Professional Documents
Culture Documents
Sectioning : cutting tissue uniformly into a thin slice/section with the aid of a Belgium yellow/ hone ▪ for manual sharpening
machine to facilitate the studies under the microscope. ▪ usually gives best result
Microtome : a machine/instrument designed for actual cutting of thin section. Arkansas ▪ gives more polishing effect
Fine carborundum ▪ much coarser
KINDS OF MICROTOME
▪ used for badly nicked knives
Sliding Base-sledge type
(celloidin- - 2 movable pillars holding the knife Plate glass hone ▪ use diamanthine for final polishing
embedded - chuck/block holder is set on a heavy metal base Machine hone ▪ glass disc or wheel driven by electric motor
section) - block holder is raised towards the knife
Std. sliding type COMMON LUBRICANT USED FOR HONING
- The block remains stationary - mineral oil
- the knife is moved backward and forward during sectioning - clove oil
Rotary - For paraffin-embedded sections - xylene
- most common type used for routine & research laboratories - liquid paraffin
Freezing - For unembedded tissue - soapy water
- a simple lever operated valve release a rapid, intermittent burst
of CO2 to freeze the block holder CARE AND USE OF MICRTOME KNIVES
▪ For rapid Dx ▪ perfect edge: junction of the smooth plane surface 14°
▪ For histological demo of fat ▪ use fine yellow Belgian water stone to remove large nicks
▪ For the study of neurological structure ▪ size 8’’ x 3’’
▪ For the study of sensitive tissue constituent which are ▪ keep the knife flat when being honed
damaged/ destroyed by heat ▪ finish the edge on a leather or linen strop
Rocking - For serial sections of large blocks of paraffin-embedded tissue ▪ wipe the knife clean with soft cloth before and after stropping strokes
- produce 60-90sections with ease ▪ use gentle pressure when stropping
▪ Lower arm : resting on pivots and supporting column ▪ avoid speed in stropping
▪ Upper arm : carry the block holder on one end by a screw ▪ leather strop require oiling before use. Use castor oil or vege oil to treat the
Ultra thin - For electron microscopy strop applied at the back of the strop (not on the surface)
sectioning ▪ mineral oil destroys the leather strop, done allow to come in contact with the
microtome strop
▪ wax shouldn’t come in contact with the strop
MAJOR PARTS OF A MICROTOME
Block Holder/ chuck Holds the tissue block in place TYPES OF TISSUE SECTIONING
Knife carrier and knife Actual cutting of tissues PARAFFIN SECTIONS
Pawl, ratchet feed Line up the tissue in proper position to the knife, ▪ Prep: trim the block until all sides are parallel
wheel, adjs.screw Adjust proper thickness of the tissue for successive
▪ Adhesive: for entailing significant exposure of section to acids and alkalis, but
sections
cannot be used for protein histochemical investigation
Mayer’s albumin Egg white + glycerin + thymol crystal
CARE OF THE ROTARY MICROTOME
▪ after cutting, brush away with soft brush: all accumulated paraffin and tissue Dried albumin Dried albumin + NaCl + thymol crystal
Gelatin Gelatin + water + glycerol +phenol crystal
▪ wipe clean all metal parts with xylol
Gelatin chrome Can be added to water bath.
▪ avoid continuous application of xylol to the rest of the machine (can remove
alum
the painted finish)
Starch paste Powdered starch + HCl + thymol crystal
▪ Dry the machine carefully especially the knife holder Plasma Outdated blood stored in blood banks
▪ keep the machine well oiled to prevent rust formation
▪ Actual Sectioning
▪ keep the moving parts of microtome oiled -nervous tissue, lymph nodes : slow, gentle motion
▪ cover the microtome when not in use (prevent accumulation of dust and dirt) -the harder the tissue, the harder & cooler the block should be
(may interfere the sectioning) ▪ Floating out bath
45-50C or 6-10C lower than the melting point of paraffin
MICROTOME KNIVES ▪ Drying of sections
PARTS OF MICROTOME KNIFE -wax oven 56-60C (2hours)
Cutting edge Cutting facet, made of good quality steel. -incubator 37C (overnight)
Able to cut good section from a paraffin wax block without -hot plate 45-55C (30-45 min)
any serration note on examination. -blower type electric slide dryer 50-55C (20-30min)
Wedge -bunsen flame until the wax melts
Knife back Spring-loaded semicircular sheet of metal slipped on the knife -nervous tissue: incubation overnight 37C
Bevel angle Angle between the cutting edge: 27-32
Wedge angle Angle formed by the sides of the wedge knife (5-14) DIFFICULTIES ENCOUTERED IN SECTION CUTTING
Clearance angle Angle between cutting facet (5-15) FAULTS REASON REMEDY
▪ prolonged fixation Soften tissue by soaking oil in a
KINDS OF MICROTOME KNIVES ▪ prolonged dehydration smaller dish or bowl (w/water)
with detergent, phenol or
Plane concave 250mm, 1 side is flat, 1 side is concave ▪ prolonged clearing
molliflex
Biconcave 120mm, both sides concave Brittle/hard tissue ▪ prolonged paraffin
Plane wedge 100mm, both sides straight infiltration in over heated
paraffin oven
CARE OF MICROTOME KNIFE ▪ drying out of tissue before
fixation
Honing ▪ removal of gross nicks on the knife edge (coarse hoaning)
Clearing becomes ▪ water not removed Repeat dehydration with
▪ removal of blemishes and irregularities from knife edge milky as soon as tissue completely (incomplete absolute alcohol, then clear
▪ Direction: heel to toe is placed in it dehydration) again
Stropping ▪ for sharpening ▪ incomplete removal of ▪Trim the blocks down nearest
On trimming, tissue clearing agent due to to the tissue
▪ removal of burr or irregularities during honing
smells of clearing insufficient impregnation ▪Melt the remaining wax on
▪ final polishing of the knife edge agent embedding oven
▪ Direction: toe to heel (reverse of honing) ▪Repeat paraffin impregnation
Tissue is opaque ▪ insufficient clearing Repeat clearing
STROPPING section cutting is
Hone: a natural stone or hard grinding surface for sharpening a knife difficult due to
presence of alcohol
Tissue shrinks away ▪ insufficient dehydration Repeat whole procedure
from the wax when
trimmed ▪ tilt of knife is insufficient, ▪ increase the tilt
Tissue is soft when ▪ incomplete fixation Repeat fixation Resistance is felt on paraffin block is therefore
block is trimmed the lower part of compressed against the base
▪ incomplete impregnation Reembed in freshly filtered section during cutting of knife towards the end of
Airholes found on
▪ contaminated wax wax the stroke
tissue during trimming
▪ block not cooled rapid Horizontal or parallel ▪knife edge vibrates due to: ▪ treat with phenol during
(appear crystalline) lines or forrows across
enough a) hardness of the tissue processing or collodionize
the sections/chatters b) tilt of the knife is too great
Moist & crumbled ▪ insufficient paraffin Repeat paraffin impregnation,
are seen, forming thin
Paraffin block after impregnation reembed
and thick zones
cooling
▪ surfaces and edges of block ▪Retrim the block ▪ knife is blunt ▪ tighten adjusting and locking
are not parallel ▪ knife isn’t clamped properly screws
▪ tilt of knife is too great ▪ increase tilt
▪ horizontal surface of the ▪Re adjust and reorient the Section cut is
block is not parallel to the block sometimes thin, ▪ knife or blockholder is loose
knife sometimes thick ▪ knife tilt is too small that
Sections fail to form
▪ paraffin wax is too hard ▪Coat horizontal edge of block block is compressed by bevel
ribbons
with wax of lower MP and section isn’t cut
▪ knife is tilted too much ▪Reduce the tilt of knife Knife makes a hard ▪ tilt of knife is too slant or ▪ readjust the angulation of
▪Readjust the thickness metallic scraping or too big the knife
▪ sections are too thick ringing sound on ▪ tissue is too hard ▪ take fresh block
▪ knife is dull backstroke, when
▪ knife blade is too thin ▪ change the knife
sectioning
Sections roll up on ▪ knife is dull Sharpen the knife
Frozen tissue crumbles ▪ freezing isn’t adequate Refreeze the tissue
cutting so that they ▪ knife is tilted too much Reduce the tilt
and comes off the
adhere and get broken Clean the knife edge
▪ knife edge is dirty blockholder when cut
and against the knife
edge Frozen tissue chips ▪ tissue is frozen too hard ▪ warm the tissue with fingers
into fragments when
▪ blunt or dull spot on knife ▪Adjust the knife so that knife
cut
(irregular knife edge) edge will present formly sharp
edge to the block or sharpen
▪Retrim the block DIFFICULTIES DERIVED FROM THE TISSUES
Ribbon is curved, ▪Readjust the knife and the blood clot, very hard in routine block before cutting, effect with a firm sharp
crooked or uneven ▪ edges of the block are not block cervix, thyroid processing stroke. Use chloroform as clearing agent. Use
tetrahydrofuran for dehydrating agent.
instead of straight parallel but round or wedge- ▪Repeat impregnation using tissue
shaped pure wax fatty tissues soft blocks and shredded Cut thin 2mm, and impregnate with wax in
▪ knife is not parallel to the (subcutaneous tissue vacuum bath
block
tissue, breast,
▪ paraffin is impure
lipoma)
▪knife is blunt or dull ▪Resharpen the knife
brain and very hard and brittle (if Use chloroform and vacuum impregnation
▪ paraffin block is warm and ▪Cool the block on ice water using xylol for with lymph nodes
lymph nodes
soft until firm dealcoholization)
Sections are ▪ knife edge is coated with ▪Clean the knife edge soft tissue Tend to expand more set and cool the wax block 10-12%shrinkage..
compressed, wrinkled paraffin when floated out Split the outer rim of wax with a dissecting
or jammed ▪ sections are too thin ▪Readjust the thickness of needle.
▪ microtome set screw is section
loose ▪Thighten the screw CELLOIDIN SECTIONS 徐智慧/
▪ tilt of knife is too vertical ▪Reduce the tilt
▪ 10-15u in thickness
▪incomplete dehydration, ▪remove paraffin with clearing
clearing and infiltration of agent, pass thru decreasing ▪ don’t require hardening by chilling before cutting
tissue with wax grade of alcohol, then repeat ▪ use sliding microtome
Sections are torn and ▪ paraffin is warm and soft dehydration, clearing and ▪ use wet method to avoid dehydration and shrinkage
crumble when cut ▪ knife is blunt embedding
▪ cool and harden paraffin in
FROZEN SECTIONS
ice water for ¼ to ½ hour.
2 METHODS OF PREPARATION
▪ sharpen the knife
Cold ▪ knife ▪ CO2 (Freezing ▪ filter paper soaked in gum
Sections are squashed ▪ Bevel of knife is lost due to ▪ resharpen, using a knife back
knife -40 to -60C agent) syrup on microtome stage
width of each section incorrect sharpening or automatic knife sharpener
less than that of the ▪ tissue ▪ different temp ▪ apply short burst of CO2
block -5 to -10C between knife ▪ 3-5mm thick
▪ bubble or dirt formed in the ▪ reembed in freshly filtered ▪ environment and tissue (latter ▪ 5 sec interval
0 to -10C is colder) ▪ dew line: the point at which
embedding medium wax if necessary
A Hole is formed in ▪ hard spot in tissue possibly ▪ once embedded in paraffin sections may be cut at 10 u.
the section due to calcium wax, decalcification is Cryostat Near -20 C Advantages: Disadvantage:
impractical use a base sledge ▪ (-5 to -15C) ▪ staining (fat ▪ sections don’t form ribbons
microtome with a wedge knife brain, lymph nodes, demo by oil red but stick to the knife blade
▪ tilt of knife is too great or ▪ reduce the tilt liver, spleen, kidney, O, silver (remove with camel’s hair
bevel is not cleared, hence testis, uterine, impregnation, brush)
object is compressed against tumor, thyroid CNS methods) ▪ lack of embedding mass,
the knife edge ▪ (-15 to -20C) ▪ indispensable distorted structural details
Sections of unequal
▪ clamp set screw on the knife ▪ tighten screw Muscle, conn tissue, for rapid during cutting
thickness are
or blockholder is loose pancreas, uterus, diagnosis during ▪ staining of unfixed tissue is
produced cervix, skin without operation
▪ blocks are too large ▪ cut blocks into smaller rarely unsatisfactory
fragments fat, nonfatty breast ▪ enzyme demo ▪ produce freezing artifact
tissue, ovary,
▪ blocks are too hard ▪ soften blocks in detergent or
prostate, tongue, gut
phenol
▪ (-35C)
▪ static electricity due to low Breathe out or blow gently on
Fatty tissue, fatty
Sections adhere to the atmospheric humidity the block and knife to break up
breast, omental
knife or other parts of ▪ knife edge is dirty static electricity or boil in water
in room to increase the
the machine ▪ knife edge is dull
humidity
▪ knife tilt is too great
▪ nicks/damage on the knife ▪ sharpen the knife
Ribbon is split or edge
lengthwise vertical
▪ dirty embedding medium ▪ reembed in filetered wax
scratches are seen on
section ▪ knife edge is dirty ▪ clean the knife edge with
▪ tilt of the knife is too great xylol
▪ knife tilt is too great ▪ cool paraffin wax in ice water
Sections are lifted
▪ knife is dull
from the knife on
upstrokes ▪ paraffin is too soft r RT is
warm
STAINING 徐智慧/ COMPOSITION OF DYES
Formation of colors of different tissues and cells Alum Hematoxylin a) Ehrlich’s hematoxylin
-LEEUWENHOEK (saffron) ▪ For progressive ▪ Regressive staining
-GOPPERT, COHN (carmine) staining ▪ for muco
▪ Counterstained with polysaccharide, cartilage,
-GERLACH (sel. Nuclear stain) Hematoxylin
congo red & safranin. cement lines of bones
▪ Low affinity for b) Harris Hematoxylin
PURPOSES OF STAINING ▪ Salt lakes color: Blue
tissue, must use ▪ for routine nuclear staining
▪ Blueing: process of
▪ render different tissue constituents (more visible) mordants (alum, ▪ for exfoliative cytology
passing the tissue to
▪ easier optical differentiation for ID of cells and tissue iron, chromium,
alkaline solution to ▪ for staining sex
copper salts)
▪ display various affinities neutralize acid. chromosomes
▪ Extraction from
▪ display physical char and structural relationships heartwood of ▪ Cold water (slows c) Cole’s hematoxylin
down) ▪ for routine purposes
Mexican Tree:
Hematoxylin ▪ warm water ▪ used in sequence with
METHODS TO OBTAIN STAINING REACTION:
(accelerates) Celestine blue
▪ Capillary osmosis campechianum
▪ Hematin ▪ Very cold water d) Mayer’s hematoxylin
▪ Solubility Active coloring (<10C, produce pink ▪ used in Celestine blue
▪ Adsorption agent, oxidized artifacts) ▪ for nuclear staining
▪ Absorption hematoxylin a) Weigert’s hematoxylin
▪ Ripening ▪ std. for lab
TYPES OR METHODS OF STAINING Oxidation process of ▪ muscle fiber demo
hematoxylin to ▪ conn.tissue demo
Direct Use simple aqueous or alcoholic solution of the dye hematin.
Indirect ▪Mordant (link/bridge to form color) (exposure of stain to
b) Heidenhain’s hematoxylin
▪ cytological stain
▪Accentuator (accelerate/hasten the speed of staining) air and sunlight)
Iron Hematoxylin
OXA: ▪ for regressive staining of
Progressive Not washed or decolorized ▪ Mordants: ferric thin sections
-H2O2
▪ less favorable than regressive. Difficultly of producing -HgCl2 ammonium sulfide ▪ for nuclear and cytoplasmic
intense cell structure, diffused and obscured effect (iron alum) inclusion (chromatin,
-KMnO4
NATURAL
excess stain is decolorized
c) Phospho tungstic acid
▪differentiation/decolorization: selective removal of excess hematoxylin (PTAH)
stain from tissue ▪ for structures in paraffin,
Counterstaining Apply different color/stain to provide contrast and celloidin, frozen section
background. Cochineal Dyes
CYTOPLASMIC ▪ old histologic dye
▪RED ▪Yellow ▪Green ▪ from extraction of
-Eosin Y,B -Picric acid -Light green SF female cochineal bug
-Phloxine B -Orange G -Lissamine green (coccus cacti)
-Rose Bengal ▪ treated with alum
NUCLEAR to produce carmine
dye
▪RED ▪Blue
▪ combination with
-Neutral red -Methylene blue picric acid/
-Safranin red -Toluidine blue picrocarmine is used
-carmine -celestine blue for
-hematoxylin neutropathological
Metachromatic Use specific dye (metachromasia) study
Thiazine and triphenylmethane group ▪ combination with
-methyl violet/crystal violet AlCl3/ best’s carmine
is used for glycogen
-cresyl blue
demo
-safranin
Orcein Dye
-bismarck brown
▪ vege dyes from
-basic fuchsin
lichens
-methylene blue ▪ colorless
-thionine ▪ combination with
-toluidine blue ammonia and
-Azure A,B,C exposure to air
Microanatomical Demostrante general relationship of tissue and cell without produce blue and
emphasizing the inclusion bodies violet
▪Cytoplasmic staining
-doesn’t differentiate tissue structure in general ▪ Chromophores Dyes:
(from C6H6 hydrocarbon benzene)
Synthetic dyes/ coal tar dyes /Aniline dyes
SEALING
RINGING process of sealing the margins of coverslip to prevent escape of fluid.
Ringing media:
-paraffin wax -kronig’s/Dunoyer’s mixture
-nail polish -Durofix (cellulose adhesive)
BROKEN SLIDES
-unfragmented slide, unimportant section may be reassembled
-vital part section, unavailable replacement transfer to another slide
DECALCIFICATION 徐智慧/
Process of removing calcium salts or lime salts and its deposits from hard WAYS TO DETERMINE THE EXTENET OF DECALCIFICATION
tissue for softening of tissue to facilitate embedding and sectioning. Physical/mechanical test ▪Touching/bending tissue with fingers
FIXATION DECALCIFICATION IMPREGNATION ▪determine consistency
X-RAY or radiological method ▪can detect smallest focus of Ca
**Inadequate decalcification = poor cutting of hard tissue, damage to knife edge ▪ very expensive
Chemical method ▪ simple, reliable, convenient
Tissues for decalcification:
-bones CLOUDY:
-teeth -Incomplete
-atheromatous aorta -presence of Ca
-calcified tuberculous foi NOT CLOUDY:
-complete
BEFORE CALCIFICATION -no more Ca
▪ cut tissue into small pieces 5 mm = permit complete penetration ,
▪ adequate fixation
▪ place tissue in buffered neutral formalin for 2-4 days or helly’s fluid 15-24hr
DECALCIFYING AGENTS
Acid ▪ most widely The rate is affected Nitric acid
used by: HCl
▪ stable ▪ tissue structure Formic acid
▪ easily available ▪ temp Trichloroacetic
▪ volume and conc. acid
▪ relatively
Sulfurous acid
inexpensive Of solution
Chromic acid
▪ external factor
Citric acid
(accelerate)
Chelating Combines Ca2+ to Advantage: ▪ EDTA/
agents form soluble non -forms min. Versene
ionized complex, histological artifacts
facilitate removal Disadvantage:
of calcium. -slow reacting
Ion exchange Ammonium form Advantages:
resin of plystyrene resin Cellular detail is well
▪ remove calcium preserved
ions from formic
acid , increase
solubility
Electrical ▪ Ca2+ are Advantage:
ioinization/ attracted to ▪Faster due to heat
electrophoresis negative electrode, and electrolyte
then removed reaction
from decalcifying ▪ recommended for
solution. small bone
fragments
Disadvantage:
Not well preserved
NITRIC ACID: most common, very rapid, min. distortion, inhibits nuclear staining,
destroy tissue
Aquous nitric acid
12-24 hr ▪ rapid ▪ prolonged may
solution 10%
Formol nitric acid 1-3 days ▪ for urgent biopsy distort tissue
Perenyi’s fluid 2-7 days ▪ no maceration ▪ slow
Phloroglucin nitric ▪ poor nuclear
12-24 hr ▪ most rapid
acid staining
HCl : slow, great distortion, good nuclear staining
FORMIC ACID: Moderate, beter nuclear staining, for postmortem studies. ▪
fixative + decalcifying agent in one ▪ slow
Formic acid 3-14 ▪ excellent nuclear ▪ slow
sodium citrate days staining ▪ not routine
TRICHLOROACETIC ACID : 4-8 days, good nuclear staining, weak, not for dense
tissue
SULFUROUS ACID: very weak, only for min. bones
CHROMIC ACID/FLEMMING’S FLUID: fixative + decalcifying agent, inhibit nuclear
staining
CITRIC ACID-CITRATE BUFFER 4.5pH: use chloroform as prsv., excellent nuclear
and cytoplasmic staining
VON EBNER’S FLUID: good cytologic staining, for teeth and small bones
DEGREE OF DECALCIFICATION:
▪ shortened/prolonged = unsatisfactory
▪ prolonged = maceration, destruction
▪ underdecalcification = interfere normal cutting