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Protein & Peptide Letters, 2014, 21, 0000-0000 1
Department of Chemistry, Presidency University, 86/1 College Street, Kolkata 700 073, India
Abstract: The unfolding of dimeric Erythrina cristagalli lectin (ECL) has been investigated and compared under different
denaturing conditions in presence of chemical denaturant, guanidine hydrochloride (GdnHCl) and fluoroalcohols,
trifluoroethanol (TFE) and hexafluoroisopropanol (HFIP). The GdnHCl-induced unfolding exhibits three-state mechanism
involving structured intermediate that corresponds to tertiary monomer. The intermediate has been characterized by 8-
anilino-1-naphthalenesulfonate (ANS) binding, which shows ~ 30 fold increase in ANS fluorescence and selective chemi-
cal modification with N-bromosuccinimide when Trp 45 and Trp 207 are possibly oxidized. The results are supported by
red edge excitation shift (10 nm), acrylamide quenching and phosphorescence studies which give a (0,0) band at 412.6
nm. TFE and HFIP show differing roles and characteristics of ECL unfolding. In TFE, but not in HFIP, a molten globule-
like monomeric intermediate is formed, being characterized by ANS binding and concentration dependent studies. TFE-
and HFIP-induced secondary structure changes of ECL, as monitored by far-UV CD, show that conversion of -sheet to
-helix occurs at lower HFIP concentration compared to TFE perturbation, helical content reaching to 65 % in 80 % HFIP
and 53 % in 90 % TFE. Temperature-dependent studies reveal that induced helix entails reduced thermal stability. FTIR
results show partial -sheet to -helix conversion but with quantitative yield. The tryptophan environment of TFE- and
HFIP-induced states is dissimilar involving oxidation of four and three tryptophans respectively, and also differs from the
fully unfolded state in GdnHCl when all five tryptophans undergo oxidation. The results offer insights into the unfolding
problem of ECL.
Keywords: Chaotrope, conformational change, Erythrina cristagalli lectin, fluoroalcohol, oligomeric protein, unfolding.
INTRODUCTION families, legume lectins have attracted much interest for pro-
tein folding studies because they exhibit the same tertiary
The unfolding of a protein can be induced by solvent
structural fold but differ considerably in their quaternary
denaturation using chaotropic agent such as guanidine hy-
structures [11,12]. Erythrina cristagalli lectin (ECL) is a
drochloride (GdnHCl) or fluoroalcohols like 2,2,2-trifluoro-
galactose-specific legume lectin, and exists as a dimer. X-ray
ethanol (TFE) and 1,1,1,3,3,3-hexafluoroisopropanol (HFIP).
structure of ECL [13] shows that the ECL fold consists of
A major difficulty in experimental investigations of protein two stacked antiparallel -sheets (Fig. 1A), as seen for other
unfolding reaction is the reliable identification and structural
legume lectins. However, unlike canonical dimeric structure
description of the intermediate state(s), which would reveal
for several legume lectins, for example, concanavalin A [11],
the unfolding sequence. GdnHCl-induced denaturation may
ECL forms non-canonical dimer in which two monomers are
involve folded or partially folded intermediates with native-
arranged back-to-back in “handshake” fashion (Fig. 1B). The
like secondary structure [1-4] whereas fluoroalcohols lead to
dimer interface is characterized by mostly hydrophobic in-
structural states with nonnative secondary conformations [5- teractions between the two monomers.
8]. It has been proposed that fluoroalcohols destabilizes the
hydrophobic cores of protein because of its nonpolar charac- Solvent denaturation studies of many legume lectins have
ter while it induces helix formation by minimizing exposure been shown to be either a simple two-state process or a
of peptide backbone [9]. In comparison to monomeric pro- multi-state process involving structured or partially folded
teins, the unfolding problem of oligomeric proteins is more intermediates [14-18]. We have earlier shown the distin-
complex as it requires the disruption of additional molecular guishing features of soybean agglutinin and concanavalin A
interactions since both inter- and intrasubunit interactions in different structural states in their unfolding pathways
contribute to their overall structure and stability. [19,20]. Recently, we have demonstrated a unique molten
globule fragment chain of pea lectin in GdnHCl-induced
An important class of oligomeric proteins comprises lect-
unfolding [21] and presented the differential structural char-
ins that bind carbohydrate selectively, and are involved in
acteristics of the molten globule intermediate formed in the
various biological recognition processes [10]. Among lectin unfolding reaction of peanut agglutinin in urea and GdnHCl
[22]. Very recently, we have examined the effects of TFE on
*Address correspondence to this author at the Department of Chemistry, the perturbation of secondary structure of soybean agglutinin
Presidency University, Kolkata, India; Tel: +91 33 2241 3893; for quaternary and tertiary forms of the lectin [23]. Here, we
E-mails: dm_pcchem@yahoo.co.in; dm.pcchem@gmail.com
or with GdnHCl or TFE at 77 K in a Dewar system using a denaturation curve in terms of the relative decrease of
quartz tube (o.d. 5 mm). Samples prepared in 40% ethylene fluorescence intensity at 320 nm as a function of GdnHCl
glycol in appropriate buffer were frozen in liquid nitrogen. concentration. As shown, two distinct transitions have been
Excitation wavelength was set at 280 nm. Excitation and observed involving an intermediate around 1.5 M GdnHCl.
emission band pass was 10 nm and 1.0 nm respectively. The Free ANS is feebly fluorescent in aqueous solution, but
phosphorescence spectra were free from any polarization
its spectrum is blue shifted (520470 nm) with large
artifacts and found to be reproducible.
increase of intensity when it binds to hydrophobic surfaces
CD measurement. CD measurements were performed in of proteins. Usually the hydrophobic core of native proteins
far-UV region (190-260 nm) on J-815 spectropolarimeter is well protected from the solvent by the rigid packing of
(Jasco, Japan) which was equipped with a temperature con- tertiary structure. Thus ANS has a low affinity for the native
troller (Peltier type). ECL samples were prepared in PBS, pH as well as fully denatured state [29,30]. However, the ability
7.2 containing requisite quantities of GdnHCl or TFE / of ANS to bind to intermediate state with hydrophobic
HFIP. All the spectra were recorded in a cell of 1 mm path exposure provides a suitable method for the detection of
length. The scan speed was 50 nm / min and response time intermediate in protein unfolding reaction. Fig. 2B shows the
was 2 s. To eliminate signal noise, the spectra were averaged ANS fluorescent spectra of ECL in 0M, 1.6 M and 6 M
over at least five scans. GdnHCl along with a plot of ANS fluorescence intensity at
470 nm as a function of GdnHCl concentration (inset). The
FTIR measurement. FTIR spectra were obtained on a
fluorescence intensity at 470 nm for the ANS-ECL dimer
FT/IR-680 plus spectrometer (Jasco, Japan) at 4 cm-1 resolu-
complex is small, but a large increase (~30 fold) in ANS
tion. The spectra were averaged over 512 scans. The sample
fluorescence intensity occurs for the species populated in 1.6
for native ECL was prepared by dissolving the protein in
M GdnHCl. The ANS fluorescence for ECL in 3 M
D2O containing 0.15 M NaCl which was kept for 15 min.
The native ECL sample was placed in a sealed cell GdnHCl is negligible. The results clearly suggest and pro-
vide further evidence for the existence of an intermediate in
consisting of two ZnSe windows and a Teflon spacer with
the unfolding of ECL. Since ECL is a noncovalently
path length of 100 μm. In presence of TFE, the experiments
associated dimer, one possibility is that the intermediate
were carried out in a similar fashion when requisite amounts
detected through ANS binding is a dissociated monomer
of TFE-OD were added to ECL solution. In all cases appro-
with exposure of hydrophobic surface. The size-exclusion
priate blanks were subtracted and spectra in the range of
1700-1600 cm-1 were examined. chromatography on Superose-12 10/300 GL column of ECL
in 1.6 M GdnHCl gave a single peak which eluted later than
Chemical modification. Tryptophan oxidation with NBS native ECL (Fig. 3). From the molecular weight calibration
[28] was carried out at room temperature with native ECL curve, the protein peak in 1.6 M GdnHCl was found to ap-
and other ECL samples in GdnHCl or TFE / HFIP. Aliquots pear at a position of molecular mass of 28 kDa that corre-
of NBS (2 M) were added to ECL samples in 20 mM sodium sponds to the lectin monomer. The result is also corroborated
acetate buffer, pH 5 containing 0.15 M NaCl taken in a 1-cm by theoretical calculation from the x-ray structure of ECL
path length cuvette and kept for 5 min. The protein concen- [13]. The monomer-monomer interface area has been deter-
tration was 500 μg / mL. The progress of reaction was moni- mined using the program ProFace [31]. Upon dissociation,
tored by increase in absorbance at 250 nm due to formation there occurs an exposure of 762 Å2 surface area per subunit,
of oxindolealanine and decrease in absorbance at 280 nm due of which 530 Å2 corresponds to hydrophobic patches which
to tryptophan modification. The absorbance recorded at 280 bind to ANS causing a blue shift of its emission maximum
nm was corrected for dilution. The number of tryptophans with dramatic enhancement of fluorescence intensity.
modified was estimated according to Spande and Witkop
Far-UV CD studies. Far-UV CD senses secondary struc-
[28].
ture of a protein, and is commonly used to monitor the melt-
ing of secondary structure during protein unfolding. The
RESULTS AND DISCUSSION secondary structure of ECL is predominantly -sheet (Fig.
Native ECL exists as a dimer. The unfolding of ECL with 1). The far-UV CD spectra of ECL in 0 M, 1.6 M and 6 M
concomitant structural changes, as induced by the chemical GdnHCl is shown in (Fig. 4). Native ECL shows a character-
denaturant (GdnHCl), and by fluoroalcohols (TFE and HFIP) istic negative maximum around 225 nm for an atypical -
have been investigated using fluorescence, low temperature sheet structure. This -sheet band shape has been found to be
phosphorescence, selective chemical modification, far-UV retained in the intermediate monomer in 1.6 M GdnHCl ex-
CD and FTIR. hibiting the characteristics of a folded species. However, for
the unfolded species in 6 M GdnHCl, the secondary -
GdnHCl-induced Unfolding of ECL: Detection and structure has been completely lost.
Characterization of an Intermediate Chemical modification of tryptophan residues with N-
Intrinsic fluorescence and ANS binding studies. Na- bromosuccinimide (NBS). Tryptophan environment in
tive ECL exhibits an emission maximum at 328±1 nm, proteins can be probed by selective oxidation with NBS. The
which undergoes gradual red-shift with increase in GdnHCl oxidation reaction converts the indole side chain of
concentration, and ultimately levels off at 351±1 nm in 3 M tryptophan to oxindole, and thus causes a loss of absorbance
GdnHCl indicating Trp exposure to aqueous environment at 280 nm [28]. ECL has five tryptophan residues per
and complete unfolding of the protein. Fig. 2A shows the subunit. Table 1 shows that two tryptophans are oxidized for
4 Protein & Peptide Letters, 2014, Vol. 21, No. 1 Sen and Mandal
Table 1. Accessible Surface Area (ASA) of Tryptophan Residues and Number of Tryptophans Modified by NBS in Different
States of ECL
Trp 45 Trp 60 Trp 135 Trp 207 Trp 231
ECL Monomer (Intermediate in 1.6 M GdnHCl) 78.27 36.31 43.99 109.05 1.89 2
presumably buried, and are thus inaccessible to NBS. In the environment for these species in which the immediate
unfolded state, all tryptophans, however, become fully ex- vicinity of at least some of the tryptophans is highly rigid.
posed to the solvent, and are therefore oxidized. This is in excellent agreement with chemical modification
studies described before. No REES is observed for the
Red edge excitation shift (REES) studies. REES refers
unfolded ECL due to the high flexibility of the tryptophan
to a shift in fluorescence emission maximum towards higher
residues, when all of them become solvent-exposed.
wavelength on changing the excitation wavelength towards
the red edge of the absorption band. The red edge effects for Acrylamide quenching studies. Acrylamide quenching
tryptophans in proteins have been attributed mainly to the of tryptophan fluorescence is a convenient method to exam-
slow rates of solvent relaxation around the excited state ine tryptophan environments in proteins [35]. Table 2 shows
tryptophan(s) due to motional restriction imposed on the the quenching parameters obtained by analyzing the Stern-
surrounding solvent molecules [33,34]. REES thus offers to Volmer plots. The Stern-Volmer constant (KSV) is related to
probe the tryptophan environment in different structural the degree of exposure (accessibility) of the tryptophans. The
states in protein unfolding reaction. Fig. 5 shows the REES KSV for native ECL is found to be 2.1 M-1, which is similar
plot for ECL dimer, monomer, and denatured ECL. As the to that for the intermediate monomer in 1.6 M GdnHCl.
excitation wavelength is changed from 280 to 300 nm, the These results indicate the very similar tryptophan environ-
emission maximum of ECL dimer is shifted from 329 to 339 ment in them. However, the value of KSV for the unfolded
nm, which corresponds to a REES of 10 nm. Similar REES form in 6 M GdnHCl is 14.4 M-1 indicating a large increase
effect is observed for ECL monomer. The unfolded ECL, in solvent exposure of tryptophan residues. These results
however, exhibits no excitation wavelength dependence. agree well with the findings from NBS oxidation.
ECL is a multitryptophan protein containing five tryptophan Table 2. Acrylamide Quenching of Tryptophan Fluorescence of
residues per monomer. REES effect may therefore be ECL
attributed to the average environment experienced by the
tryptophans. The observation of similar REES effect for ECL
dimer and monomer implies similar average tryptophan System KSV (M-1)
Figure 10. Far-UV CD spectra of ECL in presence of A) 0 % (1), 20 % (2), 30 % (3), 40 % (4), 50 % (5), 60 % (6),70 %(7), 80 % (8), 90 %
(9) TFE at 20 oC; B) 0 %, 5 %, 20 %, 30 %, 40 %, 50 % and 80 % HFIP at 20 oC; C) 90 % TFE at different temperatures (5-70 oC). ECL and
TFE were mixed after equilibration of each at the desired temperature. Protein concentration was 0.28 mg / mL in all cases. Respective
buffer spectra were subtracted in each case and at least five scans were carried out.
NBS in the native ECL while all five are susceptible to oxi-
dation in the completely unfolded state in 6 M GdnHCl. In
the HFIP-induced helix in 70 % HFIP, three tryptophans are
oxidized while for TFE-induced -helical state in 90 % TFE,
four tryptophans undergo oxidation. These results are sup-
ported by phosphorescence measurements, which show pro-
gressively blue-shifted (0,0) band at 411 nm and 409.8 nm in
70 % HFIP and 90 % TFE, respectively, indicating more
exposure of tryptophan residues. In the TFE-induced mono-
meric intermediate in ~25 % TFE, NBS oxidation could not
be performed because of precipitation; however, phospho-
rescence result under this condition gives a (0,0) band at
409.8 nm as obtained in 90 % TFE. Further, the fluorescence
emission maximum in the range of 25-90 % TFE, remains
practically same at 341 nm. These results seem to indicate
that the tryptophan environment in the TFE-induced inter-
mediate is similar to that in -helical form. This implies that
Figure 11. FTIR amide I' spectra of ECL in presence of 0 % (a) and
in TFE, transformation of the -sheet intermediate state into
90 % (b) TFE-OD. Protein concentration was 3 mg / mL. Spectra -helical conformation does not induce change in tryptophan
were recorded at 4 cm-1 resolution as an average of 512 scans. environment.
Respective buffer spectra were subtracted in each case.
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Received: June 28, 2013 Revised: August 10, 2013 Accepted: August 10, 2013