= THE, ———_—_ Coes A TAXONOMIC STUDY wr 7 3 VOLUME 1 Spey DENY C.P. KURTZMAN ° J.W. FELL * T. BOEKHOUTVolume 1 Preface xiii Contributors ~ Acknowledgments xix Use ofthis book xxi Part | Classification of Yeasts 1. Definition, Classification and Nomenclature of the Yeasts 3 GP, Kurtz, JW. Fell and 7. Boekliout Part II Importance of Yeasts 2, Yeasts Pathogenic to Humans 9 CR. Cooper, Jr. 3. Yeast Biotechnology 21 EA. Johnson and C. Echavarri-Erasun 4, Agriculturally Important Yeasts: Biological Control of Field and Postharvest Diseases Using Yeast Antagonists, and Yeasts as Pathogens of Plants 45 DA. Schisler, WJ. Janisiewicz, T. Boekhout and CP Kurtzman 5. Yeast Spoilage of Foods and Beverages 53 GH. Fleet 6. Yeast Ecology 65 WEI. Starmer and M.A. Lachance Part III Phenotypic, Ultrastructural, Biochemical and Molecular Properties Used for Yeast Classification 7. Methods for Isolation, Phenotypic Characterization and Maintenance of Yeasts 87 ‘CP. Kurtzman, J.W. Fell, T. Boekhout and V. Robert 8. Cytology, Cell Walls and Septa: A Summary of Yeast Cell Biology from a Phylogenetic Perspective m1 1. van der Kiei, M. Veerhuis,S. Brul, EM. Klis, P.WJ. De Groot, WH. Miller, K.G.A. van Driel and T. Boekhout 9. Chemotaxonomy of Yeasts 129 H. Prillinget, K. Lopandic, M. Suzuki, J.L.F Kock and T. Boekhout 10. Gene Sequence Analyses and other DNA-Based Methods for Yeast Species Recognition 137 CP. Kurtzman, J.W. Fell and T. Boekhout 11. Genome Sequences of Saccharomycotina: Resources and Applications in Phylogenomics 145 E. Rozpédowska, J. Piskur and KH. Wolfe 12. Molecular Phylogenetic Reconstruction 159 M. Wei and M. Goker Key to Species, Summary of Species Characteristics, Glossary, Indexes to Taxa, References Key to Species ws RW. Payne, CP Kurtzman, |W. Fell and T. Boekhout ‘Summary of Species Characteristics m3 C2 Kurtzman, J.W. Fell and I. Boekhout Glossary of Terms Used in This Book 279 RJ. Bandoni, M. Weiss, T. Boekhout, J.W. Fell and CP. Kurtzman Index to Taxa by Genus and Species it Index to Species and Varietal Names 23 References 1 C contents)Volume 2 Part IVa Classification of the Ascomycetous Taxa 13, Discussion of Teleomorphic and Anamorphic Ascomycetous Yeasts and Yeast-like Taxa CR Kurtzman Part IVb Descriptions of Teleomorphic Ascomycetous Genera and Species 14. Ambrosiozyma van der Walt (1972) M.Th. Smith 15. Ascobotryozyma J. Kerrigan, M.Th, Smith & J.D. Rogers (2001) J. Kerrigan and M.Th. Smith 16. Ascoidea Brefeld & Lindau (1891) G.S. de Hoog and M.Th. Smith 17. Babjeviella Kurtzman & M. Suzuki (2010) C2 Kurteman| 18. Barnettozyma Kurtzman, Robnett & Basehoar-Powers (2008) CP Kurtzman 19, Cephaloascus Hanawa (1920) C2 Kurtzman and GS. de Hoog 20. Citeromyces Santa Maria (1957) CP Kurtzman 21. Clavispora Rodrigues de Miranda (1979) M.A. Lachance 22. Coccidiascus Chatton emend. Lushbaugh, Rowton & McGhee (1976) HJ. Phat 23. Cyniclomyces van der Walt & D.B. Scott (1971) K. Boundy-Mills and M.W. Miller 24. Debaryomyces Lodder & Kreger-van Rij (1952) M. Suzuki, G.S, Prasad and C.P. Kurtzman 293 319 325 329 333 341 345 349 357 361 25. 27. 28. 30. a1, 32. 33. 34, BS. 36. 37. 38. Dekkera van der Walt (1964) M.Th. Smith . Dipodascopsis Batra & P. Millner ‘mend. Kurtzman, Albertyn & Basehoar-Powers (2007) M.Th. Smith and G.S. de Hoog Dipodascus de Lagerheim (1892) GS. de Hoog and M.Th. Smith Endomyces Ress (1870) GS. de Hoog and M.Th. Smith onium W.L. White (1942) and Phialoascus Redhead & Malloch (1977) D. Malloch Eremothecium Borzi emend. Kurtzman (1995) CP. Kurtzman and G.S. de Hoog Galactomyces Redhead & Malloch (1977) GS. de Hoog and M.Th. Smith Hanseniaspora Zikes (1912) N. Cadez and M.Th. Smith Hyphopichia von Arx & van der ‘Walt (1976) CP. Kurtzman Kazachstania Zubkova (1971) ‘A. Vaughan-Martini, MA. Lachance and CP. Kurtzman Kluyveromyces van der Walt (1971) M.A. Lachance Kodamaea Y. Yamada, T. Suzuki, Matsuda & Mikata emend. Rosa, Lachance, Starmer, Barker, Bowles & Schlag-Edler (1999) ‘M.A. Lachance and C.P. Kurtzman Komagataella Y. Yamada, Matsuda, Maeda & Mikata (1995) CP. Kurtzman Kregervanrija Kurtzman (2006) CP. Kurtzman Contents 373 379 385 393 397 405 413 421 435 439 471 483 491 497