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Student's T-Test Guide with R

This document provides an overview of statistical tests used to compare means, including z-tests, single sample t-tests, dependent t-tests, and independent t-tests. It explains that t-tests are used when the population standard deviation is unknown. The dependent t-test, also called the paired samples t-test, is used to compare the same subjects on two measures, by calculating difference scores. Key aspects of t-tests covered include observed and expected values, standard error, significance testing, p-values, effect sizes, and Cohen's d for estimating the magnitude of effect.

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Mahmoud Trigui
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0% found this document useful (0 votes)
81 views20 pages

Student's T-Test Guide with R

This document provides an overview of statistical tests used to compare means, including z-tests, single sample t-tests, dependent t-tests, and independent t-tests. It explains that t-tests are used when the population standard deviation is unknown. The dependent t-test, also called the paired samples t-test, is used to compare the same subjects on two measures, by calculating difference scores. Key aspects of t-tests covered include observed and expected values, standard error, significance testing, p-values, effect sizes, and Cohen's d for estimating the magnitude of effect.

Uploaded by

Mahmoud Trigui
Copyright
© © All Rights Reserved
We take content rights seriously. If you suspect this is your content, claim it here.
Available Formats
Download as PDF, TXT or read online on Scribd

Intro to Statistics with R: Students T-test

Statistical tests
to compare means

Intro to Statistics with R: Student's t-test

Tests to compare means

z-test

t-test (single sample)

t-test (dependent)

t-test (independent)

Intro to Statistics with R: Student's t-test

Statistical tests

Compare observed to expected

Relative to standard error (SE)

Important to know when each test applies


z = (Observed - Expected) / Standard Error
t = (Observed - Expected) / Standard Error

Intro to Statistics with R: Student's t-test

When to use z- and t-tests?

Uncommon to know population parameters

Won't focus on z-test or single sample t-test


Compares sample
SD of Population
mean to population
Known?
mean?
z-test

YES

YES

Single sample
t-test

YES

NO

Intro to Statistics with R: Student's t-test

Which t-test do you use?

Dependent t-test

Dierence between two related samples

E.g. same people measured twice

Independent t-test

Dierence between two independent samples

E.g. men vs women, drug vs. placebo

Intro to Statistics with R: Student's t-test

Observed, Expected, and SE


Observed

Expected

SE

z-test

Sample mean

Population mean

SE of the mean

t-test
(single sample)

Sample mean

Population mean

SE of the mean

t-test
(dependent)
t-test
(independent)

Population mean
Sample mean of
of dierence
dierence scores
scores
Dierence
Dierence
between two
between two
sample means population means

SE of the mean
dierence
SE of the
dierence
between means

Intro to Statistics with R: Students T-test

Sampling
distribution (1/2)

Intro to Statistics with R: Student's t-test

Sampling distribution

Hypothetical distribution of summary statistic

Multiple samples of the same size

Body temperature example

Multiple samples, 10 people each

Sampling error leads to slightly dierent means

Distribution of sample means will have a mean


close to population mean

Intro to Statistics with R: Student's t-test

Sampling distribution
In the case of a z-test

Mean of sampling distribution approximately equal to


mean of population

Standard deviation of sampling distribution (SD) is the


Standard Error (SE)

As sample size increases, standard error decreases


Central Limit Theorem

Intro to Statistics with R: Students T-test

Sampling
distribution (2/2)

Intro to Statistics with R: Student's t-test

Significance tests
Null Hypothesis Significance Testing (NHST)

Null hypothesis = "no eect"

No dierence between sample mean and population


mean Expected value = 0
Population SD
Standard Error =
Sq. root of sample size

Intro to Statistics with R: Student's t-test

Probability values

Probability value, or p-value

Conditional probability (assumes null hypothesis true)

As or more extreme than observed value

z-value

Expected

Actual

p-value

< 0.05

Intro to Statistics with R: Student's t-test

p-values with t-tests

Family of sampling distributions

For large samples:

Very similar to sampling distribution of z-test

t-value of 2 yields statistically significant result

For small samples:

Sampling distribution wider

t-value slightly greater than 2 required

Intro to Statistics with R: Student's t-test

Summary

z-tests and t-tests designed to compare means

(Observed - Expected) / Standard Error

Standard Error = dierence expected due to chance

Numerator at least 2x SE to claim significance

Intro to Statistics with R: Students T-test

Dependent t-test

Intro to Statistics with R: Student's t-test

Dependent t-test

Also known as paired samples t-test

Appropriate when same subjects being compared (i.e.


measured on same variable twice)

Calculate dierence score for each subject

Mean of dierence scores

Intro to Statistics with R: Student's t-test

Dependent t-test
Thorough analysis will include

t-value

p-value

Cohens d (eect size)

Intro to Statistics with R: Student's t-test

Dependent t-value
t = (Observed Expected) / SE
Mean of
Zero
dierence ("no eect")
scores

t = (Mean of dierence scores) / SE


Observed dierence relative to
dierence expected by chance

Intro to Statistics with R: Student's t-test

Eect size

Significance tests biased by sample size

When sample size is large, SE is very small

Small observed dierence may be "statistically


significant"

Eect size estimates magnitude of the eect

Intro to Statistics with R: Student's t-test

Cohen's d

d = (Mean of dierence scores) / SD

Divide by standard deviation, not standard error

Mean dierence in terms of standard deviation units

Cohen's d of 1 means people changed by one SD

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