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TM6SF2: Catch-22 and in others to cardiovascular dis- uniform abnormalities of serum lipids
ease.10 Determining why this occurs is or glycemic and anthropometric
in the Fight critical to making clinical recommen- traits.12 In particular, variants at the
Against dations based on personal rather than chromosome 19p13.11 locus associ-
population risk. ated with increased hepatic steatosis/
Nonalcoholic Although the exact cause of NAFLD NASH/brosis were also associated
Fatty Liver or NASH has not been elucidated, we with decreased serum LDL cholesterol
Disease and are now able to begin to understand and lower serum TGs,12,18,19 which
the genetic basis for the disease. was contrary to the usually observed
Cardiovascular NAFLD clusters in families,11 and its epidemiologic pattern of these traits.
Disease? heritability is estimated to be 26% Variants at 19p13.11 were not as-
27% for CT-measured hepatic stea- sociated signicantly with serum
Gastroenterology 2015;148:679684
COMMENTARIES
locus.12 This association has itself been
pressure; HOMA-IR, homeostatic model assessment for insulin resistance; LDL-C, low-density lipoprotein cholesterol; MAF, minor allele frequency in Europeans; NA, not
assessed in the study referenced; NASH, nonalcoholic steatohepatitis; SBP, systolic blood pressure; T2D, type 2 diabetes; TC, total cholesterol; TG, triglycerides; [,
ALP, alkaline phosphatase; ALT, alanine aminotransferase; AST, aspartate transaminase; CAD/MI, coronary artery disease/myocardial infarction; DBP, diastolic blood
NASH/Fibrosis
validated independently21,22 and other
studies have also associated the
TM6SF2 variant with decreased levels
of serum LDL cholesterol and TG20,23
NA
NA
NA
[
[
(consistent with the earlier reports12).
Studies have also described associa-
ALP/ALT/AST
tions of the minor allele at this locus
NA/NA/NA
NA/NA/NA
NA/NA/NA
NA/NA/NA
with increased serum alanine trans-
NA/[/NA
aminase, aspartate transaminase,20
Y/[/[
and increased risk of diabetes,24 with
decreased serum alkaline phosphatase
Fatty
and lower risk of myocardial infarc-
liver
NA
NA
NA
tion,23 atherosclerosis, and cardiovas-
[
cular disease22 (Table 1).
TC
NA
NA
NA
Because the association signal in
Y
the chromosome 19p13.11 region
TG
NA
covers >20 genes and the SNPs across
Y
this region are in high LD with one
LDL-C
another (highly correlated) and
NA
include both known (in TM6SF2, NCAN,
Y
CILP2) and yet to be discovered non-
HOMA-IR
synonymous SNPs, it remains to be
Table1.Association of Variants at chr 19p13.11 Locus With Manifestations of the Metabolic Syndrome
NSa
NA
NA
NA
NA
tiple correlated functional variants/
genes in the region. Toward this end,
Glucose
Fasting
NSa
NSa
NA
NA
NSa
NA
NA
NA
NA
NA
NSa
NA
NA
NA
NA
NA
NA
NA
Y
NA
NA
NA
[
Same SNP
Same SNP
Same SNP
0.798
With
0.97
0.98
exonic:TM6SF2:E167K
exonic:TM6SF2:E167K
exonic: NCAN:P92S
Gene: Protein
intronic: SUGP1
Change
rs1040196924
rs5854292623
rs5854292620
rs5854292621
Allele, MAF)
rs222860312
(T, 0.084)
(C, 0.09)
(C, 0.08)
(T, 0.07)
(T, 0.12)
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COMMENTARIES
very low-density lipoprotein (VLDL) TM6SF2, which is expressed more provide new insights into the mecha-
cholesterol secretion.20 In other inde- widely, may exert some of its effects nistic basis of progressive NAFLD, and
pendent work25 using confocal via its role in extrahepatic organs. the association between NAFLD and
microscopy, investigators observed TM6SF2 has highest expression levels cardiovascular disease. They suggest
localization of green uorescent pro- in the intestine, where alkaline that TM6SF2 is an important deter-
teintagged TM6SF2 to the endo- phosphatase is also expressed (in minant of clinical outcome across
plasmic reticulum in 2 human addition to the liver) and thus metabolic syndrome related end-
hepatoma cell lines. Additionally, TM6SF2 may inuence on serum organ damage. Indeed, current evi-
knockdown of TM6SF2 in both cell alkaline phosphatase via intestinal dence suggests that TM6SF2 may
lines resulted in reduced secretion of effects. The association between act as a switch with TM6SF2
TG-rich lipoproteins, apolipoprotein B, TM6SF2 rs58542926 and the NAFLD rs58542926 T-allele mediating hepat-
and increased cellular TG levels. At the phenotype spectrum from steatosis to ic retention of TG and cholesterol
subcellular level, a marked increase in advanced brosis/cirrhosis has now predisposing to NAFLD-brosis,
lipid droplet area, which could be been robustly demonstrated in several whereas C-allele carriage promotes
attributed to increases in both the large independent cohorts12,2022,25; VLDL excretion, protecting the liver at
number and average size of lipid however, 2 studies1 from China27 the expense of increased risk of
droplets, was reported. Conversely, and 1 from South America28have atherosclerosis and cardiovascular
overexpression of TM6SF2 caused a been unable to replicate these associ- disease (Figure 1). Thus, although in
decrease in the number and average ations. This may, in part, be owing to the general population, NAFLD is
size of lipid droplets.25 In parallel ex- the generally low minor allele fre- associated with an increased risk of
periments, Kozlitina et al20 also quency of NAFLD associating variants cardiovascular disease, these can
observed an increase in the size and in the 19p13.11 locus and interethnic become dissociated: individuals car-
number of lipid droplets in the livers of variations in their frequency of car- rying the minor (T) allele of TM6SF2
mice after knockdown of Tm6sf2. riage. Specically, the minor allele at rs58542926 (167K) may be prone to
These results suggest a role for rs58542926 (T), has a frequency of experience liver-related rather than
TM6SF2 in regulating the supply of 0.07 in Europeans, 0.04 in Hispanics, cardiovascular morbidity and mortal-
lipids for the synthesis of TG-rich li- and 0.02 in African Americans.29 Thus, ity.2,30,31 Corroborating this nding,
poproteins. Finally, RNAi knockdown the liver disease promoting allele at even though only about 0.5% of in-
of both TM6SF2 and NCAN in HeLa TM6SF2 will affect more individuals of dividuals of European ancestry in the
cells resulted in increased free choles- European ancestry than Hispanic or population are homozygous for the
terol,26 suggesting that the product of African ancestry. Inadequate statistical minor allele of TM6SF2, 1.5% of in-
>1 gene in this region may be involved power to detect an effect on histologic dividuals selected for having histo-
in hepatic lipid handling. markers of disease progression is a logic NASH/brosis have this
Not all the studies have unequivo- particular issue in the South American genotype, suggesting that carrying 2
cal ndings. Neither Kozlitina et al20 study,28 where only 226 NAFLD cases copies of the T allele predisposes to
nor Holmen et al23 observed changes with histologically mild disease were developing advanced liver disease.21
with serum alkaline phosphatase in the included. Of these cases, only 130 had In contrast, carriage of the C-allele is
mouse experiments described, con- anything more than bland steatosis, associated with multiple classic char-
trary to the results observed in but these cases exhibited a mean acteristics of the metabolic syndrome,
humans. Kozlitina et al20 reported brosis stage of only 1.4 out of 4, including dyslipidemia and cardiovas-
increased accumulation of hepatic TGs further degrading the sensitivity of the cular disease.23 Thus, carrying the T
in Tm6sf2 knockdown mice, whereas study. It is, therefore, not surprising allele protects against development of
Holmen et al23 found no evidence of TG that the authors were unable to detect dyslipidemia and cardiovascular dis-
accumulation in the livers of Tm6sf2 an association with features of steato- ease.23 Whether the effects of variants
knockdown mice. Kozlitina et al used hepatitis or brosis, whereas groups at the 167 position will be strong
adeno-associated virus knockdown, with larger cohorts have been enough to overshadow the effects of
whereas Holmen used adenovirus successful.12,21,22 many other environmental or genetic
knockdown of TM6SF2 in liver in The above functional studies variants on the risk of liver and car-
C57BL/6J mice. These differences in in vivo20,23 and in vitro20,23,25 suggest diovascular disease at an individual
hepatic steatosis may be owing to dif- that the TM6SF2 gene affects hepatic level, and so merit distinct medical
ferences between humans and mice, to lipid efux, with its deletion or mu- recommendations for patients car-
the short duration of gene-altering tation resulting in a reduction of li- rying this allele, remains to be deter-
studies in mouse livers, or to species- poprotein secretion (VLDL, TG, and mined. Nevertheless, studying the
or tissue-specic effects of TM6SF2. apolipoprotein B) coincident with effects of NAFLD-associated human
Targeting just the liver for knock- increased hepatocellular lipid droplet genetic variants on related metabolic
down/overexpression in mice, for size and TG content. The 19p13.11 traits promises to teach us much
example, may result in phenotypes locus overall, and the TM6SF2 about how these traits interrelate to
related to just this organ, whereas rs58542926 variant in particular, one another pathophysiologically.
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COMMENTARIES
Although we have learned many whole body, hepatic, or adipose tissue recommendations for disease treat-
things already from these discoveries, insulin sensitivity.31 Further research, ment in the future. Indeed, although
some interesting questions remain. perhaps utilizing stable global and genetic testing for common diseases is
The T allele of TM6SF2 rs58542926 tissue-specic knockouts of TM6SF2 in currently limited, this may change
has been associated with decreased mice, may help to clarify these ques- with a better understanding of how
alkaline phosphatase levels, but how tions. Even though there is evidence this information can be used to inform
the E167K change in TM6SF2 actually that the E167K mutation of TM6SF2 patient care.
results in this biochemical effect re- results in less VLDL in serum, the
mains to be determined. Interestingly, exact mechanism by which this occurs BRATATI KAHALI
knocking down hepatic TM6SF2 is not known. Because VLDL forma- University of Michigan
expression did not result in changes in tion requires a multistep process Ann Arbor, Michigan
serum alkaline phosphatase.20 Because where TGs are combined with apoli- YANG-LIN LIU
TM6SF2 is expressed not only in liver poproteins that are then secreted, ANN K. DALY
but also in intestine where alkaline altered, and eventually taken up again CHRISTOPHER P. DAY
phosphatase is also present at high by the liver as VLDL remnants, how if QUENTIN M. ANSTEE
levels, the authors suggest that intes- at all this cycle is disrupted by the Newcastle University
tine may be where the E167K change E167K variant at TM6SF2 remains Newcastle-upon-Tyne, UK
may exert its effect to cause lower to be tested. Because chylomicron
ELIZABETH K. SPELIOTES
levels of alkaline phosphatase.20 This assembly and circulation in intestine
University of Michigan
theory remains to be tested. Another parallels VLDL assembly and circula-
Ann Arbor, Michigan
unresolved question relates to the role tion in liver and because TM6SF2 is
of TM6SF2 in the development of type also expressed in intestine, it remains
2 diabetes mellitus. Although one large to be determined whether chylomi-
meta-analysis suggests that TM6SF2 cron biology is also affected by the References
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clamp studies nding no reduction in can hopefully better tailor clinical Progression of NAFLD to diabetes
682
COMMENTARIES
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COMMENTARIES
William Leech Building, Framlington Place, and the University of Michigan Internal Medicine
Reprint requests Newcastle-upon-Tyne, NE2 4HH, UK. e-mail: Department, Division of Gastroenterology, and
Address requests for reprints to: Elizabeth K. quentin.anstee@newcastle.ac.uk Biological Sciences Scholars Program. Quentin
Speliotes, MD, PhD, MPH, Division of M. Anstee was supported by a Clinical Senior
Gastroenterology and Hepatology, University of Conicts of interest Lectureship Award from the Higher Education
Michigan Health System, 3912 Taubman Center, The authors disclose no conicts. Funding Council for England (HEFCE).
1500 E. Medical Center Drive, SPC 5362, Ann
Arbor, MI 48109-5362. e-mail: espeliot@med.
umich.edu; Quentin M. Anstee, BSc, MBBS, PhD, Funding 2015 by the AGA Institute
MRCP(UK), Institute of Cellular Medicine, The Bratati Kahali and Elizabeth K. Speliotes were 0016-5085/$36.00
Medical School, Newcastle University, 4th Floor, supported by the Doris Duke Medical Foundation, http://dx.doi.org/10.1053/j.gastro.2015.01.038
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