Professional Documents
Culture Documents
Fredrik Lindmark
Umeå 2005
Copyright © 2005 by Fredrik Lindmark
ISSN 0346-6612
ISBN 91-7305-962-5
Table of contents
Abstract, 3
Populärvetenskaplig sammanfattning, 5
Original studies, 7
List of Abbreviations, 8
Introduction, 9
Risk factors for prostate cancer, 10
Dietary factors, 10
Hormonal and other physiological factors, 11
Familial and genetic factors, 11
Inflammation and cancer, 15
The role of inflammation in the pathogenesis of prostate cancer, 17
Molecular pathology, 17
Epidemiology, 19
Genetics, 22
Cytokines in prostatic inflammation and prostate cancer, 24
Aims, 29
Material and methods, 30
Hereditary prostate cancer families used for mutation screening, 30
Patients with prostate cancer and controls, 30
The Northern Sweden Health and Disease Cohort, 30
CAPS, 30
Genetic analysis, 33
Genomic PCR, 33
Mutation screening, 33
Common sequence variants of the MSR-1 gene, 34
Association of MIC-1 sequence variants and prostate cancer, 35
Association of IL1-RN haplotype with prostate cancer risk, 36
Determination of MIC-1 serum levels, 38
Statistical analysis, 38
Tests for Hardy-Weinberg Equilibrium, 38
Association analysis, 39
Haplotype analysis, 39
Assessment of serum levels, 39
Results and comments, 40
Genetic analysis of MSR1 (Study I), 40
Genetic analysis of IL-1RN (Study II), 43
Genetic analysis of MIC-1 (Study III), 46
Analysis of MIC-1 serum levels (Study IV), 48
Discussion, 55
2 Prostate Cancer and Inflammatory Genes
Association studies, 55
Cytokine polymorphisms in prostate cancer, 58
Future perspectives, 61
Conclusions, 62
Acknowledgements, 63
References, 64
Original studies
I
II
III
IV
Prostate Cancer and Inflammatory Genes 3
Abstract
Prostate cancer remains a significant health cancer and identified 18 sequence variants.
concern for men throughout the world. One previously reported truncation
Accumulating epidemiologic and molecular mutation was found more frequently in men
evidence suggests that inflammation is an with prostate cancer than in unaffected men,
important component in the aetiology of in accordance with previously published
prostate cancer. Supporting this hypothesis, results. However, the difference in
population studies have found an increased frequencies we found between these groups
risk of prostate cancer in men with a prior was not statistically significant. In addition,
history of certain sexually transmitted we genotyped five common polymorphisms
infections or prostatitis. More general in MSR1 in 215 men with unselected
evidence of a relationship between prostate cancer and 425 controls. No
inflammation and prostate cancer has been association between any of the five common
provided by reports indicating that daily use variants and prostate cancer were found.
of non steroidal anti-inflammatory drugs We then performed a comprehensive
(NSAIDs) may be associated with a lower genetic study using extensive population-
incidence of prostate cancer. The exact based case-control material to evaluate
mechanism whereby inflammation might act possible associations between sequence
in tumour development and progression variants in inflammation-related genes and
remains to be elucidated, but is likely to be prostate cancer. The first gene to be
complex. The genetic contribution to examined was interleukin-1 receptor antagonist
inflammatory responses involved in the (IL-1-RN), encoding a cytokine that plays an
development of prostate cancer has not yet important role in regulation of the
been extensively or systematically studied. inflammatory response by binding to the IL-
However, this thesis evaluates the role of 1 receptor and thus inhibiting the binding of
various inflammation-related genes in the the pro-inflammatory cytokines IL-1α and
pathogenesis of prostate cancer. IL-1β. Collectively, these three cytokines
The macrophage scavenger receptor 1 exert a central role in the protection against
(MSR1) is a transmembrane protein that is diverse lesions, ranging from microbial
mainly expressed by macrophages. This colonisation to infection and malignant
receptor mediates the binding, transformation. The genetic analysis of IL-
internalization and processing of a wide 1RN revealed that the most common
range of macromolecules, and is suggested haplotype was significantly associated with
to play a major role in the recognition and prostate cancer risk for patients with
clearance of pathogenic and damaged cells. prostate cancer, and further this association
Recent reports have suggested MSR1 to be a appears to be stronger in cases with
candidate gene for hereditary prostate advanced disease.
cancer. Therefore, we screened the MSR1 The macrophage inhibitory cytokine-1 (MIC-
gene among men with hereditary prostate 1), a member of the transforming growth-
4 Prostate Cancer and Inflammatory Genes
factor-β superfamily has been shown to associated with an increased risk for prostate
exert diverse biological functions, including cancer. Further, the clear relation between
regulation of macrophage activity in the clinical stage and MIC-1 level also suggest
inflammatory response and both growth that MIC-1 may be useful as a prognostic
inhibition and induction of apoptosis in factor, where high serum concentration is
epithelial and other tumour cell lines. The associated with a poor prognosis.
genetic analysis of MIC-1 revealed that a In summary, our results provide further
seuqence variant (H6D) appears to be support for the assumption that
associated with a decreased prostate cancer polymorphisms in inflammatory genes play
risk. We also performed measurements of critical roles in prostate cancer susceptibility.
MIC-1 serum levels among patients with Additional studies are needed to elucidate
prostate cancer and healthy controls. These the mechanisms whereby the demonstrated
data indicate that serum MIC-1 levels are variations contribute to prostate cancer
development.
Prostate Cancer and Inflammatory Genes 5
Populärvetenskaplig sammanfattning
Antalet män som insjuknar i prostatacancer försvar mot invaderande patogener har blivit
har ökat markant under de två senaste utförligt studerade.
decennierna, vilket lett till att den blivit den I det första arbetet undersöktes om
vanligast diagnostiserade cancerformen sekvensvariationer i en gen kallad Macrophage
bland män i de flesta industrialiserade Scavenger Receptor 1 (MSR1), kan påverka
länderna. År 2002 diagnostiserades 679,000 risken att insjukna i prostatacancer. MSR1 är
nya fall av prostatacancer världen över, ett protein lokaliserat i cellens membran och
medan 221,000 män avled av samma är i huvudsak uttryckt av makrofager.
sjukdom. Orsaken till incidensökningen Proteinet fungerar som en receptor med
beror delvis på förbättrade diagnosmetoder, möjlighet att binda till sig en mängd olika
men detta förklarar inte hela stegringen utan substanser, som lipopolysackarider
andra okända faktorer är också involverade. (fragment från bakterier), och oxiderade
De senaste decennierna har ett flertal studier lipoproteiner. Efter inbindning tas dessa upp
visat att inflammationsprocesser i av den aktuella cellen. Funktionen hos
prostatakörteln är en betydande faktor i MSR1 är inte helt klarlagd men den är bland
utvecklingen av prostatacancer. Den exakta annat involverad i igenkänning och
mekanismen för hur inflammation eliminering av patogener och skadade celler.
medverkar till utveckling och progression av Tidigare studier i en amerikansk population
tumörer i prostatakörteln är fortfarande har visat att mutationer i denna gen skulle
höljd i dunkel men är antagligen en komplex kunna ha betydelse för utvecklingen av
process. prostatacancer. Vi screenade MSR1 genen
Det mänskliga genomet består av ungefär hos män med ärftlig prostatacancer och
30000 olika gener. Alla dessa gener uppvisar identifierade ett antal sekvensvariationer. Ett
olika grad av strukturell variation mellan urval av dessa sekvensvariationer
olika individer. Denna variation kan i sin tur undersöktes bland 215 män med oselekterad
leda till en förändrad funktion hos det prostatacancer och 425 kontroller, men
protein som en gen kodar för, eller att ingen av dem medförde en förändrad risk att
mängden protein som produceras varierar. insjukna i prostatacancer. Våra resultat
Även gener involverade i inflammations- stödjer ej tidigare publicerade resultat där
processer uppvisar en sådan genetisk sekvensvariationer i MSR1-genen skulle ha
variation. Om denna variation har någon betydelse för uppkomsten av prostatacancer.
betydelse för risken att utveckla I nästföljande studier använde vi oss av
prostatacancer har inte tidigare blivit ett stort populationsbaserat
utförligt studerat. I denna avhandling har vi fall/kontrollmaterial med 780
studerat hur genetisk variation i olika prostatacancerfall och 1383 friska kontroller
inflammationsrelaterade gener påverkar för att studera om genetisk variation hos
risken att utveckla prostatacancer. Tre gener, inflammationsrelaterade gener medför en
vilka alla är involverade i reglering av ökad eller minskad risk att insjukna i
inflammationsresponsen eller kroppens prostatacancer.
6 Prostate Cancer and Inflammatory Genes
Den första genen kallad Interleukin-1 Den genetiska analysen av MIC-1 visade att
receptor antagonist (IL1-RN), är ett lösligt en genetisk variant i genen (H6D), medför
protein, en cytokin, som reglerar kroppens en minskad risk att insjukna i prostatacancer.
inflammationsrespons genom att binda till Vidare mättes nivåerna av MIC-1-proteinet i
en Il-1 receptor och därigenom förhindra serum hos patienter med prostatacancer och
inbindning av två andra cytokiner, IL-1α och hos friska män för att se om MIC-1 nivåerna
Il-1β, som normalt driver på var förändrade hos patienter med
inflammationsresponsen. Tillsammans spelar prostatacancer. Analyserna visade att
dessa tre cytokiner en central roll i kroppens serumnivåerna var tydligt förhöjda hos
skydd mot många olika skador, från invasion patienter med prostatacancer. Nivåerna var
av mikrober till malign transformation. också positivt korrelerade med ökande ålder
Balansen mellan pådrivande och inhiberande och tumörstadie. Resultaten indikerar att
cytokiner bestämmer utvecklingen av en MIC-1 skulle kunna vara en användbar
inflammationsrespons. Den genetiska prognostisk faktor, där höga serumnivåer är
analysen av IL-1RN visade att bärare av den associerade med en dålig prognos.
vanligast förekommande sekvens- Således visar våra resultat att genetisk
kombinationen (haplotypen) av IL1-RN- variation i inflammationsrelaterade gener har
genen medför en ökad risk att insjukna i betydelse för uppkomst av prostatacancer.
prostatacancer. För att förstå med vilka mekanismer denna
Macrophage inhibitory cytokine-1 (MIC-1) är variation kan påverka utvecklingen av cancer
en medlem i en stor familj av proteiner är vidare studier nödvändiga. Vi fann också
kallade transforming growth factor β att mätning av MIC-1-nivåer i serum skulle
superfamily, som har visat sig medverka i en kunna vara av kliniskt värde som
mängd olika viktiga biologiska funktioner, prognostisk markör vid prostatacancer.
inkluderat reglering av inflammations-
responsen, tillväxthämning, men också
induktion av apoptosmekanismer i olika
tumörcellinjer.
Prostate Cancer and Inflammatory Genes 7
Original studies
List of Abbreviations
Introduction
In most developed countries, prostate lesions are found in the transition zone,
cancer is not only the most frequently which is located in the periurethral region
diagnosed malignancy in men, but also the (McNeal, 1968, 1988). Prostate cancer is
second leading cause of cancer-related commonly multifocal, i.e. there is generally
deaths in males. In 2002, an estimated more than one tumour with different origins
679,000 prostate cancer diagnoses were in the prostate at the time of diagnosis
made worldwide, accompanied by an (McNeal, 1988). Each of these tumours can
estimated 221,000 prostate cancer deaths show remarkable differences in gene
(Parkin et al., 2005). In Sweden, over 9000 expression and behaviour, which are
new diagnoses of prostate cancer were associated with varying prognoses. In its
recorded in the year 2003, accounting for clinical form, prostate cancers are diagnosed
35.3 % of cancer diagnoses among men that upon histological evaluation of needle
year (fig.1). Further, 2350 men died from biopsy samples of prostate tissue, and
this disease 2003. Although the incidence of classified as either local or advanced. In
prostate cancer is increasing steadily in localized disease, the treatments range from
almost all countries, the aetiology and radical prostatectomy, radiotherapy and
molecular mechanisms underlying the application of anti-androgens to “watchful
development and progression of the disease waiting” (Afrin et al., 2000; Drachenberg,
is still large unknown. 2000). If the cancer has spread outside the
Prostate cancer is often regarded as a prostate, with lymph nodes and bone being
disease of older men, but nearly a third of the most common sites for metastasis, the
men aged between 30 and 40 years have most common treatment is surgical or
been found to harbour small foci of prostate chemical castration, to lower androgen
cancer (Sakr et al., 1994). The majority of levels, causing reductions in tumour growth
these lesions are diagnosed at a much later and symptomatic relief, but not a cure.
age or do not progress to clinically However, after one to two years most
detectable tumours within the lifetime of the tumours will relapse to an androgen-
affected men. Cancer lesions can develop in independent, but still androgen receptor-
two different regions of the prostate gland, dependent, state that normally kills the
most commonly (in ~80% of cases) in the patient (Afrin et al., 2000; Drachenberg,
periphery zone, while most of the remaining 2000; Feldman et al., 2001).
10 Prostate Cancer and Inflammatory Genes
Figure 1. Cancer incidence in Sweden 2003. The ten most frequently specified
cancer sites among men, according to the National Board of Health and Welfare.
The etiological factors associated with variations in prostate cancer rates. A large
prostate cancer are varied and particularly number of epidemiological studies have
poorly understood compared to other investigated the association between dietary
common cancers. factors and prostate cancer, but the findings
The observation that prostate cancer risk have been mixed.
increases for Japanese immigrants to Hawaii Dietary fat. There is considerable
and Japanese immigrants to Los Angeles, consistency across studies indicating that a
suggests that diet and environmental high intake of fat, especially total fat and
differences play important roles (Shimizu et saturated fat, is a risk factor for prostate
al., 1991; Minami et al., 1993). However, the cancer (Kolonel, 2001). The mechanisms
increase is only to about 50% of the rate for mediating the effects of fat on prostate
Caucasian people and to 25% of that for carcinogenesis are not known, but it is
African-American people in the USA, hypothesized that the effect of dietary
suggesting that differences between ethnic factors, such as fat, may be mediated
populations are substantial and that through endogenous hormones (Bosland,
differences in incidence rate cannot be 2000).
explained solely by differences in the Phytoestrogens. Soy products contain
environment and lifestyle (Grönberg, 2003). isoflavonoids that have been shown to have
a prophylactic effect on prostate cancer
Dietary factors (Holzbeierlein et al., 2005). People in Asian
countries eat more soy products than people
Dietary habits are probably an important in Western countries and higher levels of
factor that contributes to the geographic phytoestrogen metabolites have been
Prostate Cancer and Inflammatory Genes 11
risks is difficult, especially since the genetic and non-genetic risk factors (Schaid,
magnitude of the risks is similar for both 2004).
Various carcinomas (including cancers of cell type, orchestrating and directing the
the liver, bladder, colon, stomach, and healing process. Normally, inflammation is a
oesophagus) have been shown to arise from self-limiting process due to the production
areas of infection and inflammation. Over of anti-inflammatory cytokines that buffer
15% of all malignancies worldwide are the effect of pro-inflammatory cytokines.
attributable to infectious agents, and The cytokine/chemokine pattern persisting
inflammation is a major component of these at the inflammatory site is important in the
chronic infections (Kuper et al., 2000). development of chronic disease.
Colon cancers arising in individuals with Dysregulation of any of the cooperating
inflammatory bowel disease (e.g. chronic factors can lead to prolonged inflammation
ulcerative colitis or Crohn’s disease) and with chronic exposure to cytotoxic
stomach cancers caused by chronic mediators. (Coussens et al., 2002). Chronic
Helicobacter pylori infection are among the inflammation can be caused by a variety of
most intensively studied and well established factors, including bacterial, viral, and
types of cancer associated with inflammation parasitic infections, chemical irritants, and
of different origins (Coussens et al., 2002). non-digestible particles, but often the
Inflammation involves the induction of underlying cause is unknown. The longer the
complex, coordinated chemical signals and inflammation persists, the higher the risk of
associated physiological processes following associated carcinogenesis (Shacter et al.,
injury that promote “healing” of damaged 2002).
tissues. Early responses include increases in At the site of inflammation, caused by
vascular permeability and activation, either wounding or infection, phagocytic
together with the directed migration of cells (e.g. neutrophils and macrophages)
leukocytes (neutrophils, monocytes and generate reactive oxygen and nitrogen
eosinophils) towards the site of injury, where substances, but these cells also synthesize
the ground-work is being laid for the and secrete large quantities of growth factors
formation of a new extracellular matrix. The and a number of potent angiogenic factors,
directional migration is mediated by secreted cytokines, and proteases, all of which are
chemokines that form a concentration important mediators in the tissue
gradient towards the site of inflammation. regeneration, but can also potentiate
The extracellular matrix provides the neoplastic tumorigenesis. The focus of
structure upon which cells (fibroblasts and interest has been the individual function of
endothelial cells) can migrate and proliferate, the different mediators, but in the
regenerating new tissue and a vascular inflammation response there is significant
network. In later stage of the inflammatory interaction and synergy among them – for
response, the macrophages are the dominant example, prostaglandins induce the
16 Prostate Cancer and Inflammatory Genes
Although it has been established that processes and the development of prostate
chronic inflammation plays a causative role cancer.
in the development of many human cancers,
the contribution of inflammatory processes
to the development of prostate cancer has Molecular pathology
not been extensively studied. However, data
from epidemiological, genetic Focal areas of epithelial atrophy in the
epidemiological and molecular pathology prostate were first observed by pathologists
studies have been accumulated recently more than fifty years ago (FRANKSLM,
suggesting that inflammatory processes are 1954; Rich, 1979). Atrophy of the prostate is
also involved in the development of prostate identified as a reduction in the volume of
cancer. The chronic inflammatory the glands and can be divided into two
microenvironment, characterized by the major patterns: diffuse and focal. Diffuse
accumulation of macrophages and atrophy is a reduction that involves the
lymphocytes, is extremely common in the entire prostate and is caused by a decreased
tissue stroma and epithelium of the prostate level of circulating androgens. Focal atrophy,
and may support both the initiation and on the other hand, occurs primarily, but not
progression of prostate cancer (Lucia et al., exclusively, in the outer part of the gland,
2004). The following description highlights where prostate cancer normally arises
connections between inflammatory
18 Prostate Cancer and Inflammatory Genes
(McNeal, 1988; Feneley et al., 1996; Ruska et prostate cancer tissue are approximately
al., 1998; De Marzo et al., 1999). Focal 70% and 90%, respectively (Jerónimo et al.,
atrophy is not related to reduced levels of 2001; Lin et al., 2001).
circulating androgens, compared with In addition, chromosome 8
normal prostatic epithelium, and the abnormalities, which are common in
condition is highly proliferative without any prostate cancer, have been found in areas of
increase in apoptosis. Focal atrophy is often PIA lesions. Acquired somatic chromosome
associated with acute or chronic 8 abnormalities have been noted in about
inflammation, reflected by infiltration of 1% of normal prostate tissue, 4% of PIA
inflammatory cells (lymphocytes, lesions, and about 6% of adenocarcinomas
macrophages and polymorphonuclear cells) (Shah et al., 2001). Other studies have
(Ruska et al., 1998; De Marzo et al., 1999). reported p53 mutations in 5% of PIA
Due to the combined findings of high lesions, a rate similar to that seen in high-
proliferation indices and inflammatory grade PIN, compared to 20% of prostate
infiltrations seen in these lesions, the term cancer cases (Tsujimoto et al., 2002). Thus,
proliferative inflammatory atrophy, or PIA, these are genetic changes that are associated
was introduced (De Marzo et al., 1999). The with PIN and prostate cancer.
underlying causes of PIA lesions are still not De Marzo et al. examined expression
clearly understood, but they may arise either patterns of three molecular markers
as a consequence of epithelial damage (from implicated in prostatic carcinogenesis: p27,
infection, ischemia, or toxin exposure) or as Bcl-1 and GSTP1 (De Marzo et al., 1999).
a direct consequence of inflammatory p27 is a cyclin-dependent kinase inhibitor
oxidant damage to the epithelium (Platz et whose expression suppresses the cell cycle
al., 2004). and is usually reduced in prostatic
Accumulating evidence from adenocarcinomas and high-grade PIN. The
morphological, immunohistochemical and cited authors reported a down-regulation of
genetic studies have provided support for p27 in PIA. They also observed an increase
the concept that PIA lesions may be in Bcl-2 expression, as previously reported
precursors to prostate cancer, partly because by Ruska et al. (Ruska et al., 1998), which is
the vast majority of such lesions are found consistent with the very low levels of
adjacent to or near early adenocarcinomas or apoptosis. Moreover, they found increased
high grade prostatic intraepithelial levels of GSTP1 in many lesions suggesting,
neoplasms, or both (Feneley et al., 1996; De together with the elevated levels of GSTA1
Marzo et al., 1999; Putzi et al., 2000). Further and COX-2 reported in other studies
support for the hypothesis comes from the (Parsons et al., 2001; Zha et al., 2004), that a
fact that PIA shares several molecular stress-induced response has occurred in
alterations found in both Prostate these cells. Accumulating evidence also
Intraepithelial Neoplasia (PIN) and prostate indicates that many of the atrophic luminal
cancer. Nakayama et al. reported that cells in PIA represent a form of intermediate
approximately 6% of PIA lesions show epithelial cell with high proliferative activity.
evidence of somatic hypermethylation of the These cells share features of both basal and
GSTP1 gene promoter (Nakayama et al., luminal secretory cells, and hence are
2003). Correspnding levels of GSTP1 postulated to be targets of neoplastic
hypermethylation in PIN lesions and
Prostate Cancer and Inflammatory Genes 19
transformation in the prostate (van Leenders 2-10% of men experience it during their
et al., 2003). lifetime (Habermacher et al., 2005). The
Even though PIA lesions may be an early clinical presentation is characterised by
histological precursor to prostate cancer, it is uncomfortable symptoms, such as dysuria,
important to note that some studies have and rectal and suprapubic pain (Roberts et
not found an association between PIA and al., 1998) Prostatitis is classified into four
prostate cancer (De Marzo et al., 2003) and, categories: I, acute bacterial; II, chronic
moreover, not all cancers occur within or in bacterial; III, chronic nonbacterial/chronic
the vicinity of PIA. In fact, PIA may simply pelvic pain syndrome; and IV, asymptomatic
indicate an intraprostatic environment that prostatitis. Both acute bacterial prostatitis
favours to prostate cancer development. (which is usually caused by Escherichia coli)
Nevertheless, further studies are needed to and chronic bacterial prostatitis (caused by
elucidate the relationship between focal E. coli and several other infectious agents)
atrophy and cancer in the prostate. are normally treated with antibiotics.
Chronic inflammation, with a Chronic non-bacterial prostatitis/chronic
predomination of lymphocytes and pelvic pain syndrome, is the most common
macrophages, is extremely common in the form, affecting 90-95% of patients with
prostate. However, examination of prostatitis. Men with this type of prostatitis
prostatectomy specimens seldom shows may experience symptoms for weeks to
inflammatory infiltrates in the malignant years, and current therapy has limited
tissue, whereas directly adjacent benign success in alleviating the pain that the
tissue can be heavily infiltrated (Lucia et al., patients experience. Asymptomatic
2004). To date, the relationship between prostatitis is a histological diagnosis of
lymphocytic infiltration in the tumour and prostate inflammation that is found
progression of tumour development in the subsequent to pathological examination of
prostate is uncertain, but the results from the prostate tissue. This category is found in
two studies evaluating the connection a significant number of patients;
between inflammatory infiltration and epidemiologic studies have estimated the
survival indicate that lymphoid aggregates prevalence to be as high as 32.2% in a
within the tumour are associated with a poor population of men with elevated PSA (van
outcome in patients with prostate cancer Leenders et al., 2003).
(Irani et al., 1999; McArdle et al., 2004). Several case-control studies have
Furthermore, increased macrophage activity investigated the association between prostate
in the tumour has also been found to be cancer and prostatitis, with variable results.
related to poor prognosis in prostate cancer In 2002, Dennis et al. performed a meta-
(Lissbrant et al., 2000). Why the presence of analysis of 11 case-control studies that
increased in lymphocytic aggregates would evaluate the possible relationship between
be associated with poor cancer specific prostatitis and prostate cancer. The meta-
survival rates remains unexplained. analysis found an increased risk of prostate
cancer among men with a history of clinical,
Epidemiology or symptomatic prostatitis (OR=1.6; 95%
CI, 1.0-2.4), particularly in population-based
Prostatitis and prostate cancer. Prostatitis case-control studies (OR=1.8; 95% CI, 1.1-
is a common urological disorder worldwide; 3.0) (Dennis et al., 2002b). However, the
20 Prostate Cancer and Inflammatory Genes
STIs was further supported by RR have found variable results, ranging from no
increasing with increasing frequency of association to statistically significantly higher
sexual activity (RR=1.20; 95% CI, 1.11- risks for HPV-seropositive men (reviewed in
1.30), for men reporting more than 30 sexual (Palapattu et al., 2004)).
partners (RR=1.27; 95% CI, 1.08-1.49), and The meta-analysis by Taylor et al. also
for men who visited prostitutes (RR=1.19; examined the associations between HPV
95% CI, 1.01-1.41). infection and prostate cancer risk detected in
Recently, Taylor et al. performed a new ten studies using either serological or PCR-
meta-analysis, including 29 case-control based evidence of HPV infections. The
studies, which corroborated the previous results showed an OR of 1.39 (95% CI,
findings (Taylor et al., 2005). The study 1.13-1.71). Notably, while HPV is known to
demonstrated a signficantly elevated OR for be an oncogenic virus, its influence on
prostate cancer for all STIs (OR=1.48, 95% prostate carcinogenesis may be independent
CI 1.26-1.73), and for gonorrhea (OR=1.35; of inflammation.
95% CI, 1.05-1.83). However, the results Detection of infectious agents in prostate tissue:
should be interpreted with caution, since Several studies have investigated the
most of these studies were retrospective presence of infectious agents in the prostate
case-control studies, and thus may have tissue. Various viruses and bacteria have
been affected by bias in recall between cases been found, but the results have been
and controls. Also, a history of STIs may inconsistent, possibly due to methodological
not be causally associated with prostate differences (such as differences in the tissue
cancer, but may be simply be a surrogate for handling and detection methods), or
other lifestyle risk factors for prostate cancer possible contamination from agents in areas
(Platz et al., 2004) Furthermore, since these close to the prostate, e.g., the urethra. It is
two meta-analyses, a number of studies have also worth noting that STIs detected in the
been published reporting inconsistent prostate cancer tissues could have been
association between STIs and prostate acquired after the initiation of
cancer risk (Giles et al., 2003; Fernández et carcinogenesis. Furthermore, the failure to
al., 2005; Patel et al., 2005). detect infectious agents in the prostate tissue
Serological markers: Several epidemiological does not necessarily mean that such agents
studies have also reported associations play no role in prostate carcinogenesis, as
between prostate cancer and circulating some may be cleared after causing damage
serum IgG antibodies against agents (Platz et al., 2004). Human papilloma viruses,
infecting the genito-urinary tract. One study human herpes virus-8, Herpes simplex virus-
reported an increased risk for prostate 2, cytomegalovirus and Epstein-Barr virus
cancer among men who showed serological are some of the agents that have been
evidence of syphilis (OR=1.8; 95% CI, 1.0- found, see the review by Palapattu et al. for
3.5) (Hayes et al., 2000), while studies further information (Palapattu et al., 2004).
investigating possible serological links In 2005, Cohen and co-workers
between Chlamydia trachomatis and performed an exploratory study to detect the
prostate cancer reported null results (Dillner presence of bacterial agents in prostate
et al., 1998). Five studies investigating tissue from patients with prostate cancer
possible associations between human (Cohen et al., 2005). They reported a
papilloma virus (HPV) and prostate cancer predominant presence of the gram-positive
22 Prostate Cancer and Inflammatory Genes
bacterium Propionibacterium acnes, which been identified, some of which indicate that
moreover showed a positive association with inflammation may be an important mediator
prostatic inflammation. P. acnes is a slow- in the development of prostate cancer. The
growing microbe that is known to be a following sections summarise some of the
potent stimulant of the immune system, and germline and somatic genomic changes
it is highly resistant to killing and suggesting that infection or inflammation of
degradation by human neutrophils and the prostate contributes to the development
monocytes, a characteristic which allows it of prostate cancer.
to establish long-term low-grade infections
that may persist for years to decades. A GSTP1
independent study using PCR-based GSTPs represent a superfamily of enzymes
technique, found P.acnes twice as common that play an important role in detoxification
in prostate tissue from patients with benign by catalyzing the conjugation of many
prostatic hyperplasia that later developed hydrophobic and electrophilic compounds
cancer compared to those that did not with reduced glutathione. GSTP1 appears to
(personal communication, Oleg Alexyev). act as a “caretaker” gene, defending prostate
cells against genome damage mediated by
Genetics carcinogens. In the normal prostate
epithelium, GSTP1 is expressed
As described above, multiple pieces of predominantly in basal cells, but not in the
evidence have been accumulated supporting columnar secretory cells, although the
the view that genetic factors play a role in enzyme may be induced in columnar
prostate cancer susceptibility and epithelial cells that are subjected to genome-
pathogenesis. Unlike some carcinomas such damaging stresses. An elevated level of
as those of the colon (Klump et al., 2004) GSTP1 is a histological characteristic of
and pancreas cancer (Jaffee et al., 2002), proliferative inflammatory atrophy, strongly
where relatively common somatic genetic indicating that a stress-induced response has
alterations are observed (e.g. mutations in been induced in these cells (De Marzo et al.,
p53 and K-ras), gene mutations in prostate 1999). GSTP1 can undergo somatic
cancer display a great deal of heterogeneity, alterations, especially hypermethylation of
not only from case to case, but also from CpG islands of regulatory sequences at the
lesion to lesion in a single cases. The GSTP1 locus, which prevents the
heterogeneity of genomic defects in prostate transcription of GSTP1. Abnormal
cancer suggests that prostate cancers may hypermethylation of CpG islands of
arise as a consequence of either chronic or regulatory sequences at the GSTP1 locus is
prolonged exposure to genome-damaging associated with decreased transcriptional
stresses, defective maintenance of genome activity. Such hypermethylation occurs in
integrity, or a combination of both, and thus many types of human cancers (Jones et al.,
no single dominant molecular pathway is 2002), it has been reported to be the most
responsible for prostate carcinogenesis (De common somatic genome alteration in
Marzo et al., 2004). prostate cancer and it represents an early
To date, a substantial number of event in neoplastic transformation. The
germline prostate cancer susceptibility genes hypermethylation occurs in approximately
as well as somatic genome alterations have 70% of PIN lesions and in over 90% of
Prostate Cancer and Inflammatory Genes 23
prostate carcinomas, but not in normal receptor (MSR1, also known as SR-A, an
prostate tissue or benign prostatic important component of the innate immune
hyperplasia (Jerónimo et al., 2001; Lin et al., system), which occurs in three different
2001). isoforms (I, II, and III) generated by
Recent published data have suggested alternative splicing of a single 11-exon
that heterocyclic amine carcinogens present mRNA. Isoforms I and II are functional
in well-done meat as well as oxidants may be while isoform III is a non-functional protein
detoxified by GSTP1 (Nelson et al., 2001). acting as a dominant negative isoform by
Experimental studies in which LNCaP cells blocking modified low-density lipoprotein
(that do not normally express GSTP1) have uptake (Gough et al., 1998). The functional
been modified to express GSTP1, show that MSR1 protein is a trimeric transmembrane
cells expressing GSTP1 more readily molecule composed of three identical
withstand DNA damage when exposed to protein chains. It has six distinct structural
promutagenic substances and oxidative domains: the amino-terminal cytoplasmic
stress, compared to unmodified LNCaP cells domain, a transmembrane domain, a spacer
(Nelson et al., 2001, 2002). However, in domain, an α-helical coiled coil domain, a
response to oxidant stress, unmodified collagenous domain, and the scavenger
LNCaP cells survive better than LNCaP receptor, cysteine-rich, carboxy-terminal
cancer cells that have been modified to domain (Kodama et al., 1990). MSR1 shows
express high levels of GSTP1. Thus, for unusually broad ligand-binding properties. It
LNCaP prostate cancer cells, loss of the binds a diverse array of macromolecules
GSTP1 function appears to increase genome including bacterial lipopolysaccharide and
damage and decrease cell mortality rates lipoteiochic acid, and both oxidized high-
following exposure to oxidants. This finding density lipoprotein and low-density
of tolerance to oxidative genomic damage in lipoprotein in the serum (Platt et al., 2001).
the absence of functional GSTP1 may be a The function of the receptor in vivo is still
clue regarding the function of somatic not entirely clear, but studies have suggested
GSTP1 inactivation in prostate cancer that these receptors may play a role in
progression (Palapattu et al., 2004). macrophage–host cell interactions,
macrophage adhesion to substrata,
MSR1 endocytosis of ligands, and the recognition
In 2001, Xu et al. published a study with and clearance of foreign pathogenic
suggestive linkage to chromosome 8p22-23 substances and damaged or apoptotic cells
among 159 families (Xu et al., 2001). Further (Platt et al., 2001).
mutation screening studies of hereditary The MSR1 receptor is mainly expressed
prostate cancer families identified a number in macrophages and related cells, and its
of mutations in the macrophage scavenger expression is regulated by a number of
receptor 1 gene (MSR1) that co-segregate factors including cytokines such as M-CSF,
with prostate cancer (Xu et al., 2002). IFNg, and TNFα (Shirai et al., 1999). Mice
MSR1 is a large 11-exon gene located on that are deficient in MSR1 are highly
chromosome 8p22, an area that is frequently susceptible to infection by Listeria
lost in prostate cancer (Matsumoto et al., monocytogenes, Staphylococcus aureus, and herpes
1990). It encodes a Class A scavenger simplex type 1 (Thomas et al., 2000; Ishiguro
et al., 2001), which may be relevant in
24 Prostate Cancer and Inflammatory Genes
responses. Several pro- and anti- TNFα-308, and VEGF-1154) were analyzed
inflammatory cytokines have been identified among 247 prostate cancer cases and 263
in patients with prostatic inflammation and controls. The results showed that IL-8-251
prostate cancer, and their roles have been TT and VEGF-1154 AA genotypes were
studied. In 1998, Alexander et al. measured lower among patients compared with
the levels of the pro-inflammatory cytokines controls (OR=0.66; 95%, CI 0.44-0.99 and
TNFα and IL-1β in the semen of men with OR=0.45; 95% CI, 0.24-0.86, respectively),
chronic prostatitis and compared them with whereas the IL-10-1082 AA genotype was
levels in normal men (Alexander et al., 1998). significantly increased in patients compared
They found that men with prostatitis had with controls (OR=1.78; 95% CI, 1.14-2.77).
higher mean levels of TNFα and IL-1β than Although the influence of cytokine
normal men, as would be expected in an polymorphism on prostatic inflammation
ongoing inflammatory response. These and prostate cancer is likely to be complex,
results were confirmed by Nadler and co- the few relevant studies published to date
workers, who showed that IL-1β was indicate that SNPs in cytokine genes may
measurable in ~90% of patients with type have a significant impact on disease
III and type IV prostatitis, but rarely development. These results also highlight
detectable in controls (Nadler et al., 2000). the critical need to further elucidate the
The level of TNFα could be measured in impact of cytokines and their sequence
both cases and controls, but levels were variants on prostate cancer susceptibility.
significantly elevated in patients with type
III and type IV prostatitis.
Genetic polymorphisms that alter MIC-1
cytokine gene expression or protein function The type β transforming growth factor
could have an important impact on prostatic (TGF-β) superfamily has more than 40
inflammation and the further development members, which are involved in regulation
of prostate cancer. A polymorphism in the of many cellular functions and biological
promoter of the anti-inflammatory cytokine processes, including proliferation, apoptosis,
IL-10 has been identified; and the IL-10 - extracellular matrix secretion and adhesion,
1082 AA genotype is associated with low terminal differentiation, and development
IL-10 production. In a study by Shoskes et (Derynck et al., 1997).
al., patients with chronic prostatitis were To identify novel molecules that
found to have higher proportions of the participate in the local inflammatory
allele associated with low IL-10 production response, Bootcov et al. subtracted cDNA
compared to controls, indicating a pro- library enriched for genes associated with
inflammatory state in those patients macrophage activation. The following
(reviewed in Pontari M and Ruggieri M screening resulted in the identification of a
(Pontari et al., 2004)). novel transforming growth factor β
Only a few studies have examined the superfamily cytokine, designated
association between prostate cancer risk and macrophage inhibitory cytokine-1 (MIC-1).
sequence variants in cytokine genes such as The MIC-1 gene, located on 19p13, is about
TNFα, IL-8 and IL-10 (McCarron et al., 6 kb long and is composed of two exons.
2002). In the cited study, cytokine sequence The protein is synthesized as a 308 amino
variants (IL-1β-511, IL-8-251, IL-10-1082,
26 Prostate Cancer and Inflammatory Genes
acid long precursor molecule. The at position 7 that has been indicated to be
propeptide is separated from the mature important for the stability of this protein
protein by a furin-like protease acting on a (Fairlie et al., 2001). Due to the differences in
conserved cleavage site at amino acids 193- the properties of these two amino acids, this
196. Following processing, the mature change may alter the stability of the protein
protein of 112-aa is secreted as a disulfide- and thus the function of MIC-1. Some
linked homodimer. The mature protein studies have examined the possible
subunits contain a conserved pattern of relationship between MIC-1 genotypes and
seven cysteine residues, which is a hallmark different diseases, including cancer, with
of the TGF-β superfamily (Bootcov et al., variable results. A study by Brown et al.
1997). Since MIC-1 is a secretory protein it indicated that the presence of the HH
can function in cells secreting it as well as in genotype of MIC-1 was associated with a
their neighbouring cells (i.e. in both decreased risk of metastasis of colorectal
autocrine and paracrine fashions). It has caner at presentation of the disease, but it
been reported that MIC-1 activity (like that should be noted that the numbers of
of TGF-β), requires an intact signalling patients in the investigated groups were
pathway mediated by type I and type II relatively small (Brown et al., 2003).
TGF-β receptors, as well as receptor It has been shown that MIC-1 has
activated Smad4 (Tan et al., 2000). diverse biological functions in distinct
The MIC-1 gene is also known by various cellular contexts. A number of direct and
names, including growth/differentiation indirect lines of evidence suggest there is a
factor-15 (GDF-15) (Böttner et al., 1999), link between MIC-1 and cancer. The
placental bone morphogenetic protein promoter region of this gene contains two
(PLAB) (Hromas et al., 1997; Thomas et al., p53 target sites; and a number of studies
2001), prostate-derived factor (PDF) have demonstrated that MIC-1 is strongly
(Paralkar et al., 1998), and the non-steroidal induced by transactivation of p53 (Kannan et
anti-inflammatory drug-activated gene al., 2000; Li et al., 2000; Tan et al., 2000). A
(NAG-1). Like many TGF-β superfamily well-studied function of p53 is its activity as
cytokines, MIC-1 is expressed very widely, a transcription factor, regulating genes
but under resting conditions the placenta is whose products are involved in a variety of
the only tissue expressing large amounts of cellular processes including growth arrest,
MIC-1 (Fairlie et al., 1999). Small amounts of apoptosis, senescence and genome stability
MIC-1 mRNA have been detected in (Ko et al., 1996). Loss-of-function of DNA
epithelial cells in the kidney, pancreas, colon, target recognition by mutated p53 is an
and prostate as well as macrophages. important step in cell transformation, and
However, in cases of inflammation, injury or over 50% of human cancers contain various
malignancy, MIC-1 expression is inactivated p53 mutants (Hollstein et al.,
dramatically increased. 1994). This indicates that some of the genes
Shortly after cloning of the MIC-1 gene, that are transactivated by p53, including
a polymorphism was identified, resulting MIC-1, may play an important role in the
from alteration of the basic amino acid development of cancers. Furthermore, two
histidine (H), to the acidic amino acid studies by Tan et al. (Tan et al., 2000) and Li
aspartic acid (D), located at position 6 of the et al. (Li et al., 2000) both show that MIC-1
mature MIC-1 protein, next to the cysteine inhibits tumour cell growth through the
Prostate Cancer and Inflammatory Genes 27
cells - including monocytes, macrophages, two repeats) has been associated with a
neutrophils and epithelial cells of many variety of human diseases. Several studies
organs (Arend et al., 1998) – and they bind have shown that people with allele 2 of the
to the same IL-1 receptors. IL-1α and IL-1β VNTR have a more prolonged and severe
are pro-inflammatory cytokines, and their pro-inflammatory immune response than
binding to the receptors initiates a cascade usual, and that carriers of this genotype
of events leading to the recruitment and more efficiently combat microbial infection
activation of macrophages and neutrophils, or colonization (Hu et al., 2005). The
vascular dilation and fever, and a potent pro- majority of studies relating IL-1RN gene
inflammatory immune response (Dinarello, polymorphisms to disease have focused on
1988). When the anti-inflammatory cytokine patients with autoimmune diseases or
IL-1RN binds to the same receptors the disorders associated with chronic
activity of IL-1α/β is blocked. Consequently, inflammation, including inflammatory bowel
the biological function of IL-1α and IL-1β disease, psoriasis, lichen sclerosus, and
cytokines is neutralized in both physiological multiple sclerosis (Witkin et al., 2002). A
and pathophysiological immune and number of studies have evaluated the
inflammatory responses. The relative levels presence of the VNTR in malignant
of IL-1RN, IL-1α and IL-1β at an diseases, and the results have been
inflammatory site determine whether a pro- conflicting rather than conclusive. Studies
inflammatory response will be initiated and from Caucasian populations have shown
persist or will be terminated (McIntyre et al., that homozygous carriage of allele 2 is
1991). Typically, the level of IL-1RN associated with an increased risk of gastric
increases in the later stages of inflammatory cancer (El-Omar et al., 2000; Machado et al.,
events, thereby promoting their termination 2001; Glas et al., 2004), however this
and limiting the risks that inflammation will association was not replicated in Asian
become chronic and cause damage to populations (Wu et al., 2003; Zeng et al.,
healthy cells (Granowitz et al., 1991). The 2003; Chang et al., 2005). In addition to
central role of the IL-1 system is protection gastric cancer, a few studies have evaluated
against many different types of lesion, possible links between VNTR and risks of
ranging from microbial colonisation to other kinds of cancers. Recently, Sehouli et
infection and malignant transformation al. found in a case-control study of 162
(Witkin et al., 2002). women with ovarian cancer and 121
In the second intron of IL1-RN, there is controls that patients who were
a variable number of tandem repeat heterozygous for allele 2 had a significantly
(VNTR), consisting of two to six copies of a higher risk for ovarian cancer (Sehouli et al.,
86-bp sequence (Tarlow et al., 1993). The 2003).
frequency of the individual alleles varies Although the role of genetic variation in
among different ethnic and geographical IL-1RN has been investigated in many types
populations, but allele 1 (containing four of cancers, the role of IL-1RN
repeats) is always the most common allele, polymorphisms in prostate cancer
while the less common allele 2 (containing pathogenesis has not been examined.
Prostate Cancer and Inflammatory Genes 29
Aims
Since 1995 our research group has been and the mean age of diagnosis was 67 years.
identifying (mainly on the basis of referrals Nearly two-thirds of the cases were
from urologists and oncologists) and diagnosed before PSA measurement was
collecting information on Swedish families introduced as a diagnostic tool in Sweden.
with a history of HPC. In the analysis of the The majority of the cases (79%) had clinical
Macrophage Scavenger Receptor I gene we symptoms at diagnosis and 60% of the cases
examined material from 83 of these families. were diagnosed with advanced or metastatic
The 83 families included in this study disease.
had an average of 4.5 affected men/family
Patients with prostate cancer and controls (Studies I, II, III, IV)
case participants, diagnosed for prostate additional questionnaires and record linkage
cancer between January 2001 and September to the Swedish Cancer Registry or medical
2002, were recruited from four of the six records. The families were subsequently
regional cancer registries that cover the classified as hereditary prostate cancer
entire population of Sweden. Each of these families, where three or more relatives had
registries serves one health care region prostate cancer (52 cases), or familial
(Northern, Central, Stockholm, and South prostate cancer families: where two relatives
Eastern) and they collectively encompass had prostate cancer (130 cases). In total
approximately 6 million inhabitants (67% of 1961 prostate cancer cases were invited for
Sweden’s population). The source-person- participation in the CAPS study, of those
time was divided into two age–specific study 1444 (73.6%) approved to participate by
groups. The first group included men 35-65 donating a blood sample and answering the
years of age, living in all regions mentioned questionnaire. At the time of the studies in
above. The second study base included men this thesis DNA was available for 1383 of
66-79 years of age at the time of the study the cases who accepted to participate.
entry, living only in the central and northern Control subjects were randomly selected
region. Swedish law requires both the from the continuously updated Swedish
attending physician and pathologist to report Population Registry, frequency matched
newly diagnosed cancer cases to the cancer according to the expected age distribution
registries. Therefore, the registries include (within five years), geographic origin of the
records of almost 100% of all cancers cases and sex. Of the 1697 randomly
diagnosed in Sweden. The cases were linked selected controls that were invited for
to the National Prostate Cancer Registry and participation in the study, 866 (52.0%)
clinical information on aspects such as TNM accepted to participate with blood donation
(tumour-node-metastasis) stage, Gleason and questionnaire. At the time of the studies
sum, PSA level at the time of diagnosis, in this thesis DNA was available for 780 of
methods of diagnosis and primary treatment the controls that approved to participate.
were obtained for 95.3% of the cases. The Mean age (age at diagnosis for case patients
cases were then classified as either and age at inclusion for control subjects) for
Localised (T1-2, N0/NX, M0/MX, Grade the cases and controls were 66.6 and 67.9
I-II/Gleason sum 2-7, and PSA<100) or years, respectively. Blood (4 x 10 ml) was
Advanced (having or being prone to collected from all cases and controls and
progressive disease; T3/4 or N+ or M+ or separated into serum, plasma, and buffy
Grade III or Gleason sum 8-10 or coat. A detailed description of the study
PSA>100). For cases where at least one sample is presented in Study III. Clinical
reported family member with prostate characteristics of the prostate cancer cases in
cancer a more detailed family history of the study are summarized in Table 1.
prostate cancer was obtained through
32 Prostate Cancer and Inflammatory Genes
Table 1. Clinical characteristics of the 1383 cases with prostate cancer included in
the CAPS study.
Age
45-65 (n=704) 66-80 (n=679)
Number (%) Number (%)
T-stage
T0 3 (0.4) 3 (0.4)
T1 259 (36.8) 200 (29.5)
T2 234 (33.2) 208 (30.6)
T3 144 (20.5) 207 (30.5)
T4 20 (2.8) 28 (4.1)
TX 44 (6.3) 33 (4.9)
N-stage
N0 157 (22.3) 66 (9.7)
N1 26 (3.7) 19 (2.8)
NX 521 (74.0) 594 (87.5)
M-stage
M0 328 (46.6) 250 (3.8)
M1 67 (9.5) 64 (9.4)
MX 309 (43.9) 365 (53.8)
Gleason score
<=4 29 (4.1) 24 (3.5)
5 79 (11.2) 63 (9.3)
6 236 (33.5) 185 (27.2)
7 177 (25.1) 188 (27.7)
8 53 (7.5) 70 (10.3)
9 40 (5.7) 37 (5.4)
10 7 (1.0) 3 (0.4)
Missing 83 (11.8) 109 (16.1)
Tumour grade
GI 35 (5.0) 34 (5.0)
GII 154 (21.9) 151 (22.2)
GIII 70 (9.9) 72 (10.6)
GX 445 (63.2) 422 (62.2)
PSA levels
<4 49 (7.0) 26 (3.8)
4-9.99 264 (37.5) 169 (24.9)
10-19.99 139 (19.7) 152 (22.4)
20-49.99 92 (13.1) 128 (18.9)
50-99.99 49 (7.0) 77 (11.3)
>=100 64 (9.1) 87 (12.8)
Missing 47 (6.7) 40 (5.9)
Prostate Cancer and Inflammatory Genes 33
Genetic analysis
Genomic PCR (Studies I and II) column is proportional to the number of ion
pairs formed between the negatively charged
For the mutation screening in Study I and nucleic acids and the positively charged
genotyping of the VNTR in IL1-RN (Study TEAA ions absorbed to the stationary
II), intron complementary primer pairs that phase.
could amplify all exons, exon-intron The second step is elution of the nucleic
junctions, the promoter region, and 3´-UTR acids bound to the column using a linear
in the MSR1 and the VNTR in IL-1RN were gradient of Acetonitrile, which weakens the
used for amplification from genomic DNA. bonding between the column and TEAA by
competive hydrophobic interactions and
thus releases the nucleic acids. The helical
Mutation screening (Study I) nature of the duplex is disrupted in the
heteroduplexes due to the presence of
incorrect base pairing at the site of the
The analysis of the MSR-1 gene was started
mutation, which reduces the number of ion-
by screening the entire coding sequence -
pairing bonds with the column and thus
including exon-intron junctions, promoter
results in the heteroduplex eluting earlier (at
regions and 5´- and 3´-untranslated regions -
a lower acetonitrile concentration) than the
for mutations by Temperature Modulated
homoduplex (Figure 2). This approach to
Heteroduplex Analysis (TMHA) using High
detecting heteroduplexes is most suitable
Performance Liquid Chromatography
when screening for rare mutations and
(HPLC) and a DNA-binding column
mutations, for which homozygotes of the
(DNAsepTM). This technique is based on the
rare allele are unlikely to be present. Since
principle that heteroduplexes formed
this was our aim, we did not modify the
between mutated DNA and normal DNA
method to enable common polymorphisms
molecules can be distinguished from
(for which homozygotes of both alleles are
homoduplexes consisting entirely of normal
likely to present in the study population) to
DNA molecules, by a differences in their
be detected. A detailed description of the
elution profiles at a given optimized
method is presented elsewhere (Xiao et al.,
temperature. The experimental procedure
2001).
includes two main steps:
The sequence variants identified using
First, the nucleic acids of interest (for
the HPLC analyses were confirmed by direct
example PCR-products) are denatured at
sequencing. The amplicon of interest was
95°C for 5 minutes, then gradually
amplified from corresponding genomic
reannealed by reducing the temperature to
DNA. PCR products were purified and then
20°C over 50 minutes, a process that enables
sequenced with a dye terminator kit. To
formation of mismatched DNA
ensure high sequence quality, all fragments
(heteroduplexes). The samples are
were sequenced from both directions.
subsequently bound to the column using
Primers used for amplification of the PCR
trietylammonium acetate (TEAA). The
product were used as sequencing primers.
binding strength of nucleic acids to the
34 Prostate Cancer and Inflammatory Genes
Wild
Mutant Heteroduplexes Homoduplexes
type
Wild type Homoduplexes
heat heat
cool cool
AT AT AT GC A C G T A T GC
10
3
9
Intensity (mV)
Intensity (mV)
8
7
2
6
5
4
3 1
2
1
0
0
0
Retention
2
time
4
(min)6 8 -0,2 0,8
The DNA samples were labelled blindly and assays were designed using the Assay-by-
shipped from Umeå University, Sweden, to Design service (Applied Biosystems Inc.,
the core genotyping laboratory in the Center Foster City, CA) and the samples were
for Human Genomics, Wake Forest analyzed using an ABI 7700 sequence
University, USA. In total, 37 controls from detection system. Since it was not possible
the CEPH foundation (1331-01, 1331-02), to design a 5’ nuclease assay for the 86-bp
and 29 blind repeats were spread among the VNTR in intron 2, it was genotyped by
DNA samples. In addition, every DNA plate temperature modulated heteroduplex
contained two water blanks. analysis using a High Performance Liquid
Chromatography system, performed as
described above (Study I). Haplotypes of
Association of Interleukin-1 receptor these SNPs were estimated using a Markov
antagonist haplotype with prostate Chain Monte Carlo approach as
cancer risk (Study II) implemented in the PHASE software
package
The procedure described above for selecting (http://www.stats.ox.ac.uk/mathgen/softwa
MIC-1 sequence variants for analysis was re.html). Haplotype-tagging SNPs, which
also used to select SNPs of the IL1-RN captured at least 95% of the haplotype
gene. In total, 16 SNPs and two repeats (the variation among the 94 controls, were
86-bp VNTR and an 8-bp repeat) were selected using the htSNP2 computer
identified by scrutinizing public databases program (www-
(NCBI dbSNP, and SNPper) (Figure 3). gene.cimr.cam.ac.uk/clayton/software/stat).
Three different methods were used for Four htSNPs were identified and they were
genotyping. genotyped in all 1383 cases and 779
First, the 16 identified SNPs and the 8- controls. The htSNPs (rs878972, rs315934,
bp repeat were genotyped in 94 control rs3087263, rs315951) were then genotyped
subjects using a 5’ nuclease assay with using the MassARRAY system
TaqMan MGB probes. The SNP genotyping (SEQUENOM, Inc. Valencia, CA).
Prostate Cancer and Inflammatory Genes 37
1 kb
MIC-1
-893 T/C
1809 G/T
-1576 A/G
V9L 25 C/G
904 A/G
2816 C/G
2423 C/G
1809 G/T
142 A/T
25 C/G
Haplotype-tagging
SNPs (htSNPs)
1 kb
IL1-RN
8599C/T
3701A/G
6429-/+
-1129C/T
1631G/A
9726A/G
10173G/A
8111G/A
15818A/G
12985C/T
11864A/C
13875T/G
14992G/C
2118C/A
-12C/G
4696C/G
5351T/C
618A/C
10909A/G
8111G/A
10173G/A
14992G/C
2118C/A
Haplotype-tagging
SNPs (htSNPs)
Statistical analysis
sets found to be as probable as, or less Haplotype analysis (Studies II, III)
probable than, the observed data set, as
implemented in the software package Tests of association between haplotypes and
Genetic Data Analysis (GDA). prostate cancer risk were performed using a
score test developed by Schaid et al. (Schaid
et al., 2002), as implemented in the software
Association analysis (Studies I, II, HAPLO.STAT for the R programming
III, IV) language. This method, based on the
generalized linear model framework, allows
Associations between genotypes/MIC-1 adjustment for possible confounding
serum and prostate cancer risk were assessed variables and provides both global and
by the score tests in conditional logistic haplotype-specific tests. In these analyses,
regression of a covariate equal to the age and geographic region were adjusted for
number of rare alleles (0, 1, 2) (Studies II using indicator variables representing each
and III) and by dichotomized MIC-1 serum combination of age category (5-year age
levels (with a cut-off value of 1000 pg/ml, groups) and geographical region was
based on the median level among unaffected adjusted as described earlier. Haplotypes
controls) (study IV). Genotype specific risks with estimated frequencies less than 0.005
were estimated as Odds Ratios (OR) with were pooled into a single group. Empirical
associated 95% confidence intervals by P-values, based on 10,000 simulations, were
conditional logistic regression. Both when computed for the global score test and each
testing for association and estimating ORs, of the haplotype-specific score tests.
the conditional logistic regression was
stratified by each combination of age (5-year
age groups) and geographical region (the Assessment of serum levels (Study
northern part of Sweden vs. the south IV)
eastern part of Sweden and the Stockholm
area) to adjust for the matching conducted Serum MIC-1 levels of prostate cancer cases
in collecting control subjects. Besides age and controls were presented as means +/-
and geographical region, no other factors standard deviation (SD). Formal comparison
were included in the regression analysis. In of MIC-1 levels between different subject
Study I unconditional logistic regression was groups were conducted using analysis of
used to test for association between variance (ANOVA) methods. To evaluate
genotypes and affection status. We adjusted the diagnostic value of MIC-1 serum levels,
for age and geographical region using nonparametric receiver operating
indicator variables representing each characteristic (ROC) analysis was performed.
combination of age of onset (5-year age
groups) and geographical region.
40 Prostate Cancer and Inflammatory Genes
In order to evaluate the role of MSR1 gene In agreement with our findings, R293X
mutations in prostate cancer in the Swedish mutation was observed in the same
population we carried out a genetic analysis frequency (3.2%) among Caucasian HPC
in a large number of subjects from two families in the study from the United States,
different study populations in Sweden. We (Xu et al., 2002). In addition, Seppälä et al.
initially screened a set of DNA samples reported the same frequency (2.5%) among
representing one affected individual from 120 families affected with HPC (Seppälä et
each of 83 Swedish families affected by al., 2003), as well as Wang et al. among 163
HPC. Among these individuals we identified families affected with familial prostate
18 sequence variants in total, including two cancer (3.1%) (Wang et al., 2003) (Table 2).
exonic variants, four intronic and nine
variants located in the 5’- or 3’-uncoding We further evaluated the association
regions. A nonsense mutation at codon 293 between this mutation and prostate cancer
(R293X) and five common sequence by screening a group of 215 unrelated men
variants (PRO3, INDEL1, IVS5-57, P275, with prostate cancer and 425 age-matched
INDEL7) identified in this study, were also controls. The R293X mutation was found
reported by Xu et al (Xu et al., 2002). more frequently in men with prostate cancer
The truncating mutation R293X results (10 individuals, 4.9%) than their matched
in a deletion of most of the collagen-like controls (10 individuals, 2.7%), however this
domain, including the ligand-binding region difference was not statistically significant
and the cysteine-rich domain. Experimental (P=0.16) (Table 2). In contrast, Xu et al.
studies have demonstrated that an MSR1 reported a significant difference in
mutant harbouring a similar truncating frequencies of the R293X mutation between
mutation to R293X has a dominant-negative men with non-HPC and unaffected men
phenotype when expressed in vitro (Dejager (2.5% versus 0.39%, P=0.047) (Xu et al.,
et al., 1993). R293X was found in two 2002). The choice of control population
probands from two different families among might explain some of the differences
the 83 HPC families (2.4%). One family had between our results and the previous report.
one affected (the proband) and three The men in the control population in the
unaffected R293X carriers, while the other present study were on average 66 years old
family had one affected (the proband) and at recruitment, an age at which only 15% of
two unaffected R293X carriers. However, all prostate cancers have been diagnosed.
due to the low numbers of affected men in Thus, some of the unaffected R293X
these two families, it was not possible to carriers are likely to develop prostate cancer
determine whether the mutation segregated eventually. Another difference is that Xu et
with the disease. al. only included men with PSA values <4
and a normal prostate examination.
Prostate Cancer and Inflammatory Genes 41
Table 2. Reported studies of the association between the MSR1 nonsense
mutation R293X and prostate cancer risk
No. of carriers/total (frequency )
Two other studies that investigated the mutations located in similar positions to
possible association between the R293X IVS3-4 and IVS4+3 can lead to exon
mutation and prostate cancer did not find skipping, intron retention or insertions and
any statistically significant difference deletions due to utilization of cryptic splice
between unselected prostate cancer cases sites (Margaglione et al., 2000; Attanasio et
and controls (Seppälä et al., 2003; Wang et al., 2001, 2003). Further functional studies
al., 2003) (Table 2). If the R293X mutation are needed to assess the functional
increases the risk for prostate cancer by a significance, if any, of these mutations.
factor of two and the frequency is ~3% in Besides the three rare mutations
the general population, as our results described above, we decided to elucidate the
suggest, a much larger case-control study importance of five common sequence
would be needed to significantly verify this. variants found in the mutation screening of
In addition, we detected two novel MSR1: an SNP in the promoter region
potential pathogenic mutations, IVS3-4 (PRO3), a 15-bp insertion/deletion of
A>G and IVS4+3 A>G, respectively “GAATGCTTTATTGTA” in intron 1
located in the splice donor region and splice (INDEL1), an SNP in intron 5 (IVS5-57), a
site acceptor region of exon 4. Both of these SNP in Exon 6 (P275A), and a 3-bp
mutations were observed in single families, insertion/deletion of “TTA” in intron 7
and neither of them was detected when (INDEL7). The initial study evaluating the
screening the group of unselected men with role of the five sequence variants in the
prostate cancer or age-matched healthy MSR1 gene, reported a significant difference
controls. Point mutations which alter a in the allele frequencies of each of the five
conserved sequence in the splice donor variants between patients with non-HPC
region, the splice acceptor region or a region and unaffected control subjects, which led
nearby may cause aberrant splicing of a to the suggestion that these common MSR1
gene. Several studies have shown that variants are associated with prostate cancer
42 Prostate Cancer and Inflammatory Genes
risk in the general population (Xu et al., patients with prostate cancer and 425 age–
2003). To investigate whether these variants matched controls. None of the variants were
are associated with prostate cancer risk we found to be associated with prostate cancer
decided to genotype them in 215 unrelated (Table 3).
Two other studies have evaluated the macrophages by oxidative stress and may
common sequence variant in exon 6 (P275) modify the amounts of reactive oxygen
for its role in prostate cancer risk in the intermediates. The inflammation and
general population. Carrier frequencies of proliferative regeneration of prostate
the P275A variant were compared between epithelium in the presence of increased
unselected prostate cancer cases and oxidative stress that are associated with
controls. Their data are consistent with our MSR1 expression may have a role in the
results because they found no statistically development of prostate cancer (Xu et al.,
significant difference in the carrier 2002).
frequencies between the different sample In conclusion, we found no evidence to
groups (Seppälä et al., 2003; Wang et al., support the hypothesis that the sequence
2003). variants in the MSR1 gene play a role in the
It is not known how MSR1 could development of hereditary or sporadic
contribute to the development of prostate prostate cancer.
cancer. However, MSR1 is induced in
Prostate Cancer and Inflammatory Genes 43
Several studies have shown that IL1-RN acts to be less sensitive to departure from HWE
as an important regulator of the than the asymptotically distributed score
inflammatory response by inhibiting the statistic.
action of IL-1α and IL-1β. Since chronic The SNP analysis showed that there were
inflammation in the prostate appears to be a no significant differences in proportions of
co-factor in the pathogenesis of prostate any of the four htSNPs between the controls
cancer, we hypothesized that functional and prostate cancer cases. Assuming that the
polymorphisms in inflammation-related SNPs had a dominant or recessive allelic
genes, such as IL-1RN may be associated effect on prostate cancer risk did not alter
with prostate cancer risk. To test this these findings. Furthermore, stratified
hypothesis, we performed genotype analyses analyses based on age (<65 or ³65), tumour
for four IL1-RN gene polymorphisms in a stage (localized or locally advanced) and
large population-based case-control study of family history (sporadic or
1383 prostate cancer case patients and 779 familial/hereditary) detected no significant
control subjects. differences in genotype frequencies between
Quality control of the genotype results cases and controls.
(based on included CEPH controls, repeated We also performed a haplotype analysis
study samples and water blanks) provided an of the four htSNPs, which identified the
estimated error rate of 0%. Except for the presence of eight major haplotypes. Global
SNP rs315951, which significantly deviated tests for association between haplotypes and
from HWE in cases (P=0.04), but not prostate cancer risk all yielded non-
controls (P=0.34), the genotype data for the significant results. However, individual
remaining three SNPs were consistent with haplotype analyses revealed that one
HWE (all P>0.05). The significant deviation haplotype was statistically significantly
of the genotype frequencies of SNP associated with prostate cancer risk (Table
rs315951 from expected proportions among 4). The frequency of the ATGC haplotype
the prostate cancer subjects may be a result of SNPs rs878972, rs315934, rs3087263, and
of genotyping errors, population rs315951 was significantly higher among
stratification, selection, or statistical cases (38.7%) compared to controls (33.5%)
fluctuations. However, given the high quality (haplotype-specific P=0.009). Furthermore,
of the genotyping results and the ethnic in the stratified analysis the frequency of the
homogeneity of the Swedish population, it “ATGC” haplotype was higher in sporadic
seems most plausible that chance alone was (39.3%) than in familial (34.8%) prostate
responsible for the observed departure from cancer cases. Likewise, cases with advanced
HWE. Since the departure from HWE was disease had a higher prevalence (40.0%) than
in the direction of excessive homozygosity, patients with localised disease (37.5%). The
the error in haplotype estimations (based on fact that the association was strengthened in
the EM algorithm) was not increased (Fallin cases with advanced disease is particularly
et al., 2000). Moreover, all statistical noteworthy. While it is important to identify
inferences regarding haplotypes were based disease susceptibility genes, it is equally or
on simulated P-values, which are expected
44 Prostate Cancer and Inflammatory Genes
probably even more important to identify that only alter protein function significantly
genes that play roles in disease progression, when they occur together. Second, the
especially for prostate cancer since the ATGC-haplotype may be in strong linkage
disease has a late average age of onset and is disequilibrium (LD) with a risk-conferring
life threatening in a relatively small sequence variant in IL1-RN, or in close
proportion of cases (aggressive cases). vicinity to the gene, while the degree of LD
Polymorphisms in genes mediating between this risk-conferring sequence
progression of prostate cancer could variant and each of the four htSNPs is much
function as genetic markers predicting an weaker.
increased risk of progressive disease. In this study the overall haplotype test
The observation that the most common gave a non-significant result, while the
haplotype was associated with prostate haplotype-specific score was significant for
cancer risk but none of the individual the most common haplotype. However, the
htSNPs, highlights the advantages of estimated odds ratios show significantly
studying all variations in a gene with the use increased risk only for homozygous carriers
of a haplotype-tagging approach instead of (OR = 1.6; 95% CI, 1.2-2.2) of the “ATGC”
testing a limited number of single variants. haplotype and not for heterozygous carriers
Two different scenarios may explain this (OR = 1.0: 95% CI, 0.8-1.2). Since the
observation. First, the association may be a proportion of individuals that are
result of two or more sequence variants in homozygous for this haplotype is
the region that do not individually confer a considerably lower than the overall
detectably increased risk for prostate cancer, frequency of the haplotype, the power of the
but do confer a statistically significant risk in global test will be considerably lower than if
combination, which can be detected using heterozygous carriers were also at increased
the haplotype-association strategy. For risk.
example, there may be two SNPs in the gene
Table 4. Estimated haplotype frequencies in the IL1-RN gene in controls, patients with sporadic prostate cancer (SPC) and
45
rs315934
rs315951
C T G C 17.5 15.3 -1.16 0.234 15.2 -1.22 0.208 14.1 -1.78 0.080
A C G G 14.3 13.6 -0.58 0.560 14.0 -0.41 0.667 14.9 0.45 0.655
C T A C 8.4 7.7 -0.80 0.428 7.9 -0.64 0.513 8.4 -0.20 0.839
A C G C 5.8 5.4 -0.38 0.713 4.9 -0.89 0.367 4.8 -0.86 0.401
C T G G 1.8 2.7 0.97 0.337 2.9 1.06 0.274 2.4 0.17 0.872
C T A G 0.6 0.7 0.33 0.737 0 0
Overall 0.116 0.052 0.024
*
Score test statistics for association between haplotype and prostate cancer risk.
†
Empirical P values based on 10,000 replications.
46 Prostate Cancer and Inflammatory Genes
Several studies have evaluated the role of characteristics, raises the possibility that an
IL-1RN in a number of malignancies by association between a haplotype in IL-1RN
investigating the frequency of the 86-bp and prostate cancer may in fact be due to an
VNTR in various study populations. association between another gene or genes
However, since the VNTR only covers a in the cluster and prostate cancer.
minor part of the variance in the gene, it is Knowledge of the degree of LD across this
not enough to solely analyze the repeat to region is vital to our understanding of the
evaluate the role of IL-1RN. Therefore, we combinations of genotypes that are
used another approach, in which we studied important in disease. Several analyses have
a set of tagging SNPs that captured almost been performed to determine the degree of
all the genetic information in the entire gene. LD across this region, all of which have
We genotyped four htSNPs in the study found moderate LD in this gene cluster that
population, which explained >98% of is not strictly correlated with distances
diversity in the gene. The VNTR was not between markers (Cox et al., 1998; Bensen et
included in the genotyping, but it was almost al., 2003). Thus, additional SNPs in this
equivalent to the htSNP rs878972 (Pearson region need to be identified and analysed to
correlation coefficient = 0.99). The htSNP determine whether apparent associations
rs878072 was not associated with prostate between IL-1RN and prostate cancer reflect
cancer risk, thus it is unlikely that the VNTR a causative relationship, or are due to the
in intron 2 by itself contributes significantly effects of another gene in the cluster.
to prostate cancer risk. Our results suggest that (a) prostate
The IL-1RN gene belongs to the IL-1 cancer risk variant(s) may be located
gene cluster, which spans a 360-kb region of somewhere in the region of IL1-RN. The
chromosome 2 (Steinkasserer et al., 1992). exact location and biological function of
This cluster of genes contains several pro- this/these sequence variant/variants remain
and anti-inflammatory cytokine genes that to be identified. Further studies are needed
are expressed in both physiological and to replicate our findings in other populations
pathological conditions and play a key role and to elucidate the biological function of
in the inflammatory immune response. The the IL-1RN haplotype in relation to prostate
high density of IL-1 genes in this region, cancer risk.
which share similar functional
haplotype variation in the gene, and each of mechanisms involved remain unclear. The
them were in HWE among both cases and substituted amino acid at position six is
controls (all P>0.05). These SNPs were in located adjacent to the cysteine at position
strong LD, as most of the pair-wise D’ seven, which has been indicated to be
estimates were 1.0, with the lowest at 0.94. important for the stability of MIC-1 (Fairlie
Testing for genotype frequency et al., 2001). Because of the different
differences between cases and controls biochemical properties of aspartic acid and
revealed one SNP (H6D) for which there histidine, the H6D polymorphism may alter
was a significant difference between cases MIC-1’s stability and function. If it abolishes
and controls (P=0.006); proportions of or reduces MIC-1 activity, inflammation in
homozygotes for the common CC genotype the prostate may go unchecked in carriers
encoding the wild-type protein being higher with the risk genotype, leading to an
among prostate cancer cases than among increased risk for tumour development. On
controls (53.0% versus 48.5%). In an the other hand, expression of a MIC-1
assessment of genotype-specific risk we protein with increased activity or stability
found that the OR for carriers of the GC or may lead to a reduced pro-inflammatory
GG genotype, which encodes the H6D response, which in turn could reduce the
mutant, was lower than the OR for the CC capacity to eradicate certain pathogens
genotype carriers (OR=0.83; 95% CI, 0.69- effectively. This is in line with the infectious
0.99). The decreased risk for carriers of the aetiology of prostate cancer that has been
GC or GG genotype compared with that of proposed (Dennis et al., 2002a).
the CC genotype carriers was further Furthermore, altered functionality of MIC-1
accentuated both in patients with advanced due to the H6D polymorphism may also
disease (OR=0.79; 95% CI, 0.63-0.99) and in lead to decreased tumour cell growth
patients with a positive family history of inhibition mediated through the TGF-β
prostate cancer (OR=0.68; 95% CI, 0.48- signalling pathway. Other types of
0.96) (Table 5). The observation that the investigations, such as in vitro and in vivo
association was further strengthened in functional studies of the H6D variant, are
patients with a positive family history is needed to address these possibilities.
consistent with the hypothesis that risk In conclusion, this is the first published
genotypes may co-segregate with unknown study evaluating the possible association
gene alterations with low penetrance within between sequence variants in the MIC-1
families. In summary, the findings that an gene and prostate cancer risk. Our study
association between the H6D variant and provided evidence for such an association,
prostate cancer is present in sporadic cases but more studies are needed to confirm or
and further accentuated in familial cases are refute this finding in independent
consistent with current knowledge. populations and to elucidate the mechanism
Although this study provided strong whereby the H6D sequence variant affects
evidence for an association between the the expression and function of MIC-1 in the
H6D sequence variant in the MIC-1 gene signalling pathways that seem to control
and prostate cancer, the underlying macrophage regulation and tumour growth.
48 Prostate Cancer and Inflammatory Genes
Table 5. Association between prostate cancer and the H6D sequence variant of the MIC-1
gene in a large population-based study (CAPS).
OR* (95% CI)
Study subset No. of GC vs. CC GG vs. CC GC or GG vs. CC
subjects
All PC 1340 0.77 (0.64, 0.93) 1.22 (0.84, 1.75) 0.83 (0.69, 0.99)
Advanced PC 0.75 (0.59, 0.95) 1.11 (0.70, 1.74) 0.79 (0.63, 0.99)
FPC and 159 0.61 (0.42, 0.89) 1.18 (0.61, 2.29) 0.68 (0.48, 0.96)
HPC†
Advanced PC 57 0.44 (0.24, 0.81) 0.62 (0.18, 2.05) 0.47 (0.26, 0.82)
*Conditional logistic regression stratified by age and geographical region.
†FPC= Familial Prostate Cancer, HPC= Hereditary Prostate Cancer.
groups. The reason for the relationship but may be related to an increased general
between age and serum MIC-1 levels found inflammation burden.
among the controls in this study is unclear,
3000
2500
2000
MIC-1 (pg/ml)
1500
1000
500
0
<60 60-64 65-69 70-74 75-79
The mean serum MIC-1 level among all (watchful waiting, hormonal treatment,
prostate cancer patients analysed was 1357 radical prostatectomy and radiotherapy) they
pg/ml, SD=1534, which was significantly received. For 43 patients, treatment was not
higher (P= 0.004) than the MIC-1 level specified so these patients could not be
among the control subjects (1190 pg/ml, classified. Significant differences in serum
SD=942) (Table 6) In addition, MIC-1 levels MIC-1 level between the different treatment
were significantly higher (P<0.001) among options were observed (P<0.001). However,
patients with advanced disease than among multiple ANOVA analyses of MIC-1 levels
patients with localised prostate cancer, with age, disease stage and treatment as
(mean 1666 pg/ml, SD=2138 and 1121 independent factors revealed significant
pg/ml, SD=733, respectively (Table 6). The effects of age and disease stage, while no
prostate cancer group was further divided significant effect was observed for
into subgroups depending on the treatment treatment.
50 Prostate Cancer and Inflammatory Genes
Table 6. Serum MIC-1 level of all prostate cancer patients and controls according to
stage and treatment
Status n Mean ± S.D P-value*
To further refine the correlation between relationship between MIC-1 serum level and
serum MIC-1 levels and disease stage, the tumour burden. These data are consistent
prostate cancer group was stratified based with previous reports that patients with
on the TNM classification. The stratified metastatic cancer had significantly elevated
analysis revealed a significant increase in serum MIC-1 levels compared with other
serum MIC-1 levels with increasing TNM- cancer patients (Brown et al., 2003).
stage (P<0.001, age adjusted)(Figure 5). The However, if the elevation is a secondary
same trend was observed when only effect of the tumour growth or wether MIC-
untreated cases (n=245) were included in the 1 palys an active role in the disease
analysis (P=0.029) (data not shown), clearly progression, where an increase in serum
indicating that this phenomenon is not concentration enhances tumous growth, is
related to treatment effects. All together still needed to be investigated.
these results clearly demonstrate a
Prostate Cancer and Inflammatory Genes 51
4000
3500
3000
MIC-1 (pg/ml)
2500
2000
1500
1000
500
0
I II III IV
1.0
0.8
0.6
Sensitivity
0.4
0.2
0.0
Finally, to test for possible association the H allele and thereby alter the risk for
between MIC-1 genotype and serum levels, prostate cancer development.
we compared serum levels between control Another important question needed to
subjects with different genotypes according be answered, but that is beyond the result
to the H6D polymorphism. No significant from this study, involves the role that MIC-1
differences in MIC-1 serum levels between may play in the development of prostate
the genotypes was observed (P=0.41) cancer. The increase in serum MIC-1 level
(Figure 7). We therefore suggest that the associated with the presence of prostate
H6D polymorphism may alter the function cancer implies that an inflammatory process
or stability may of the protein, for example in the prostate may be involved in the
the D allele may be more biologically active development or progression of prostate
or function in a different way compared to cancer, since in vitro studies have shown that
MIC-1 may function as a suppressor of
Prostate Cancer and Inflammatory Genes 53
3000
2500
2000
MIC-1 (pg/ml)
1500
1000
500
0
CC CG GG
H6D genotype
Figure 7. Correlation between MIC-1 genotypes and serum level in 620 controls without
prostate cancer. No significant difference in MIC-1 serum levels among control subjects
with different genotypes was observed (P=0.41).
54 Prostate Cancer and Inflammatory Genes
Discussion
Association studies
Association studies offer a potentially harbour tumours in the prostate by the time
powerful approach to identify genetic they are 60 years old, which means that a
variants that influence susceptibility to larger proportion of men die with prostate
complex diseases, but are afflicted by the cancer rather than from it (Sakr et al., 1994).
impression that they are not consistently This makes it difficult to find case-control
reproducible. Nevertheless, a number of populations where cases and controls differ
complex diseases have been consistently significantly in the phenotype of interest,
shown to be associated with specific genetic thus reducing the probability of detecting
variants, including thrombophilia, cancer-associated factors.
Alzheimer’s disease, and diabetes types 1 Another problem that arises when
and type 2 (Hattersley et al., 2005). The performing association studies of prostate
susceptibility variants identified to date cancer, as well as other complex diseases, is
either common, and carry a modest risk, or the heterogeneous nature of these diseases.
uncommon and carry a substantial relative Prostate cancer patients may be predisposed
risk. However, few of the many possible to the condition, due to the inheritance of
associations investigated in published different sequence variants of the same or
cancer-genetic association studies have been different genes from different founders.
subsequently established beyond reasonable This causes two major problems. First,
doubt (Pharoah et al., 2004). In other cases, inherited susceptibility could vary
the results of further investigations have significantly among ethnic groups. Second,
generally been conflicting, for several different distributions of ethnicity among
possible reasons, including population cases and controls could lead to population
stratification, small sample sizes, and stratification, so observed differences in
misclassification of study subjects. genotype frequencies of a variant may
One of the major factors hindering partially reflect differences in the genetic
association studies of prostate cancer are background of cases and controls. However,
that prostate cancer is often detected by if cases and controls are well matched,
PSA measurements in cases where there are differences in the frequency of genotypes
no clinically distinguishing features. A should only be seen at predisposition loci.
further complication is that the presence of A further substantial problem is that a
prostate cancer is also frequently undetected large number of genes and genetic variants
among controls, partly due to the fact that may affect the risk for prostate cancer
prostate cancer is commonly a late age of through different mechanisms, and the
onset disease, and there are often long effect of each given gene, or variant of a
periods in which it is present but there are gene, is likely to be minor in the general
no obvious symptoms. Evidence from population. Such polygenic effects could
autopsies indicate that over 50% of men apply even in a homogenous population.
56 Prostate Cancer and Inflammatory Genes
exclude the possibility that there may be control study that recruited subjects from
another important variant in the same gene. 70% of the Swedish population. The genetic
By using the tagging SNP approach, in background of the Swedish population is
which the variance in the entire gene is homogenous, which significantly reduces the
evaluated, it is easier to obtain evidence that risk for population stratification. In addition,
could exclude the possibility that a candidate the population-based study was carefully
gene plays a role in prostate cancer designed, and almost all patients who met
pathogenesis (Pharoah et al., 2004). the inclusion criteria enrolled in the study.
Control subjects were frequently matched to
We have performed association studies to case subjects on the basis of residence area,
evaluate the role of sequence variants in sex and age. Further, the full clinical
three different genes in prostate cancer spectrum of prostate cancer was well
susceptibility, and have therefore taken into represented, with over 45% of cases having
account the issues described above. The advanced disease. The large number of study
criteria needed to perform a well-designed subjects increases the statistical power to
association study have been fulfilled with detect a modestly altered risk for prostate
varying degrees in the three studies. cancer. However, it should be noted that the
In study I, we used a homogenous statistical power to detect a risk genotype for
population with minimal risks for an allele present at low frequencies is still
population stratification drawn from the limited unless the study is very large. For
NSHDC. Each case had two controls example, to have 80% power to detect a risk
matched in terms of sex, age, date at genotype that confers an OR of 1.4 (at a 5%
recruitment and geographical residency. significance level according to two-sided
However, the NSHDC case-control study tests), the risk genotype need to be present
sample is too small to detect modest genetic in 5% of the population. If the risk genotype
risks (OR 1.5-2.0) such as those expected for only confers an OR of 1.2, it needs to be
the five common sequence variants present in 20% of the population to have
evaluated (PRO3, INDEL1, IVS5-57, 80% power to detect the genotype (Figure
P275A, INDEL7). For instance, to evaluate 8). Finally, a careful quality control was
convincingly the effects of the rare mutation implemented in the genotyping procedure
R293X, which is present at a frequency of by including both cases and controls
3% in the general population, according to (including CEPH samples, blinded repeats
our observations, and increases prostate and water blanks on the same DNA plates).
cancer risk by a factor of two (OR ~2.0), a No indication of genotyping error was
much larger case-control study would be observed in Studies II and III, the genotype
needed. consistency was 100% for the CEPH
In Studies II and III we used 780 control DNA samples, and results from
controls and 1383 cases drawn from the duplicated samples were 100% concordant,
CAPS study, a population-based case- giving an estimated error rate of 0%.
58 Prostate Cancer and Inflammatory Genes
1.0
MAF = 5%
0.9 MAF = 10%
MAF = 20%
0.8
0.7
0.6
Power
0.5
0.4
0.3
0.2
0.1
0.0
Figure 8. Graph illustrating the dependence of the power to detect a risk genotype on
minor allele frequency (MAF), at a significance level of 5% according to two-sided tests.
In 1863, Virchow first suggested that cancer between the effects of pro-inflammatory and
originates at sites of chronic inflammation anti-inflammatory cytokines strongly
(Balkwill et al., 2001). Chronic inflammation influences the outcome of inflammatory
has also been proposed recently to be an events. Cytokine genes are highly
important factor in prostate cancer polymorphic and the stability and function
pathogenesis (Platz et al., 2004). of the cytokines that specific variants
Inflammatory processes involve the action encode, which in turn can affect the
of a number of mediators, including inflammation response, depend on the
metabolites of arachidonic acid, cytokines, location and nature of the polymorphisms.
chemokines, and free radicals. The balance
Prostate Cancer and Inflammatory Genes 59
The role of sequence variants in two some situations and harmful in others. For
genes encoding cytokines (MIC-1, IL-1RN) example, decreased stability of the mRNA
was evaluated in the studies underlying this or protein encoded by the MIC-1 gene could
thesis. Both of these cytokines are important lead to a prolonged inflammatory response,
regulators of the inflammatory response, which could be advantageous for combating
although MIC-1 has also been documented infectious agents. However, chronic
to act as an inhibitor of tumour growth. The exposure of inflammatory mediators leads to
haplotype-tagging approaches used enabled increased cell proliferation, mutagenesis,
us to elucidate most of the genetic variation oncogene activation, and angiogenesis - the
with a limited number of SNP genotypes. ultimate results of which will be
The anti-inflammatory cytokine IL-1RN proliferation of cells that have lost normal
is well known for its role as a competitive growth control (Shacter et al., 2002).
inhibitor of the pro-inflammatory cytokines Another interesting observation
IL-1α/β, and thus as a “neutralizer” of the regarding the association between these two
physiological and pathophysiological genes and prostate cancer risk is the fact that
inflammatory responses. Our results both genes are expressed in macrophages.
revealed that the most common haplotype Macrophages, together with lymphocytes,
of IL-1RN was associated with an increased are the predominant cell types in areas of
risk of prostate cancer. The genetic analysis chronic inflammation, a condition that is
of the MIC-1 gene showed that a non- extremely common in the prostate, but are
synonymous polymorphism in exon two was rarely found in tumour tissues. Furthermore,
associated with prostate cancer. The increased macrophage activity and
polymorphism alters an amino acid in the infiltration of lymphocytes in the tumour
mature protein, but although this variant has has been found to be related to poor
been previously reported, no functional prognosis in prostate cancer (Irani et al.,
studies have evaluated its biological role. 1999; Lissbrant et al., 2000; McArdle et al.,
Further studies of other types are needed to 2004). Both MIC-1 and IL1-RN are anti-
elucidate the biological rationale for the inflammatory cytokines; MIC-1 has been
association between sequence variants in shown to down-regulate the overall activity
these two genes and prostate cancer, but it is of macrophages, whereas IL1-RN is known
tempting to speculate that these variations to inhibit the function of IL1-α/β, and
could be linked to an imbalance in the thereby decrease the pro-inflammatory
inflammatory process. activity of the macrophage. Since
Polymorphisms affecting susceptibility to macrophages produce a number of
complex disorders, like prostate cancer, are mediators that strongly influence cell
likely to be fairly common in the population, proliferation and differentiation under both
and therefore should not be deleterious for physiological and pathological
the carrier. They are unlikely therefore to circumstances, as well as being the key cells
disrupt gene activity or protein function regulating reactions leading to and driving
completely, but instead affect gene chronic inflammation, increases in their
expression levels, mRNA stability, protein activity could enhance tumour initiation and
folding or the affinity of the encoded progression. Sequence variants in these two
proteins to their receptors or substrates. genes could be the causes of such increases
These polymorphisms might be beneficial in in activity.
60 Prostate Cancer and Inflammatory Genes
Future perspectives
Many questions arise from the studies MIC-1. This effect could be reversed in a
appended to this thesis, but the overall dose-dependent manner by injecting the
findings are in concordance with the mice with a monoclonal antibody specific
growing body of evidence that chronic for human MIC-1 (personal communication,
inflammation plays an important role in the Samuel Breit). Collectively, these
development of prostate cancer. In the two observations raise the possibility that the
association studies reported in Papers II and large variations in MIC-1 values seen among
III we detected sequence variations in two stage IV patients could influence the
inflammatory genes that alter the risk for outcome for these patients. Performing a
developing prostate cancer. Since these follow-up study in which clinical parameters
findings are novel, there is a need for large- and disease-progression-data are collected
scale, independent confirmatory studies. regarding the cases included in the CAPS
However, if the results are corroborated, the study, could help assess this possibility.
next steps would be to identify the causal MIC-1 has been reported to be expressed
varints in these regions and to elucidate the in both epithelial cells and macrophages, two
underlying mechanism(s) responsible for types of cells that are abundant in tissues in,
these associations. Since the cytokine and adjacent to, prostate tumours. To
pathways are highly interrelated it is possible further elucidate the role of MIC-1 in cancer
that polymorphisms in several related pathogenesis, it would be valuable to
cytokines are needed to cause disease. determine how much MIC-1 (if any) these
Furthermore, the effect of variations in the cell types produce in normal prostate tissue
ability to influence an inflammatory and the various prostate cancer stages. This
response may not be manifest unless could be done by analyzing protein
exposure to certain infectious agents or expression in prostate tissue sections from a
oxidants occurs. These issues may have to selected number of cases and controls drawn
be addressed in order to identify the casual from the CAPS study. Another approach
variant or variants in the cytokine genes. would be to use sections of prostate tissue
The results of Study IV clearly showed a with various disease stages from TRAMP
positive correlation between serum MIC-1 mice to examine the localisation and
levels and disease stages. Among the group expression pattern of the MIC-1 protein.
of patients with TNM-stage IV there were In summary, although multiple pieces of
large variations in MIC-1 values. A recent evidence clearly indicate that prostatic
study found that mice transfected with inflammation plays an important role in the
prostate cancer cell line DU145 expressing development of prostate cancer, much work
human MIC-1 dramatically lost weight, and remains to be done to elucidate the
the degree of weight loss was proportional underlying mechanims.
to serum levels of tumour-derived human
62 Prostate Cancer and Inflammatory Genes
Conclusions
Based on the findings in Paper I-IV, the following conclusions can be made:
ü Genetic analysis in a large number of subjects from two different study populations
in Sweden failed to support a role of sequence variants in the MSR1 gene in the
development of hereditary or sporadic prostate cancer.
ü MIC-1 serum levels are elevated in prostate cancer patients compared to control
subjects. In addition, MIC-1 serum levels were significantly associated with age and
disease stage. The differences in serum concentration between prostate cancer
patients and healthy individuals are not large enough to provide a discriminatory
diagnostic test for the presence of this disease. However, serial measurements of
MIC-1 may be useful in the management of prostate cancer.
ü The findings of the studies underlying this thesis are in overall concordance with the
growing evidence from epidemiological, molecular, and histopathological studies
that chronic inflammation plays an important role in the development of prostate
cancer. The results indicate that further research is required on the possible roles of
genetic variation in genes involved in the inflammatory process and on how this
variation may affect susceptibility to, and development of, prostate cancer.
Prostate Cancer and Inflammatory Genes 63
Acknowledgements
The work for this thesis was performed at populations, Kristina C, for god company
the department of Radiation Sciences, during the writing procedure, and Camilla
Oncology, Umeå University. I hereby wish T, Beatrice M, Sara L, Stina for valuable
to sincerely thank all of those involved in comments and enthusiasm in my research.
helping me to complete it. Mark Hunter, for introducing me into the
In particular I would like to thank: tricky business of MIC-1 ELISA.
Henrik Grönberg, my supervisor, for Anders Bergh, for all interesting
excellent scientific guidance and for helpful discussions and for valuable comments on
discussions throughout my research studies. the final draft of this thesis.
Also thanks for your great understanding in All the colleagues at the Department of
how I have organized the research studies Medical Biosciences, for providing a nice
together with my medical studies. working-atmosphere.
Jianfeng Xu and Lilly Zheng, for your Carina Ahlgren and Anna Wernblom for
excellent collaboration and assistance in excellent help no matter what kind of
experiments and for stimulating the problems I have brought to you.
scientific discussions. To all I have forgotten to mention
All co-authors, for contributing to my Gun-Brith and Royne, my parents in law,
work. for all your support both of my family and
All the people in the research group Björn- me.
Anders J for friendship and for all My parents, Monica and Jörgen for
interesting discussions in many different devoted support and for always believing in
areas, and for always being there with a me.
helping hand, Fredrik W for your invaluable Margareta and Freddie for being part of
and comprehensive statistical help and for given the family and for your support.
me self-confidence at the squash court, Benjamin and Tuva, our wonderful kids,
Ingela G for truly skilful laboratory for always helping me keep things in
assistance and Lena L for keeping track on perspective and for bringing so much joy
everything and helping me when I have run into our lives.
out of time, Monica E, Elisabeth S and Anna, my love, for sharing your life with
Karin A for all your work with the study me, and for your endless support.
64 Prostate Cancer and Inflammatory Genes
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