Professional Documents
Culture Documents
LectureBioInorg PDF
LectureBioInorg PDF
– bulk elements: C, H, O, N, S, P
– maintaining the osmotic pressure body fluids
Na, K, Ca, Mg, Cl
therapeutic width
4. Metabolism of microelements
– uptaking, transport, storage of trace elements
Experimental methods for study of
biological systems
[ML n ]
M(H2O)n + nL MLn + nH2O βn =
[M (H 2 O) n ][L]n
βn = K1·K2· ... ·Kn
Complex formation processes
General equilibrium
pM + qA + rB + sH MpAqBrHs
• Type of ligands
- formation of chelate rings (five- or six-membered ring) →
enhance the stability of complexes: chelate effect
Potential donor atoms in biological systems
NH2
N
N
O O O
N
N O CH2 O P O P O P O-
-
O O- O-
HO OH
nukleobázis:
nucleic N-donorok
base: N-donors soft metal
soft ions
fémek
foszfát: O-donor
phosphate: O-donors hard hard
metalfémek
ions
Metalloporphyrines
N N
M
M2+ + H2P MP + 2 H+
N N
Order of stabilities
Mg(II) < Zn(II) < Cu(II) < Fe(II) < Ni(II) < Pd(II) < Pt(II)
O O
O O O O
O O O O
O O
18-crown-6 Dibenzo-crown-6
Complexes of alkali metal ions
O O
cryptand e.g. 2,2,2 N O O N
O O
Factors influencing the stability of alkali
complexes
O
O O O O
O O O O
O
O O O O
N O O N N N
O O O O
lgβNa(I)=6,95 lgβNa(I)=3,0
lgβK(I)=9,45 lgβK(I)=4,35
methanol/water = 95/5
Factors influenced the stability
of alkali complexes
O O O O
O N
CH3
lgβNa(I) = 4.3 (methanol) lgβNa(I) = 3.7 (methanol)
lgβK(I) = 6.1 (methanol) lgβK(I) = 5.3 (methanol)
Factors influenced the stability
of alkali complexes
O O
N O O N
O O
Importance
• specific chelators (diagnostic, therapy)
• phasetransfer: transport of KMnO4 in organic phase
Complexes of alkali earth metals
O-donor ligands are preferred
• crown ethers, macrocyclic
• edta HOOC COOH
N CH2 CH2 N
HOOC COOH
O
N O
O
O
O
O
N O
O
Alkali and alkali earth metal ions:
biological roles
• bulk elements: C, H, O, N, S, P
Na, K, Ca, Mg, Cl
Alkali and alkali earth metal ions:
biological roles
Distribution (mmol/1000 g)
Calamary
Intracellular fluid of neuron 49.0 410.0
Extracellular fluid of neuron 440.0 22.0
Alkali and alkali earth metal ions:
biological roles
Membrantransport
processes
Alkali and alkali earth metal ions:
biological roles
Membrantransport processes
Transport across the membrane
Membrantransport processes
Transport across the membrane
Membrantransport processes
Transport across the membrane
ADP
P1
Ca2+-binding proteins
• trigger proteins: e.g.: calmodulin
Two photosystem
I. reduction of CO2 (dark reaction)
CO2 + NADPH + H+ + ATP → C6H12O6
+ ADP + Pi + NADP+
O2 + NADPH + H+ + ATP
Biological roles of alkali earth metals
Mg2+ - photosynthesis
Biological roles of alkali earth metals
Mg2+ - photosynthesis
90Sr –
radioactive, t½ = 28 year, can be built up in bones
BaSO4 – contrast compound (X-ray)
Complexes of iron(II)
Complexes:
• in solution: [Fe(H2O)6]2+ (octahedral, pale green)
• easy oxidation to iron(III) (in basic solution)
• redoxpotential of Fe(III)/Fe(II) is changed by formation of
complexes
Fe3+/Fe2+ : CN– +0,36 V
H2O +0,77 V
Phen +1,12 V
Complexes of iron(II)
Complexes:
• intermediate (hard/soft) acid: binding to O-, N- and S-donor-
atoms
Complexes:
• in solution: [Fe(H2O)6]3+ (pale violet)
• stable complexes in acid and basic pH range
• characteristic reaction: hydrolysis
pH > 1:
[Fe(H2O)6]3+ + H2O [Fe(H2O)5(OH)]2+ + H3O+
Ks = 1,8⋅10–3
Iron proteins
iron-sulphur others
proteins
Biological role of iron
Iron proteins
5. coordination side:
imidazole N
Hemoglobin (oxygen transport)
It contains 4
globin units
parital pressure of
oxygen in the lungs
partial pressure of
oxygen in the muscle
– oxygen transporter in
molluscs
– 4 part, one part
contain two iron, it
binds one O2
Cytochromes
provide electrons
via following
reaction:
Fe2+ Fe3+ + e–
Cytochromes
Cytochrome P450
• part of monooxygenase enzymes
• activation of dioxygen molecule
RH + O2 + 2 e– + 2 H+ → ROH + H2O
Fe(III) Fe(IV)
O-(Tyr) O-(Tyr)
H2O + O2 H2O2
Catalase
Iron-sulphur proteins
• Tetrahedral geometry of iron
• Iron binding to inorganic and organic sulphur donors (Cys) S
• one e–-pass
– e–
• reduced ferredoxin oxidized ferredoxin
+ e–
• unusually low redox potenctial: –0,05 - –0,49 V → they
behave as a reduction agents
R O-
O
C Fe+3
Fe+3
N O- 3
R O- 3
R
hydroxamate-type catecholate-type
e.g. ferrichrom e.g. enterobactin
Storage of iron
Ferritin
It contains 24 protein units (~ 175 amino acids/unit)
4500 iron atoms/ferritin (25 %)
iron micelle (7 nm diameter) : (FeOOH)8⋅FeO⋅H2PO4
uptaking: iron(II) form, it is followed by oxidation to iron(III)
Hemosiderin
storage of excess of iron
cca. 45 % iron
Biological role of copper
• Essential for every living organisms
• 80-120 mg / 70 kg body
• uptaking: 1,5-3,0 mg/day, < 10 mg
• toxicity: > 15 mg
• diseases caused by copper:
excess of copper: Wilson disease
missing of copper: Menke’s disease
Biological role of copper
Functions of copper proteins
Asp 81
H 2O
His 78
His 118 His 46
Zn2+
Cu2+
His 61 His 44
His 69
Biological role of copper
Superoxide dismutase (SOD)
Zn: regulation of structure
Cu: takes part in redox processes
Reactions:
Cu2+(His–)Zn2+ + O2– + H+ → Cu+ + (HisH)Zn2+ + O2
Cu+ + O2– + H+ + (HisH)Zn2+ → Cu2+(His–)Zn2+ + H2O2
Biological role of copper
Ceruplasmine:
1005 amino acid (single protein chain), 6 copper
Function:
• oxidase
• ferrioxidase: Fe2+ → Fe3+
• transport of copper
• metabolism of copper → missing of ceruloplasmine →
Wilson disease, Menke’s disease
Biological role of zinc
The second most abundant trace element
The least toxic element
Essential for every living organism
2-4 g zinc / 70 kg body
Zinc metalloproteins
1940 – first zinc enzyme: carbonic anhydrase
1985 – 100 zinc containing enzymes
1995 – 300 enzymes + > 100 zinc containing proteins
Role of zinc:
• active centrum (catalysing of acid-base processes)
• regulating of structure
Carboanhydrase
• Process:
CO2 + H2O HCO3– + H+
k = 3·10–2 s–1, with enzyme: k = 6·105 s–1
• Zn: tetrahedral geometry,
• coordination: 3 histidine + 1 H2O
• Zn – H2O → Zn-OH– → interact with CO2
Carboxypeptidase A
• Process: hydrolysis of peptide bound at C-termini
• 1 Zn + 307 amino acids (M ~ 34.000)
• coordination: 2 histidine + 1 glutamate COO– + 1 H2O
Carboanhydrase
Thr 199
His 64
Glu 106
His 96
H2O Glu 117
Zn2+
His 119
His 94
Gln 92
Carboxypeptidase A
Zinc fingers
Important aspects:
• metal complexes of chelatable or macrocyclic ligands have
high stability
• neither ligands nor complex are not toxic
• ligand is selective
Pharmaceutical application of metals
H 3N Cl H 3N O C
Pt Pt
H 3N O C
H 3N Cl
O
cisplatin carboplatin
Pharmaceutical application of metals
Mechanism of cisplatin
DNA
NH3
H 3N (II) G
Pt H3N Pt(II) Guanin (DNA)
H 3N G
Cl
Pharmaceutical application of metals
CH3
O O O
O N O O O
V V
N O O O O
O
CH3
bis(picolinato)oxovanadium(IV) bis(maltolato)oxovanadium(IV)
Pharmaceutical application of metals
Myochrysine H 2C SO3Na n
Allochrysine
Pharmaceutical application of metals
O O N
H
H 2N S N
N
sulfadiazin
Pharmaceutical application of metals
Contrast compounds
• X-ray contrast:
heavy metal salts: e.g.: BaSO4
organic iodine compounds
• NMR tomography: Gd-polycarboxylate complexes
Pharmaceutical application of metals
Contrast compounds
• NMR tomography: Gd-polycarboxylate complexes
COO-
-
OOC N COO-
DTPA - Magnevist
N N
-
OOC COO-
-
OOC COO-
N N
DOTA - Dotaterm
N N
-
OOC COO-
Pharmaceutical application of metals
Radioactive isotopes
Diagnosis
• > 80 %, 99mTc, γ-ray (t1/2(γ) = 6 hours, t1/2(β) = 212000 years)
Therapy
• outer ray source
• Injection: 186Re, 188Re