Professional Documents
Culture Documents
Articulo Cu (II) Estructura, Uv Vis
Articulo Cu (II) Estructura, Uv Vis
Research paper
A R T I C LE I N FO A B S T R A C T
⁎
Corresponding authors.
E-mail addresses: bikas@sci.ikiu.ac.ir, bikas_r@yahoo.com (R. Bikas), valadbeigi@sci.ikiu.ac.ir (Y. Valadbeigi).
https://doi.org/10.1016/j.ica.2020.119756
Received 29 December 2019; Received in revised form 23 April 2020; Accepted 10 May 2020
Available online 15 May 2020
0020-1693/ © 2020 Elsevier B.V. All rights reserved.
R. Bikas, et al. Inorganica Chimica Acta 510 (2020) 119756
2. Experimental The dioxime ligand, L, was synthesized from the reaction of hy-
droxylamine hydrochloride and 1,2-di(pyridin-2-yl)ethane-1,2-dione
2.1. Materials and instrumentations according to previous reports [21]. The reaction of L with Cu
(NO3)2·3H2O in methanol under aerial atmosphere gave blue solution
Copper(II) nitrate trihydrate, 2-pyridinecarboxaldehyde, hydro- and the dark-blue crystals were obtained by evaporating of the solvent
xylamine hydrochloride, and other materials and solvents were pur- during one week. The structure of the obtained crystals was determined
chased from Aldrich and used without any further purification. The by single crystal X-ray analysis. The molecular structure of compound 1
oxime ligand, (1E,2E)-1,2-di(pyridin-2-yl)ethanedione dioxime or is shown in Fig. 1 and selected bond lengths and angles are collected in
(1E,2E)-2,2′-dipyridylglyoxime (L), was synthesized and characterized Table 2. Diffraction studies indicated that the blue crystals are related
according to previous reports [21]. FT-IR spectra in the range of to a mononuclear Cu(II) coordination compound and during the for-
400–4000 cm−1 were recorded with KBr on a Bruker TENSOR 27 FT–IR mation of 1 the initial dioxime ligand is converted to a new ligand
spectrophotometer. Elemental analyses for C, H and N were performed containing a furoxan ring. The furoxan ring is generated by in-situ cy-
on a Carlo ERBA Model EA 1108 analyzer. Cu content of the compound clization reaction during the coordination of ligand to the Cu(II) ion.
was determined by atomic absorption analysis using a Varian Spectra This ring is disordered in two positions which is mainly due to the
AA-220 equipment. The UV–Vis spectra were recorded on a thermo- symmetric character of the obtained ligand. The furoxan ring is almost
spectronic Helios Alpha spectrophotometer. planar and the C]N and NeO bonds of the ring are in the normal range
observed in similar rings [29]. The length of external NeO bond (O2-
2.2. Synthesis of [Cu(Lʹ)(NO3)2] (1) N3 = 1.236(3) Å) is relatively shorter than NeO bonds of the furoxan
ring (O1-N4 = 1.366(3) O1-N3 = 1.437(3) Å) which is in agreement
The dioxime ligand (0.242 g, 1.00 mmol) was dissolved in 20 ml of with the previously reported furoxan rings [29] and can be attributed to
methanol and the solution was added to a flask containing 20 ml of the electrostatic interactions between O– and N+ atoms. The obtained
methanolic solution of Cu(NO3)2·3H2O (0.241 g, 1.00 mmol) and the ligand acts as a N2-donor bidentate ligand and is coordinated to the
resulting mixture was refluxed for 12 h under aerial atmosphere. The metal ion through two nitrogen atoms of the pyridine rings. As it is seen
obtained solution was cooled to room temperature and the undissolved in Fig. 1, a seven membered CuC4N2 ring is generated by coordination
residue was removed by filtration. The dark-blue crystals of 1 were of these nitrogen atoms to the Cu(II) ion and the N–Cu–N angle is
2
R. Bikas, et al. Inorganica Chimica Acta 510 (2020) 119756
Table 1
Crystallographic data and refinement details for compound 1.
Compound 1
3
R. Bikas, et al. Inorganica Chimica Acta 510 (2020) 119756
and the aerial oxygen is the sole oxidant in this reaction (see L via different donor sites causes different structural isomers of [Cu(L)
Scheme 2b). We could not obtain compound 1 in the control experi- (NO3)2] molecule. Fig. 2 compares the optimized structures and relative
ment in the absence of oxygen (inert atmosphere). This matter indicates energies of five possible isomers for [Cu(L)(NO3)2] molecule in me-
the presence of molecular oxygen as an oxidant is essential for the thanol (isomers a-e). The isomer [Cu(L)(NO3)2]-a is the most stable
formation of furoxan ring. Nevertheless, it is clear that the Cu(II) ion structure in which the Cu(II) ion simultaneously interacts with the ni-
can also involve in the oxidation/reduction process in this reaction and trogen atoms of two pyridine rings. This result is in agreement with
facilitate the formation of furoxan ring. The Cu–N and Cu–O bonds in experiment i.e. the molecule [Cu(L)(NO3)2]-a is the true precursor of
the structure of compound 1 are in the normal range observed for Cu(II) the final compound synthesized in this work.
coordination compounds with N- and O-donor ligands [31]. By con- Formation of the furoxan ring requires dehydrogenation of the L in
sidering the presence of several oxygen atoms from nitrate anions and [Cu(L)(NO3)2]-a. The general mechanism proposed for dehydrogena-
furoxan ring, it is predictable that the crystal structure of 1 has several tion of L is deprotonation of the ligand followed by electron transfer
intermolecular hydrogen bond interactions. The information of the from [Cu(L-H)(NO3)2]− to O2 [16,33]
CeH···O interactions in the crystal structure of 1 is available in Table S1
−H+ +O2
and part of them is shown in Fig. S2. These interactions may have [Cu(L)(NO3)2] → [Cu( L− H)(NO3)2]− → [Cu( L− H)(NO3)2] + O2−
significant effect on the stability of the crystal structure of 1. −e
Fig. 2. Relative energies of different isomers for the [Cu(L)(NO3)2] molecule. The structures have been optimized at B3LYP/6-31+G(d) level in methanol solvent.
The energies are in kJ mol−1.
4
R. Bikas, et al. Inorganica Chimica Acta 510 (2020) 119756
Fig. 3. The optimized structures of the possible intermediates from [Cu(L)(NO3)2] to [Cu(Lʹ)(NO3)2] in methanol. The partial charge on the Cu atom, q, computed
using APT method, also is shown for each intermediate molecule.
5
R. Bikas, et al. Inorganica Chimica Acta 510 (2020) 119756
the potent oxidizing agent for this reaction [16,33]. The reported acidity and weak ability to be deprotonated.
electron affinity (EA) value of O2 in gas phase is 86.8 kJ mol−1 [36]
indicating that it cannot oxidize the negatively charged intermediate Declaration of Competing Interest
molecule. However, because the reaction takes place in methanol, effect
of medium and solvation should be also considered. Hence, instead of The authors declare that they have no known competing financial
unsolvated O2, electron affinity values for its solvated forms, interests or personal relationships that could have appeared to influ-
O2(CH3OH)n, were computed. The optimized structures for the clusters ence the work reported in this paper.
O2(CH3OH)2,4 and O2−(CH3OH)2,4 are shown in Fig. S5 and their
electron affinities are summarized in Table S2. Solvation increases EA Acknowledgements
of O2 dramatically so that the EA values for O2, O2(CH3OH)2, and
O2(CH3OH)4 are 86.8, 418.1, and 468.5 kJ mol−1, respectively. Hence, The authors are grateful to Imam Khomeini International
oxidation of [Cu(Lʹ)(NO3)2]− moiety is thermodynamically more fa- University, Iran for financial support of this study.
vorable using solvated forms of O2 rather than unsolvated O2. During
oxidization of [Cu(Lʹ)(NO3)2]− to [Cu(Lʹ)(NO3)2], Cu retrieves its oxi- Appendix A. Supplementary data
dation state and the tetrahedral structure converts to octahedral
(Fig. 3). CCDC 1973988 contains the supplementary crystallographic data
By considering the mentioned findings based on experimental and for compound 1. This data can be obtained free of charge via http://
theoretical studies and also the previous reports in literature, it is ob- www.ccdc.cam.ac.uk/conts/retrieving.html, or e-mail: deposit@
vious that the in-situ generation of furoxan ring during the formation of ccdc.cam.ac.uk. Supplementary data to this article can be found online
copper coordination compound is occurred by several steps. Briefly, in at https://doi.org/10.1016/j.ica.2020.119756.
the first step the pyridine rings of the ligand coordinate to the Cu(II) ion
by considering their high donor ability and higher stability of the ob- References
tained compound in comparison to the other possible coordination
modes. In such condition, the orientation of the dioxime moiety [1] a) V.J. Ram, A. Sethi, M. Nath, R. Pratap, Five-membered heterocycles in the
changes from trans to the cis configuration. Therefore, they are located chemistry of heterocycles, (2019) 149-478; b) G. Nikonov, S. Bobrov, 1,2,5-
close to each other which this orientation is one of the important re- Oxadiazoles in Comprehensive Heterocyclic Chemistry III, 5 (2008) 315-395; c) A.
Albini, S. Pietra, Heterocyclic N-oxides, CRC Press Inc., (1991) Boca Raton, USA.
quirements for the formation of furoxan ring from vicinal dioximes. The [2] U. Galli, L. Lazzarato, M. Bertinaria, G. Sorba, A. Gasco, S. Parapini, D. Taramelli,
acidity of OH groups increases by coordination of the ligand to the Eur. J. Med. Chem. 40 (2005) 1335–1340.
metal ion and consequently, the ligand releases one H+ in the next step [3] G.F.S. Fernandes, P.C. Souza, L.B. Marino, K. Chegaev, S. Guglielmo, L. Lazzarato,
R. Fruttero, M.C. Chung, F.R. Pavan, J.L. Santos, Eur. J. Med. Chem. 123 (2016)
which also follows by the oxidation of compound with dissolved oxygen 523–531.
in the methanol. In the next step, the oxidation-deprotonation of the [4] a) L. Liang, K. Wang, C. Bian, L. Ling, Z. Zhou, Chem.-A Eur. J., 19 (2013)
compound and intramolecular cyclization takes place to form the fur- 14902–14910; b) Y. Li, Z. Zhang, Z. Ge, B. Wang, W. Lai, Y. Luo, Chin. J. Chem., 31
(2013) 520–524; c) B. Wu, H. Yang, Q. Lin, Z. Wang, C. Lu, G. Cheng, New J. Chem.,
oxan ring. The Cu(II) ion acts as an important species in the oxidation 39 (2015) 179–186.
process by changing the oxidation state from II to I which also follows [5] J. Wang, J. Li, Q. Liang, Y. Huang, H. Dong, Propellants Explos. Pyrotech., 33
by the oxidation to Cu(II) by oxygen in the next steps. Therefore, the (2008) 347–352; b) W. Zheng, J. Wang, X. Ren, Z. Chen, J. Tian, Y. Zhou, J. Hazard.
Mater., 177 (2010) 738–742.
combination of the coordination of ligand to the metal ion and the
[6] a) R. Matsubara, A. Ando, Y. Saeki, K. Eda, N. Asada, T. Tsutsumi, Y.S. Shin, M.
catalytic effect of Cu(II) ion in oxidative cyclization reaction are the Hayashi, J. Heterocycl. Chem., 53 (2016) 1094–1105; b) R. Matsubara, Y. Saeki, J.
effective parameters in the formation of furoxan ring from dioxime Li, K. Eda, Synthesis; 45 (2013) 1524–1528.
group in the current case. Although the copper ion has significant role [7] a Z.-X. Yu, P. Caramella, K.N. Houk, J. Am. Chem. Soc. 125 (2003) 15420–15425;
b J.K. Gallos, T.V. Koftis, V.I. Karamitrou, A.E. Koumbis, J. Chem. Soc., Perkin
in this process, the molecular oxygen dissolved in methanol is the Trans. 1 (1997) 2461–2462.
oxidant and the copper ion can be considered as a catalyst or electron [8] J.-Q. Zhao, M.-Q. Zhou, J. Zuo, X.-Y. Xu, X.-M. Zhang, W.-C. Yuan, Tetrahedron 71
transferring intermediate that increases the rate of reaction and facil- (2015) 1560–1565.
[9] S. Leyva, V. Castanedo, E. Leyva, J. Fluorine Chem. 121 (2003) 171–175.
itates the formation of furoxan ring. [10] R.M. Paton, Comprehensive Heterocyclic Chemistry II 4 (1996) 229–265.
[11] a M.A. Motaleb, A.A. Selim, Bioorg. Chem. 82 (2019) 145–155;
4. Conclusion b D.V. Stynes, I. Vernik, F. Zobi, Coord. Chem. Rev. 233–234 (2002) 273–287.
[12] O. Das, T.K. Panie, J. Chem. Sci. 124 (2012) 1269–1273.
[13] P.G. Wang, M. Xian, X. Tang, X. Wu, Z. Wen, T. Cai, A. Janczuk, J. Chem. Rev. 102
In summary, a new mononuclear Cu(II) coordination compound, (2002) 1091–1134.
[Cu(Lʹ)(NO3)2]n (1), was synthesized in the reaction of Cu(NO3)2·3H2O [14] O. Das, S. Paria, T.K. Paine, Tetrahedron Lett. 49 (2008) 5924–5927.
[15] C.R. Groom, I.J. Bruno, M.P. Lightfoot, S.C. Ward, The Cambridge Structural
and dioxime ligand and characterized by elemental analysis, FT-IR
Database. Acta Cryst., B72 (2016) 171–179.
spectroscopy and single crystal X-ray analysis. The studies indicated the [16] a C. Richardson, P.J. Steel, Aust. J. Chem. 53 (2000) 93–97;
formation of a furoxan ring from the in-situ intramolecular cyclization b O. Das, S. Paria, E. Zangrando, T.K. Paine, Inorg. Chem. 50 (2011) 11375–11383;
c C.K. Prout, H.M. Powell, J. Chem. Soc. (1965) 4882–4887.
reaction of dioxime group. The mechanism of in-situ formation of fur-
[17] Z.-D. Xu, H. Liu, S.-L. Xiao, M. Yang, X.-H. Bu, J. Inorg. Biochem. 90 (2002) 79–84.
oxan ring from dioxime group was studied theoretically at B3LYP/6- [18] T.R. Lakshman, J. Deb, T.K. Paine, Dalton Trans. 45 (2016) 14053–14057.
31+G(d) level of theory in methanol. It was found that the ring for- [19] L. Zhai, X. Qu, B. Wang, F.-Q. Bi, S. Chen, X. Fan, G. Xie, Q. Wei, S. Gao,
mation proceeds via deprotonation of L in [Cu(L)(NO3)2] followed by ChemPlusChem 81 (2016) 1156–1159.
[20] D. Soules, W.J. Holland, S. Stupavsky, Microchim. Acta 58 (1970) 787–792.
oxidation by O2(CH3OH)n. In the first deprotonation step, NO3− causes [21] C.M. Sabate, H. Delalu, Heteroat. Chem. 23 (2012) 59–65.
acidity enhancement assisting more easily deprotonation while the [22] M.K. Krawczyk, M.S. Krawczyk, M. Siczek, T. Lis, Acta Cryst. E 68 (2012)
second deprotonation is along with ring formation so that both Cu and m1174–m1175.
[23] S. Krompiec, M. Filapek, I. Grudzka-Flak, A. Slodek, S. Kula, J.G. Malecki, J. Malarz,
NO3− groups influence the acidity of the ligand in the second depro- G. Szafraniec-Gorol, M. Penkala, E. Schab-Balcerzak, M. Paluch, M. Mierzwa,
tonation. During the second deprotonation, Cu, by change in its oxi- M. Matussek, A. Szlapa, M. Pajak, D. Blach, B. Marcol, W. Danikiewicz,
dation state from II to I, withdraws the negative charge of the depro- B. Boharewicz, A. Iwan, Molecules 20 (2015) 4565–4593.
[24] G.M. Sheldrick, Acta Cryst., C 71 (2015) 3–8.
tonated ligand and induces ring formation. From the calculated values [25] Oxford Diffraction CrysAlisCCD and CrysAlisRED in Kuma KM4-CCD software,
of ΔH and ΔG, it was proposed that the unsolvated O2 cannot oxidize Oxford Diffraction Ltd. (2009), Yarnton, Oxfordshire, England.
the deprotonated molecule, instead the oxidation is thermodynamically [26] S. Miertus, J. Tomasi, Chem. Phys. 65 (1982) 239–245.
[27] J. Cioslowski, P.J. Hay, J.P. Ritchie, J. Phys. Chem. 94 (1990) 148–151.
preferred to be carried out by the solvated oxygen, O2(CH3OH)n. The [28] M.J. Frisch, G.W. Trucks, H.B. Schlegel, G.E. Scuseria, M.A. Robb, J.R. Cheeseman,
isolated ligand L, does not undergo ring formation because of its low
6
R. Bikas, et al. Inorganica Chimica Acta 510 (2020) 119756
G. Scalmani, V. Barone, B. Mennucci, G.A. Petersson, H. Nakatsuji, M. Caricato, X. 119186; b) N. Rad-Yousefnia, B. Shaabani, M. Korabik, M. Weselski, M. Zahedi, U.
Li, H.P. Hratchian, A.F. Izmaylov, J. Bloino, G. Zheng, J.L. Sonnenberg, M. Hada, M. Englert, R. Bikas, D. Szeliga, M. Otreba, T. Lis, Dalton Trans., 48 (2019)
Ehara, K. Toyota, R. Fukuda, J. Hasegawa, M. Ishida, T. Nakajima, Y. Honda, O. 11421–11432; c) K. Nejati, A. Bakhtiari, R. Bikas, J. Rahimpour, J. Mol. Struct.,
Kitao, H. Nakai, T. Vreven, J.A. Montgomery, Jr., J.E. Peralta, F. Ogliaro, M. 1192 (2019) 217–229; d) R. Bikas, H. Hosseini-Monfared, M. Korabik, M.S.
Bearpark, J.J. Heyd, E. Brothers, K.N. Kudin, V.N. Staroverov, R. Kobayashi, J. Krawczyk, T. Lis, Polyhedron, 81 (2014) 282–289.
Normand, K. Raghavachari, A. Rendell, J.C. Burant, S.S. Iyengar, J. Tomasi, M. [32] a) K. Nakamoto, Infrared and Raman Spectra of Inorganic and Coordination
Cossi, N. Rega, J.M. Millam, M. Klene, J.E. Knox, J.B. Cross, V. Bakken, C. Adamo, J. Compounds, sixth ed., John Wiley & Sons, Inc., (2009) Hoboken, New Jersey; b) N.
Jaramillo, R. Gomperts, R.E. Stratmann, O. Yazyev, A.J. Austin, R. Cammi, C. Noshiranzadeh, R. Bikas, M. Emami, M. Siczek, T. Lis, Polyhedron, 111 (2016)
Pomelli, J.W. Ochterski, R.L. Martin, K. Morokuma, V.G. Zakrzewski, G.A. Voth, P. 167–172; c) R. Bikas, M. Ghorbanloo, S. Jafari, V. Eigner, M. Dusek, Inorg. Chim.
Salvador, J.J. Dannenberg, S. Dapprich, A.D. Daniels, O. Farkas, J.B. Foresman, J.V. Acta, 453 (2016) 78–85; d) R. Bikas, E. Shahmoradi, N. Noshiranzadeh, M. Emami,
Ortiz, J. Cioslowski, D.J. Fox, Gaussian 09, Revision A.1., Gaussian, Inc.: S. Reinoso, Inorg. Chim. Acta 466 (2017) 100–109; e) R. Bikas, P. Mirzakhani, N.
Wallingford, (2009). Noshiranzadeh, J. Sanchiz, M.S. Krawczyk, D.A. Kalofolias, T. Lis, Inorg. Chim.
[29] a) H. Li, F.-Q. Zhao, H.-X. Gao, J.-F. Tong, B.-Z. Wang, L.-J. Zhai, H. Huo, Inorg. Acta, 505 (2020) 119461.
Chim. Acta, 423 (2014) 256-262; b) B.-D. Wu, X.-Y. Li, J. Liang, X.-H. Geng, H.-S. [33] C. Deville, S.K. Padamati, J. Sundberg, V. McKee, W.R. Browne, C.J. McKenzie,
Huang, H. Huang, J.-Y. Wang, W.-H. Hu, Polyhedron, 139 (2018) 148-154; c) Y. Angew. Chem. Int. Ed. 55 (2016) 545–549.
Liu, C. He, Y. Tang, G.H. Imler, D.A. Parrish, J.M. Shreeve, Dalton Trans., 47 (2018) [34] Y. Valadbeigi, R. Vianello, Int. J. Quantum Chem. 118 (2018).
16558-16566. [35] a) S.D. McCann, S.S. Stahl, Acc. Chem. Res., 48 (2015) 1756–1766; b) H. Yi, Z. Liao,
[30] a) I.B. Bersuker, The Jahn-Teller Effect, Cambridge University Press, (2006); b) R. G. Zhang, G. Zhang, C. Fan, X. Zhang, E.E. Bunel, C.-W. Pao, J.-F. Lee, A. Lei, Chem.
Bikas, F. Ajormal, M. Emami, N. Noshiranzadeh, A. Kozakiewicz, Inorg. Chim. Acta, Eur. J., 21 (2015) 18925-18929; c) X.-H. Shan, H.-X. Zheng, B. Yang, L. Tie, J.-L. Fu,
478 (2018) 77–87; c) N. Noshiranzadeh, M. Emami, R. Bikas, A. Kozakiewicz, New J.-P. Qu, Y.-B. Kang, Nature Commun., 10 (2019) 908; d) S.E. Allen, R.R. Walvoord,
J. Chem., 41 (2017) 2658–2667; d) N. Noshiranzadeh, M. Emami, R. Bikas, K. R. Padilla-Salinas, M.C. Kozlowski, Chem. Rev., 113 (2013) 6234–6458; e) R.
Slepokura, Polyhedron, 133 (2017) 155–161; e) M. Emami, N. Noshiranzadeh, R. Khattar, A. Yadav, P. Mathur, Spectrochim. Acta A, 142 (2015) 375–381.
Bikas, A. Gutierrez, A. Kozakiewicz, Polyhedron, 122 (2017) 137–146. [36] E.S. Chen, W.E. Wentworth, E.C.M. Chen, J. Mol. Struct. 606 (2002) 1–7.
[31] a) S. Jian, H. Ni, F. Liu, S. Gu, P. Yu, Ym Gou, Inorg. Chim. Acta, 499 (2020)