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Rubella Virus Wordnya Ya
Rubella Virus Wordnya Ya
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ACCESSION NC_001545
KEYWORDS RefSeq.
PUBMED 17325367
PUBMED 11884543
TITLE Sequence of the genome RNA of rubella virus: evidence for genetic
rearrangement during togavirus evolution
PUBMED 2353453
TITLE Sequence of the region coding for virion proteins C and E2 and the
PUBMED 2836271
TITLE Molecular cloning and sequencing of the region of the rubella virus
PUBMED 3755848
JOURNAL Unpublished
FEATURES Location/Qualifiers
source 1..9762
/organism="Rubella virus"
/mol_type="genomic RNA"
/strain="F-Therien"
/db_xref="taxon:11041"
/clone="pRUB1025"
gene 41..6391
/locus_tag="RUBVgp1"
/db_xref="GeneID:1502161"
CDS 41..6391
/locus_tag="RUBVgp1"
/codon_start=1
/product="non-structural polyprotein"
/protein_id="NP_062883.2"
/db_xref="GI:336284683"
/db_xref="UniProtKB/TrEMBL:P13889"
/db_xref="GeneID:1502161"
/translation="MEKLLDEVLAPGGPYNLTVGSWVRDHVRSIVEGAWEVRDVVTAA
QKRAIVAVIPRPVFTQMQVSDHPALHAISRYTRRHWIEWGPKEALHVLIDPSPGLLRE
VARVERRWVALCLHRTARKLATALAETASEAWHADYVCALRGAPSGPFYVHPEDVPHG
GRAVADRCLLYYTPMQMCELMRTIDATLLVAVDLWPVALAAHVGDDWDDLGIAWHLDH
DGGCPADCRGAGAGPTPGYTRPCTTRIYQVLPDTAHPGRLYRCGPRLWTRDCAVAELS
WEVAQHCGHQARVRAVRCTLPIRHVRSLQPSARVRLPDLVHLAEVGRWRWFSLPRPVF
QRMLSYCKTLSPDAYYSERVFKFKNALCHSITLAGNVLQEGWKGTCAEEDALCAYVAF
RAWQSNARLAGIMKGAKRCAADSLSVAGWLDTIWDAIKRFLGSVPLAERMEEWEQDAA
VAAFDRGPLEDGGRHLDTVQPPKSPPRPEIAATWIVHAASEDRHCACAPRCDVPRERP
SAPAGQPDDEALIPPWLFAERRALRCREWDFEALRARADTAAAPAPPAPRPARYPTVL
YRHPAHHGPWLTLDEPGEADAALVLCDPLGQPLRGPERHFAAGAHMCAQARGLQAFVR
VVPPPERPWADGGARAWAKFFRGCAWAQRLLGEPAVMHLPYTDGDVPQLIALALRTLA
QQGAALALSVRDLPGGAAFDANAVTAAVRAGPRQSAAASPPPGDPPPPRRARRSQRHS
DARGTPPPAPARDPPPPAPSPPAPPRAGDPVPPIPAGPADRARDAELEVACEPSGPPT
STRADPDSDIVESYARAAGPVHLRVRDIMDPPPGCKVVVNAANEGLLAGSGVCGAIFA
NATAALAANCRRLAPCPTGEAVATPGHGCGYTHIIHAVAPRRPRDPAALEEGEALLER
AYRSIVALAAARRWACVACPLLGAGVYGWSAAESLRAALAATRTEPVERVSLHICHPD
RATLTHASVLVGAGLAARRVSPPPTEPLASCPAGDPGRPAQRSASPPATPLGDATAPE
PRGCQGCELCRYTRVTNDRAYVNLWLERDRGATSWAMRIPEVVVYGPEHLATHFPLNH
YSVLKPAEVRPPRGMCGSDMWRCRGWHGMPQVRCTPSNAHAALCRTGVPPRASTRGGE
LDPNTCWLRAAANVAQAARACGAYTSAGCPKCAYGRALSEARTHEDFAALSQRWSASH
ADASPDGTGDPLDPLMETVGCACSRVWVGSEHEAPPDHLLVSLHRAPNGPWGVVLEVR
ARPEGGNPTGHFVCAVGGGPRRVSDRPHLWLAVPLSRGGGTCAATDEGLAQAYYDDLE
VRRLGDDAMARAALASVQRPRKGPYNIRVWNMAAGAGKTTRILAAFTREDLYVCPTNA
LLHEIQAKLRARDIDIKNAATYERRLTKPLAAYRRIYIDEAFTLGGEYCAFVASQTTA
EVICVGDRDQCGPHYANNCRTPVPDRWPTERSRHTWRFPDCWAARLRAGLDYDIEGER
TGTFACNLWDGRQVDLHLAFSRETVRRLHEAGIRAYTVREAQGMSVGTACIHVGRDGT
DVALALTRDLAIVSLTRASDALYLHELEDGSLRAAGLSAFLDAGALAELKEVPAGIDR
VVAVEQAPPPLPPADGIPEAQDVPPFCPRTLEELVFGRAGHPHYADLNRVTEGEREVR
YMRISRHLLNKNHTEMPGTERVLSAVCAVRRYRAGEDGSTLRTAVARQHPRPFRQIPP
PRVTAGVAQEWRMTYLRERIDLTDVYTQMGVAARELTDRYARRYPEIFAGMCTAQSLS
VPAFLKATLKCVDAALGPRDTEDCHAAQGKAGLEIRAWAKEWVQVMSPHFRAIQKIIM
RALRPQFLVAAGHTEPEVDAWWQAHYTTNAIEVDFTEFDMNQTLATRDVELEISAALL
GLPCAEDYRALRAGSYCTLRELGSTETGCERTSGEPATLLHNTTVAMCMAMRMVPKGV
RWAGIFQGDDMVIFLPEGARSAALKWTPAEVGLFGFHIPVKHVSTPTPSFCGHVGTAA
GLFHDVMHQAIKVLCRRFDPDVLEEQQVALLDRLRGVYAALPDTVAANAAYYDYSAER
VLAIVRELTAYARGRGLDHPATIGALEEIQTPYARANLHDAD"
mat_peptide 41..3943
/locus_tag="RUBVgp1"
/product="protease p150"
protease domain."
/protein_id="YP_004617077.1"
/db_xref="GI:336319054"
mat_peptide 3944..6388
/locus_tag="RUBVgp1"
/product="RNA-directed RNA
polymerase/triphosphatase/helicase p90"
/protein_id="YP_004617078.1"
/db_xref="GI:336319055"
gene 6435..9762
/locus_tag="RUBVgp2"
/db_xref="GeneID:1502162"
mRNA 6435..9762
/locus_tag="RUBVgp2"
/product="subgenomic RNA"
template"
/db_xref="GeneID:1502162"
CDS 6512..9703
/locus_tag="RUBVgp2"
/codon_start=1
/product="structural polyprotein"
/protein_id="NP_062884.1"
/db_xref="GI:9790312"
/db_xref="UniProtKB/TrEMBL:P19725"
/db_xref="GeneID:1502162"
/translation="MASTTPITMEDLQKALEAQSRALRAELAAGASQSRRPRPPRQRD
SSTSGDDSGRDSGGPRRRRGNRGRGQRRDWSRAPPPPEERQETRSQTPAPKPSRAPPQ
QPQPPRMQTGRGGSAPRPELGPPTNPFQAAVARGLRPPLHDPDTEAPTEACVTSWLWS
EGEGAVFYRVDLHFTNLGTPPLDEDGRWDPALMYNPCGPEPPAHVVRAYNQPAGDVRG
VWGKGERTYAEQDFRVGGTRWHRLLRMPVRGLDGDSAPLPPHTTERIETRSARHPWRI
RFGAPQAFLAGLLLATVAVGTARAGLQPRADMAAPPTLPQPPCAHGQHYGHHHHQLPF
LGHDGHHGGTLRVGQHYRNASDVLPGHWLQGGWGCYNLSDWHQGTHVCHTKHMDFWCV
EHDRPPPATPTPLTTAANSTTAATPATAPAPCHAGLNDSCGGFLSGCGPMRLRHGADT
RCGRLICGLSTTAQYPPTRFGCAMRWGLPPWELVVLTARPEDGWTCRGVPAHPGARCP
ELVSPMGRATCSPASALWLATANALSLDHALAAFVLLVPWVLIFMVCRRACRRRGAAA
ALTAVVLQGYNPPAYGEEAFTYLCTAPGCATQAPVPVRLAGVRFESKIVDGGCFAPWD
LEATGACICEIPTDVSCEGLGAWVPAAPCARIWNGTQRACTFWAVNAYSSGGYAQLAS
YFNPGGSYYKQYHPTACEVEPAFGHSDAACWGFPTDTVMSVFALASYVQHPHKTVRVK
FHTETRTVWQLSVAGVSCNVTTEHPFCNTPHGQLEVQVPPDPGDLVEYIMNYTGNQQS
RWGLGSPNCHGPDWASPVCQRHSPDCSRLVGATPERPRLRLVDADDPLLRTAPGPGEV
WVTPVIGSQARKCGLHIRAGPYGHATVEMPEWIHAHTTSDPWHPPGPLGLKFKTVRPV
ALPRTLAPPRNVRVTGCYQCGTPALVEGLAPGGGNCHLTVNGEDLGAVPPGKFVTAAL
LNTPPPYQVSCGGESDRATARVIDPAAQSFTGVVYGTHTTAVSETRQTWAEWAAAHWW
QLTLGAICALPLAGLLACCAKCLYYLRGAIAPR"
mat_peptide 6512..7411
/locus_tag="RUBVgp2"
/product="capsid protein"
/protein_id="NP_740662.1"
/db_xref="GI:25121514"
mat_peptide 7412..8257
/locus_tag="RUBVgp2"
/protein_id="NP_740663.1"
/db_xref="GI:25121515"
mat_peptide 8258..9700
/locus_tag="RUBVgp2"
/protein_id="NP_740664.1"
/db_xref="GI:25121516"
ORIGIN