J., Johannes, F.-J., Richter, K.H., Kittstein, W., Marks, F.,
and Gschwendt, M. (1996) Eur. J. Biochem. 242,428-432.
[2] Gschwendt, M., Dieterich, S., Rennecke, J., Kittstein, W., Mueller,
H.-J., and Johannes, F.-J. (1996) FEBS Lett. 392, 77-80.
[2].
Here we report the inhibitory activity of ECAP against the
membrane (EGF-R) and cytoplasmic (PKC!-t, Syk, Lyn) protein kinases.
The peptide reduced the phosphorylation by all investigated kinases with
half-inhibitory concentrations in submicromolar concentrations range.
Besides that ECAP was found to cause erythrolysis and to affect the
growth of cultured eukaryotic cells. Based on the results represented
here we also suppose the ability of ECAP to interact with plasma
membranes leading to their permeabilization.
Abstracts FEBS'99
(Moll3.3/347)
s257
(Mo/13.3/348)
(Mo/13.3/349)
(Mo/13.3/350)
s258
(Mo/13.3/351)
Abstracts FEBS'99
(Mo/13.3/352)
(Mo/13.3/353)
(Mo/13.3/354)
Growth factors activate of the p42/p44 MAPK cascade during the entire
G0/GI period of the cell cycle. We had shown that this activation is
absolutely reqtured for fibroblast cell growth. The two upstream kinases of
the module. Raf-1 and MEK are exclusively cytoplasmic, whereas p42/p44
MAPKs translocate to the nucleus during mitogenic stimulation. Recently,
we have shown that preventing p42/p44 MAPKs nuclear translocation by
sequestering them in the cytoplasm severely reduced grov, th factor induced
cell cycle progression. Therefore nuclear translocation of p42/p44 MAPKs is
a critical step in the growth signaling cascade.
The nuclear translocatlon of p42/p44 MAPKs is controlled by the strict
activation of the p42/p44 MAPK cascade suggesting that p42/p44 MAPKs are
retained in the cytoplasm of resting cells via a MAPK-sensitive 'anchor'.
During the initial steps of mitogenic signalling (less than 30 minutes),
p42/p44 MAPKs tmnslocate to the nucleus independently of protein
synthesis. However, in the middle of the GI phase of the cell cycle,
activation of p42/p44 MAPK triggers the neosynthesis of short-hved nuclear
anchoring protein(s) that retain p42/p44 MAPKs m the nucleus.
The temporal activation is another key issue for determining biological
responses In this respect, expression of MAP kinase phosphatases (MKP1,
2. 3) is also strictly controlled by the activation of file MAP kinase module,
providing an autoregulatory mechanism. Using specific anubodics that
recognise only the active forms of p42/p44 MAPKs, first we were able to
demonstrate that active p42/p44 MAPKs translocate within five minutes to
the nucleus. Surprisingly, at times when we detect the maximal accumulation
of p42:p44 MAPKs in the nucleus (three hours), it is inactive. We therefore
propose thal long term p42/p44 MAPK nuclear retention is a mechanism of
signal termination.
Abstracts FEBS'99
(Mo/133/355)
s259
(Mo/13.3/356)
(Mo/13.3/357)
(Mo/13.3/358)
s260
(Mo113.3/359)
Abstracts FEBS'99
Ribosomal $6 kinase-2 is one member of a family of growth factorregulated serine/threonine protein kinases, that contain two heterologous
kinase domains linked together by a regulatory region. Substrate
phosphorylation is mediated by the N-terminal kinase domain of RSK2.
Full activation of the enzyme requires activation of both the C- and Nterminal kinase domains, and phosphorylation of serine and threonine
residues located in the linker region. Whereas extracellular signal-regulated
kinases (ERK) activate the C-domain upon mitogenic stimulation, the Ndomain is activated both by a constitutive-activated kinase, possibly
PDKI, and by the activated C-domain, suggesting PDK1 and ERK act in
a cooperative manner. However, the way the two kinase domains of
RSK2 cooperate according to their phosphorylation state is not yet fully
understood. The goal of this work is to study the subordination of one
domain to the other according to the stimulation state of the cells. For
this purpose, we have developed antibodies directed against PhosphoSer227RSK2 (activation loop of the N-domain) and PhosphoThr577RSK2 (activation loop of the C-domain). In addition, we have
used the commercially available anti-Phospho-Ser386RSK2 antibody
(linker region). Our first results indicate that in unstimulated cells, the Ndomain contributes to repress the activation of the C-domain. In this
conformational state, phosphorylations of Ser227 and Ser386 favor this
inhibition. In contrast, when cells are stimulated with growth factors, thc
inhibition is removed. This step allows the activation of the C-domain via
the ERK pathway and leads to an increase of the phosphorylation levels
of Ser227 and Ser386. As a consequence, the enzyme is fully activated.
(Mo/13.31361)
(Mo/13.3/360)
(Mo/13.3/362)
Abstracts FEBS'99
(Mo/13.3/363)
Augmentation O f Methylprednisolone-Indueed
Differentiation Of Myeioid Leukemia Cells By
Serine/Threonine Protein Phosphatase Inhibitors
S. B. Omaya S. Uzunoglub, R. Usluc, M. Tobu~, G. Saydama,
E.Terzioglua, F. Buyukkececi~,
' Ege Univ. School of Medicine, Dept of Hematology., bCelal
Bayar Univ., Fac. of Science and Art, Dept of Biology, Manisa,
~Ege Univ., Dept ofOncology., d Dept of Immunology.Izmir,
Turkey. omay@med.ege.edu.tr
(Mo/13.3/365)
s261
(Mo/13.3/364)
(Mo/13.3/366)
The anion exchange band 3 protein is the main red blood cell (RBC)
protein phosphorylated by tyrosine kinase. The RBC also contains a
band 3-associated, Mg~'-activated phosphotyrosine phosphatase (PTP)
The PTP is PTP1B or related to it (as identified by an antibody to an
epitope in its catalytic domain and by molecular mass). We studied band
3 phosphotyrosine (PT) and phosphotyrosine phosphatase (PTP) in human
RBC. RBC band 3 is usually unphosphorylated in intact normal R B C ,
but is present as PT under conditions ofRBC thiol oxidation (by diamide)
and when RBC Ca'~ is increased (by ionophore) In both cases, the band
3 tyrosine phosphorylation is the result of PTP inhibition, allowing PT
formation by kinase activity In the case of red cell thiol oxidation, the
PTP (which has cysteine in the active site) is inhibited via PTP-band 3
mixed disulfides formation. The inhibition is reversible in the RBC upon
reducing RBC disulfides to thiols, dephosphorylation of band 3 PT is
also achieved in membranes isolated from the oxidized RBC, following
reduction of membrane disulfides. In contrast, we show here that the
inhibition of PTP by increased RBC Ca-~ is irreversible. No
dephosphorylation of band 3 PT occurred in these RBC or in membranes
isolated from them. The Ca>-induced inhibition of PTP in human RBC
is not due to PTP degradation by the Ca2'-activated protease calpain
(based on the use of cell penetrating calpain inhibitor); it may in part be
due to activation of PKC (as indicated by effects of PKC inhibitors),
probably via PTP serine phosphorylation. PTP inhibition may play a role
in tyrosine phosphorylation observed in other cells under conditions of
oxidative stress and increased Ca ~-*
s262
(Mo/13.3/367)
Abstracts FEBS'99
(Mo/13.3/368)
(Mo/13.3/369)
(Mo/13.3/370)
Abstracts FEBS'99
(Mo/13.3/371)
s263
(Mo/13.3/372)
(Mo/13,3/373)
Shc is an adaptor protein that exists in three isoforrns; P46, P52, and P66, in
mammalian fibroblasts. Shc has multiple protein-protein docking sites and is
believed to play an important role in cell proliferation and differentiation under the
control of activated tyrosine kinases. In the previous meeting, we have reported
that P52Shc, but not P46Shc, binds to the IDA (inter-DFG-APE) region of tyrosine
kinase c-Src that has been implicated in autoregulatory mechanism of the kinase
activity [1] and protein-protein interaction [2]. We have also reported that P52Shc
stimulates the kinase activity of c-Src several fold and the activated c-Src is in
association with P52Shc in mitotic NIH 3T3 cells.
In the present meeting, we have prepared NIH 3T3 cells expressing each of the
She isoforms as GFP (green fluorescent protein)-fusion protein and examined their
ability to stimulate endogenous c-Src activity. We have found that c-Src activity is
stimulated in GFP-P52-expressing cells but not in GFP-P46-expressing cells
irrespective of the serum stimulation of the cells. On the other hand, we could not
detect any significant difference in the subcellular localization of GFP-Shc proteins
in serum-starved, serum-stimulated, and nocodazole-treated mitotic cells. In rat
PC1.2 cells, it has been demonstrated that nerve growth factor-dependent tyrosine
phosphorylation of Shc is partially inhibited by tyrosine kinase inhibitors and by the
PI 3-kinase inhibitors such as wortmannin and LY294002 [3]. We have also found
that serum-dependent activation of c-Src in NIH 3T3 ceils is sensitive to the PI 3kinase inhibitors. We are now investigating the effect of the PI 3-kinase inhibitors
on the Sbc-induced up-regulation of c-Src. Present experiments have also been
designed to define a critical segment of P52Shc for its binding to the c-Src IDA
region and for the ability to stimulate the c-Src activity. A series of glutathione Stransferase (GST)-fusion proteins containing a part of P52Shc molecule were
prepared. By performing surface plasmon resonance analysis and in vitro kinase
assay, it was demonstrated that GST-fusion proteins containing amino acid residues
29~,9 of P52She, most of which is missing in P46Shc, are capable of interacting
with the e-Src IDA region and stimulating c-Src activity.
References
[I] Fukarni, Y. et al. J. Biol. Chem., 271, (1993) 13250.
[2] Sato, K.-I. et aI. Biochem. Biophys. Res. Commun., 210, (1995) 844.
[3] Sato, K.-I. et al. Biochem. Biophys. Res. Commun., 250, (1998) 223.
(Mo/13.3/374)
s264
(Mo/13.3/375)
Abstracts FEBS'99
(Mo/13.3/376)
(Mo/13.3/377)
The reaction catalysed by protein kinases involves the transfer of the ?"
phosphate of ATP to a serine, threonine or tyrosine residue. It is likely that
all protein kinases utilise a common catalytic mechanism. Among the highly
conserved amino acids is an aspartate residue [1] Another key aspect of
regulation, is phosphorylation on a residue (or residues) located in the
activation segment at the centre of the kinase domain. The activation
segment in protein kinases refers to the amino acids between the conserved
DFG triplet to the APE triplet sequence and contains residue(s) that are
phosphorylated in many but not all protein kinases In this work, we address
the contributions of these residues to kinase catalysis using phosphorylase
kinase as a model system Phosphorylase kinase (PhK), the first protein
kinase to be discovered [2], catalyses the phosphorylation of a single serine
residue, S 14, in inactive glycogen phosphorylase b (GPb), thereby converting
phosphorylase to active glycogen phosphorylase a (GPa) and stimulating
glycogen degradation. The kinase domain of the 2" subunit which is the
catalytic one comprising residues 1-298 has been crystallised [3] in a ternary
complex with the non-hydrolysable ATP analogue, AMPPNP, and a peptide
substrate. The resulting structure showed the conformation of an active
kinase which is constitutively active without the need for any further
modification. In this case the role of the phosphorylated residue is played by
E182 In order to explore the contribution to catalysis of the conserved
D149 and the contributions of electrostatic interactions to the correct
localisation of the activation segment, we have carried out site-directed
mutagenesis studies on the catalytic DI49, as well as E182, RI48 and
surrounding interacting residue Y206 The kinetic parameters were measured
and the results suggest a mechanism in which the primary determinants for
catalysis come from the correct alignment of reacting groups coupled with
strong interactions that can stabilise the transition state.
[1] Taylor, S.S., et al., Structure 2 (1994), 345-355
[2]. Fischer, E H , et al, .Z Biol. Chem. 216, (1955) 121-132
[3] Lowe, E D., et al, E M B O ,I. 16, (1997) 6646-6658
(Mo/13.3/378)
(M0/13.3/379)
s265
6-Pyruvoyl-tetrahydropterin
synthase
(PTPS)
participates
[21.
[11 Gehrmann T. et al.. Eur. J. Biochem. 253, 1998. 357
[2] Gehrmann T. et al.. Bioch]m. Biophys. Acta, in press
(Mo/13,3/381) Activation by EGF, T G F ~ and HGF of several members of
mitogen-activated protein kinases in hepatocytes
G. H. Thoresen, T. Christoffersen.
Department of Pharmacology, Universityof Oslo, N-0316 Oslo. Norwa)
References
[1] Peak Met al., Biochem Soc Trans 21(1993) 494S
[2] Adachi T et al., Hepatology 23 (1996) 1244.
[3] Thoresen GH et al., J Cell Physiol 175 (1998) 10-18.
in
(Mo/13.3/382)
s266
(Mo/13.3/383)
Abstracts FEBS'99
(Mo/13.3/384)
In plants, guard cells are located at the end of the transpiration stream V,'lthin
the plant, and their control of stomatal aperture is crucial to manmise water loss
from the leaf tissues while balancing the requirement of CO_- exchange for
photosynthesis Water availability and CO, partial pressure modulate stomatal
aperture by modlf3mg the turgor of guard cells Phosphoenolpymvatc
carbox31ase (PEPCase) is a major enz3me in the pathwa? leading to malate
s.~nathesis which is. ~ith chloride, the mare countenon for potassium
accumulated m the guard cell xacuole during stomataI opening Whether
phosphor31ation of PEPCase could be a major event m guard cell regulation
was investigated Antibodies (APS-IgGs) raised to a synthetic pol3peptlde of 23
amino acids containing the phosphorylatmn site (ser-8) of the Sorghum
PEPCase recogmsed the guard cell PEPCase from Commehna communis L. at
110 and 120 kDa The in vitro phosphoBlatlon of the 110 kDa lsoform by PKA
~as 50% inhibited by APS-IgGs demonstrating that the regulator3
phosphorylation site x~as present and functional in the guard cell enzyane
Phospho~'lation b3 PKA resulted m a 50% increase in the Vmax of the enz3rne
(4 2 0 3 compared to 2 8 0 4 pmol h-I GCP-I. pH 7.3 and 200 ~tM PEP)
and a reduction in L-malate mb~bltlon (64% compared to 82% mhibman by" 1
mM L-malate) In the presence of 1 mM L-malate (pH 7 3) phosphor31ationof
the enzyme by PKA resulted in a 3-fold increase in the Vmax. Binding of APSIgGs to the phosphorylatlon site of the enz3me led to the highest activity (10 9
2.6 pmol h- l per guard cell protoplast) and to an absence of inhibition by 1 mM
L-malate at pH 7 3 and 8.0. These changes in the kinetic properties of the
enzyme after phosphorylaUon should have important consequences in terms of
stomatal regulation
Abstracts FEBS'99
(Mo/13.3/387)
s267
s268
Abstracts FEBS'99
(Mo/19.1/390)
Apo c4 allele
~:4(-I
c41~ )
ACE D ~dlele
Dl-)
Dr+)
}
~
[
[
]
Alzheimer(%}
Frequenc),
Control,
Frequenc
)' s,(%)
28
7
80
20
28
1
96
-~4
4
31
114
886
8
21
276
724
I
2
3
(Mo/19.1/391)
(Mo/19.1/392)
l n t e r f e r o n s Induce E x p r e s s i o n o |
SMN and SMNc Genes and Restore SMNc Protein
Level in SMA. S. Baron-Delag(, A. Abadie ~, J. Melki~ and
L. Beretta'. INSERM, Utlitd 365. hlstitut Curie. Paris and 'IGBMC.
INSERM/CNRS/ULP. Srtasbottr~. France.
widespread than that of striatin, it follows that striatin is but one of several
eDNA library by the yeast two-hybrid method has been achieved. A major
partner was found, phocein, a hitherto unknown protein of 26 kDa which
appears to be well conserved during evolution. Validation of the mteraction
of phocein with endogenous brain striatin was achieved by in vitro assays.
Incubation of the fusion protein GST-phocein with various brain
subfraetions resulted in the coprecipitation of striatin. Endogenous striatin
and phocein were also found to colmmunoprecipitate, as shown by using
their respective antibodies. The interaction of stnatin and phocein is thus
established. Phocem transcripts are mostly present in the central nervous
system, cerebellum, brain and spinal cord, and in the adrenal glands.
Phocein is detected by lmmunocytochemistry in the soma and processes of
a majority of neurons in adult rat brain. Axon bundles heavily labeled by
anti-phocein antibodies are scattered all over the brain, without any
obvious systematisation; m the cerebellum, m particular, the basket cells
Abstracts FEBS'99
(Mo/19.1/393)
s269
(Mo/19.1/394)
The amyloid precursor protein (APP) is one of the major protein involved in
Alzheimer's disease. Soluble and membrane-bound isoforms of 13-amyloid
protein precursor (APPs and APPm) of Alzheimer's disease were extracted
and purified from porcine brains [1]. APPm is an integral type-I membrane
glycoprotein that spans the lipidic bilayer once.
A lipid-APP binding assay was developed to demonstrate the direct
interaction of APP w~th various lipids. Solid phase ELISA for APP binding
to phospholipid was performed. Microwell plates were coated with different
lipids and subsequently incubated with APP. Control binding of APP to the
microtiter plates was performed without lipid. It was found that APPm binds
to all lipids tested with a preference for phosphatidyl serine, sphingomyelin
and lactocerebrosides. The binding of APPm to sphingomyelin was
approximately 35% higher than the observed binding without lipids.
To better understand the binding of APP in lipid membranes, and eventually
to precise how it is cleaved to give 13-amyloid peptides, incorporation of
APPm into biomimetic membranes was performed. Liposomes were
obtained by dialysis of a mixture of phospholipid and octylglucoside.
Incorporation of APPm was carried out by preparing the Liposomes
suspensions with octylglucoside, addition of APPm and removal of detergent
by dialysis. The resulting vesicles were separated by sucrose density
gradient. The distribution of APPm into the liposomes was determined by an
ELISA test using polyclonal antibodies. It is possible to incorporate about 40
pmoles of APPm into the vesicles. Studies of factors controlling the binding,
e.g. lipid composition, pH, molar lipid/APPm ratio are in progress.
[1] L. de La Fourni6re-Bessueille et al. Eur. J. Biochem. (1997) 250 : 705.
(Mo/19.1f395)
(Mo/19.1/396)
s270
(Mo/19.1/397)
Abstracts FEBS'99
(Mo/19.1/398)
(Mo/19.1/399)
Abstracts FEBS'99
(Mo/19.1/401)
s271
(Mo/19.1/402)
Situations such as limb immobilization, bed rest, and space flights imply
reduction or abolition of skeletal muscle activity. This muscle disuse
leads to progressive muscle atrophy. Regulation of the atrophy process is
poorly understood but has already been shown to take place at the
transcription level for several genes
In order to draw a more global picture of the molecular mechanisms
induced by muscle disuse, we developed a strategy to find genes with an
altered expression in the model of rat soleus muscle unloaded by
hindlimb suspension. This strategy is based on the differential screening
of subtracted libraries made with the recently described suppression
subtractive hybridization technology. More than 30 genes have been
found up- or downregulated in our model. Approximately one third of
them represent novel genes without match in public available databases
Here is presented a preliminary characterization of these novel genes in
terms of RNA messenger sizes, full length cloning, sequence analysis
and tissue specificity
This work indicates that i) a wide spectrum of cellular functions is
involved in the response of muscle to disuse, ii) muscle activity
participates to the regulation of gene expression, and iii) suppression
subtractive hybridization technology is an efficient approach to detect
alteration of gene expression and to clone novel moderately expressed
genes
(Mo/19.1/403)
(Mo/19.1/404)
s272
(Mo/19.1/405)
Abstracts FEBS'99
(Mo/19.1/406)
(Mo/19.1/408)
References.
Abstracts FEBS'99
(Mo/19.1/409)
s273
(Mo/19.1/410)
(M0/19.1/412)
s274
(Mo/19.1/413)
Abstracts FEBS'99
(Mo/19.1/414)
Similar to SH2 and SH3 modules, the WW domain mediates proteinprotein interaction[l]. It is present in more than 100 structural and signaling
molecules in Eucaryotes, including ubiquitin ligases, dystrophin and adaptor
proteins [2]. The WW domain binds proline-rich ligands with the core
consensus Pro:Pro:Xxx:Tyr or 6xPro. Phosphorylation of Tyr abolishes the
binding. Recently a subset of WW domains was shown to bind to phosphoserine and phospho-threonine containing ligands in the phosphorylationdependent manner. The WW domains have been implicated in several genetic
diseases including Liddle Syndrome (hypertension), Muscular Dystrophy,
Alzheimer and Huntington Diseases [1,2]. We focused on Muscular Dystrophy
by identifying a protein ligand that binds to the WW domain of human
dystrophin. In addition, we decided to study ligands to the WW domain of
FE65 adaptor protein.
FE65 interacts with the internalization signal of
Alzheimer's beta-amyloid precursor protein and was proposed to regulate its
processing. We elucidated the role of the WW domain of dystrophin and
surrounding sequence in binding t3 -dystroglycan. We showed that the WW
domain of dystrophin along with the EF-hand motifs is sufficient for binding to
the carboxy-terminus of 13-dystroglycan. Through site-specific mutagenesis and
in vitro binding assays, we demonstrated that binding of dystrophin to the
carboxy-terminus of 13-dystroglycan occurs via a ILdystroglycan
Pro:Pro:Xxx:Tyr core motif [3]. Precise mapping of this interaction could aid in
therapeutic design. To understand the function of the FE65 adapter protein we
identified its binding partners.
Proline-rich sequences sharing a
Pro:Pro:Leu:Pro core motif were recovered by screening expression libraries
for ligands of the FE65 WW domain. We identified two FE65WW ligands as
the 80 and 140 kDa isoforms of Mena, the mammalian homolog of the
Drosophila Enabled gene [4]. Finally, we demonstrated that Mena binds to
FE65 in vivo by coimmunoprecipitation assay from COS cell extracts. Further
characterization of the Mena-FE65 complex should identify a physiological role
for these proteins in amyloid precursor protein biogenesis.
Study of WW domain of dystrophin and FE65 adapter protein should
illuminate molecular mechanisms that underlie Muscular Dystrophy and
Alzheimer's Disease.
(Mo/19.1/415)
improven-~ of chronicm
HC carmotbe decreased penmnenfly, but the decrease al~r each H.E.L.P. sessionr t ~ a
be able to supIress a timtgr ~aease ard consequam'yprevent from further deterioration
of the disease.
(1) Malk~w MR. et aL CI~_Chem_40, (1996) 857.
(2) Weiss G. et al., Atherosclemsis106, (1994) 263.
(3) WalzlM. et al., Slroke 24, (1993) 1447.
(Mo/19.1/416)
Abstracts FEBS'99
s275
Fpg proteitt is one of the enzymes that initiate base excision repair
(BER). It removes 8-oxoguanine (8-oxoG) and irnidazole ringopened purines (Fapy) from oxidatively damaged DNA. Fpg
catalyses the hydrolysis of the base-sugar bond (N-glycnsylase
activity) and then, the DNA chain cleavages (,/3- and &elimination) at
3' and 5' side of the resulting abasic site (AP lyase activity) (1,2).
Using electrophoretic mobility shift assays, we compare the
specific binding of E. cull and L. lactis Fpg proteins to DNA duplexes
containing various cyclic and non cyclic AP site analogs. This
approach allows to show that:
(i) the ring-opened form of the AP site is the active form of
the substrate for Fpg AP lyase activity (the reduced AP site is the best
substrate analog for both enzymes as compared with the other analogs
tested in this study).
(ii) the 1,3-propanediol is a minimal AP site structure
allowing a Fpg specific DNA recognition,
(iii) the newly described cyclopentanol (a cyclic AP site
analog) is better recognized than tetrahydrofuran suggesting a
hydrogen bond between the C4'-OH of the sugar and a Fpg residue.
Footprinting experiments show that Fpg binds to six nucleotides
on the damaged strand and contacts only the base opposite the lesion
on the complementary strand.
This comparative study (3) and limited proteo~ysis experiments of
the free or liganded protein provide new structural and/or functional
reformations about frpg specific DNA recognition.
1. Boiteux, S. et al, EMBO J., 6, (1987) 3177,
2. Castaing, B. et al. Nucleic Acids Res., 21, (1993) 2899.
3. Castaing, B. et al, Nucleic Acids Res., 7. (1999) 608.
We present the fwst evidence for activation of polyADP-ribosepolymerase (PARP) by signals evoked in the eel] membrane (eg.
membrane depolarization~ nerve growth factors). PARP is an
abundant nuclear protein in eukaryotes that Catalyzes
polyADP-ribusylation of DNA-binding proteins, and thereby
modulates their activity. PolyADP-ribosylation is involved in
regulation of DNA repair, transcription and replication. The
presented evidence indicate that membrane depolarization
induces within minutes PARP activation in rat cortical neurons
and cardiomyocytes. In cortical neurons, signal-induced polyADP-ribosylation is mediated by activation of phospbolipase C
and inositol 1,4,5,-trisphosphate (IPj)-dependent Ca*2-release. It
is independent of the activity of phosphoinosltide 3-kinase.
Signal-induced activation of PARP is also independet of DNAnicks formation. These findings present a novel targert for
signal transduction from membrane to nucleus, which may
regulate the activity of proteins involved in DNA repair,
transcription and replication. They also predict a vital influence
of membrane depolarization on the viability of cortical neurons.
(We/2.2/002)
(We/2.2/004)
Base oxidation is one of the main types of DNA damage Among these
lesions, 8-oxo-7,g-dihydro-2'-deoxyguanosine (8-oxodGtm) is thought the
most abundant, and is highly mutagenic because of its propensity to mispair
with adenine[l] In Escherlchia coli, 8-oxodGuo is repaired by the enzyme
Fpg. Recently, a gene encoding an homolog ofFpg, AtM?cIH, was cloned in
the higher plant Arabidopsis thaliana [2] Like Fpg, its product seems to be
able to specifically excise 8-oxodGuo from double stranded DNA. Aider
oxidative treatments of Arabtdopsts thaliana cells, we measured the 8oxodGuo amount, and we examined the induction of rnRNA coding for
AtMMH (AtMMH-mRNA).
We observe that ~' radiation (up to 3 kGy), mostly inducing OH formation,
generates few 8-oxodGuo in plant DNA (15 8-oxodGuo/10~ Gua/Gy). In
parallel, y rays (100 Gy) do not increase the expression level of AtMMttmRNA over a 4 hours period. We notice that in cells grown in the dark
(cgd), the basal level of 8-oxodGuo is lower than in cells grown under light
(cgl) However, the basal level of AtMMtt-mRNA is the same either in cgd
or in cgl. We show that photosensitization by methylene blue, involving ~O2
formation, is responsible for an increase of 8-oxodGuo amount in DNA of
cgl. Its level increases up to 30 minutes of light stress, and then stabilizes
However, an exposure to ~O2 (up to 1 hour) seems to have no effect on the
AtMMIq-mRNA expression either in cgd and in cgl.
We hypothesise that OH induced DNA damage should be more rapidly
repaired than tO2 We think that the AtMMtt activity may be constitutive,
and that it may not be correlated with the level of AtMMH-mRNA. Plant
DNA oxidative lesions may also be repaired by other enzymes like an
hypothetic homolog of Oggl, the eucaryotic 8-oxodGoo repair protein
Analysis of 8-oxoGuo DNA excision activities are presently under
investigation
{1] Wood et aL, Biochem, 29, (1990), 7024.
[2] Ohtsubo et al., Mol Gen Genet ~259, (1998), 577
s276
(We/2.2/OOS)
Abstracts FEBS'99
(We/2.2/006)
(We/2.2/007)
(We/2.2/008)
CRYSTAL STRUCTURE OF A THERMOSTABLE TYPE B DNA POLYMERASE FROM
THERMOCOCCUS GORGON,4RIUS
Hopfner, K.-P *~, Eichinger, E. ~, Engh, R A. ~'2, Laue, F t, Ankenbauer, W. 2, Huber, R.~, Angerer, B.z
Most known archaeal DNA polymerases belong to the type 8 family, which also includes the DNA
replication polymerases of eukaryotes, but maintain high fidelity at extreme conditions. We describe
here the first crystal structure of an archaeal DNA polymerase, at 2.5 A resolution, from the
hypertherophilic Archaea Thermococcua gorgonanus and identify structural features of the fold and
the active site that are hkely responsible for its thermostable function Comparison w~th the
mesophilic B type ONA polymerase gp43 from the bacteriophage RB6g hightlghts thermophl~ic
adaptabons, which include the presence of two disulfide bonds and an enhanced electrostatic
complementarity at the DNA-protein ~nterface. in contrast to gp43, several loops in the exonuclease
and thumb domains are more closely packed This apparently blocks primer bmding to the
exonucleaae active site. A physiological role for this 'closed' conformation is unknown but may
represent a polymerase mode, in contrast to an editing mode with an open exonuclease site. This
archaea[ B DNA pclymerase structure provides a starting point for structure-based design of
poIymerases or ligands with applications in biotechnology and the development of antJvlral or
antlcanoer agents
References:
Hopfner KP, Eichinger E, Engh RA, Laue F, Ankenbauer W, Huber R, Angerer 8 (1999) Prec. Nat/.
Acad. Sci. USA, in press.
Abstracts FEBS'99
(wa2.2t009)
s277
(We/2.2/010)
(We/2.2/011)
(We/2.2/012)
s278
(We/2.2/013)
Abstracts FEBS'99
Three gene products, RuvA. RuvB, and RuvC, are revolved in the late
stages of homologous recombination which process a branching intermediate into
mature recombinant DNA duplexes. The RuvA-RuvB complcx facilitates the
ATP dependent migration of the Holliday junction created primarily by the
function of RecA protein. RuvA specifically brads to the four-way junction and
recruits RuvB helicase.
RuvA consists of three distinct domains termed domain 1. II, and 1II.
We have construcled an overproducing strain, which allows a large scale
purification of the NH2 fragment, containing domain I and I1 alone. The crystal
structure of the NH2 fragment determined at atomic resolution showed that its
backbone structure is identical to that in the full length protein, suggesting that
domain Ill makes no contribution to the formation of the RuvA tetrameric
structure. Biochemical characterization indicated that the NH2 fragment solely is
responsible for the junction DNA binding but domain II1 is not.
The function of isolated recombinant Domain Ill was examined using
the wild type and mutant molecules, which impair the ATP dependent branch
migration activity. The wild type domain Ill retained the secondary structure
comparable to that of the wdd type, while the mutant domain Ill reduced it. The
addition of the excessive amount of domain 11I in vitro inhibited the RuvAB
mediated branch migration, possibly because domain III competes with the intact
RuvA in RuvB binding. The excessive amount of wild type domain Ill or intact
RuvA inhibited the spontaneous ATPase activity of RuvB but its mutant did not.
In the presence of DNA, RuvA greatly stimulated the ATPase activity of RuvB,
while domain Ill still acted in a inhibitory manner. These results suggest that
domain Ill could modulate the RuvB activity. In the presence of DNA, the
stimulation of the RuvB ATPase activity by domain Ill wtthm RuvA may be due
to the maximization of the activdy in the formation of the complete RuvAB
complex.
To examine the solution structure of RuvA, small angel X-ray scattering
analyses were applied for full length RuvA and the NH2 fragment. Distance
distribution of the NH2 fragment m solution was in good agreement with that in
crystal structure, although the full length RuvA in solution showed a more
extended shape than the crystal structure. We assume that this difference should
be explained by the mobility of domain Ill, which is weakly bound to its
netghbormg subunit in the crystal.
UV sensitivity assay tn vtvo showed that neither of the NH2 fragment
(domain 1 and II) and domain III could not complement the ruvA deficient cells.
When they were expressed in the wild type strain, both of them increased the
sensitivity of the cells toward UV . Taken together, these findings imply that,
independently of domain I and It, mobile domain Ill parucipates in the regulation
of ATP dependent branch migration through interaction with RuvB.
(We/2.2/015)
(We/2.2/014)
S u b n u c l e a r distribution of p o l y ( A D P - r i b o s e ) and
its target proteins in differentiating rat g e r m cells
P. Quesada, M. Malanga, L. Atorino, F. Tramontano, A.
Petrella & B. Farina
Dipt. Chimica Organica e Biologica - Universtth "Federico I1"- Napoli
(We/2.2/016)
Abstracts FEBS'99
(We/2.2/017)
(We/2.2/019)
s279
(We/2.2/018)
(We/2.2/020)
Central neurons of the adult rats are post-mitotic cells. They cannot
divide but present a high metabolic activity. Oggl protein, a functional
homologue of the bacterial Fpg protein, is a DNA glycosylase which excises
8-oxoguanine (8-oxoG) and Fapy from damaged DNA [1,2]. These
metabolites are formed in living cells by actions of the reactive oxygen
species which are normally generated by physiological process. In this
work, we studied the presence of the OGG1 transcript and the Oggl
enzymatic activity in the CNS of rats. The OGG1 cDNA sequence (1.2kb)
and forty base oligonucleotide, that spans the region for catalytic site [3],
were radiolabelled using ramdom priming or terminal transferase methods
respectively. Coronal sections of 3% paraformaldehyde fixed brains were in
situ hybridised and treated for autoradiography. Radiolabelings by using
cDNA or oligoprobe were observed in the cytoplasm of a great number of
nervous cells. High levels of OGG1 transcript were observed in the
superficial cortical layers, hyppocampal formation, the supraoptic area, the
paraventricular and arquate nuclei, the dorsal and median raphe, the
cochlear nucleus, the motor nucleus of the brainstem, and the granular and
Purkinje cells of the cerebellum. Control experiment using 100-fold excess
of cold oligonucleotide showed a dissapearence of the label. In addition, a
low Oggl enzymatic activity was detected in brain homogenates from
punchs containing raphe, hypothalamus and cerebellum by using a
radiolabeled 34 mer oligonucleotide carrying a single 8-oxoG as specific
substrate. In conclusion, Oggl glycosylase activity and OGG1 trancript are
present in the rat CNS supporting the existence of DNA repair pathways in
neurons.
1) Thomas et al, Mol Gen Gent, 254, 1997, 171.
2) Radicella et al. PNAS, 94, 1997, 8010.
3) Prieto Alamo et al, Nuc. Acids Res, 26, 1998, 5199
s280
Abstracts FEBS'99
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Abstracts FEBS'99
s281
(We/4.1/024)
[I]
[2]
[3]
[4]
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s282
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Abstracts FEBS'99
Laboratoire de Phrsico-CTlimie Btologique CNRS UPRESA 5013, UCBLyon I, 43 bd du ] I novembre 1918, 69622 Villeurbanne Cedex, France
(We/4.1/028)
Cyclophilin B is a cyclosporin A-binding protein exhibiting peptidylprolyl cis/trans isomerase activity. We have previously shown that it
interacts with two types of binding sites on T lymphocytes. The type I
sites correspond to specific functiona/receptors and the type I1 sites to
sulphated glycosaminoglycans. The interactions of cyclophilin B with
type I and type lI sites are reduced in the presence of cyclosporin A and
of a synthetic peptide mimicking the N-terminal part of eyclophilin B
respectively, suggesting that the protein possesses two distinct binding
regions. In the present study, we intended to characterize the areas of
cyclophilin B involved in the interactions with binding sites present on
Jurkat cells. The use of eyclophilin B mutants modified in the Nterminal region demonstrated that the 3KKK5 and ~4yFD~6clusters are
probably solely required for the interactions with the type II sites. We
further engineered mutants of the conserved central core of cyclophilin
B which bears the catalytic and the cyclosporin A-binding sites as an
approach to localize the binding regions for the type I sites. The
enzymatic activity of cyclophilin B was dramatically reduced after
substitution of the R 62 and F ~7 residues, while the cyclosporin Abinding activity was destroyed by mutation of the W ~28 residue and
strongly decreased after modification of the F 67 residue. Only the
substitution of the W ~zs residue reduced the binding of the resulting
cyclophilin B mutant to type I binding sites. The catalytic site of
cyclophilin B did therefore not seem to be essential for cellular binding
and the cyclosporin A -binding site appeared to be partially involved in
the binding to type I sites.
(We/4.1/O30)
Abstracts FEBS'99
(We/4.1/031)
s283
(We/4.1/032)
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s284
Abstracts FEBS'99
(We/4.1/035)
(We/4.1/036)
Aspartic proteinases (AP) have been widely studied within the living world,
but so far no plant AP was structuraly characterized. Cardosins [1] are AP
from flowers of Cynara cardunculus L. that accumulate at the stigma papillae.
Their milk clotting activity have been exploited since the Roman Era in the
manufacture of traditional cheeses.
The refined cardosin A crystallographic structure (1.72 /~ resolution) [2, 3]
includes two molecules, built up by two glycosylated peptide chains (30 and
15 kDa each). The fold of cardosin A is typical within the AP family. The
glycosyl contents is described by 19 sugar rings localised on the molecular
surface away from the conserved active site, and show a new glycan of the
plant complex type. An RGD trimer was found on the molecular surface
opposite to the active site cleft.
An hydrogen bond between Gin 126 and Man[34 renders the monosaccharide
oxygen-O2 sterically unaccessible to accept a xylosyl residue, therefore
explaining the new type of the identified plant glycan. The crystal structure
suggests a possible mechanism by which cardosin A (localised at the flower
style) might be oriented at the cell surface so that its RGD motif could be
recognised by the pollen receptor.
References:
[1] Ramalho-Santos et al. Planta 203, (1997)204.
[2] Bento et al. Acta Cryst. D 54, (1998)991.
[3] Fraz~_oet al. (1999) submited.
(We/4.1/037)
(We/4,1/038)
Abstracts FEBS'99
(We/4.1/039)
s285
(We/4.1/040)
Besides the active pancreatic lipase (PL) which plays a major role m
dletaD" fat digestion, the presence of pancreatic hpase related protein 1
(PLRP1) has been reported both in the pancreas and pancreatic juice of several
mammals [1]. Surpnsingly, the amount of PLRP1 relative to PL vanes
considerably according to species. In this respect, high amount of this protein
was found in adult dog and cat pancreas in contrast to what was found in rat and
pig.
Despttes the presence of all the amino acids involved in catalysis
(catalytic triad, oxyanion hole, colipase binding, flap) PLRPI displays a very
low lipolytlc activity. Domain exchange experiments bev,veen horse PL and
dog PLRPI showed that the veD, low activity of PLRP1 results mainly from
particular features of the N-terminal domain of this protein.
Therefore, based on sequence comparison and modelling experiments,
five residues located in the vicinity of the active site pocket have been selected
for site directed mutagenesis. The resulting PL and PLRP1 mutants were
expressed in insect cells and subsequently purified. Investigation of the
catalytic properties of the recombinant protems reveals that two substitutions
m positions 179 and 181 in PLRP1 account for the very low activity of the
protein. Substituting Pro 181 for Ala or Ala 179 for Val in PL results in a
significant or complete loss of activity, respectively. As expected restoring a
significant lipolytic activity in PLRPI requires the double mutation Val179Ala
and A181Pro.
In conclusion, th~s work allows to better understand the stmctoral bases
of the lack of lipolytic activity of PLRP1 and brings new insights on the
structure/function relationships of the pancreatic lipase by ~dentifying
important residues. However, the presence of significant amounts of PLRP1 in
some species remains puzzling.
P~elelK;e
[1] Crenot~ I., Foglizzo, E. Kerfelec, B., V4nne, A. Pignol, D.. Hermoso, J.. Bonicel, J
and Chapus, C. (1998) Protein Engng. 11, 135-142.
(We/4.1/041)
In Gram negative bacteria, UDP-N-acetylglucosamine (UDPGIcNAc) is situated at the branchpoint of the biosynthetic pathways of
two essential cell-envelope components, namely, peptidoglycan and
lipolysaccharides. This essential metabolic pathway, which represents
potential targets for new antibacterial compounds, was recently
investigated in detail. The four-step formation of UDP-GIcNAc from
fructose-6-P has bee elucidated in Ecoli. It involves the successive
actions of glucosamine-6-P synthase (GImS), phasphoglueosamine
mutase
(OlmM),
glucosamine- 1-P
acyltransferase
and
Nacetylglucosamine-1-P uridyltransferase activities, the two latter activities
being carried by the same enzyme, GlmU.
The E c o l i phosphoglucosamine mutase has been overexpressed
and purified. Kinetics studies of wild-type and histidine tagged GImM
enzymes from E.coli have been realized. The GlmM enzyme has been
shown to be active under a phosphorylated form and to catalyze its
reaction according to a Ping-Pong bi-bi mechanism. HPLC coupled to
mass spectrometry was used to separate and characterize the
dephosphorylated and phosphorylated forms of the enzyme and sitedirected mutagenesis has allowed us to identify the site of
phosphorylation. The non-specific activity of the enzyme on glucosephosphate isomers has also been investigated.
The level of phosphorylated enzyme may be a regulation factor of
the biosynthetic pathway of peptidoglycan. How the enzyme gets
phosphorylated in the cell remains an open question. Investigations trying
to elucidate this problem have been carried out.
A GImM protein has been identified in two other bacteria :
Helicobacter pylori and Staphylococcus aureus.
(We/4.1/042)
s286
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Abstracts FEBS'99
(Wd4.1/044)
i,h3 dology hlvtttute. Acad Si. 370100 Baku. Azerbaqan Medtcal Nohel
l, stitttte /or Bk~hemi~trv.Karolin ska In.~rintte. S- 17177 Stockltohn. Slrede,
EPR spin trap method was used to investigate production of superoxide anion
radicals. O~'-, and hydroxyl radicals, OH', in vit;.-) by flavin containing
enzymes. E.coli Thioredoxm rcductases (TrxR), calf thymus TrxR and the
mutant ScCys498/Cys of rat recon-tbinant TrxR, as well as yeast glutathione
reductase (GR) were studied. TrxRs upon treatment w~th dimtrochlorobenzene
(DNCB) acquired not only the ability to generate superoxide anion radicals
O_~' but also the ability to generate hydroxyl radicab, OH'. The production of
OH" was observed when mixtures of the enzymes with NADPH were reaching
the state of deoxygenation. Superoxide disnmtase did not suppress the OH"
generation while catalase did. The radical production could not be accounted
for the presence of metal ions in buffers. No radicals were detected in
solutions deoxygenated prior the experiments. Similar effects were observed
in case of TrxRs treated by several nitrosylated aromatic compounds including
paraquat and also in case of GR treated by paraquat or DNCB and m case of
xanthine oxidase without additives like DNCB or paraquat and also with
ribofiavin/EDTA oxygen photoreducing system. The results suggest that any
biological or chemical system, which is able to univalently reduce oxygen, is
also able in the absence of Oz to react with hydrogen peroxide giving OH" as
one of the products. The results on OH" production in our experiments may be
responsible lbr the self-deactivalmn of enzymes and necrosis of tissues at
ischaemia.
(We/4.1/045)
(We/4.1/046)
Abstracts FEBS'99
s287
(We/4.1/048)
(We/4.1/049)
(We/4.1/050)
s288
(We/4.1/051)
Abstracts FEBS'99
Glucose-6-phosphatase (G6Pase) catalyses the last step of gluconeogenesis and glycogenolysis, and is therefore a key enzyme in glucose
homeostasis. However, ira complex structure associated to the
endoplasmique reticulum membrane is not yet totally understood.
Recently, the eDNA involved in glycogen storage disease type Ib (GSD
Ib) that encodes a 46 kDa protein (P46), different from P36 the catalytic
subunit, hut that causes, functional deficiency of G6Pase, has been cloned
and different isoforms have been reported. We investigated the topology
of the GSD/b protein with different new predictive algorithms as well as
with specific antibodies raised against selected peptide sequences of the
GSDIb protein. A BLAST analysis of GSDlb proteins generated 14
sequences (score > 80 and p < 10"6) with a low percentage of homology
(less than 30%). A multiple alignment of each sequence with the human
GSDIb protein was performed. We found (!) identical amino acid
conservations in all of the 14 sequences: tyrosine (Y-25 and Y-60), that
could be involved in phosphorylatinn - dephosphorylation regulation ;
charged residues like arginine (R-28), aspartate (13-72 and D-285) or
lysine (K-212), that may he involved in the function(s) of the GSDIb
protein ; tryptophan (W-246) or glyeine (G-281), that are important for the
structure of the core of proteins. (2) The 10 transmemhrane-predicted
segments (TM-predict), proposed by the recent Hofmann's algorithm,
were found to be very similarly in most of the 14 sequences, suggesting a
topology of the GSDIb protein based on 10 TM segments. (3) Three
domains 7300 from 6 to 106, 36 from 108 to 190 and 7243 from 361 to
435 have been defined using the very recent ProDom algorithm, in at least
8 aligned sequences. Furthermore, with the TM-predict algorithm, the N
and C terminal parts of the GSDIb protein are predicted to be located
outside the cytoplasm, e.i. inside the lumen of the ER. Antipeptide
competition ELISA analysis confirmed the non-accessible N-terminal pa~
of the GSD-Ib protein on intact liver mierosomes. A new transmemb~ane
topological model is proposed for the GSD-Ib protein.
(We/4.1/054)
The expression of human prolactin was done in different insect cell lines Sf9,
Sf21 and l-ff using recombinant baculoviruses, eDNA coding human prolactin
was amplified by PCR using primers suitable for gene trimming flanking
sequences the gene in BamH I and Kpn I restriction sites [1]. In these
restriction sites cDNA-prol was
integrated into baculovirus vector
pFastBacHT, carrying the sequence for His-tag (Bac-to-Bae ,,Gibco"). As a
result of the transfection, a recombinant baculovirus HisProt was obtained.
During infection of insect cell lines with the HisProl the highest level of
prolactin biosynthesis was observed in HF cell lineThe amount of the product
was estimated by SDS-polyacrylamide gel electrophoresis. On examination
under the inverted microscope cultures harbouring HisProl were found to
contain large number of inclusion bodies Previously similar structures were
observed for fusion human prolactin expressed in E coli [2] Such aggregates
could be dissolved only in denaturing conditions (6M guanidineHCl/8M urea).
Secretion of prolactin to the medium was possible when recombinant MelProl
vector was used in which cDNA-prol contained mellitin signal sequence in front
of the prolactin sequence (Bac-N-Blue,"tnvitrogen"). The concentration and
immunoreactivity of the prolactin were determined using radioimmunoassay
The amount of prolaetin present in medium was found to be 10 mg/l culture.
[1]Strokovskaya L.I et al., (1997) ProcNatl.AcadSci Ukr.(in Russian) 36,
166-169
[2]Gilbert M.S et al, (1991) Int J Biochem 23, 107-114
Abstracts FEBS'99
s289
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(We/4.1/057)
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s290
(Wed4.1/059)
Abstracts FEBS'99
(We14.1/060)
(We/4.1/061)
[1] Bun-ya, M., Nishimura, M., Harashima, S. and Oshima, Y. (1991) The
PH084 gene of Saccharomyces cerevisiae encodes an inorganic phosphate
transporter, MoL Cell. Biol. 11, 3229-3238.
[2] Martinez, P. and Persson, B.L. (1998) Identification, cloning and
characterization of a derepressible Na+-coupled phosphate transporter in
Saccharomyces cerevisiae, MoL Gen. Genet.248, 628-638.
[3] Bryant, J.B. and Stevens, T.H. (1998) Vacuole biogenesis in
Saccharomyces cerevisiae: Protein transport pathways to the yeast
vacuole, MicrobioL Mol. Biol. Rev., 62,230-247.
(We/4.1/062)
Acetyltransferase
Uridyltransferase
Abstracts FEBS'99
(We/4.1/063)
(We/4.1/065)
s291
(We/4.1/064)
s292
(We/4.1/067)
Abstracts FEBS'99
(We/4.1/068)
(We/4.1/069)
(We/4.1/070)
Abstracts FEBS'99
(We/4.1/071)
s293
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(We/4.1/073)
Globular proteins interact with others by their surface interaction (or binding
sites Since the knowledge of the structure and positioning of the binding sites i
important for understanding the protein function, a careful characterization c
those is essential The interactions between tryptophan-derivatives (tryptophan
methyl, ethyl-, and butyl-ester) and human serum transferrin have been followe,
by capillary_ electrophoresis [1]. Changes in the migration properties of the sma
molecules and stereoselective separation of enantiomers reflected that at leas
one specific binding (interaction) site exists on the surface of the protei
molecules The enantiomers were separated by iron-free transferrin, but simila
phenomenon were not observed with ~t's iron-saturated form For the bette
understanding and characterization of the binding sites we performed a detaile,
study with compute model calculations Here we present the results obtained b
using the Sybyl version 6 5 (Tripos, Inc, USA) software Different 3I
structures of the protein molecules in the transferrin family having iron o
without the metal were used The most successful ,,docking" results with thre
different structures of a recombinant N-terminal (half molecule) of iron-fre
human serum transferrin [2] showed different orientations of the tryptopha
derivatives on the surface of the protein Every docking can be characterized b
an ,,energy value" of the interaction The energy calculations showed that the t
enantiomers of the tryptophan-derivatives have a more stable interactions wit
the transferrin which fitted well with the results obtained by capillar
electrophoresis We assume that the ,,active site" for the stereoselectiv
separation includes the iron binding amino acid residues, but other side chain
may also play important role.
Acknowledgments: The work was supported by grants OTKA T25527 an,
TKT T-08 394/96. The X-ray diffraction data of human serum transferrin wer
kindly obtained from Edward N Baker
(We/4.1/074)
s294
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Abstracts FEBS'99
(We/4.1/076)
Abstracts FEBS'99
s295
the mRNA pattern of various fatty acid utilizing enzymes and proteins.
(We/6.3/079)
promotes
diet is discussed.
s296
(We/6.3/081)
Abstracts FEBS'99
(We/6.3/082)
(We/6.3/083)
(We/6.3/084)
promoter. This sequence is the first described that can regulate a basal
promoter in response to starvation of several individual amino acids. From
these properties, this DNA sequence can be called Amino Acid Response
Element (AARE). In addition, we show that C H O P A A R E sequence binds/n
vitro members of the C/EBP-ATF transcription factors family. Altogether,
(1) Bruhat, A., Jousse, C., Wang, X-Z., Ron, D., Ferrara, M. and
Fafournoux, P. (1997) J. Biol. Chem. 272, 17588-17593.
6-Phospho fructo-2-kinase/fructose-2,6-bisphosphatase
(6-PF-2K/fru-2,6P2ase) is a homodimeric bifunetional enzyme
that catalyzes the synthesis and degradation of fructose-2,6bisphosphate, a key regulator of the glycolysisglueoneogenesis pathway.
We have previously cloned and sequenced a 2527 bp
eDNA that encodes the liver isoform of the bifunetional
enzyme in the teleost fish Sparus aurata; the anfmoacid
sequence deduced from the eloned eDNA corresponds to a 55
kD protein. Besides, the regulation of the expression of this
gene was observed in fish liver alter fasting and refeeding [1].
In vitro transeriptiun/translation of the cloned eDNA
generates a single 55 kD protein, which corresponds to the
molecular weight previously reported for each bifunetional
enzyme subonit purified from the liver o f S p a r u s aurata [2].
The cloned eDNA was expressed in prokaryotie and
eukaryotie systems. Pmkaryotic expression of the enzyme
was achieved in E. coli BL21(DE3) with a T7 RNA
polymerase-depundent system; the fish hepatic isoform of
the enzyme was also expressed by transient transfeetion of
COS-7 cells. In both cases, the protein exhibited ldnase
activity. The fish 6-PF-2K/fru-2,6P2ase was analysed by
Western blot with specific polyelonal antibodies and was also
found to have a molecular weight of 55 kD.
[1]. Met&x,I.; Caseras, A.; Mediavilla, D.; Fecn~indez,F.;
Baanaate, I.V. Bioch. et Biophys. Acta 1999 Feb. 16;
1444 (2): 1-13.
Abstracts FEBS'99
(We/6.3/085)
(We/6.3/087)
2. O. BRAISSANT,F. FOUFELLE, C. SCOTTO, M. DAUt~A & W. WAHLI Endocrinology, 137, 354-366, 1996.
s297
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(We/6.3/088)
Many chemicals accumulated in the environment over the years are now
suspected to have estrogenic actwity Several studies using artificial
reporter systems as well as m vtvo assays support the possible actions of
these xenoestrogens on the development and/or function of the
reproductive systems in animals Often times however, the
concentration of such chemicals in the environment does not appear
compatible with any biological action. Since these effects are
particularly observed after m utero or early age exposures, and since
second messengers seem more and more involved m some estrogenic
responses, we decided to test for possible interactions between the
estrogenic signaling pathway used by these xenoestrogens and those of
growth factor stimulation
We therefore investigated the ability of two insecticides suspected to
have estrogenic activity and persistant in the environment (endosulfan
and chlordane) to affect two estrogen-dependant mechanisms: Using
MCF-7 and GH~ cell lines, we respectively examined the growth or
prolactin (PRL) mRNA levels m these cells after exposure to different
doses of endosulfan and chlordane alone or after IGF-I/EGF
stimulation Using metabolic actwity labeling (MTT) or quantitative
RT-PCR, we observed an increase of growth and PRL mRNA
expression after treatment with different doses of endosulfan or
chlordane. We also observed that such increase was amplified with a
treatment with growth factors.
This study demonstrate that the effects of estrogenic contaminants can
be modulated by the growth status of cultured cells, suggesting that
some interactions exist between estrogen and growth factor signaling
pathways. Furthermore, it suggests that cell systems reflecting the
normal interactions between cell signaling pathways in estrogenresponsive cells is an important complement for the evaluation of
estrogenic activity.
s298
Abstracts FEBS'99
(We/6.3/089)
(We/6.3/090)
Listeria
mono~ytogenes
Listeria
monocytogenes
monocytogenes.
monocytogenes
(We/6.3/091)
Abstracts FEBS'99
(We/6.3/093)
s299
(We/6.3/094)
Laboratoire Glaxo Wellcome, 25, avenue du Qudbec. 91951 Les Ulis France
Smad proteins play a key role in the intracellular signalling of TGF[5. Upon
receptor activation, Smad2 and Smad3 are phosphorylated and form
heteromeric complexes with Smad4. These complexes translocate to the
nucleus where they control expression of target genes. The human
Plasminogen Activator Inhibitor Type-1 (PAl-l) gene is transcriptionnally
regulated by TGF[3. We have identified a Smad3/Smad4 binding sequence,
called the CAGA box, present in three copies in the human PAI-I promoter
and required for TGFl3-induced transcription [1]. This CAGA sequence is
also found in other TGFI3-regulated promoters. Furthermore, this
Smad3/Smad4 binding sequence confers TGFI3 stimulation to a heterologous
promoter. Gel shift experiments indicate that Smad3 and Smad4 binding is
direct. Although it presents an overall 92% identity with Smad3, Smad2 is
functionally different since it does not bind to the CAGA sequence.
Mutagenesis studies have shown that a thirty amino acid domain absent in
Smad3 and corresponding to exon 3 in Smad2 prevents Smad2 from binding
to the Smad3/Smad4 binding sequence [2]. This suggests that Smad2 and
Smad3 may have different subsets of target genes explaining TGFI3
pleiotropic effects. Other transcription factors have been shown to be
regulated by TGFI3. We are currently investigating potential cross-talks
between the transduction pathways involving Smads and some of these
factors.
I- Dennler et al, EMBO J., 17, (1998), 3091
2- Dennler et al, Oncogene, in press
Retinoic acid receptors (RARs and RXRs) form heterodimers and act as
ligand-inducible transcription factors that regulate genes expression.
Previous studies have shown that both heterodimerization partners can
participate to the transcriptional activity of thc RXR-RAR
heterodimer. In this study, we characterize synthetic retinoids that
exhibit potent RAR antagonism but different profiles of RAR-mediated
transactivation in combination with an RXR-selective agonist.Thus we
show that the effect of synthetic RAR retinoids can be restricted to
heterodimer-mediated effects in three ways : (i) some synthetic
retinoids can act as agonist (ii) some RAR antagonists can activate the
heterodimer in association with an RXR agonist (iiil some RAR
antagonists block the heterodimer whatever the ligand-binding status of
RXR. RAR antagonists able to synergize with an RXR agnnists lead to
an inhibition of the MCF-7 human breast cancer cells prnliferatioo, in
combination with an RXR agonist as efficient as an RAR agonist alone,
demonstrating a good correlation between transcriptional results and
proliferation data. Study interaction in the RXR-RAR heterodimer
context show that co-regulators are implicated in the different profiles
of transcriptional effect of antagonists. Moreover proteolysis digestion
of RAR in presence of synthetic retinoids indicates that different
conformations are induced in RAR bF antagonists. The finding that
different RAR-antagonists are able more or less to synergize with RXRselective agonist in the RXR-RAR hctcrodimer context supports the
idea that the RXR-RAR heterodimer exists in a gradual shifting between
repressive and active states which is determined by the RAR ligand.
Such compounds can be used for increasing the understanding of the
mechanism of transcriptional activation and the respective contributions
of the different retinoic receptors in governing the biological effects of
the natural pan-agonist acid retinoic.
(We/6.3/096)
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Abstracts FEBS'99
(We/6.3/099)
(We/6.3/098)
(We/6.3/100)
Estradiol-1713 (E2) can induce c-fos gene expression in breast cancer cell
lines and in the uterus in vivo, but not in cultured guinea-pig endometrial
ceils [ 1]. On the basis of our previous results in this culture model, we have
postulated that a labile repressor could prevent the E2 transcriptional effect on
the guinea-pig c-fos gene [21. The aim of the present study was to investigate
this hypothesis. We thought to determine whether E2 effect is absent on
transfected human c-fos recombinants which are known to be E2-responsive
in cancerous Hela cells. Three h-fos-CAT plasmids were used: pFC1-BL,
pFC2-BL and pFC2E. These plasmids contain different human c-fos gene
regulatory sequences and the human c-fos gene promoter inserted upstream
of the CAT gene: pFCI -BL contains c-fos sequences ranging from -2250 to
+41, pFC2-BL the sequences ranging from -1400 to +41 and pFC2E the
sequences from -1300 to -1050 and from -230 to +41. All these
recombinants bear the c-fos estrogen response element (ERE, -1200).
Stromal (SC) and glandular epithelial cells (GEC) were transfected with a hfos-CAT plasnlid and a control [3-galactosidase plasmid 13] and then,
incubated in chemically defined medium with or without the appropriate
stimulus (I0 -8 M E2, 100 ng/ml EGF, I0 ~g/ml insulin, 10 -7 M ICI
182,780, alone or in association). In both cellular types, pFCI-BL was not
induced by E2, even in the presence of growth factors. The lack of E2 effect
was not due to unfunctional endogenous estrogen receptors since an EREwttk-CAT plasmid, containing the ERE from vitellogenin A2 gene, was induced
by E2 in both cell types. The pattern of pFC2-BL and pFC2E expression
was strikingly different and depended on the cellular type: pFC2-BL and
pFC2E induction was restricted to GEC and did not occur in the SC. We
argue for a repression of E2 action which is dependent on the ERE
environment and also cell type-specific involving DNA/protein interactions
with cellular type-specific factors.
I I I M. Jouvenot et al., Mol. Cell. Endocrinol., 72, (1990) 149
I2I I. Pellerin et al., Endocrinology, 131, (1992) 1094
13I I. Lascombe et al., Biotechniques, 20, (1995) 88
Abstracts FEBS' 99
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s301
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The HKE4 gene lies on the centromeric side of the HLA class 1I
region, on the short arm of chromosome 6 at 6p21 3, and encodes a
transmembrane protein with two histidine-rich charge clusters. In the
mouse, it has been shown that the KE4 and retinoid X receptor beta
genes are tightly linked, only separated by a CpG-rich island that
works as a bi-direetional promoter. Here we describe the molecular
cloning and characterization of the HKE4 Y-flanking region. As in the
mouse, the region has a high GC content, lacks obvious TATA box,
and contains numerous putative binding sites for the transcription
factor Spl The CAP site was mapped in primer extension
experiments, and several transcription initiation nucleotides were
identified. To determine whether this region has functional promoter
activity luciferase reporter plasmids, constructed with restriction
fragments and deletion fragments, were transiently transfected into
HeLa and CV-1 cells. Transcription activity was observed for
constructs carrying either of the two possible orientations. Deletion of
a single Spl binding site caused considerable loss of transcription
activity in both directions, suggesting that this site is important for
promoter activity.
selectivity. Our high resolution data provide structural details of the ligand
binding pocket, which are important for the reliability of structure based
drug design of retinoids, hopefully less prone to side-effects.
B. P. Klaholz, J.-P. Renaud, A. Mitschler, C. Zusi, P. Chambon, H.
Gronemeyer, D. Moras; Conformational adaptation of agonists to the human
nuclear receptor RART. Nat. Struct. Biol. 1998, 5, 199-202.
(We/6.3/104)
Peroxisome Proliferator Activated Receptor y2 (PPAR',(2) is a nuclear, liganddependent transcription factor responding to thiazolidinediones (antidiabetic
drugs) and the natural ligand 15-deoxy-A ~2'~4prostaglandin Jv PPAR',/2 is
predominantly expressed in adipose tissue, both white and brown. PPARy'2
together with C/EBPcc is important for the initiation of differentiation of
white adipocytes [1]. When mice are exposed to cold, brown adipose tissue
becomes activated and starts to generate heat. It is the unique and tissuespecific protein UCP1 that is responsible for this mechanism. This activation
is mediated by the endogenous neurotransmitter norepinephrine which is
released upon cold exposure. Both cold exposure and norepinephrine
treatment induce an increase m UCP1 mRNA levels and elevate UCP1
protein content. Treatment with the PPARy2-1igand pioglitazone induces an
increase of brown adipose tissue mass, mRNA levels of UCP1 and UCPI
protein content m mice [2]. Sears et al. [3] showed that PPAR)'2 binds to the
UCP1 enhancer, from which it can activate transcription. PPAR'(2 has been
suggested as the master controller of several fat specific genes and of
adipocyte differentation. However, we show in this study that mice exposed
to cold show no changes m mRNA levels of PPARy2. In primary cultures of
brown adipocytes PPARy2 is spontaneously expressed and the differentiation
process only marginally alters the mRNA level. Norepinephrine treatment of
primary cultures of brown adipocytes induced a dose-dependent decrease in
the PPARy2 mRNA level. The ECs0 value was calculated to 0.1 ~M and
maximal decreasing effect was reached with I p,M norepinephrme. The
influence of norepinephrine in decreasing PPARy2 mRNA levels is observed
after 1 hour and reaches its maximal at 2-4 hours (40% of control). The
decrease in PPART2 mRNA levels is transient and the level is back to control
levels after 21 hours. The effect of norepinephrine on coactivators of PPARy'2
has also been investigated. Based on these investigations the significance of
PPARy2 for norepinephrine dlfferentation is discussed.
References: [1]: Tontonoz et al., Cell, 79, (1994) 1147, [2]: Foellml-Adams
et al., Biochem, 52, (1996) 693.,[3}: Sears et al,. Mol Chem Biol, 16, (1996)
~410
s302
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(We/6.3/108)
Abstracts FEBS'99
s303
(We/6.3/l10) A n g i o t e n s i n o g e n
deficient
mice
exhibit
alterations in adipose tissue development
F. Massiera l, K. Murakami 2, A. Fukamizu 2, R.
Negrel 1, G. Ailhaud 1 and M. Teboul 1'
1 UMR CNRS 6543, Nice,France 2 Unlversa3' of Tsukuba, Japan
(We/6.3/lll)
Glutamine has been shown to up-regulate the expression of the ~2macroglobulin (oc2M) gene, at least in part, through the glutamineinduced cell swelling [1]. Since cell swelling per se stimulated the ot2M
gene transcription [2], the aim of this work was to test the possibility
that the transcription factors STAT might be involved in the effect of
cell swelling in cultured rat hepatocytes.
Cell swelling induced by hypoosmolarity (-50 mM NaCI) activated
STAT3/3- and STAT3/1 dimers but not STAT1/I homodimers.
Maximal activation was observed after 60 min of culture (x6, STAT3/3 ;
x3, STAT3/3 , n = 3). Similar results were obtained by culturing the
cells in the presence of 100 U/ml interleukin-6, the major known inducer
of o~2M gene. This strongly suggested that hypoosmolarity induced the
expression of the o~2M gene through the activation of STAT proteins.
The effect observed in hypoosmotic condition was due to cell swelling
since (i) raffinose addition totally blocked the activating effect of
hypoosmolarity on STAT proteins and (ii) the culture of cells in the
presence of 10 mM 2-aminoisobutyric acid also activated STAT3/3- and
STAT3/1 dimers. By contrast, we were unable to detect any activation
of STAT4-, STAT5- and STAT6 proteins. Thus, cell swelling
specifically activated STAT1 and STAT3 proteins as homodimer 3/3 and
heterodimer 1/3 in primary rat hepatocytes.
[1] A. Lavoinne et al. Biochimie 80, (1998) 807.
[2] D. Meisse et al. FEBS Lett. 422, (1998) 346.
(We/6.3/112)
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Abstracts FEBS'99
6-phosphofructo-2-kinase/fructose-2,6-biphosphat ase (PFK2/FBPase-2) catalyzes the synthesis and the breakdown of fructose
2,6-bisphosphate The bifunctional enzyme is regulated by different
effectors, covalent modification as well as by the control of its
expression. Several isozymes and different mRNAs coding for the
PFK-2/FBPase-2 have been described in humans Complete cDNA
human sequences are available for heart, liver, muscle, testis and
brain lsoforms.
We have recently reported the complete human cDNA
sequence for the PFK-2/FBPase-2 brain isoform The results obtained
by fluorescence in situ hybridization (FISH) showed that this gene
maps in the short arm of human chromosome l 0, at p 14-p 15, which is
found to be different from the other genes localized until now. On the
other hand, Northern blot analysis showed the expression of this
isoenzyme in the different human tissues studied
Furthermore, the expression of this ubiquitous PFK-2/FBPase2 has been analyzed by Northern blotting in different proliferative cell
lines (HT29, MCF7, HeLa, NP29 and NP9). The results obtained
show that all these cell lines express ubiquitous PFK-2/FBPase-2
mRNA The incubation of HT29 cells in the presence of lpM insulin
or I00 ng/ml of PDB (Phorbol 12,13-Dibutyrate) increase the levels
of the mRNA of this isoform and also Fru-2,6P2 concentration. These
changes are followed by increases in lactate production.
Ubiquitous PFK-2/FBPase-2 isozyme contains a significantly
high kinase/phosphatase activity ratio which points out an important
role of this isoform in the control of glycolysis of the proliferative
cells The characterization of the promoter region of this isozyme as
well as the study of the factors involved in its regulation may
contribute to elucidate the role of this enzyme in proliferative tissues.
(We/6.3/114)
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Abstracts FEBS'99
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s305
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(We/6.3/120)
s306
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Abstracts FEBS'99
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(We/6.3/123)
(We/6.3/124)
I.Ivet?~ool(:mversm, l'2nglwld
Abstracts FEBS'99
s307
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(We/6.3/127)
The pancreatic gland, by its dual function may be involved in many metabolic
processes and an increasing number of works deal with transgenic and/or
knock-out mice; yet little is known on the mouse pancreatic genes and the
corresponding proteins. Some reports have shown a differential pancreatic
behaviour between male and female mice in experimental pancreatitis or
diabetes. Therefore, after the characterization of some mouse pancreatic
exocrine proteins, we compared the levels of pancreatic genes expression and
of the corresponding proteins in male and female mice. The pancreas were
independently studied by dot-blot hybridization. A difference was observed in
the expression of four pancreatic genes. Amylase gene expression was
significantly higher in females than in males whereas trypsinogen and lipase
gene expression were significantly lower. For chymotrypsinogen, the
difference was not significant. These results contrast with those found in rat
pancreas where no differences were observed between females and males in
the levels of pancreatic enzymes mRNAs. If we compare the levels of the four
corresponding enzymes expressed in female and male mice pancreatic
homogenates using slot-blot and antibodies directed to the closely related
human pancreatic enzymes, no signficant difference was observed between the
levels of protein expression. These data show a sexual difference in mice at the
level of pancreatic genes expression but not in proteins expression. They
suggest a difference in the regulation of the pancreatic proteins at the
transcriptional level. This sexual dimorphism calls into question the role of sex
hormones in the mice pancreas.
(We/6.3/128)
s308
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Abstracts FEBS'99
(We/6.3/130)
~pto
(Wd6.3/131)
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For the efficient induction of the expression of the [3-casein gene the
functional interaction between the glucocorticoid receptor (GR) and the
signal transducer and activator of transcription 5 (Stat5) is required.
ha this work we determined the functional effect of defined domains of GR
on the synergism with Stat5A. A panel of mutated constructs of GR was
transiently co-transfected with Stat5A employing CVI cells and the effect
on the expression of a J3-casein gene promoter luciferase reporter gene was
measured. The responsiveness of the MMTV promoter to the effect of
mutated GR in the absence of Stat5A was tested in comparison to the 13casein gene promoter. We found that the pattern of effects caused by the
mutations was similar between the two promoters: Deletion of the DNA
binding domain (DBD) and amino acid changes in the extended region of
the first zinc finger, in the D-loop and in the distal part of the second zinc
finger of the DBD resulted in a complete or partial loss of transactivation
suggesting that the integrity of various parts of DBD are prerequisites for the
synergistical expression of the [3-casein gene, Deletion of the transactivation
domain zl resulted in a decrease of transaetivation. We conclude that an
intact GR is required for both the synergistical transactivation of the [3casein promoter together with Stat5A and the activation of the MMTV
promoter. One different property of GR in combination with Stat5A is its
response to RU486. There RU486 acts as a partial agonist in the activation
of [3-casein gene transcription, whereas without Stat5A it acts fully
antagonistic on the MMTV promoter. Stat5A apears to alter the balance
between corepressor and coactivator bound to the GR-RU486 complex.
Abstracts FEBS'99
s309
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(We/8.3/136)
Abstracts FEBS'99
s309
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(We/8.3/135)
(We/8.3/136)
s310
Abstracts FEBS'99
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(WedS.3/138)
(We/8.3/139)
(We/8.3/140)
Abstracts FEBS'99
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s311
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s312
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Abstracts FEBS'99
Despite a larger genome than other mitochondria, plant mitochondria still only
code for a few of their own proteins. The aminoacyl-tRNA synthetases
(aaRSs), key components in protein synthesis, make up some of the numerous
proteins encoded by the nucleus and imported into mitochondria. Interestingly,
the aaRSs in plant mitochondria can have different phylogenetic origins: in
Arabidopsis thaliana mitochondria, three examples are representative of this
variety: alanyl-tRNA synthetase is cytosolic-like, asparaginyl-tRNA synthetase
is chloroplastic-like and cysteinyl-tRNA synthetase is mitochondrial-like. For
more details, see the taaRSAt database developed by I. Small and co-workers
(abstract and poster).
Not only the aaRSs are imported but also some tRNAs. It has been shown that
all plant mitochondria tested import tRNAs, and the subset that is imported
varies between plants [1]. We hypothesise that aaRSs could be implicated in the
import of their cognate tRNA into the mitochondria. There is some evidence for
this fi'om both yeast [2] and plants [3]. Indeed, when imported tRNAs and the
corresponding aaRSs are both of cytosolic origin (which is generally the case in
plants) it is even possible that the two molecules are co-Emported via the protein
import channel. A general involvement of aaRSs in deterreming the specificity
of mitochnndnal tRNA import Is consistent with aminoacylation data. For
example, in sunflower mitochondria, which import tRNA "" . the scryl-tRNA
synthetase activity is indistinguishable fi'ore the cytosolic achvilv, wherea', in
plant nfitochondria that do not import tRNA" the cylosolic and reltochondrutl
SerRS activities are clearly different.
We would like to try and obtain direct evidence lor the role of the aaRS in tRNA
impor! mto mitochondria. Rice mitochondria do not 1report tRNA'"', whereas
wheat mnochondrla do [I]. To verify if wheat histidyl-tRNA synthetase is
controlling this import, we are analysing transgemc rice plants expressing wheat
HisRSs.
If we succeed in transfen'ing tRNA import specificity from one plant to
another, we hope to widen our research to include studms on the maport
mechanism itself and the possibihties for deliberate modification of
reitochondriat gene expression.
[1] Kumar el al., Mol. Gen. Genet., 252, (1996) 404.
[2] Tarassov et al., EMBO J., 14, (1995) 3461.
[31 Dietrich et al., Plant J., 10, (1996) 913.
(We/8.3/146)
Abstracts FEBS'99
s313
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The low affinity neurotrophin receptor (p75 ~ ) was the first member cloned
of a large superfamily of receptors containing a series of cysteine-rich
extraceUular repeat domains. Signaling via this family of receptors can elicit
both survival and death responses in target cells depending upon the context.
Members of the p75S~rt/TNF receptor superfamily occur in both soluble and
membrane-associated forms. Soluble p75 NTRcan be isolated from human
urine, plasma, and amniotic fluid, and its production also appears to be
developmentally regulated [1,2]. In order to address the hypothesis that
soluble forms of the p75 NrR may modulate cell signaling, we have used the
human p75 NTRectodomain as an affinity probe in frozen sections of embryonic
chicken [3]. We observe highly specific staining of sensory and sympathetic
tissues and skeletal muscle precursors, all of which normally express p75 NTR
holoreceptor. We hypothesize that soluble forms of the p75 NrR may interact
with endogenous p75 NrR at the cell surface and modulate cell signaling.
[1] DiStefano, P.S. and Johnson, E.M. (1988) PNAS 85,270.
[2] Zupan, A.A. et al. (1989) J. Biol. Chem. 264, 11714.
[3] Chapman, B.S. et al. (1996) J. Neurochem. 66, 1707.
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s314
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Abstracts FEBS'99
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(We/13.4/155)
Abstracts FEBS'99
(We/13.4/156)
(We/13.4/157)
Background.:
Nerve growth factor (NGFR) has been localized in Sertoli cells, in its
apical part facing the lumen and in the basal part [1]. B-NGF is produced
by germ ceils and stimulates androgen-binding protein (ABP) mRNA
[2] The expression of NGFR mRNA and protein showed maximal levels
at stages VII and VIII of the seminiferous cycle when ABP secretion is
increased at maximal level.
ABP is thought to have a paracrine role within the seminiferous tubule on
germ ceils and an autocrine role as well[3]
Aim and d e ~ n
Our aim was to check whether the presence of germ cells or the presence
of ABP was responsible for the induction of NGFR in Sertoli cells.
The experimental design was to compare, using immunocytochemical
procedures, the Sertoli cell NGFR expression in vitro in the absence of
germ cells in 1) mouse Sertoli cells non-producing ABP, 2) Sertoli cells
producing ABP under FSH stimulation, 3) rat ABP-transfected mouse
Sertoli cells producing recombinant rat ABP.
Non testicular Chinese hamster ovary cells (CHO) producing recombinant
rat ABP were used as controls.
Results:
There was significant difference between the undetectable levels of NGFR
in Sertoli cells producing noABP, a low level in FSH-stimulated Sertoli
cells, while Sertoli cells producing rat ABP showed significantly high
levels ofNGFR. CHO cells did not exhibited any labeling.
The NGFR level was positively correlated with the amount of the
recombinant protein in the culture medium.
From these results, we conclude that NGFR is expressed in Sertoli cells in
the complete absence of germ cells. The expression of NGFR needs the
presence of ABP. High concentration ofintracytoplasmic ABP in Sertoli
cells is correlated with high NGFR expression even in the absence of FSH
stimulation.
[11 Parvinen et al, J Celt Biol, 1992,117, 629;
[2] Lonnerberg et al, Biol Reprod, 1992, 47, 381;
[3] Gerard, J Steroid Biochem Mol Blot, 1995, 53, 533.
(We/13.4/158)
s315
The Hepmocyte Growth Factor (HGF) receptor, encoded by the M E T proto-oncogene, regulates various cellular responses including cell
proliferation, morphology, motility, invasion and survival. Tyrosine
kinase receptor signaling occurs through the recruitment of signalling
molecules to the receptor upon receptor autophosphorylation on specific
tyrosine residues. However. other proteins can interact with the receptor
before its activation and the formation of the signaling complex with SH2
and PTB proteins. They may include proteins with functions in the control
of receptor localization and activity, scaffold proteins required to
assemble components of specific signal transduction cascades, or
signaling molecules that are released from the receptor after activation.
We used the interaction trap system to isolate target proteins that interact
with the not-activated intracellular portion of the HGF-receptor.
We isolated and cloned from a HeLa library the cDNA encoding an
isoform of the previously identified FKBP-associated protein, FAP48.
The interaction of this variant FKBP-associated protein, designated
FAP68. with the not-activated HGF-R has been mapped in the C-terminal
tail of the receptor, downstream the multifunctinal docking site y1349_
yt356. In vivo and in vitro experiments show that the interaction
specifically occurs with the not-activated receptor, suggesting a
mechanism by which FAP68 is released from the receptor after activation
by its ligand. This interaction may unveil a novel mechanism of signal
trasduction activation.
s316
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signaling.
We
found
that
ShcA
overexpression
Abstracts FEBS'99
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s3 1 7
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Our previous studies have shown that in guinea pig airway smooth
muscle (ASM), the lysolipid sphingosine-1 phosphate (SIP) potentiated
platelet derived growth factor (PDGF) induced DNA synthesis and so
acted as a co-mitogen. This is consistent with our observation that SIP
increased p42/p44 mitogen activated protein kinase (MAPK) which is
linked to DNA synthesis. Futhermore, the SIP dependent activation of
MAPK is sensitive to pertussis toxin (used to inactivate inhibitory Gproteins or Gi). This suggests that SIP acts through an extracellular
receptor coupled to Gi. Recently a family of G-protein coupled
receptors (GPCRs) activated by SIP and related lipids, known as EDG
(endothelial differentiation gene family including EDG1, EDG2/vzgl,
ARG16/H218 and EDG3) have been cloned.
We now demonstrate by RT-PCR using specific primers that ASM
contain EDG1 transcripts. Further experiments to characterise the
mechanism by which SIP activates MAPK are also presented. S1P
dependent activation of MAPK was blocked by PP1 (a c-Src tyrosine
kinase selective inhibitor) and to wortmannin and LY294002 (which are
structurally unrelated phosphoinositide 3-kinase or PI3K inhibitors.
The former observation was confirmed when S 1P was found to increase
cellular c-Src activity (as measured by phosphorylation of acid
denatured enolase in c-Src immunoprecipitates) in a pertussis sensitive
manner. A role for PI3K was also confirmed as SIP increased PI3K
activity in Grb-2 (guanine nucleotide releasing binding protein)
immunoprecipitates in a pertussis sensitive manner. This is significant
as Grb-2 is an intermediate in the MAPK cascade. Additionally SIP
stimulation tyrosine phosphorylation of a 100 kD protein bound to Grb2 and this was sensitive to pertussis toxin.
Thus our findings are consistent with a model where SIP binds cell
surface EDG1 to activate the MAPK cascade. Other studies have
shown that lysophosphatidic acid (LPA) binds EDG2 to activate c-Src,
PI3K, tyrosine phosphorylated plO0 and MAPK. This suggests a
common signalling pathway used by EDG receptors activated by
different lysolipids.
(We/13.4/167)
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Abstracts FEBS'99
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(We/13.4/174)
References
[l]. Yang, EB, etal. BBRC, 245, (1998) 435
[2] Yang, EB, et aL BBRC, 224, (1996) 309.
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s320
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(We/15.1/179)
Self-Incompatibility (SI) in Brassica oleracea is a process which blocks selfpollen growth on the stigma (the surface of the pistil receptive to pollen).
This process is controlled by a single, highly polymorphic locus, the S locus
(S for Self-incompatibility), and self-pollen is rejected when the same S
alleles are expressed both in the stigma and pollen. In the stigma, the S locus
encodes a membrane spanning receptor-like ldnase, SRK (for S-locus
Receptor kinase) which is thought to be involved in self pollen recognition.
The kinase domain of SRK exhibits a Ser/Thr ldnase activity in vitro when
expressed in F~coli, and plants defective for this receptor have been shown
to be self-compatible. Current models propose that SRK interacts with a
self-pollen borne signal, not yet identified, and Iriggers the SI response via a
dimerisation process [1].
In order to obtain more information about the mode of action of SRK
during self-pollination, we expressed different forms of the SRK protein in a
membraneous environment, using the baculovims-insect cell system. In
microsomes, recombinant forms of SRK were found to autophosphorylate
on serine and threonine residues. Surprisingly, this phospborylation was
constitutive, as it happened in the absence of pollen or stigma extracts.
Phosphorylation was shown to occur in trans which strongly suggests the
existence of homo-oligomers of recombinant SRK proteins in insect cells. To
investigate the physiological relevance of these results, in planta studies are
in progress in our laboratory.
[1] McCormick S., Cur. Op. Plant. Biol. 1, (1998) 18
Abstracts FEBS'99
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Abstracts FEBS'99
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s323
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The effect of vessels' volumes (100, 200 and 300 ml) on the growth
characteristics of a suspension culture was determined. The suspensions were
obtained from callus initiated from immature embryos of three winter wheat
cultivars. Several culture parameters (settled and packed cell volume, fresh
and dry weight and cells viability) were monitored during a 30-day period.
Also some factors of culture medium as: pH, conductivity and osmolarity
were evaluated. The significant correlation between settled and packed cell
volume and fresh and dry weight was found for all examined cultivars.
Moreover, the viability of suspensions correlated with its fresh and dry weight
and the medium conductivity correlated with its osmolarity. The kinetic of
growth in two out of three studied suspensions was similar. The most visible
changes in the majority of parameters were noted between 10th and 16th days
of culture. The conductivity and osmolarity increased from 10th up to 30 th
days of culture. Viability reached the maximum in the 10th day of culture.
Generally, the volume of culture vessel did not influenced significantly the
growth of the wheat suspension culture.
This study was supported by The Polish Commtttee for Scientific Research, Grant No. 5 PO6A
021 15
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(We/15.1/191)
the
Czech
Republic,
project
s324
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Abstracts FEBS'99
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The phenotypic fidelity of oil palm (Elaeis guineensis Jacq.) clonal plantlets
depends on the type of embryogenic callus lines used for micropropagation [1].
Regenerants originating from Nodular Compact Calli (NCC) have been shown
to exhibit t h e , mantled )> variant phenotype, which shows changes in the floral
architecture, at an average level of 5%, whereas this rate has been found to be
100% for plantlets regenerated from Fast Growing Calli (FGC). In order to
characterise epigenetic mechanisms underlying oil palm somaclonal variation,
global levels of genomie DNA methylation and regulation of signalling
pathways were investigated in both types of embryogeulc cam.
Levels of global DNA methylation were estimated by HPLC quantification of
5mdC after enzymatic hydrolysis of genomic DNA. The Sssl Methylase
Accepting Assay was also used. We measured a significant hypomethylation in
FGC (23.2 % vs. 18.7%) as compared with NCC from the same origin.
The expression of major signalling pathway elements, together with NDPK, a
key enzyme of cellular energy transfer, were analysed through enzyme assay and
Western blots using specific antibodies [2]. In FGC cells, an over-expression of
elements from the MAPK (ras and ERK) and PKC pathways was demonstrated.
In addition, the expression of G-proteins, NDPK and PLC were detected at
comparable levels in both types of plant material. The presence of two very
distinct isoforms of PEPC which were specific to FGC suggest a role for PEPC
as a target protein for proteolytic events that may occur in this highly
proliferative cell line.
Our studies of the differential activation of plant signalling pathways and
genomic DNA methylation in normal and variant cells is part of an integrative
approach to investigating the responses of plants to tissue culture, which is
considered to constitute an environmental stress.
Since it was previously demonstrated [3] that no significant amounts of
cytokinins could be detected in FGC whereas they accumulated in NCC, the
possible role of cytokimns in the MAPK-type phosphorylation signalling
cascades and the subsequent modulation of genome expression potentially
leading to somaclonal variation phenomena is discussed.
[1] Rival (1999) In : Somatic Emb. in Woody Plants, 6. Jain S.M. (ed), Kluwer Acad Publ
[2] Nato et al (1998) Plant Physiol., 113, 801
[3] Besse et al (1992) J Exp Bot., 252, 98.
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References:
[1] Unger et al., J. Bacteriol., 164, (1985) 723.
[2] Otten and Schmidt, M.P.M.I., l l, (1998) 335.
Abstracts FEBS'99
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s325
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The plant hormone ethylene has been shown to reduce wood formation,
specific changes in genetic expression and to elicit many physiological
responses. The purpose of this work is to describe the enzyme activities
involved in the biosynthesis and regulation of the ethylene precursor 1aminocyclopropane-l-carboxylic acid (ACC) during dormancy and growth
in the cambial region of Scots pine. Ethylene, ACC and its conjugates were
determined in cambial region of one-year old shoots of 10 year-old pine
trees growing in South Sweden. HPLC and quantitative analysis on GS-MS
were used to measure the amount of ACC and ACC cor(jugates after
purification. The analysis of ACC oxidase, ACC synthase and ACC Nmalonyltransferase activity was performed in crude protein extract and
ethylene evolution was detected using GC.
ACC synthase catalyses the conversion of S-adenosyl-L-methionine (SAM)
to ACC and 5'-methylthioadenosine (MTA) and plays a key role in
regulating the ethylene production. An oxidative enzyme, ACC oxidase,
carries out the conversion of ACC to ethylene. The N-malonylation of ACC
is provided by the malonyltransferase enzyme, preventing overproduction of
ethylene. Ethylene in the camblal region exhibits a seasonal variation with a
maximal concentration in July. The levels of ACC in the cambial region are
very low, compared to ACC conjugates. The level of ACC conjugates does
not display seasonal variation and is constant around the year. ACC
synthase and ACC N-malonyltransferase are the key enzymes providing the
regulatory mechanism for limiting ethylene production.
s326
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s327
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Oncostatin M induces cell-cycle arrest in human glioma cells
through inhibition of p27 K'p~degradation
M. Friedrich, R. Laumann,F. StOgbauer,E. B. Ringelstein, and H. Halfter
Chnicof Neurology, Universityof Muenster, 48149Muenster,Germany
The interplay between the actin cytoskeleton and the stressresponse pathway JNK/SAPK has been emerging in the last few years
with the characterisation of the dualistic role of racl and cdc42, two
members of the Rho-family of GTP-binding proteins. Moreover, we
have recently shown in our laboratory that although JNK/SAPK
pathway was down in confluent fibroblasts, such an inhibition could be
abolished by adding a drug that depolymerises actin. Recently, two
proteins of the focal adhesions complexes, pl30Cas and Crk II, have
been implicated in YNK/SAPK activation upstream of rac 1[1 ]. We have
shown that J'NK1 interacts directly with Crk II in vitro and in vivo in
HeLa cells. Moreover, this association is regulated by growth factors but
is insensitive to UVC irradiation. We also show that Crk II major site of
tyrosine-phosphorylation is necessary to regulate Crk II / JNK1
interaction. Thus, we propose a role for Crk 1I in the regulation of
growth factors-induced activation of the JNK/SAPK pathway.
[1] F. Dolfi et al., J. Biol. Chem., Vol. 95, (1998) pp15394
(We/3.2/205)
transcriptional target of the AP-I transcription factor components Jan and Fos.
The complete structural organisation of the quail BKJ gene was determined by
nucleotide sequence analysis and transcriptional mapping. The B K J promoter
region contains two authentic AP-1 binding sites. By transactivation of reporter
gene constructs and direct binding of Jan recombinant protein, the proximal
AP-1 element was shown to be essential for B K J promoter activation. The
activation of BKJ in jun-transformed avian fibroblasts was also demonstrated at
the protein level. B K J is a novel gene related to the avian ]3-keratin gene family
whose members display highly specific expression patterns during
embryogenesis and epidermal development. In contrast to BKJ, the other gene,
termed JAC, was found to be specifically induced in jun- but not in fostransformed fibroblasts suggesting that its activation does not require a Jun/Fos
heterodimer. JAC encodes a putative 155 amino acid protein with distinct
sequence motifs characteristic for transcription factors but with no homology to
known sequences. Ectopic activation of these genes in fibroblasts by deregulated
jun may contribute to cell transformation.
[1] Hartl, M., and Bister, K. Proc. Natl. Acad. Sci. USA 92 (1995) 1173111735.
[2] Hartl, M., and Bister, K. Oncogene 17 (1998) 2901-2913.
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s330
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Abstracts FEBS'99
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TETRACYCLINE-INDUCIBLEEXPRESSION OF TUMOR
SUPPRESSOR CANDIDATE GENES.
A. Protopopov, V. Kashuba, G. Winberg, E. Zabarovsky
MTC, Karolinska Instttute, Stockholm, Sweden
These functional test and high resolution maps will prove crucial in the
identification of the RCC and lung cancer TSG(s).
The aim of the study was to investigate p53 protein expression by the
Western blotting technique (estimated by Integrated Optical Density1OD) in normal (n=13) and neoplastic (n=40) human endometrial
tissues as well as in a case of uterine carcinosarcoma and in a specimen
of the botryoid sarcoma of the uterine cervix, p53 protein levels were
correlated with patients' age as well as with conventionally used
clinicopathological features of the endometrial neoplasm. A
statisticallly significant difference was noted in p53 levels in the
nuclear, but not the cytoplasmatic, fraction between the normal
endometria and endometrial cancer tissues (p<0.0001). In the
neoplastic endometria, nuclear p53 protein expression was higher than
in cytoplasmatic fraction, and the difference was significant (p<0.05).
Higher nuclear p53 protein levels correlated with advanced histological
grading of endometrioid endometrial carcinomas, but no relationship
was noted between p53 protein expression and patients" age, clinical
stage, histological type or depth of myometrial invasion. A case of
uterine carcinosarcoma and a specimen of a botryoid sarcoma of the
uterine cervix expressed nuclear p53 oncoprotein (57 IOD and 89 IOD,
respectively). In conclusion, we found a statistically higher nuclear p53
levels in malignant as compared to normal human endometfial
specimens by the Western blotting technique. Although there were no
significant differences between p53 expression and clinicopathological
features of the neoplasm (except poor histological grading), further
studies are necessaly to evaluate the influence of p53
nuclear/c3oplasmatic levels on the clinical outcome of Polish patients
suffering from endometrial cancer.
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Abstracts FEBS'99
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Sp3 and Sp4 are members of the Spl (Specific protein 1) family of transcription
factors. Spl, Sp3, and Sp4 are closely related and share similar functional
domains. Spl and Sp4 are mainly known as transcriptional activators, whereas
Sp3 can also repress transcription via a repressor domain that occurs in this
family member only. The three zinc finger motifs of Sp 1, Sp3 and Sp4 bind GT
and GC boxes with identical affinities. These binding sites are found in
numerous enhancer and promoter regions of tissue specific and ubiquitous genes
(e.g. in the 13-globin LCR). Like Spl, Sp3 is ubiquitously expressed, whereas
Sp4 is abundant in adult brain but barely detectable in other tissues. To
investigate the functional properties of Sp3 and Sp4, knockout mice were
generated by homologous recombination.
Targeted deletion of the zinc finger region of Sp4 revealed that this transcription
factor is required for normal marine growth, viability and male sexual behaviour
[1]. This is largely confirmed by the results obtained from our Sp4 knockout
mice.
Sp3 appears to be indispensable for neonatal survival, since Sp3 knockout mice
die soon after birth. Caesarean sections at 18.5 days of gestation (E18.5) revealed
that they are not able to breathe and survive only for 20 minutes. This breathing
inability might be due to a general delay in development during the last day(s)
of gestation. The Sp3-/- neonates are approximately 30% smaller than their
littcrmates, but otherwise there are no gross morphological abnormalities.
Currently, we are looking for target genes of Sp3 that might explain the
phenotype. For this purpose, mRNA from Sp3-/- and +/+ ES cells and total
embryos has been used to screen cDNA arrays. Also, differentially expressed
total embryo mRNA has been selectively amplified, using the SABRE protocol
[2].
[1] Supp et al., Dev.Biol., 176, (1996) 284.
[2] Lavery et al., Proc.Natl.Acad.Sci.U.S.A., 95, (1997) 6831.
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Abstracts FEBS'99
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HIV replicates more efficiently in activated cells and viral levels consistently
increase when the immune system of infected individuals is activated by
exogenous stimuli such as opportunistic infections. This increase in the rate of
viral replication is associatedwith cellular activation and expression of HIV
inducing cytokines/chemokines, as well as an acceleration m the course of
HIV-induced disease. The effects of HIV stimulating cytokines are
counterbalanced bythose that suppress HIV replication, inhibitory cvtokines
include IFNet, IFN13, IL-10 and the chemokmes RANTES, M'IP][-et, and
MIPl-13. Activation of the Interferon Regulatory Factors (IRF) in turn are
critical mediators of cytokine gene transcnptlon,Recent studies have focused
on the 55kDa IRF-3gene product as a direct transcriptional regulator of type I
interferon (IFNct and IFNI5) activation in response to virus infection. Infection
by many types of viruses (HIV, paramyxovirus and herpes) induces
phosphorylation of IRF-3 on specific C-terminal serine residues and permits
cytoplasmic to nuclear translocation of IRF-3, activation of DNA binding and
transactivation potential, and association with the CBP/p300 co-activator.
Phosphorylation also facilitates dimerization of IRF-3 proteins. We previousiy
generated constitutively active [IRF-3(5D)] and dominant negative (AN) forms
of IRF-3 tlaat control IFNI5 and IFNct gene expression. In an effort to
characterize the range of immunoregulatory genes controlled by IRF-3, we
now demonstrate that endogenous human RANTES gene transcription is
directly induced in tetracycline-inducible IRF-3(5D) expressing cells or virusinfected cells. We also show that a dominant-negative IRF-3 mutant inhibits
virus-induced expression of the RANTES promoter. Specific mutagenesis of
overlapping ISRE-like sites located between nt -123 and -96 in the RANTES
promoter reduces virus-induced and IRF-3 dependent activation. T h e
realization that IRF-3 regulates CC-chemokine RANTES suggests that it may
play a role in HIV-1 patho.genesis, particularly with regard to chemokine
activation and virus multiplication. The influence of IRF-3 activation and
RANTES expression on HIV-1 replication is currently being investigated in
HIV-infectedmyeloid cells stably transduced with different forms of IRF-3 by
retroviral gene transfer.
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The human gene for the ct3 subunit of the neuronal nicotinic acetylcholine
receptor is controlled by a TATA-Iess, CAAT-less multistart promoter,
similarly to other neuron-specific genes. We've funtionally mapped the ct3
minimal promoter to a 60 bp sequence, 190 bp upstream the start codon.
This sequence is highly GC-rich and contains several putative Spl and AP2
binding sites. The activity of the ct3 minimal promoter was found to be
positively regulated by the adjacent regions, the 190 bp downstream region
(DRR), containing most of the transcription start sites, and the 50 bp
upstream region (URR). When separately analysed, the URR and the DRR
regions activated the ct3 minimal promoter by 1.5-3 fold, both in neuronal
(SKNBE and SY5Y human neuroblastnma cells) and non neuronal (TE671
human rhabdomyosarcoma cells) cell lines. When simultaneously present.
the URR and DRR exhibited a strong and neuron-specific enhancing effect
on the ct3 minimal promoter activity, resulting in 16 fold incrcase in
SKNBE and 6 fold in SY5Y. Furthermore, the DRR sequence was found to
activate the SV40 heterologous promoter, only in the neuronal cell lines,
whereas the URR region resulted ineffective on the SV40 promoter. These
observations seem to suggest a tissue-specific, promoter-specific sinergistic
interaction between the region adjacent to the ct3 minimal promoter. We're
currently investigating the DNA-protein interactions that are relevant to the
activity of the URR and DRR regions.
(We/3.2/234)
Previous studies have shown that exercise can cause a change in the specific
activities of the antioxidant enzymes glutathione peroxidase (GPX), CuJZn
superoxide dismutase (Cu/Zn SOD) and catalase (CAT) in SHR
(spontaneously hypertensive) rats and WKY (Wistar-Kyoto) rats. In order
to determine if the changes observed in the specific activities of the enzymes
were due to a change in mRNA levels, the levels of mRNA in myocardium
and liver were determined by quantitative ribonuclease protection assay. In
the myocardium of SHR rats, exercise caused a significant decrease in the
mRNA levels of the Cu/Zn SOD mRNA and GPX mRNA and a significant
increase in the CAT mRNA. Exercise caused a significant decrease in the
CAT and GPX mRNA levels of the myocardium of the WKY rats. In the
liver of both the WKY and SHR rats, exercise caused a significant decrease
in the Cu/Zn SOD and GPX mRNA levels. The CAT mRNA levels show a
significant increase due to exercise in the liver in both the WKY and SHR
rats. The changes in the GPX mRNA levels in the myocardium and the liver
of both the SHR and WKY rats and the WKY myocardium CAT mRNA
levels parallel the changes in the antioxidant enzyme specific activity
suggesting that the changes in enzyme activity may be caused by changes in
the mRNA levels. The changes in the Cu/Zn SOD mRNA levels in the
myocardium and liver of the SHR and WILY rats and the CAT mRNA levels
in the myocardium and liver of the SHR rats and the liver of the WKY rats
inversely correlate with the enzyme specific activity changes suggesting a
post-transcriptional control mechanism for these enzymes.
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Stat family members are cytosolic proteins that are activated by tyrosine
phosphorylation catalyzed by receptor-associated Jak kinases in response to
a variety of stimuli. Phosphorylated Stats dimerize and translocate to the
nucleus to regulate gene transcription by binding to so called GAS-elements
[1]. The Stat activation occurs in a tissue- and ligand- specific pattern. We
have investigated the Jak-Stat pathway in human and chicken macrophages
in response to interferons before and after differentiaton and find a similar
activation pattern in both cellular differentiation model systems: interferons
cause a stronger activation of Statl in mature macrophages and a decreased
activation of Stat5 as compared to undifferentiated cells. This activation
pattern might constitute one level at which transcriptional activation of gene
expression is regulated in maturing macrophages during an immune
response. We make use of the human cell line U937 that can be
differentiated in vitro by T P A and of myeloid chicken progenitor ceils that
are derived by transformation of bone marrow with the retrovirus TsE26 that
encodes a temperature sensitive oncoprotein p135 ~a~'myb~s [2]. The
proliferation of these cells at 37C and their differentiation at 42C depends
on the presence of the growth and differentiation factor cMGF (chicken
myelomonocytic growth factor). The identity of the chicken Stat homologues
has been determined by use of antibodies that specifically recognize the
respective mammalian Stat. Furthermore we have cloned the coding
sequence for chicken Stat5b by colony hybridization and we have shown that
differentiation stimuli cause the activation of Star5 in the cells described here
[3]. Future experiments will address the mechanism of Stat activation in
macrophages; in collaboration with Matthias Kieslinger and Hartmut Beug
we test currently if Stat5 is required for the differentiation of macrophage
progenitors by overexpression of dominant negative mutant forms of the
protein.
[1] T.Decker et al., Immunobiol. 198. (1997) 99
[2] H.Beug et al., Cell 39, (1984) 579
[3] I.Woldman et al., J. Immunol. 159, (1997) 877
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by this extra domain that is not necessary for aminoacylation in vitro and in
vivo. Previous experiments [ 1], like the resolution of the crystal structure of
the complex AspRS/tRNAAsp or the free protein were done with proteins
partially or completely deleted of this domain [2, 3]. The capacity of the Nterminal 70 amino acids to recognize RNA was tested and the motif
responsible for RNA binding was narrowed.
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Escherichia
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o-c
ta: R=H(2'-ant-Ado)
ib: R=FO3H t2"-am-Aiv~)
North (N)-sugar
(C3"-endo-C2'-exo)
o.c
")a:R=H (3'-ant-Ado)
2b:R=PO3H ~3"-ant-.advlP)
South (S)-sugar
(C3 '-exo-C2"-endo)
synthase. Key identity elements for selenocysteine synthase are the long 9
bp AA- and long 6 bp D-stem. Major serine tRNA was converted to a
mutant with a 9 bp AA-stem and 6 bp D-stem, instead of a 7 bp AA-stem
having 13 bp of the total length of AA- + T-stems were active but the
mutants having 11 or 14 bp were inactive. This shows that SerRS
measures the distance between the discriminator base and long extra arm
(Wef/.3/248)
The positive [1,2] and negative identity elements [3] of yeast tRNA ASp were
previously determined by steady-state kinetics for a series of unmodified
tRNA A~p variants. These studies were carried out by knowledge based site
specific mutagenesis. In order to screen for altemative anticodon loop
structures to be recognized by yeast AspRS, an in vitro approach based on the
selection of aminoacylated tRNAs [4] has been applied An initial library
covered a sequence space of 7 anticodon loop nucleotides generating
47 = 16.000 tRNA A~panticodon loop variants. Six rounds of selection created
pools with enhanced charging activity and sequence analysis of a total of 50
clones revealed molecular species containing predominantly the wt anticodon
sequence Steady-state kinetics of the aspartylation reaction were performed for
selected species after the 4th and the 6th round of selection. We also selected a
fully active tRNA Asp variant displaying a shifted anticodon G35U36C37.
Furthermore this variant does not present the conserved U34 nor a purine at
nucleotide 37. Mutations at these positions reduce the specificity constant k~,,/K~
for aminoacylation by 1-4 orders of magnitude, whereas mutations at the wt
anticodon G34U35C36 positions revealed losses by 2-3 orders of magnitude
[1]. We conclude that, compared to wt tRNA ASp, the changed anticodon loop
structures must be recognized in an alternative way.
[1]
[2]
[3]
[4]
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Programme.
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The aspartic acid system of yeast is one of the few systems where the
~tlUCture~ of the free tRNA and its co111131cx with the cognate ~;ynthela~c.
aspartyl-tRNA syntheta~e (AspRS). have been determined [I, 21. Their
comparison highlights the remarkable conformatlonal changes occtning to
the tRNA ~'e upon the complex formatinn [3]. In order to detect ~imilar
sn-uctural modifications affecting the enzyme, man', crystallization attempts
of fi'ec AspRS were condttcted during the hlst two decade,,. Howe,.cr. thls
protein proved to be vcr 3 difl'~cuh to crystalhzc m at form suilable fol
structtlre detcrminaIioll More reCelltly, cly~;tallogcllcM ~, ~,tudles illlpl'ovecl
the quality of free A,,pRS crystals and produced t,,vo crystal forms
diffracting X-rays to a resolutiml better than 3 A [41. The structure of the
free AspRS in the tetragonal space group (P41212) was ,,olved by molecular
replacement and refined to 2.95 ,~. Structural change,, between AspRS in its
flee state and its complexcd torm with the cognate IRNA Inillnly concern Ihc
catalync domain with two mobile Ioop~. also observed m procaryotic
AspRSs. that open and clo~e the acnve site of the enzyme. In addition, the
antlcodon hinditlg domain undergoe~ a ~hght rigid body mo~enlenl.
[t ] Mola~ D. et at.. NatLIte. 2g~. (I 9~0) 669
[2] Rulf M. et al.. Scmnce. 252. (1991) 1682.
[3] Rees B. et al.. BIochimm. 93. (1996) 624.
[4] Sauter C. et al.. Acta Cryst.. D55. 11999) [49.
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Abstracts FEBS'99
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Membrane fragments containing purified ion pumps (NaK-ATPase, HKATPase or Bacteriorhodopsin (BR)) were adsorbed on black lipid membranes
forming a compound membrane system. A lock-in amplifier was used to monitor
changes in the impedance of the system associated with activation of the ion
pumps. The ion pumps were activated either by flash photolysis of an inactive
precursor of ATP (caged ATP), in the case of NaK-ATPase and ~K-ATPase, or
by illumination with visible light in the case of BR. In all cases, activation of the
pumps leads to a reversible change in the impedance of the compound membrane
system.
We attribute the change in impedance associated with the activation of ion
pumps to the voltage dependent equilibrium between two states in the enzymatic
mechanism of ion translocation. In the case of the NaK-ATPase it has been shown
using whole-cell patch clamp recordings that following a voltage jump the system
relaxes exponentially and the rate constant of the relaxation process was assigned
to the reaction E 1P(3Na+)cz>E2P+3Na*. Instead of a voltage jump we have used
a periodical perturbation and we have analysed our signals in the frequency
domain. The frequency spectra of the impedance signal could be interpreted as
the sum of two charge moving reactions. We have determined a rate constant for
the slow charge moving reaction of 393 s t at pH 7.4 and 24C. Preliminary
experiments with the HK-ATPase indicate a different behaviour, namely no
electrogenic transition with a rate constant between 60 s -a and 1800 s-~. Rate
constants as slow as 42 s -~ have been reported for the E 1P--+E2P conformational
transition which are in agreement with our results so far.
In the case of BR the impedance signals displayed a biphasic behaviour.
The slow phase dissapears upon permeabilization of the membrane system by
addition of the ionophores monensin and 1799.We atribute the fast phase to a
voltage dependent equilibrium within the photocycle (possibly the MIc=,M2
transition) and the slow phase to charge accumulation between the menthrane
fragments and the BLM. The action spectra of the impedance signal follows the
absorption properties of BR. Experiments performed with the mutant D96N
indicate slower charge accumulation, which can be explained by a slowing down
of the photocycle.
(We/12.2/264)
(We/12.2/265)
(We/12.2/266)
s345
(We/12.2/267)
(We/12,2/268)
20. FRANCE
(We/12.2/269)
and Lernesle-Meunier, D
(1995) J. Bioenerg
s346
Abstracts FEBS'99
(We/12.2/270)
(We/12.2/271)
(We/12.2/272)
[laumanSERCA3
sc sa Sb
122
pA ]
Ip_~
(We/12.2/273)
Abstracts FEBS'99
(We/12.2/274)
Heme proteins and enzymes play key roles in biological electron transfer
reactions, e.g., Williams et al. found that for cd~ nitrite reductase, which
catalyzes the reduction of nitrite to nitric oxide, the 6 ~" ligand interchanges
between histidine and methionine during its catalytic cycle. In our work,
we have examined the Phe82His/Cys102Ser variant of iso-1-cytochrome c.
For wild type iso-l-cytochrome c, the normal 5 ~hand 6'h ligands in both
redox states are histidine and methionine. Direct square-wave and cyclic
voltammetric electrochemical examination of the Phe82His/Cys102Ser
variant revealed the intricacies of redox driven changes in axial
coordination, concomitant with intramolecular rearrangement. Cyclic
voltammetry (CV) and square-wave voltammetry (SWV) are ideally suited
for such a redox study, since they provide a direct and quantitative
visualization of specific dynamic events. SWV showed that the primary
species in the reduced state is the Mets0-FeZ-Hisls coordination form, while
in oxidized state the Hiss2-Fe3+-Hists form predominates. Thus the addition
or removal of an electron to the appropriate form of this variant serves as a
switch to a new molecular form of the cytochrome. Using the 2X2
electrochemical mechanism, simulations were done for the CV experiments
at different scan rates. These, in turn, provided relative rate constants for
the intramolecular rearrangement/ligand exchange and the equilibrium
redox potentials of the participating coordination forms: E ' = 247 mV for
Mets0-Fe3+/Z+-Hisls couple, E ' =47 mV for His82-Fe3+/Z+-Hisls couple, and
E ' = 176 mV for the cross reaction couple: Hissz-Fe3-Hiszs + e
Mets0-Fe2+-His~s. The entropy of reaction, AS~,, was determined for the
net reduction/rearrangement: Hissz-Fe3+-His~s + e- "~ Mets0-Fe2+-Hisas
and compared to that for wild type cytochrome: Mets0-Fe3+-His~ + e- +
Mets0-Fe2+-His~8. For the Phe82His variant mixed redox couple, AS~o =
-80 J/mol.K compared to AS~, = -53 J/mole.K for the wild type cyt c
couple without rearrangement. Comparison of these entropies indicates that
the oxidized Hiss2-Fe3+-His~s form, is highly disordered, and this may
facilitate its rapid rearrangement to Metso-Fe2+-His~8 upon reduction.
[1] B.A. Feinberg, et al., Biochemistry 37 (1998) 13091.
(We/12.2/276)
Nicotinamide nucleotide transhydrogenase (EC 1.6.1.1) is a membranebound proton pump which catalyses the reversible reduction of NADP + by
NADH linked to proton translocation across the membrane.The
physiological role of the enzyme still remains unclear. The chromosomal
localisation of the transhydrogenase gene has been determined by
fluorescence in situ hybridisation in mouse, rat and human using mouse and
human cDNA as probes [1]. The positions were mouse chromosome
(MMU) 13D2, rat chromosome (RNO) 2q 16 and human chromosome
(HSA) 5p 13.1, respectively, suggesting that the transhydrogenase gene is
included in a group of genes that exhibits conserved synteny between
MMU 13, RNO2 and HSA5 [2]. Cloning of the genomic gene and restriction
enzyme mapping and sequencing of the exon/intron borders show that the
gene is more than 100 kb large and consist of_>21 exons. The cloned part of
the gene cover the area from eight amino acids into the mature protein until
the 3' untranslated region.
s347
(We/12.2/275)
(We/12.2/277)
s348
(We/12.2/278)
Abstracts FEBS'99
(We/12.2/279)
(We/12.2/280)
Disk membranes of rod outer segment are known to store calcium at millimolar
levels making a steep gradient with the cytoplasm where Ca 2 has a
concentration of about .5 IxM. A Ca 2. -ATPase was first localized by
cytochemical studies on ROS disk membranes of the toad retina [1] and then
isolated on polyacrilamide gel from bovine ROS disks [2] and successively
characterized as a Sarco- or Endo-plasmic Reticulum Calcium ATPase
(SERCA) type with a 100 kDa phosphorylated intermediate [3]. This Ca 2+pump has a k m for Ca 2+ = I0 laM [2] and a negligible activity at Ca 2+
concentrations between . 1 ~tM and 1 p_M, which means that, at physiological
Ca2*concentrations, the pump does not work to uptake calcium ions into the
disks. Although the actual reversibility of an ion - ATPase has rarely been
demonstrated in eucariotic cells, our results suggest that the Ca ~+ -ATPase of
the disks is able to reverse its function by acting as a synthesizer of ATP at the
expense of the Ca 2+ gradient. In fact, Ficolt purified disks from rod outer
segment, in the presence of ADP and phosphate, released calcium and
synthesized ATP at the physiological range of Ca 2+ concentrations present in
rod cytoplasm. The ATP synthesis had a k~ for Ca 2. _= 10 laM and was inhibited
by vanadate, a strong inhibitor of phosphorylated ATPases. These results are
important in terms of the need of an immediate source of AtTP on the disk
membranes where the energy is requested to supply the rapid*reactions of the
photoreception processes.
1. Davis, W.L.et al. Anat.Rec. 221 (3), 1988, 761.
2. Panfoli, I. et al. J. Photochem. Photobiol. 24, 1994, 187.
3. Panfoli, I. et al. Biochem Biophys. Res. Commun. 204(2), 1994, 813.
This work was supported by the PRIN project "Bioenergetica e Trasporto di Membrana" of
the Italian MURST.
(We/12.2/281)
Abstracts FEBS'99
(We/12.2/282)
s349
(We/12.2/283)
s350
Abstracts FEBS'99
(We/15.2/287)
Brassica j u n c e a
D.Alex and M-L.Chye
Department of Botany. The Universzty of Hong Kong, Hang Kong
(We/15.2/288)
Bell pepper fruit development can be divided into three phases. The first
one corresponds to an active program of cell divisions, it is followed by a
phase of cell expansion until the fruit reaches its final size, allowing the
third phase, the ripening, to take place. In order to elucidate the regulation
mechanisms involved in gene expression during the early stages of fruit
development, we have set up a strategy for the isolation of cDNAs
specifically expressed at this stage.We have isolated a eDNA encoding
CAFP (Capsicum annuum fusion protein), a protein from the AAA family
(ATPases associated with diverse cellular activities) homologous to the
yeast Cdc4gp. A structural characteristic is the presence of the AAA family
is the presence of a conserved sequence (AAA module) of 220-250 residues
that includes 3 signature sequences, Walker A and B domains and SRH
(Seconde region of homology) also present in RNA/DNA helicases.
CAFP encodes a protein of 805 amino-acids, a calculated MW of 89,5 KDa
and a pI of 5,01. The protein contains 2 AAA modules highly conserved, 2
nuclear targetting signals in the N-terminal region and several putative
phosphorylation sites over the entire sequence. Southern blot analysis
suggests that the corresponding gene is unique in the bell pepper genome.
This result was confirmed by a PCR approach on genomic DNA allowing
to establish the structure of the gene. Analysis by northern blot reveals a
transcient accumulation of transcripts during the early development and
during ripening. However, the highest protein level, as estimated by
western blot is mainly found during the early stages of the fruit. These
results suggest different mechanisms of gene expression depending on the
fruit development stage. To further characterize CAFP and to test its
potential involvement in cell division, we have extended our study to an
experimental system less complex than the fruit : the tobacco BY2 cells.
In a first attempt we have isolated the cDNA (n~p), counterpart of cafp. The
cDNAs from the 2 species share 73% homology, ntfp gene expression is
also regulated in BY2 cultured cells : transcripts and proteins are
preferentially accumulated during the exponential phase of growth.
Immunolocalization studies suggest that the majority of proteins is present
within the nucleus consistent with the presence of putative nuclear target
signals. In addition, in order to determine more accuratly and in a dynamic
way the cellular localization of NTFP, we have developped an other
approach : the protein fused to a cellular marker, the GFP. After transient or
stable transformation of BY2 the fusion protein is detected in the cells and
results of the expression at different development stages will be discussed.
(We/15.2/289)
Abstracts FEBS'99
(We/15.2/290)
s351
(We/15.2/291)
(We/15.2/292) The tobacco extensin Ext 1.2 gene family: cloning and
regulation of expression
P. Guzzardi and E. Jamet
Institut de Biologic Molgculaire des Plantes/CNRS- Universitd Louts Pasteur,
12, rue du Gndral Zimmer, 67084 Strasbourg Cedex, France
The plant cell wall is a complex structure composed of two main networks,
the cellulose/xyloglucan network and the structural proteins network,
embedded in a pectin matrix. Extensins are HRGPs (Hydroxyproline-Rich
GlycoProteins) and are major structural compounds of higher plant cell
wall. We are interested in the molecular events which take place after
Nicotianeae mesophyll protoplast isolation. Indeed, the cell wall
regeneration might be a main step in plant regeneration via protoplasts. An
extensin gene family named Ext 1.2 is transcribed immediatly after
protoplast isolation. As a first step towards the characterization of Ext 1.2
genes, a cDNA clone was isolated from a cDNA library made from 6h-old
mesophyll protoplasts of Nicotiana sylvestris (Plant Mol. Biol. (1995) 29:
279-292). The aim of the present study is to characterize the Ext 1.2 gene
family and to study its regulation, especially in response to wounding.
The Ext 1.2 gene family was characterized using different PCR techniques,
including direct and inverted PCR, directly applied on genomic DNA.
Three genes were found: Ext 1.2A and Ext 1.2B which were completely
sequenced, and Ext 1.2C which consisted in a 3' non-coding region devoid
of intron. This was consistent with results from Southern blot analysis and
from Northern blot experiments which showed the existence of two
mRNAs transcribed from Ext 1.2 genes which might originate from
Ext 1.2A and Ext 1.2B respectively: 1.2 kb mRNAs in protoplasts, in
wounded tissues and in roots, and 0.9 kb mRNAs in stems.
The expression pattern of Ext 1.2A was further studied in transgenic
tobacco plants containing chimeric fusions between fragments of the
Ext 1.2A promoter and the coding region of the 13-glucuronidase (GUS)
gene. Histochemical stainings showed that the Ext 1.2A/GUS gene fusion
was expressed in wounded tissues, in root meristems and unexpectedly in
cells located at the edge of leaves.
The analysis of the Ext 1.2A promoter in transgenic plants will identify
different regulatory elements. This study will also allow to test the
hypothesis of a role for Ext 1.2 in cell wall repair after wounding.
s352
Abstracts FEBS'99
(We/15.2/294)
(We/15.2/295)
(We/15.2/296)
is not only a source of reduced carbone for sink organs but is now considered
as a signal molecule able to regulate the expression of several genes (sugar
sensing).
By screening a tobacco (Nicotiana tabacum) pollen cDNA library with
the potato sucrose cartier as a probe, we have identified a new eDNA (NtSUT3)
that shows high homologies to other plant sucrose carriers. However NtSUT3
has several remarkable features :
i) It has a small open reading frame upstream of the start codon. This kind of
sequence is frequently found among genes regulating growth and development
in plants.
ii) Studies in Northern blots showed that NtSUT3 expression is restricted to the
very late stages of pollen maturation and to pollen tube growth.
In order to understand the exact role of NtSUT3, we have developed
new tools (yeast expressing NtSUT3, antisense transgenic tobacco plants,
antibodies specific to NtSUT3). Some of these results will be presented and
discussed in relation to pollen maturation and pollen tube growth.
(We/15.2/297)
Abstracts FEBS'99
(We/15.2/297)
s353
s354
Abstracts FEBS'99
17 Extremophiles
(We/17/298)
( W e l l 7/299)
N. Aghajari, R. Haser
lnstitut de Biologic et Chirnie des Prot~lnes, Bto-Cristallographie,
UPR 412 CNRS, 7 Passage du Vercors, 69367 Lyon cedex 07, France
References
[1]
[2]
[3]
(We/17/300)
(We/17/301)
Abstracts FEBS'99
(We/17/302)
s355
(We/17/303)
~ ;, h , ,i,p
, }~
:,~
~., ,
/~,b/Rl,~ / ,
b~th , ~ , , ~
csl,.~.z,n icrs ~
a ~r~v
(We/171304)
(We/17/305)
A COLD-ADAPTED CELLULASE
G, GARSOUX~, J. LAMOTTE*, M, CZJEZK#, E BARRAS, C. GERDA'
~"Laboratotre de Bloehtmleand CIP.' Instffut de Chtmt B~. Universitd de Lt~ge.
Sart-Tllman, 4000Liege. Belg~que,E-math ~tenevieve,~lar.~oux~ul~ a~he;
#AFMBand LCB CNRS,31~Chemlnl Atguler, 13402Marsellles Cedex 20, b?anc
s356
(We/17/306)
Abstracts FEBS'99
(We/17/308)
(Wed17/307)
(We/17/309)
Abstracts FEBS'99
(We/17/310)
T. ferroaxidans c y t o c h r o m e
purification and molecular characteristics.
P. Tron, D. Benan'och, C. Michel audD. Lemesle-Meunier.
s357
oxidase:
(We/17/312)
(We/17/311)
hydrothermalis
L. PERROT, E. LEGIN and F. DUCHIRON
Universit~ de Reims-Champagne-Ardenne, France
Microorganisms growing in extreme ecosystems contain considerable
amounts o f enzyme potentially beneficial for the development o f bioeatalysis
and catalysis (1). Hydrolysis o f peptide bonds is a prerequisite for utilisation
o f proteins as sources o f amino acids for bacterial growth and represents an
essential mechanism o f modification o f proteins at the posttranscriptional
level. However, few reports about hyperthermophilic archaeal proteinases
have been published to date (2,3). The study o f archaeal aminopeptidases
could allow a better understanding o f the catalysis ofthermostable proteins.
The marine anaerobic hyperthermophilic Thermococcus hydrothermalis
producing an aminopeptidase (EC 3.4.11.-) was isolated from deep-sea
hydrothermal vent located on the East Pacific Rise. The purification steps o f
this enzyme included ammonium sulphate precipitation, Q Sepharose High
Performance chromatography and Sephacryl S-200 H R chromatography.
The enzyme was more active against H-Leu-para-hitroanifide (H-Leu-p-NA)
than against H-AIa-p-NA. The partially purified aminopeptidase displayed
optimum activity around pH 7.0 and the temperature optimum o f the
enzyme was 85C. This aminopeptidase showed a remarkable stabilit)
against heat and organic solvents.
(1) Borman S. (1991) Chem. Eng. News, 4, 31-33.
(2) C o w a n D.A., Smolenski, K.A., Daniel R.M. and Morgan H.W. (1987)
Biochem. J., 247, 121-133.
(3) Hanner M., Redl B. and St6fller G. (1990) Biochem. Biophys. Acts.
1077, 148-153.
(We/17/313) T h e
s358
(We/17/314)
Abstracts FEBS'99
(We/17/315)
(We/17/316)
(We/17/317)
Abstracts FEBS'99
(We/17/318)
s359
(WeJ17/319)
(We/17/320)
(We/17/321)
Enzymes
of
extremophilic
microorganisms,
existing
under
unusual
conditions, are potentially useful. Recently more attention has been paid to
enzymes from microorganisms originating from permanently cold, polar
marine environment, which exhibit high activities and enhanced catalytic
efficiency at low temperatures [1]. We report on dynamics of biosynthesis
and some properties of an invertase produced by psychrophilie, endemic yeast
strain (optimal and maximal growth temperature, 15 and 22C, respectively)
of Leucosporidium antarcticum, isolated from Admiralty Bay waters.
Maximal enzyme biosynthesis occurs at 6C and is 50% higher than at the
growth optimal temperature. 90% of the invertase activity is bound to cells,
and only 10% is excreted to a growth medium. The enzyme bound to cells
can not be salted out and is a counterpart of the external invertase from
mesophilic S. cerevisiae [2]. The enzyme from L antareticum was purified
using DEAE-cellulose and ConA-Sepharose chromatography. Invertase is
stabilized and activated by Mg 2+ and Mn z ions and most active at 25-30C
(at 0C it exhibits more than 30% of maximal activity) and pH 4.5. It is
extremely thermolabile since it retains total activity up to 12C for 30
minutes. The enzyme prefers saccharose to raffinose as a substrate. Further
studies on invertase are in progress.
I.
s360
Abstracts FEBS'99
(We/3.3/323)
(We/3.3/324)
(bleomycin,
adriamycin...)
or
drugs
without
reported
Abstracts FEBS'99
(We/3.3/326)
s361
(We/3.3/327)
Furthermore. \~c
(We/3.3/328)
(We/3.3/329)
" hl.slttulul de Btochtmte, P 0 Box 2-2, R0-7~200 Bucure.~tz 2. ~ LVSERM (]]P 9707. 170
Boulevard Ney, b~75877 Parts Cedex 18: ' Statton de I'INRA, 269 Rue Jules Guev.le, b2
59650 l'tlleneuve d'Ascq, a ht~titutul de Btologw. P.O. Box 56-53, R0-79651 Bucurestt; ~
('entre Regtonal de ]?ansfuston Sangttme, B P 2018, 1"~59012 Ldle Cedex; t (buversJtd de.~
Sctence.~ et Tt'~qmol~L~le~ de Ltlle. Laboratotre de ('hsmie B~ologJque, F-59655 l)lleneuve
d 'A.wq t "edex.
Human red blood cells (RBC) survive in the circulatory system for about 120 days
and, every day. 360 billions of RBC are phagocytized. This phenomenon raises the
following question. "By what specific membrane signals do the macrophages
distinguish between the senescent RBC and others?>>. Even if it is generally
asserted that erythrocy~es cannot undergo apoptosis because they lack nucleus and
mitochondria, we have hypothetized that erythrophagocytosis by macrophages
could be regarded as an apoptotic mechanism, on the basis of a series of wellknown characteristics of senescent RBC which are characteristics of apoptosis :
progressive decrease of szze due to a progressive release of vesicles from RBC
membrane, budding of RBC leading to the echinocyte form and then to the spheroechmocyte form with filipodes due to cytoskeleton alteration, desialylation.
exposure ofphosphatidylserine (PS) in the outer leaflet of cell membrane, increase
of protease actlwty
We have undertaken experiments using erythrocytes submitted to conditions of
"accelerated senescence" by incubation at 37C for a few days. The results we
obtained could be summarized as follows: cystem-protease mbibitors inhibit t) the
PS exposure, tO the m vitro capture and phagocytosis of RBC, m ) the m vtvo
clearance of RBC in mice, tv) the RBC hemolysis. They maintain the heated RBC
in their natural discoid form. Cystein-proteases have been evidenced which are
inhibited by cystein-protease inhibitors Identical results were obtained using
nucleated RBC of R a n a incubated at 30C. In fact, cystein-protease inhibitors
block the fragmentation of nucleus, the exposure of PS, the fixanon of propldium
iodide (PI) and the protease activity.
Taking all together, these results strongly support the hypothesis that phagocytosis
of senescent RBC occurs at the end of an apoptotlc phenomenon.
s362
Abstracts FEBS'99
(We/3.3/330)
(We/3.3/331)
a." UPRESA 6022 CNRS-UTC, Compikgne; b: UPR 420 CNRS, Villejuif" c"
UMR 6522 CNRS-Univ. Rouen (IFRMP 23), Mont-Saint-Atgnan.
(We/3.3/332)
(We/3.3/333)
The
death
effector
domain-containing
phosphoprotein enriched in astrocytes PEA-15, is
involved in apoptosis regulation.
B. Canton, M. Fauquet, J Glowinski & H. Chneiweiss
I N S E R M U114/' Collkge de France, Paris, France.
Abstracts FEBS'99
(We/3.3/334)
s363
(We/3.31335)
(We/3.3/336)
Quaternary ammonium-induced
apoptosis in conjunctival cells in vitro
C. Debbasch~, P. Rat a, J.-M. Warne:, C. Baudouin b
(We/3.3/337)
The biologically active compound of marihuana, A9tetrahydrocannabinol (THC), promotes specific effects in humans. Two Gprotein-coupled receptors have been identified as cannabinoid receptors and
are refered as central CB 1 and peripheral CB2 receptor (reviewed in [ 1]), CB 1
receptor is principally expressed in central nervous system although it has also
been detected in other tissues like testis [2] and spleen cells [3]. Cannabinoids
exert a wide spectrum of effects such as alteration in cognition and analgesia.
In addition to psychotropic effects, cannabinoids also have inhibitory effects
on immune function.
We have studied the effects of THC in the human prostatic cell line PC3 which is androgen refractory. First of all, we assessed whether PC-3 line
expressed CB1 receptor. Western blotting results revealed two bands which
correspond to different glycosilation states of the receptor. Addition of THC
to cultured cells caused cellular death detected by depression o fmitochondrial
oxidative metabolism. To investigate whether the cellular death was apoptotic
or necrotic we determined anexin V binding by fluorescence microscopy and
nuclear fragmentation by 4',6-Diamidino-2-phenylindole (DAPI) binding to
DNA. Results showed that THC induced apoptosis in a dose-dependent
manner that was tmximal at 5 gM and 6 days of treatment. Apoptosis induced
by THC was not counteracted either by pretreatment with pertussis toxin nor
by the antagonist AM 251. Moreover, the potent cannabinoid receptor agortist
WIN 55212-2 bad no effect on PC-3 cellular death. Results thus show that
although cannabinoid receptor is present in prostatic PC-3 ceils, THC-induced
cellular death is not mediated by the caunabinoid receptor.
1.
2..
3.
s364
Abstracts FEBS'99
(We/3.3/338)
(We/3.3/340)
(We/3.3/341)
Abstracts FEBS'99
(We/3.3/342)
(We/3.3/344)
s365
(We/3.3/345)
s366
(We/3.3/346)
Abstracts FEBS'99
(We13.31347)
(We/3.3/348)
(We13.3/349)
Abstracts FEBS'99
s367
(We/3.3/351)
(We/3.3/353)
s368
(We/3.3/354)
Abstracts FEBS'99
(We/3.3/355)
(We/3.3/356)
(We/3.3/357)
Abstracts FEBS'99
(We/3.3/358)
s369
(We/3.3/359)
(We/3.3/360)
The aim of this study was to investigate the role of CFTR in apoptosis
by modulating the intracellular pH Apoptosis was studied in 2 fibroblast cell
lines obtained from hamster lung : the PS 120 line which does not express the
NHE 1 isoform of the Na+/H + exchanger and the PS 120-NHE1 line which
over-expresses this isoform Each cell line was transfected with the cDNA
encoding for the human CFTR. The cell lines were incubated to undergo
apoptosis with lovastatin (30/zg/ml). Apotosis was followed I2, I6, 20, 30
and 40 hours after the beginning of lovastatin treatment by observing the
nuclear chromatin condensation after orcein staining, by double staining with
Hoeschst 33258 and propidium iodide, and by relative measurement of DNA
fragmentation. In PS120 control cells the percentage of apoptotic cells after
40 h oflnvastatin was 23 3 % (n = 7 cultures) whereas in PS120-CFTR
transfected cells this percentage was 40 4- 4 % (n= 9 cultures). Moreover the
% of DNA fragmentation was strongly increased in the presence of CFTR
(control : 53 4- 10 %, CFTR : 91 4- 20 %). In PS120-NHEI cells, the
transfection with CFTR did not modify the % of apoptotic cells after 40 h
(control : 19 4- 3 %, n= 8 ; CFTR : 17 4- 1%, n = 8). Intracellular pH was also
monitored using BCECF and fluorescence video-microscopy. In all cell lines,
the initial pH values were identical (pH = 7.46 ~: 0.04, n = 9) and treatment
with Iovastatin led to intracellular acidification. However, the pH value a~er
40 h was much more acid in PS120-CFTR tranfected cells (pH = 6 85 4- 0.02,
n=10) than in PS 120 cells ( pH = 7.15 0.03, n = 10 ). To investigate further
the origin of this increase ofintracellular acidification, the activity of the CI"
/HCO 3- exchanger was studied. PS 120 cells exhibited a CI'/HCO3 "exchanger
blocked by DIDS. The exhanger was activated by 8Br-cAMP in PS 120-CFTR
transfected cells only. In conclusion, the CFTR increased the rate ofapoptosis
induced by lovastatin in fibroblasts which did not express NHE 1. This increase
could be attributed to a better cytoplasmic acidification, due to the modulation
of the CI/HCO3 - exchanger by CFTR. In PS 120-NHE 1 cells, CFTR does not
modulate apoptosis, due probably to the fact that the over-expression of
Na*/H* antiporter limits the decrease of pHi.
(We3.3/361)
s370
Abstracts FEBS'99
(We/3.3/363)
(We/3.3/364)
PC-3 cells are an androgen independent prostate cancer derived cell line
which is highly resistant to chemotherapeutic drugs and other inducers
of apoptosis. Our laboratory is using this cell line to examine the
regulation of apoptosis in prostate cancer cells. Here, we report that
osmotic stress generated by sorbitol, at concentrations greater than
0.2M, induced apoptosis in PC-3 cells in full serum conditions after two
hours. This was confirmed by viability counts and morphological
changes using Hoechst staining. Sorbitol-indueed apoptosis also
correlated with increased acivity of the apoptosis effector enzyme
caspase-3.
A key area of interest has been the combination of various apoptotic
agents to give an enhanced response. Ghosh and Myers [1] have shown
that inhibition of the 5-1ipoxygenase pathway induces apoptosis in
prostate cancer cells. In our experiments, the general lipoxygenase
inhibitor Nordihydroguaiaretic Acid (NDGA) combined with sorbitol
produced a synergistic response in serum-free conditions. This implies
that the combination of eicosanoid inkibitors with other apoptotic agents
should be explored for its chemotherapeutic usefulness.
[1] J. Ghosh et al., PNAS, 95, (1998) 13182.
(We/3.3/365)
During the last years evidence has accumulated that points towards a central
role for mitochondria in apoptosis-induction. Especially the permeability
transition (PT-)pore, an integral membrane complex, has recently been implicated in the execution of the apoptotic program. Here we describe the
isolation of adenine nucleotide translocator-1 (ANT-1), a central component
of the PT-pore, using a novel screen for dominant, apoptosis-inducing
genes. ANT- 1 overexpression led to all characteristics of apoptosis including
caspase-activation, DNA-degradation and mitochondrial membrane gradient
disruption. Although ANT-1 is known as a mitochondrial ADP/ATP-carrier,
we show that its apoptosis-inducing capacity is independent of adenine
nucleotide transport. Furthermore this apoptosis induction is highly specific
for A N T - I since ANT-2, a very homologous isoform, was unable to elicit
apoptotic changes in mammalian cells. The pro-apoptotic protein Bax, that
interacts directly with ANT-I can induce a form of cell death in S. cerevisiae
by activating the PT-pore. In contrast, ANT-I is unable to generate such
lethal effects in yeast.These data suggest that ANT-l-induced apoptosis
relies on specific protein-protein interactions.Taking into account that ANTI is already one of the most abundant proteins of the inner mitochondrial
membrane, its dominant apoptosis-induction activity must be counterbalanced by other interaction partners. We show that cotransfection of
cyclophilin D, a PT-pore associated mitochondrial matrix-protein, results in
repression of ANT-1-mediated apoptosis.Thus, ANT-1 seems to be part of a
mitochondrion-based interaction network which plays a role in the regulation
of apoptosis.
(Wed3.3/366)
s371
(Wed3.3/367)
Abstract
Bcl-xL, member of the Bcl-2 family, inhibits apoptosis and its
expressmn is regulated at the transcriptional level, yet, nothing is known
about the transcription factors specifically activating this promoter. The bcl-x
promoter contains potential Ets binding sites and we show that the
ti'anscnptmn factor. Ets2. first ~dentified by its sequence identity to v-ets of
the E26 retrovirus, can transacUvate the bcl-x promoter. Transient expression
of Ets2 results in the upregulation of Bcl-xL, but not Bcl-xs, an alternatively
spliced gene product which induces apoptosis. Ets2 is ubiqmtously expressed
at low levels in a variety of cell types and tissues, but as specifically induced
to abundant levels during macrophage differentiation. Since Bcl-xL is also
upregulated during macrophage differentiation, we asked whether the bcl-x
could be a direct downstream target gene of Ets2 in macrophages. BACI.2F5
macrophages which are dependent on macrophage colony stimulating factor,
CSF-1, for their growth and survival were used in these studies. We show that
CSF-1 stimulation of BACI.2F5 macrophages results in the upregulation of
expression of ets'2 and h~l-xL with similar kinetics of induction. In the
absence oI CSF 1. thesc macrophages undergo cell death by apoptosis
whereas constitutive expressmn of Ets2 rescues these cells fl'om cell death,
and bcl-xL is upregulated. These results strongly suggest a novel role of Ets2
m affecting apoptosls through its regulation of bcl-x L transcription.
s372
(We/3.3/370)
Abstracts FEBS'99
(We/3.3/372)
In the present investigation, using NIH 3T3 cells we examined the effects
of TNFet and agonistic anti-Fas antibody on chromatin condensation and
histone phosphorylation. 2 to 3 hours after starting the treatment with
TNF~, 40% of the cells and the nuclei round up and phosphatidylserine
externalization could be measured. Later on, chromatin condensed into a
few sharply defined bodies and at the nuclear membrane condensation of
the chromatin occurred. Interestingly, using agarose gels a DNA ladder
was undeteetable. Instead during the early phase of treatment with TNFct
we found DNA of high molecular weight and, thereafter, a smear of
DNA.
During the early phase of the treatment with both TNFtx or anti-Fas
antibody the phosphorylation of all various HI subtypes and core histone
variants decreased rapidly. Somewhat later, the linker histone HI
showed a transient slight increase in phosphorylation. After 4 to 8 hours
of TNFc~ treatment phosphorylation of H2A.X increased significantly.
Simultaneous addition of PKC inhibitor staurosporine, tyrosine PK
inhibitor genistein, PKA inhibitor H89, which at higher doses also
inhibits PKG and PKC, or DNA PK inhibitor wortmannin did not result
in any suppression of the TNFct and Fas effects. The PARP inhibitor 3aminobenzamide, however, reduced markedly the induction of apoptosis.
Simultaneously, a change in the phosphorylation pattern was visible:
whereas the phosphorylation of historic H2A.X was markedly
dimimshed, the phosphorylation of the histone H3.1 was significantly
increased. The results suggest a role of both the phosphorylation of core
histone H2A.X and of H3. I in chromatin condensation.
Abstracts FEBS'99
s373
(We/3.3/376)
(We/3.3/375)
et al. J. Vir01,72,(1998),802.
s374
Abstracts FEBS'99
(We/4.2/378)
Bordeaux 11, 146 rue L#o Saignat, 33076 Bordeaux Cedex France.
In Bacillus
The interaction
interactions
involved
in
(We14.2/379)
(We/4.2/380)
s375
Abstracts FEBS'99
(We/4.2/382)
(We/4.2/383)
We analyze structural features of the recognition sites seen in 75 proteinprotein and 65 protein-DNA complexes taken from the Protein Data Bank.
Conformation c h a n g e s a n d size o f the recognition site. In both types of
complexes, the size is estimated as an interface area B. It ranges between
=1200 and =5000 ~2 and shows a clear relation with the extent of
conformational changes occuring upon association. 70% of the proteinprotein complexes have 'standard size' interfaces with B in the range 12002000 A 2 and small conformation changes. In nearly all of the 27% which
have'large' interfaces burying 2000-5000 A 2, large conformation changes
are seen. Most protein-DNA interfaces have B>2000 A 2, and conformation
changes occur in the protein, the DNA or both. Many of the DNA-binding
proteins are dimers or tandem repeats which can be broken into several
binding units. In 80% of the transcription factors, individual binding units
form with DNA an interface with B in the range 1200-2000 A2 like
a'standard size' protein-protein interface. Notable exceptions are the zinc
fingers, which have B=900 A 2, an area probably too small for a single zinc
finger to achieve stable association with DNA.
Recognition sites are close-packed: the role o f water. Close-packing is
(We/4.2/384)
Abstracts FEBS'99
(We/4.2/385)
s376
(We/4.2/386)
(We/4.2/387)
The IF3 module has been expressed in the yeast Pichia pastoris and
structure/function studies are carried out by heteronuclear NMR. The structure
determination of the IF3 module and the identification of interactions with
other modules of fibronectin should provide a better understanding of how
fibronectin interacts with itself to form large assemblies in the matrix.
(We/4.2/388)
[1] A. Keller et al., Mech Dev, 38, (1992) 41. [2] M. Lucas et al.,
Differentiation, 51, (1992) 1. [3]. T. Merkulova et al., Biochem. J., 323,
(1997) 791.
s377
(We/4.2/389)
Abstracts FEBS'99
(We/4.2/390)
of the number of hydrogen bonds and the type of atoms of the hydrogen
bond donors and acceptors. We fred some correlation between the number of
hydrogen bonds in the complex and its interface area and this correlation
suggest on average 125/~2 per hydrogen bond. Analysing the type of atoms
involved in these polar interactions one finds that the donor group is
contributed by the protein while the acceptor groups are from the DNA or
RNA side. The major role is played by the phosphate groups of the DNA
which is involved in over 60% of the hydrogen bonds, while on the protein
side we fred the sidechain groups of arginie and lysine to be the dominant
player.
Conformation Changes. In our dataset we found 24 complexes for which the
free form of the protein was also available. To quantify the occurred changes
we used the method of superposition. We divided the type of conformational
changes into 5 different categories defined as: disorder-to-order transitions,
quaternary changes, subunit movement within a monomeric protein or
subunit, tertiary changes and in addition to these sidechain movements were
also observed in all complexes. In 12 of the complexes we found the root
mean square distance (RMSD) values of 1-3.& involving local changes,
subunit or domain movements. There are four complexes where the RMSD
values are greater than 4 ,~ involving mostly dimers showing asymmetry in
the mode of binding. We also examined the changes occurring in the
structure of DNA by superimposing the phosphorous atoms using a
reference structure of B-DNA. Five of the complexes show a standard BDNA conformation, while half of our dataset exhibit changes of RMSD
between 1.5-3.0,~. 29 complexes (45%) of the complexes the DNA
undergoes major conformational changes with RMSD values of greater than
3.oA.
(We/4.2/391)
Abstracts FEBS'99
(We/4.2/393)
s378
s379
Abstracts FEBS'99
RhoG is a small GTPase of the Rho family, with closest similarity to Racl.
Expression of active RhoG in cells independently activates Racl and Cdc42,
provoking the apparition of membrane ruffles, lamellipodia, microvilli and
filopodia. This suggested that RhoG is part of a complex signalling cascade
involving the activation of several GTPases.
Trio is a large multidomain protein which contains two dbl-like regions
(GEF1 and GEF2), that specify nucleotide exchange in vitro on Racl and RhoA,
respectively. Given the high sequence similarity between Racl and RhoG, we
tested Trio GEF1 for its ability to induce GDP/GTP exchange on RhoG in vitro.
Our data showed that Trio GEF1 can in fact induce nucleotide exchange on RhoG
with about ten fold higher efficiency as compared to Racl. To further study the
exchange specificity of Trio GEF1, we used the yeast two-hybrid system. The
dominant negative mutant RhoG-T17N could very efficiently bind Trio GEF1,
while the similar mutation on Rac 1 did not allow its interaction with the exchange
factor. Moreover, we have developped in yeast a method to assay for GEF activity
which revealed that Trio GEFI could activate RhoG but not Rac 1.
These observations prompted us to assay whether Trio GEFI could be a
direct in vivo activator of RhoG. As previously reported in Swiss 3T3 cells,
expression of Trio GEF1 in REF-52 cells induced membrane ruffling, lamellipodia
formation, but also microvilli formation at the cell surface. These actin
remodelling activities are similar to those observed after expression of the RhoGG12V active mutant and are indicative of both Racl and Cdc42 activation.
Concomitant expression of Trio GEF1 and Racl-T17N or Cdc42-T17N indeed
resulted in the inhibition of either membrane ruffling or microvilli formation, as
previously reported for RhoG. Moreover, expression of a dominant negative form
of RhoG could inhibit both membrane ruffling and microvilli formation induced
by Trio GEFI. Finally, overexpression of a specific RhoG binding domain inhibits
Trio GEF 1 but has no effect on Rac 1-G 12V.
Taken together, these results indicate that Trio protein directly activates the
small GTPase RhoG, which in turn activates both Racl and Cdc42 through a
downstream cascade of as yet unidentified intermediates.
(We/13.5/396)
(We/13.5/395)
The small GTPases Cdc42, Rac and RhoA have important regulatory roles
in mediating cytoskeletal rearrangments and cell growth. Thmr activity is
regulated by guanine nucleotide exchange factors (GEFs) which accelerate
their GDP/GTP exchange rate, and thereby activate them. Rho-GEFs share a
Dll (Dbl-homology domain) domain responsible lbr the enzymatic activity,
[bllowed by a PII domain. Trio is a multifunctional protein that is
comprised of two functional Rho-GEFs domains and a serinc/threonine
kinase domain. We have shown in vitro and in vivo that the first GEl:
domain (GEFDI) activates Racl, while the second GEF domain (GEFD2)
acts on RhoA. Moreover, co-expression of both domains activates
simultaneously both GTPases. Thus Trio is the first example of a twoheaded exchangc factor, able to link Rac and Rho pathways in vivo.
Most interest has been focused on PH domains which are thought to be
involved in cellular localization and protein/protein interactions. The study
of Trio, with its two GEF domains, is appropriate for a better understanding
of the role of the PH domains in GTPase activation. We have addressed this
issue by two different approaches. First, using deletion mutants of Trio
where the PH domains have been deleted or swapped, we have shown that
the P i l l of Trio 1) is necessary for Rac activation by the GEFD1 and
cannot be replaced by the PH2 domain; 2) targets mutants to the
cytoskeleton and 3) surprisingly, mediates a Rac-dependent stimulation of
JNK activity in the chimeric construct DH2PH1. In contrast, the PH2
domain is dispensable for Rho activation by the GEFD2 domain, suggesting
that these two PH modules play a different role in GTPases activation by
Trio. Second, using a two-hybrid screen, we have shown that: 1) the GEFD1
binds the actin cross-linking protein filamin; 2) this binding is dependent of
the presence of the PH1 domain.
Taken together these data suggest that the PtlI domain is necessary for Rac
activation by Trio, probably by targeting Trio to the eytoskeleton close to
Rac and its effectors via interaction with the actin-binding protein filamin.
Those data are consistent with a role of Trio in actin cytoskeleton
remodeling.
(W~/13.5/397) Functionalproperties of the helical domain of the Gsa subunit.
EcheverrIa ,V**.,Toro, M J*. mad Olated**.*Molecular Biology
Department.Universityof Concepcion,Chile.** Biochemistry I~1
MolecularBiology Department.AlcalfiUniversity. Spain.
Abstracts FEBS'99
(We/13.5/398)
s380
(We/13.5/399)
RhoG is a member of the Rho family of GTPases that shares 72% and
62% sequence identity with Racl and Cdc42Hs, respectively. RhoG protein is
mainly associated with endoplasmic reticulum membranes, with a minor fraction
located at the plasma membrane. RhoG activation elicits the formation of
lamellipodia, microvilli and filopodial extensions, resulting from the independent
activation of Racl and Cdc42Hs GTPases. In addition, microtubule
depolymerization impairs RhoG translocation and activity, but has no effect on
Racl and Cdc42Hs activities~ suggesting that a microtubule-dependent target
mediates RhoG activity. Using a yeast two-hybrid screen, we characterized the
156 kDa kinectin as a potential RhoG target. Kinectin is an integral protein of the
endoplasmic reticulum (ER), acting as a receptor for kinesin, a microtubule
motor involved in plus-end dependent forward transport. In the yeast, kinectin
binds the GTP-bound form of RhoG, and to a lesser extent of Rac 1, Rac2, RhoA
but not RhoB and Cdc42Hs. Two kinectin domains (KID) are responsible for the
interaction : KiD1 specifically binds RhoG and Rac and is located within the
central region of kinectin, which contains seven 70 a.a. coiled-coil repeats and is
involved in kinectin homodimerization. Two repeats are sufficient to promote an
efficient binding. The second domain (KID2) is located at the C-terminus and
mediates the binding to RhoA. In REF-52 fibroblasts, the kinectin co-localizes
with RhoG and RhoA, but not Rac. Expression of KiD1 and KiD2 respectively
inhibits RhoG and RhoA, but has no effect on Rac and Cdc42Hs activities. In
addition, kinectin redistributes into distinct subcellular locations depending on
whether RhoG is activated or inhibited. Kinectiu therefore fits all the criteria of a
genuine RhoG target. To address the role of RhoG in microtubule-dependent
transport, we examined the effects of RhoG activity on the exocytic pathway of
the vesicular stomatis virus glycoprotein (VSV-G). RhoG inhibition prevented
the secretion of the VSV-G protein, which redistributed with RhoG and kinectin
in particular cytoplasmic structures, distinct from ER to Golgi intermediate
(ERGIC), cis-, medial- and trans-Golgi compartments.
Our data therefore establish that kinectin behaves as a genuine RhoG
effector and suggest that RhoG promotes its effects through the control of a
microtubule-dependent vesicular transport.
(We/13.5/400)
(We/13.5/401)
s3 81
(We/13.5/402)
Abstracts FEBS' 99
(Wed13.5/403)
We are mveshgatmg possible mechanism of human uterine smoolh muscle contraction that may
contribute to early contractions associated with premature laboudl] One putafive mechanism is
calcium sensitization which has been demonstrated in vascular smooth muscle[2]. Calcium
sensitization is medlaled via receptor activation of the small GTPase signalling pathwayresulting
in the activationof the Rho-bindmgserine/threoniaeprotein kinase(ROK) AcfivatedROK mediates
(i) phosphorylahonof the regulatory myosin light cham(MLC2o)thereby bypassing the need for
calcmm-calmoduhn actwafionof myosin light chain kinase in smooth muscleconttaction[3]and (~l)
phosphorylation of MLCz0phosphalase Ihereby temporally sustaining MLC~ophosphorylalion[4]
Thus when smooth muscle is 'calcium sensd,zed'the calcium concentration required to initiate a
contraction rs lowered Therefore it follows that the concentrationof a calutum-moblhzmgagonist,
such as oxytocm,is also lowered
To determine whether calcium sensitization operales m myomelrial smooth muscle we first
determined the levels of RheA, ROK and MLC2oprolem expression in human nonpregnanland
pregnant myomelnaitissue. Using Western immunoblottmgwe detected Rhea protein expression
in both nonpregnantand pregnant tissue The apparent levels of expression were slmdar when
expressed per mg protein Howeverwhen expressedper mg DNA (to compensale for the known
muscle hypertrophy and hyperplasla of pregnant myomelnum) the level of Rhea protein
expression was slgmficanllyhigher m pregnantmyometnum Similarly,expressionof ROK per mg
DNA is higher in pregnant myometnum than in nonpregnant myometrium Hence m human
pregnancy there is increased expression of Rhea and ROK proteins These results are in
agreement wdh dala showing that Rhea and ROK mRNA expressionincreases in pregnantrat
myometnum[5] In addition we have found that the level of MLC~ proteinexpression is higher in
human pregnant myomeldurn than in nonpregnant myometrium The functional significance of
increased uterine RhoNROK proletn expression m pregnancy and parturillon Is under
investigation
(We/13.5/405)
The Rap group of proteins belongs to the Ras superfamily and shares
approximatively 50% o f identity with the products o f Ras protooncogenes. This group consists of the 95% identical R a p l A and R a p l B
proteins which globally share 60% identity with the 90% homologuous
R a p 2 A and Rap2B proteins. To date, the role in signal transduction o f
Rap2 proteins remains unclear.
A previous two hybrid screen had led to the identification o f a putative
effeetor specific o f Rap2 that is highly expressed in brain. We have
extended our search by screening a cDNA library from the T l y m p h o m a
cell line Jurkat with the full length wild type Rap2B protein as a bait, and
have identified the three known exchange factors for the small G protein
Ral, RaI-GDS, RGL and Rlf proteins (RalGEFs) as potential effectors. In
the screen, we have isolated the C-terminal Ras/Rap interaction domain
(RID) o f these proteins which interacts in the yeast two hybrid system as
well as in vitro with the GTP-bound forms o f H-Ras, R a p l , Rap2
proteins. Such promiscuity o f interaction is not limited to the C-terminal
RIDs of the RalGEFs, since the full length forms interact also with these
three GTPases in the two hybrid system and in in vitro assays.
In viva, upon transfection o f both a RalGEF and a GTPase into HEK 293
or HeLa cells, activated form o f Ras and Rap2 can be coimmunoprecipitated with full length RaI-GDS and Rlf proteins. Moreover,
immunofluorescence experiments showed that activated form o f Ras and
Rap2 proteins recruit cytosolic RalGDS and Rlf to their respective
resident compartiment, i.e. Ras to the plasma membrane and Rap2 to the
endoplasmic reticulurn. However, in viva, only RaI-GDS and Rlf
recruitement by Ras was able to lead to the activation of their target, the
Ral GTPase. Interestingly, Rap2/RalGEFs complexes don't block the Ral
activation by Ras. Whether the recruiternent o f RaI-GDS and Rlf to the
membrane o f the endoplasmic reticulum via Rap2 triggers other cellular
responses is presently under investigation.
Reference : V. Nancy and al. (1999) J BioL Chem. 274, 8737-8745
Abstracts FEBS'99
(We/13.5/406
s382
(We/13.5/407)
Adcnylyl cyclases (AC) catalyse the conversion of ATP to the second messenger
cAMP m response to tile actions of hormones and drugs upon cell surface
receptors. At present, ,line isoforms of AC have been described and may t~e
assigned into one of four groups according to the,r modes of regulation. Group
I ACs (types I, I11 and VIII) are stimulated by calcium and ealmodulin, whdst
Group 2 isoforms (II, IV and VII) are activated by G-protein [3y subunits and
protein kinasc C phosphorylation. Group 3 ACs (V and VI) are inhibited by low
calcium concentratim~s, whilst the Group 4 isoform AC IX is insensitive to
either calcium or [~y subumts, but is inhlbltcd by calcineurin.
T h e exact n'lechaniMn(s) necessary tol uKunlaining tile nterus ill a quiescent state
during gestation, and the transition to the contractile state required for parturition
iemam unknown, however, elevated cellulm" cAMP is known to promote
myometnal relaxatkm lhrough effects on intracellular calcium concentration and
myosin hght chain kinase. Characterisation of the AC isoform(s) present in both
pregnant and non-pregnant myometrium may allow identification of factors
inw~lved in the activation or inhibition of AC activity, and hence enable a more
efficaciotts pharmacological approach to lhe atleuuaUon of prcterm labour.
hmnunoblotting and immunocytochemistry, using a range of spectfic anubodies,
and RT-PCR were utilised to verify the presence of var,oos AC isot~arms and the
mRNA coding lot fllem m nryometrium. Messenger RNAs coding [~w AC
I~,OfOl'tI1~, I. II alld IX wclt~ presell| ill saml>le,~ o f inymneUla] tls.~lJe fron/ bolh
pregnant and non-pregnant WOlrlCn and cultured lnyolnelrltl} cell>. Western blot
(We/13.5/408)
(We/13.5/409)
The Rho-family GTPases Cdc42, Rac and RhoA are involved in a wide
vari. y of physiological processes, all implying a structural reorganisation of
the :tin cytoskeleton. They are activated by guanine nucleotide exchange
fact. "s (GEFs) which accelerate their GDP/GTP exchange rate. Rho-GEFs
shar a catalytic DH (Dbl-Homology) domain, followed by a PH (Pleckstrin
Hor. ~logy) domain, which is thought to be involved in protein localisation
and r in protein-protein interactions. Recently, the three dimensional
stru ure of Rho-GEFs has been solved, and functionally important residues
of tr~ DH domain have been identified. However, the mechanistic details
dete nining the specificity of a given GEF towards its target are poorly
und stood.
Trio is a multifunctional protein that is comprised of two functional
Rho 3EFs and a serine/threonine kinase domains. It has been shown in vitro
and .7 vivo that the first GEF domain (GEFDI) activates Racl, while the
sect ~d GEF domain (GEFD2) acts on RhoA. Moreover, co-expression of
botl domains activates simultaneously both GTPases. Thus, Trio is the first
exa ,pie of a two-headed exchange factor, able to link Rac and Rho pathways
in v 'o. Trio, with its two GEF domains of different specificity, is a good
mot "1 to study the molecular mechanisms determining the binding specificity
ofa 3EF towards its GTPase, and the role of the PH domains in this context.
In t, is purpose, we have started to develop new molecular tools, peptide
inhi' itors, targeting specifically the two DH-PH domains of Trio. To date, no
Rhe GEF inhihitors exist. Using a recently developed strategy in yeast, based
on
two hybrid screen, we have already isolated peptides, which bind
spe, 'fically either Trio GEFD1 or GEFD2, and are currently testing their
inhi ,itory effects on GTPase activation by Trio in vitro and in vivo. These
pep,:de inhibitors of Trio will allow us to determine the regions and amino
acid" critical for the specificity of a GEF towards a given GTPase.
s383
(We/13.5/410)
Abstracts FEBS'99
(We/13.5/411)
RhoG is a member of the Rho family of GTPases that shares 72% and
62% sequence identity with Racl and Cdc42Hs, respectively. RhoG protein is
mainly associated with endoplasmic reticulum membranes, with a minor fraction
located at the plasma membrane. RhoG activation elicits the formation of
lamellipodia, microviUi and filopodial extensions, resulting from the independent
activation of Racl and Cdc42Hs GTPases. In addition, microtubule
depolymerization impairs RhoG translocation and activity, but has no effect on
Racl and Cdc42Hs activities, suggesting that a rnicrotubule-dependent target
mediates RhoG activity. Using a yeast two-hybrid screen, we characterized the
156 kDa kinectin as a potential RhoG target. Kinectin is an integral protein of the
endoplasmic reticulum (ER), acting as a receptor for kinesin, a microtubule
motor involved in plus-end dependent forward transport. In the yeast, kinectin
binds the GTP-bound form of RhoG, and to a lesser extent of Rac 1, Rac2, RhoA
but not RhoB and Cdc42Hs. Two kinectin domains (KID) are responsible for the
interaction : KiD1 specifically binds RhoG and Rac and is located within the
central region of kinectin, which contains seven 70 a.a. coiled-coil repeats and is
involved in kinectin homodimerization. Two repeats are sufficient to promote an
efficient binding. The second domain (KID2) is located at the C-terminus and
mediates the binding to RhoA. In REF-52 fibroblasts, the kinectin co-localizes
with RboG and RhoA, but not Rac. Expression of KiDI and KiD2 respectively
inhibits RhoG and RboA, but has no effect on Rac and Cdc42Hs activities. In
addition, kinectin redistributes into distinct subcellular locations depending on
whether RhoG is activated or inhibited. Kinectin therefore fits all the criteria of a
genuine RhoG target. To address the role of RhoG in microtubule-dependent
transport, we examined the effects of RhoG activity on the exocytic pathway of
the vesicular stomatis virus glycoprotein (VSV-G). RhoG inhibition prevented
the secretion of the VSV-G protein, which redistributed with RboG and kinectin
in particular cytoplasmic structures, distinct from ER to Golgi intermediate
(ERGIC), cis-, medial- and trans-Golgi compartments.
Our data therefore establish that kinectin behaves as a genuine RhoG
effector and suggest that RboG promotes its effects through the control of a
microtubule-dependent vesicular transport.
Abstracts FEBS'99
s384
INDUCTION
OF
POLYPHENOL
OXIDASE
IN
(We/15.3/413)
(We/15.3/414)
(We/15.3/415)
Leaves of maize, pea and barley plants were examined to determine the
mechanisms of influence oflow oxygen pressure and resistance to it. Structural
and functional changes in photosynthetic apparatus of mesophyl took place in
conditions of hypobaric hypoxia. The character of the response was
p~sumably dependent on dura~on of action. The assembling of photosynthetic
apparatus in the postetiolated seedlings was followed by lower of green and
yellow pigments production, low photochemical and ribulosobiphosphate
carboxylase activities, appeasence of
pyruvatekinase),
pentose
phosphate
pathway
(gluco~-6-phosplmte
s385
(We/15.3/416)
Abstracts FEBS'99
(We/15.3/417)
(We/15.3/419)
Abstracts FEBS'99
(We/15.3/420)
s386
(We/15.3/421)
(We/15.3/422)
Nickel is essential for plant growth but is also highly toxic upon increase in
its concentration. The molecular mechanisms involved in metal resistance are
unknown. To isolate genes involved in plant resistance to nickel toxicity, the
yeast S a c c h a r o m y c e s cerevisiae was transformed by a cDNA library
constructed from maize roots mRNA in the multicopy plasmid pYPGEI5.
One maize cDNA improved growth of transformed yeast when plated on a
modified minimum medium containing NiSO 4 0,5 raM. The resistance
conferred by this plasmid was specific to nickel, cobalt and to a lesser extent
to cadmium. This maize cDNA encoded a polypeptide of 19,9 kDa showing
homology to the high mobility group proteins of subclass HMG I/Y [1]. The
protein contains four copies of the AT-hook DNA binding motif which
mediates the interaction between HMG I/Y proteins and AT-rich sequences
within plant promoters [2]. However, the function of HMG I/Y protein
remains not well known. Western blot analysis demonstrated that the
resistance to nickel was due to the expression of the maize c D N A in yeast.
Nickel resistance in yeast was maintained even when the HMG I/Y protein
was expressed from a monocopy ptasmid. In perspective, the involvement of
the HMG protein in metal resistance in plants will be further investigated by
the overexpression of the isolated maize HMG cDNA in plant cells.
References:
1 - Nieto-Sotelo J., Ichida A. et Quail P. H., Plant Cell, 6, (1994) 287-301
2 - K.D. Grasser, The Plant Journal 7 (2) (1995), 185-192
s387
(We/15.3/424)
Abstracts FEBS'99
(We/15.3/425)
(We/15.3/426)
(We/15.3/427)
Abstracts FEBS'99
(We/15.3/427)
s388
(We/15.3/428)
(We/15.3/429)
(We/15.3/430)
s389
(We/15.3/432)
Abstracts FEBS'99
(We/15.3/433)
Spices and herbs have been used in seasoning of foods since very ancient
times, to enhance savoriness of foods, and are valued both as flavoring
agents and for properties like stimulation of appetite by increasing
salivation, their carminative, preservative and antio\idant action in some
tbods, delaying the onset of lipid oxidation and thereby food deterioration
Since the use of synthetic antioxidants like BHA and BHT is graduall~
decreasing because of fears of their possible mutagenity and consumer's
rejection of synthetic chemicals, and also in parallel with the growing
consumer interest in "'natural" products, there is a growing demand for
natural antioxidative substances to replace the conventional commercial
antioxidants
The spices from the Labiateae family, notably Salvia offictnah~(sage), are
especially well-known for their antioxidative properties
Major
antioxidants identified in sage are the phenolic compounds like rosmarinic
acid, carnosic acid and its derivatives(carnosol,rosmanol isomers,
rosmadial and methyl carnosate) Rosmarinic acid and carnosic acid are
very active antioxidants and are greatly responsible for the antioxidative
efficiency of sage
This study was undertaken to investigate the possibilities of preparation of
an odorless and flavourless natural antioxidant extract from a natural
Turkish spice, sage, using supercritical fluid extraction(SFE), as well as to
evaluate the antioxidative power of this extract by applying a rather
unconventional
a n a l y t i c a l technique, differential scanning
calorimetry(DSC) A high recovery of a natural product with significant
antioxidative activity was obtained which was used as an antioxidant in
treating sunflower seed oil for delaying the onset of its induction period,
thus extending its shelf-life.
(We/15.3/434)
(We/15.3/435)
(We/15.3/436)
Salt tolerant
s390
t r a n s g e n i e tobacco generated f o r
(We/15.3/437)
Louts
1) Tijet N., Helvig C., Pinot F., Le Bouquin R., Lesot A., Durst F., Salatin J-P.,
and Benveniste I. (1998) Biochem. J. 332, 583-589.
(We/15.3/438)
(We/15.3/439)
s391
(We/15.3/440)
(We/15.3/441)
(We/15,3/443)
Phenolics are principal chemicals of cereal defence against aphids, since they
are high toxic and reduce their growth and reproduction [1]. However, the
aphids are able to survive and reproduce on cultivars with relatively high
content of these allelochemicals.
The present paper relates the grain aphid Sitobion avenae (Fabr) and the bird
cherry-oat aphid Rhopalosiphum p a d i (L) performance on cereals to activity
of their detoxifying enzymes including several oxidoreductases and 1I phase
transferases.
The aphids' polyphenol oxidase was able to oxidise most of the cereal
o-dihydroxyphenolics e.g. gallic acid, caffeic acid, protocatechuic acid,
chlorogenic acid, (+) catechin and quercetin [2]. Complementary peroxidase
beside listed o-dihydroxyphenolics oxidised also methoxyphenolics such as
ferulic acid and sinapic acid [3]. Both oxidoreductases act mostly in plant
tissues due to the action of secreted aphids' saliva as well as within their
alimentary canal. Among the second phase transferases UDP-glucosyl
transferase that conjugates some of the o-dihydroxyphenolics and also
monophenolics e.g. p-hydroxybenzoic acid and p-coumaric acid not oxidised
by the oxidoreductases was found. In addition, highly active
sulfotranspherase and phosphotransferase were detected in cytosol of the
aphids' midgut.
In summary, oxidation and conjugations to glucose, sulfate and phosphate are
the major steps in the metabolism of the plant phenolics by the aphids.
The significance of these defensive mechanisms for the natural cereal
resistance to aphids is discussed.
[1] Leszczynski B et al , Insect Sci Appl., 6, (1985) 157.
[2] Urbanska A. et.al., EntomoL Exp. Appl., 86, (1998) 197.
[3] Urbanska A. et.al., In: Aphids in natural and managed ecosystems
(J.MNieto Nafria and A F.G Dixon, eds), Le6n (Spain), (1998) 119
Abstracts FEBS'99
s392
(We/15.3/445)
Over the past decade, nitric oxide (NO) was found to have important signaling
functions in a number of mammalian physiological and pathophysiological
processes including inflammation, immune regulation and programmed cell
death. NO signaling studies in plants are now generating a wealth of
comparative information [1,2]. We demonstrated that infection of resistant, but
not susceptible, tobacco with tobacco mosaic virus (TMV) resulted in enhanced
endogenous NO synthase (NOS) activity. In addition, TMV induction of the
defense-related gene PR-1 was blocked by L-NMMA, a NOS inhibitor.
Furthermore, administration of NO donors or recombinant NOS to tobacco
suspension ceils or leaves triggered expression of the genes encoding PR-1 and
phenylalanine amonia-lyase (PAL), the first enzyme of the phenylpropanoid
pathway. Interestingly, NO-activated PR-1 expression was salicylic acid (SA)
dependent while PAL induction was not. These genes were similarly induced
by the second messengers of mammafian NO signaling cascade, cGMP and
cADPR. Consistent with a role of cGMP in cell signaling, NO treatment
resulted in a dramatic and transient increase in endogenous cGMP levels.
Furthermore, cGMP induced PAL expression while NO-induced PAL
activation was suppressed by the guanylate cyclase inhibitors LY 83583 and
ODQ. In addition, experiments with the calcium channel blocker ruthenium-red
suggest that cADPR mediates cGMP action through a Ca2 release mechanism
and/or that cGMP and cADPR act in parallel to produce a synergistic effect on
gene expression.
In animal cells, besides guanylate cyclase, cytoplasmic and mitochondfial
aconitases are important cellular targets of NO and NO-derived species. Both
enzymes are particularly sensitive to inactivation by NO produced during
various pathological conditions. We found that tobacco aconitase, like its
mammalian counterpart, is inhibited by NO and may be a key redox sensor in
plants. Moreover, the pathogen and SA-activated tobacco MAP kinase, SIPK
(SA-Induced Protein Kinase) was also activated by NO in a SA-dependent
manner.
In summary, we conclude that important components of animal NO signaling
are also present in plants.
[1] Delledonne et al., Nature, 394, (1998), 585.
[2] Durner et al.., Proc. Natl. Acad. Sci. USA, 95, (1998), 10328.
s393
Abstracts FEBS'99
(Wed18.2/447)
Embryonic stem cell (ES cell) technology and the generation of transgemc mine
have become a widespread tool to investigate gene functmn in animal models. In
parallel, m vitro differentiation of ES cells in embrymd bodies has been proven to
be a powerful model system, somehmes giving the possibdity to reveal
phenotypes which were hidden in vivo [1]. In embryoid bodies ES cells
differentmte into a variety of cell types, including all three muscle types (skeletal,
smooth and cardiac muscle), fibroblasts, neurones or endodermal cells.
We focused our interest on the development of cardiomyocytes in embryoid
bodies, particularly on factors leading to the commitment of cardiomyocytes and
maintenance of the cardiac phenotype. One of these proteins is desmin, a class III
intcrmedmte filament protein which is one of the earliest myogcmc markers with
expressmn starting at 7.25 days post coitum in the developing heart of murme
embryos. This suggests a possible role of dcsmm in cardmmyocyte development.
To address this issue ES cells were generated, expressing desmm ectoptcally
under control of the rous sarcoma vires promoter. Embryold bodies made from
wild type and transgemc ES cells were compared for development of beating
cardmmyocytes. Desmin expression led to an increased formation of
cardmmyocytes.
In previous experiments we had further observed that the presence of feeder cells
expressing leukaemm inhibitory factor (LIF) [2] somehow influences the
development of beating cardiomyocytes. LIF is a member of the IL-6 cytokme
family activating internal signals via binding to a heterodlmer consisting of the
LIF-receptor and the transmembrane protein gpl30 [3]. To elucidate the role of
this cytokine, recombinant L1F, feeder cells expressing LIF and antl-LIF
antibodies respectively have been added to the culture medium of embryoid
bodies. These experiments demonstrated that LIF promotes survival of
cardmmyocytes leading to an increased longevity of cardmmyocytes in vitro
[1] Weitzer, G. et al., Developmental Biology, 127, (1995) 422; [2] Gearing, P.D.
et al.EMBO Journal, 6, (1987) 3995; [3] Dam, Ch. et al., Developmental Biology,
203, (1998) 149
(Wed18.2/448)
(We/18.2/449)
Abstracts FEBS'99
(We/18.2/450)
s394
(We/v/451)
(We/18.2/452)
Talin is a key protein localized in adhesion plaques and appears to link actin
filaments to integrins. Its interaction with lipids could be of importance for
talin dependent actin nucleation. PIP2 is involved in the organization of the
actin cytoskeleton by regulating several actin-binding proteins. We provide
evidence that the binding of PIP or PIP2 on talin induce a dramatic
conformational change of the protein. This effect might be relevant to a
physiological process since both phosphoinositides become associated with
talin upon platelets adhesion on fibrinogen. Furthermore, talin is able to
coprecipitate with PIP once HeLa cells are in suspension, whereas it
associates transiently with PIP2 after ten minutes of adhesion on fibronectin,
a starting-time for HeLa cells spreading. Finally upon clustering of c~,f~,, the
interaction of talin with the cytosolie tail of the integrin seems to be enhanced
with the presence of the phosphoinosJtides. Our results support the
hypothesis that interaction between talin and phosphoinositides could be
involved in the regulation of actin cytoskeleton by integrins.
(We/18.2/453)
s395
(W~18.~454)
Abstracts FEBS'99
The r o l e o f e y t o s k e l e t o n
in formation of terminally
differentiated uroeplthelial cells
P. Verani~, R.Romih, K.Jezernik, M.Peni~nik
Institute of Cell Biology, Medical Faculty,
Lipi~eva 2, 1000 LJublJana, Slovenia
The o r g a n i s a t i o n
of a c t i n f i l a m e n t s and e x p r e s s i o n
of
cytokeratins
w e r e s t u d i e d in rat u r i n a r y b l a d d e r
during epithelial
cell d i f f e r e n t i a t i o n
which followed
the d e t a c h m e n t
of c e l l s i n d u c e d by e y c l o p h o s p h a m i d e
(CP). It was e s t a b l i s h e d
t h a t in b a s a l and i n t e r m e d i ate c e l l s the a c t i n f i l a m e n t s
surrounded
the w h o l e
c e l l s b e n e a t h the p l a s m a m e m b r a n e ,
w h i l e in t e r m i n a l l y
differentiated
superficial
c e l l s the a c t i n f i l a m e n t s
w e r e f o u n d in l a r g e a m o u n t s o n l y at the b a s o l a t e r a l
membrane.
A f t e r s h e d d i n g of e p i t h e l i u m
c a u s e d by CP
the r e m a i n i n g
basal cells recovered
a normal urothel i u m in 7 to 8 days. D u r i n g r e p a i r we c o u l d f o l l o w
the r e a r r a n g e m e n t
of a c t i n f i l a m e n t s
in c e l l s at the
l u m i n a l s i d e of u r o t h e l i u m
f r o m a s t a g e w h e r e the
actin filaments
equally surrounded
the w h o l e c e l l s to
a final stage where they disappeared
f r o m the a p i c a l
p a r t of the c e l l s . T h i s p r o c e s s was a c c o m p a n i e d
by a
c h a n g e in a set of c y t o k e r a t i n s ,
a l s o . The c y t o k e r a t i n
17 w a s r e p l a c e d w i t h e y t o k e r a t i n
20, w h i c h c o u l d be
f o u n d o n l y in s u p e r f i c i a l
cells.
Our r e s u l t s p r o v e d that in a p r o c e s s of d i f f e r e n t i a t i o n of s u p e r f i c i a l
urothelial
c e l l s the m a j o r c h a n g e s
t o o k p l a c e in the s t r u c t u r e of a p i c a l m e m b r a n e w h e r e
the a s y m m e t r i c a l
unit membrane
(AUM) is f o r m e d s i m u l taneously
w i t h the d i s a p p e a r a n c e
of a c t i n f i l a m e n t s
b e n e a t h it. The r e a r r a n g e m e n t
of o y t o s k e l e t a l
elements
therefore
a p p e a r to be s t r o n g l y r e l a t e d to the s t a t e
of c e l l d i f f e r e n t i a t i o n .
(Wed18.2/456)
(We/18.2/457)
R.Sullivan, A.Koffer
Dl,pt t'h~ wolo,vl. UJlil el~i 0 College L~mdon. London WCIE 6J,I, I/K
Abstracts FEBS'99
s396
for the
detection of M y c o b a c t e r i u m tuberculosis
V. Baumanis*, I. Jansone*, O. Marga**. L.Broka***,
T. Pan~aka*, I.Mandrika*
*-B~omed Res.& Stud)" Centre Unlv of Latvia, Ratsupaes ],Rtga,
Latvta, L V1067, **MedAcadLatvia, *** -Tub.Center of Latvia(TC)
The rapid detection of :klycobacterium tuberculosis from
respiratory specimens and bronchial washings is critical for
optimal treatment of patients. Incidence of tuberculosis and its
drug resistance has been increased in Latvia from 27.4 per
100.000 population in 990 till 74 in 1998. In TC amplification
of IS6110 fragment by in-house polymerase chain reaction (PCR)
, ligase chain reaction of 38kDa protein gene fragment by Abbott
amplification kit LX (LCR) was introduced therefore and results
of both amplification methods analysed and compared with the
BACTEC cultivation , smear microscopy, clinical findings as
well. IS6110 PCR in 95-100% cases confirmed other three
methods , but was the most sensitive likely due to presence of
more than one copy of IS6110 in the clinical isolates studied.
Detection of rifamicin resistance of cultivated bacteria was
screened by the single strand conformation polymorphism
analysis and confirmed by Inno-LIPA test (Murex). Missence
mutations in Asp516
and His 526 positions were found.
Determination of drug resistance in the clinical material by costeffective molecular methods needs to be improved however.
(We/19.2/460)
Beet necrotic yellow vein virus is the causative agent of sugar beet
rhizomania and belongs to the benivirus family. The virus requires at least
three proteins for its cell-to-cell movement. These proteins, (42, 13 and 15
kDa), are encoded by a triple gene block cluster present on RNA-2.
Independent expression of movement proteins is possible by using
replicon RNA-3, a viral vector derived from RNA-3. Such replicons
expressing movement proteins are able to complement defective BNYVV
RNA-2 mutants.
Enhanced jellyfish fluorescent protein (eGFP) was fused either to the Nterminal or C-terminal extremities of wild type P42 B N Y V TGB1
protein. In order to study their cellular localization, transcripts of RNA 3
replicons carrying each contruct were inoculated together with RNA I and
wild type or TGB defective RNA 2 into Chenopodium quinoa protoplasts
and plants. Fluorescence was observed both in protoplasts and plants but
complementation occured only if eGFP was fused to the N-terminus of the
protein. Microscopy studies revealed no particular localization of GFP-P42
fusion protein in C. quinoa protoplasts. On the contrary, fusion protein
was localized in the cell wall of plant cells when expressed by the virus
during the infection cycle. Electron microscopy studies localized the GFPP42 fusion protein within the plasmodesmata. In the absence of P13
and/or P15, GFP-P42 protein lost its capability to localize within the cell
wall, suggesting a possible interaction with the two other TGB proteins.
(We/19.2/459)
s397
(We/19.2/462)
Abstracts FEBS'99
(We/19.2/463)
(We/19.2/464)
Abstracts FEBS'99
(We/19.2/466)
s398
2+
(We/19.2/468)
(We/19.2/467)
(We/19.2/469)
s399
(We/19.2/470)
Abstracts FEBS'99
(We/19.2/471)
(We/19.2/472)
(We/19.2/473)
Abstracts FEBS'99
(We/19.2/474)
s400
(We/19.2/475)
(We/19.2/476)
BLOOD
STAGE
MALARIA
INFECTION
INTERLEUKIN-I DEFICIENT MICE
R. S.-P. TAN~, Y. MATSUMOTO ~, A. U. KARA a
~l~lt~l Parasttot Lab. l)ept of BtoL Sct. Natzonatl lmv r f ,S'mgapore. ,S~gainwe.
~l)epl ofMo! lmmunol. ,~'h. of'AgncTdtureand Ltfe Sct. linty ofT?~k5,o"Japan
(We/19.2/477)
Slructuralcharacterization of
Saccharomyces cerevisiae priori-like protein Ure2
s401
(We/19.2/478)
Abstracts FEBS'99
strains
(We/19.2/480)
sordellii), an inhibitor of Rac as well as Ras and Rap, potently disrupts the
(We/19.2/479)
Baculoviruses, which are lepidopteran viruses, have dynamic genomes that are
capable of rearrangements and recombination during propagation in their hosts.
Nonhomologous recombination with sequences originating from the host
genome occurs under normal propagation conditions. This unique and
particular feature among eukaryotic viruses will offer an advantageous model to
study the molecular mechanisms of the virus-host interaction. Among those
viral sequences which should have derived from the host, the hr (homologous
region) sequences are particularly interesting. Indeed, they should be
implicated in the viral replication as well as in viral enhancer activities. The hr
sequences contain potential sites for the binding of host factors. Thus, in order
to study the part of the host in the viral cycle, we searched for specific
interactions between the hr sequences and host-cell factors. Electrophoretic
Mobility Shift Assay experiments were done with nuclear extracts from various
lepidopteran cell lines. Comparisons were done between infected (AcMNPV
baculovirus) and non-infected cells. Our results suggest specific interactions
between host factors and the hr sequences. The role of these binding in the
baculovirus cycle needs to be further determined.