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1988. 26:93-121
Ann. Rev. Phytopathol.
Copyright © 1988 by Annual Reviews Inc. All rights reserved
EVOLUTION OF CONCEPTS
ASSOCIATED WITH SOILBORNE
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PLANT PATHOGENS
John L. Lockwood
Department of Botany and Plant Pathology, Michigan State University, East Lansing,
Michigan 48824
INTRODUCTION
93
0066-428 6/88/0901-0093$02.00
94 LOCKWOOD
exploit living host cells) and a broad host range are regarded as attributes of
primitive groups of fungal parasites of aquatic plants, from which necrotrophy
(the ability to derive nutrients from host cells killed by pathogenic activity)
and saprotrophy (the ability to live on dead organic matter) arose many times
as plants became terrestrial. It is noteworthy that present-day aquatic forms
such as the Chytridiales, Hyphochytridiales, and Oomycetes are represented
by a high proportion of parasites, including many biotrophs. Host specificity
occurs among both biotrophs and necrotrophs, while substrate specificity is
common among saprotrophs.
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A broad host range has been cited as a primitive character and a narrow one
as advanced (61, 63). This may be true of strict biotrophs, but may not
necessarily be so for either facultative biotrophs or obligate necrotrophs. For
example, the vascular wilt pathogens Verticillium and Fusarium oxysporum
are regarded as specialized parasites (59, 61), yet Verticillium has a wide host
range, with little evidence of host specificity, whereas F. oxysporum has a
narrow host range with biotypes specific to species and even cultivars of
plants. By contrast, R. solani is generally regarded as a more primitive,
non-specialized parasite. Most pathogenic rhizoctonias can indeed infect
seedlings of many hosts, yet on older plants, they are rather restricted in their
host range. For example, sugar beet seedlings are readily infected by several
anastomosis groups of R. solani, but root rot of older plants is caused mainly
by isolates of AG2-2 (173).
those parasitizing root tips, root hairs, or superficial cortical cells of roots,
whereas major pathogens penetrate the cortex and endodermis and may enter
the vascular system (144). A third group might also be recognized: the
nonparasitizing exopathogens, also called deleterious rhizosphere microor
ganisms (149, 169, 188), which colonize rhizospheres, apparently without
infecting roots. They include bacteria as well as fungi, and while some cause
distinct and even severe symptoms, others suppress growth and yield without
producing other obvious symptoms.
Knowledge of this latter group arose from substantial yield depressions
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INOCULUM POTENTIAL
The term inoculum potential has had many meanings (9, 11), but I agree with
Baker (11) that its greatest utility lies in describing the "invasive force" of
inoculum, as proposed by Garrett (59, 63), who defined it as "the energy of
CONCEPTS OF SOILBORNE PATHOGENS 97
(63), its importance was emphasized by Baker (9), who, with Benson ( 1 8),
provided experimental evidence for the effects of temperature on the in
oculum potential of R. solani causing damping-off of radish.
The concept of inoculum potential has been criticized as unnecessary; and
objections have been made to the inclusion of energy as one of its key
components, because the energy in question is unmeasurable (174). The
thesis that inoculum potential is based on the energy available to the inoculum
is probably an oversimplification. An adequate complement of hydrolases,
toxins, or other metabolites must be required for the invasion and colonization
of host tissues. However, production of these substances depends in
part on energy-supplying nutrients. In spite of these reservations, I have
found the concept useful in that it provides a focal point for information
about the invasive power of inoculum, and it has stimulated research on
this question.
Since in practice it may not be possible to measure inoculum potential or its
components directly, Winner ( 187) has proposed the idea of Infektionsdruck.
This describes the infective "power" or "pressure" of inoculum in a field,
based on the percentage yield increase of a resistant over a susceptible crop
cultivar. Thus, Infektionsdruck takes into account the number and severity of
infections over a season. It has been used for the classification of different
experimental fields with respect to specific pathogens. Diagrammatically,
Infektionsdruck is placed between inoculum potential and disease severity or
index (58). This seems a useful element of the concept of inoculum potential
in that it provides an objective measure of infective power.
I would divide the concept of inoculum potential into two parts: one dealing
with the energy or infective quality of the inoculum, and the other with
inoculum density (113). It could be argued that they should be combined since
increasing inoculum density increases the total energy or invasive force of the
inoculum. However, the increasing numbers of infections with increasing
inoculum density usually result from an increasing probability of infection by
individual propagules rather than from increased energy, at least up to the
concentration at which propagules may become close enough together to act
synergistically.
98 LOCKWOOD
Inoculum Density
The number of infections or of infected plants frequently is related to the
number of propagules. Baker et al (14) proposed models of the relationship of
inoculum density to number of infections based on a distribution of propa
gules on the vertices of regular tetrahedra. Baker then provided data
corroborating the predicted slopes, when plotted as logs of inoculum density
and numbers of infections (10). These models have been strongly criticized
(174), and there continues to be much discussion about the most appropriate
models to apply to the problem (68, 69).
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size and population density. Though population densities of a species can vary
quite widely, the results indicate an apparently fundamental relationship
between their size and their numbers in soil.
Population density in soil has been related mathematically to the average
distance between propagules, and by analogy to the average distance between
propagules and a root (13). The shape of the curve expressing this relationship
suggests that it might have evolutionary significance inasmuch as the mean
proximity of propagules to the root would not increase much at densities >ca.
3000/g, which is near the upper limit for populations of fungal pathogens in
soil (13,28). However, a corrected formula (119) gives a curve that flattens at
an inoculum density far in excess of most known inoculum densities of plant
pathogens in soil. Other factors seem more likely to determine maximum
inoculum densities in soil.
The number of infections is always much smaller than the number of
inoculum units at or near the host surface. This raises the question whether
infection occurs by single but relatively few propagules (independent action)
or by the joint action of several propagules (synergism) (63). There seems
little doubt that viruses, bacteria, and fungi can indeed infect by single units
(63). However, synergism might be expected when inoculum densities are
high enough for propagules to be close to each other. Dosage-response data
suggest that synergism occurs with R. solani (18). That zoospores of Oomy
cetes characteristically accumulate near host root tips suggests the possibility
of synergistic action; indeed, the joint action of multiple zoospores was
required to establish a sustained infection of bentgrass roots by Pythium
aphanidermatum (100). The extent to which obligate synergism occurs with
other zoosporic pathogens is unknown. Garrett (63) has suggested that the
requirement of hyphal aggregates such as hyphal cushions (R. solani), rhizo
morphs (Armillaria meUea), or mycelial strands (Phymatotrichum om
nivorum) for infection implies a synergistic interaction among the hyphae.
CONCEPTS OF SOILBORNE PATHOGENS 99
Exogenous Energy
The exogenous energy component of inoculum potential is usually provided
by root-derived matcrials (63). Since both soluble and insoluble materials are
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This loss must have enormous consequences for the inoculum potential of root
pathogens and also provides for interactions of these pathogens with other
microorganisms competing for the released materials.
Root exudates that stimulate germination of fungal pathogens are generally
nonspecific with respect to the fungi affected ( 1 57). However, an exception is
Sclerotium cepivorum. whose sclerotia are specifically stimulated in the
presence of roots and bulbs of Allium spp. (89). The active stimulants are
volatile thiols and sulfates produced in soil as microbial degradation products
of alkyl and alkenyl-L-cysteine sulfoxides in exudates.
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One would expect that roots of crop cultivars that exude less should
stimulate germination of fewer pathogen propagules and have fewer in
fections and less disease. Germination of chlamydospores of Thiclaviopsis
basicola was much greater in rhizosphere soil of three host plants [bean,
cotton, and tobacco (47-56%)], than in rhizosphere soil from three nonhosts
[com, wheat, and kale (0- 1 4%) ( 1 34)]. Whether the lower rates of germina
tion in the rhizosphere of the nonhosts is related to their "resistance" is not
known. The entire area of rhizosphere populations and rhizodeposition, as
they affect root infection, seems to me to be a potentially fruitful field for
investigation.
There has long been interest in the possibility of altering root exudates
genetically to reduce root infections. Quantitative or qualitative differences
between the rhizospheres of resistant and susceptible plants have been demon
strated for flax and tobacco and the pathogens F. o xysporum f. sp. lini and T.
basicola, respectively (107, 171), for wheat and C. sativus (7),and for potato
and Verticillium dahliae (8). However, in no case has it been established that
the "resistance" was due to the alteration of the rhizosphere microbial commu
nity.
Root and even foliar pathogens can occupy rhizospheres and spermo
spheres of hosts and nonhosts as sites of survival (101, 156), and F. oxyspor
urn invades cortical cells of nonsusceptible weeds and crop plants (87). It
seems likely that the rhizosphere could serve as a site for survival of many
pathogens in addition to the few so far described as inhabiting this niche.
The fact that roots and other plant parts exude nutrients suggests that
microbial cells, including fungal propagules, might do the same. Motile
bacteria, including plant pathogenic bacteria, are attracted chemotactically to
fungal propagules (4), and bacteria extensively colonize the surfaces of fungal
propagules in soil (55). Fungal surfaces thus could provide an important niche
for bacteria in soil, and this bacterial occupation of fungi could in tum be
detrimental to the fungi (See "Microbial Antagonism").
Endogenous Energy
The concept of inoculum potential also encompasses the endogenous energy
component of the inoculum. Larger propagules of the same type (20, 74,
CONCEPTS OF SOILBORNE PATHOGENS 101
184), or larger propagule types of the same fungus (93), are more infectious
than smaller ones. Below a certain size limit, fragments of mycelial inoculum
of R. solani (74), or of crowns of wheat containing G. graminis var. tritid
( 184), were noninfectious; aggregations of several smaller particles, equal in
total volume to those of larger fragments, remained noninfectious or were less
so than an equivalent mass of larger fragments. The inoculum potential of the
fragments of R. solani was related to their ability to produce the hydrolytic
enzymes cellulase and polygalacturanase ( 106). There was some tendency for
the sclerotia of Cylindrocladium crotalariae recovered from field plots with
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PREDISPOSITION
not only from the standpoint of the basic understanding of mechanisms, but
also for the elaboration of strategies for disease management. In plants very
susceptible to infection, such as seedlings, the avoidance of pre-infection
stress during the period of greatest susceptibility should suffice to prevent
disease. Diseases induced by postinfection stresses might be kept low by
avoidance of stresses during the growing season. Furthermore, there may be
critical periods in the phenology of the plant when avoidance of environmen
tal stresses is more crucial than others. For example, early season drought
stress is more important than later season drought in predisposing com to stalk
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rot (155). In addition, hosts whose root exudates are increased little by
environmental stresses should suffer less disease from pre-inoculation pre
disposition. This advantage may provide opportunities for germ plasm selec
tion.
Coactions
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ANTIBIOSIS During the 1920s and 1930s, it was generally assumed that
microorganisms that interfered with root disease development in soil did so by
means of antibiosis. This possibility was studied extensively during the 1950s
and 1 960s (70), following the discovery of numerous antibiotic substances,
(many finding use in medicine) that were produced by microorganisms iso
lated from soil. These studies led to the conclusion that production of antibio
tic substances probably does not occur in the bulk soil due to an insufficiency
of substrate. Even if produced, these substances would be subject to chemical
or biological degradation or would be adsorbed onto soil colloids. This view
has recently been confirmed ( 186).
Although several investigators provided evidence during this period that
specific antibiotics could be produced in nutrient-rich microsites in soil (71,
1 89, 1 90), there is scant evidence for their production on roots or seeds in
soil. The best evidence for the latter thus far has been gained from genetic
manipulation of an antibiotic-producing strain of Pseudomonas fluorescens
that affords some protection of wheat against take-all ( 170). In greenhouse
experiments, transposon TnS mutants defective in antibiotic production were
less suppressive of that disease than the parent strain; however, antibiotic
production and inhibition of G. graminis var. tritici in vitro and on roots were
restored by complementation of the inactivated gene with wild-type DNA
introduced with a comid vector.
By far the most successful instance of biological control through antibiosis
is the control of crown gall by Agrobacterium radiobacter strain 84 (88).
Biological control capability among strains was associated with their ability to
produce the bacteriocin agrocin.
R. solani (79) and Pythium ultimum (80) on cotton seedlings are controlled
by seed treatment with a strain of Ps. fluorescens that produces two different
antibiotics, one active against each pathogen. Each antibiotic also afforded
106 LOCKWOOD
Baker and coworkers ( 12, 43, 147, 148, 16 1 ) have obtained evidence that
the suppressiveness to fusarium wilts of a Metz sandy loam from the Salinas
Valley of California is due to iron competition by fluorescent pseudomonads,
inhibiting germination and growth of F. oxysporum in rhizospheres. E1ad &
Baker (43) have claimed that competition for iron is the only mechanism so
far clearly identified that induces substantial suppressiveness in soil. Howev
er, there seems to be strong evidence that carbon competition plays a role in a
number of pathogen-suppressive soils ( 1, 1 12); indeed, gennination of
CONCEPTS OF SOILBORNE PATHOGENS 1 07
PARASITISM AND PREDATION Parasitism has been widely studied from the
standpoint of physiology ( 17) and ultrastructure (42, 77) of the host-parasite
interaction. Two broad types of mycoparasitic interactions are recognized
( 1 7 , 1 16): biotrophic, in which the parasite obtains nutrients from the living
cells with little or no apparent harm to the fungal host, at least early in the
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relationship; and necrotrophic, in which the parasite destroys the host cells
before or soon after invasion. Most mycoparasitic interactions that affect the
persistent structures of soilborne plant pathogens are necrotrophic ( 1 1 6).
Little is known of the occurrence of mycoparasitism in soil, but the fact that
persistent structures of several pathogens were invaded by a variety of
mycoparasitic fungi in natural soils suggests that it may be of some im
portance in the regulation of the populations of these pathogens in soil ( 1 1 6).
Numerous attempts have been made to exploit mycoparasitism in biological
control ( 1 16).
The importance of predation upon pathogenic fungi by members of the soil
microfauna is even less well understood. Perhaps the most significant of such
predations, at least in terms of biological control studies, are those by the
mycophagous Collembola that graze the hyphae of R. solani in the rhizo
sphere of cotton (35) , and the mycophagous amoebae that perforate spores
and devour their contents ( 132).
Substratum Interactions
CARBON COMPETITION One of the basic facts of microbial life in the soil is
that these organisms exist in a milieu characterized by an insufficiency of
energy substrate ( 114, 185). A number of assessments of the energy inputs
into both natural and agricultural soils, and of the microbial biomasses that
this energy must support, all suggest that the soil is a grossly oligotrophic
environment, permitting only a few new microbial generations per year ( 114).
nonspecific. Different isolates of actinomy cetes, bacteria, and fungi all im
posed some degree of fungistasis when used to infest sterilized soil ( l08), and
similar inoculations of an artificial soil imposed a general microbiostasis ( 76).
Even bacterial isolates, obtained with methods devised to increase the likli
hood of obtaining fungistatic isolates, were no more fungistatic or numerous
than isolates not so selected (47).
Most investigators (l08 , 1 10 ) have believed that soil fungistasis was caused
by inhibitory substances of microbial origin, but without substantial evidence.
Because of failure in my laboratory to find inhibitory substances in soil, we
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began to evaluate the possibility that soils lacked sufficient available nutrients
to support germination (105, 108 ), a proposition that theretofore had general
ly been rejected.
Most of the fungistasis-sensitive propagules that we (96) te sted, notably the
smaller conidia, also failed to germinate in a small volume of distilled water,
suggesting that a similar deficiency of nutrients in soil could be the cause of
its fungistatic effect. On the other hand, some kinds of spores, such as rust
urediospores, powdery mildew conidia, and heat-activated ascospores of
carbonicolous Ascomycetes, all of which germinated freely on soil, also
germinated in distilled water (96, 182 ).
There was no obvious explanation, in terms of energy deprivation, why
some kinds of spores germinated in water, but not in soil. However, the
realization that a large microbial community exists with a chronic in
sufficiency of food, suggested that its total metabolic activity might deprive
the soil mass of any readily available energy sources. The soil microbial
community was viewed as a nutrient (energy ) sink, possibly causing excess
leakage of nutrients from neighboring fungal propagules via a steepened
diffusion gradient.
This idea was tested in model systems in which the diffusion gradient from
fungal propagules was artificially steepened by percolation of water or a salts
solution through a bed of sand on which the propagules, borne on membrane
filters, were incubated. Several kinds of fungal propagules incubated in these
systems failed to germinate or germinated poorly (23, 83, 96). Since the
systems are aseptic, any possibility of an exogenous inhibitor was ruled out.
By using 14C-Iabeled propagules, and measuring radioactivity in the
leachings, it was determined that exudation was in fact increased (23 ), and
was proportional to the flow rate of the leaching solution (162). Further,
germination was suppressed as flow rate and exudation increased (5 1 , 162).
Evidence for the existence of a microbial sink for energy substrates in soil
was first shown by the more rapid loss of glucose from paper disks incubated
on nonsterile than on sterile soil (109 ). Later it was possible to show that
losses of 14C from fungal propagules on soil also were elevated by measuring
14C02 evolved from, and 14C residual in soil (51 ). Losses of 14C from
CONCEPTS OF SOILBORNE PATHOGENS 10 9
propagules incubated in soil were equal to or greater than those in the model
system, which indicates that energy stress alone might account in large part
for the suppressed germination occurring in soil.
Direct evidence for the role of microorganisms in the energy sinks of soil
was obtained by coincubating several bacteria or fungal spores separated from
14C-Iabeled test propagules by a membrane filter (5). Loss of 14C was greater
in the presence than in the absence of the "sink" microorganisms. Moreover, .
the greater the loss of 14C, the less the germination. The inhibition of spore
germination apparently was due to nutrient stress, as inhibitory materials were
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not found in sterile filtrates of any of the sink microorganisms incubated in the
presence of conidia of C. sativus (5, 105).
We had previously thought that the greater part of the 14C lost from fungal
propagules in soil was by way of exudation (51, 162) (we assumed that the
14C02 was derived mostly from respiration of fungal exudates by soil mi
crobes). Recent findings indicate, though, that more 14C02 is lost by pro
pagule respiration than by microbial respiration of exudates (M. Hyakumachi,
J. L. Lockwood, unpublished results).
Further support for the nutrient-deprivation hypothesis for soil fungistasis
was obtained by experiments demonstrating similar fungal behavior in a
natural soil and in a synthetic soil that was inhibitor-free ( 76 ).
A corollary of the nutrient-sink hypothesis for soil fungistasis is that fungal
propagules with long germination times should be more sensitive to fungista
sis than those with slower germination times, as measured by their germina
tion response in soil to which nutrients were added. This was the case ( 1 6 5). It
also was shown for different fungi that small conidia had longer germination
times than large conida. The same rationale would suggest that hyphae, which
are able to initiate growth immediately after contacting an energy source,
should be less sensitive to fungistasis than spores. This also was verified (82,
1 65). Among hyphae of different fungi, those with narrow hyphae and slow,
early growth rates (on agar) were most fungistasis-sensitive.
Interruption of progress towards germination, by transfer of the spores from
sterile to natural soil, resulted in a gradual regression towards the original
(ground) state (193 ). Loss, via respiration and exudation, of 14C taken up
during germination progress paralled closely the percentage regression.
Thus the extremes of spore size appear to represent different ecological
strategies. Species with large spores tend to germinate rapidly and to exhibit
low sensitivity to fungistasis. They give rise to large hyphae whose early
growth is rapid and relatively uninhibited in soil. These species may be better
adapted to exploit transient resources and thus tend to be more r- than
K-selected. The opposite is true of species with small spores; these also may
regress to the ground state if resources are of insufficient duration for
germination to occur, and they seem to be more K- than r-selected.
1 10 LOCKWOOD
The mechanism by which increased loss of 14C loss in soil leads to the
suppression of germination is not understood. That it represents a loss of
reserve materials essential for germination seems less likely than that it is in
some way a more subtle regulatory mechanism (46 , 1 1 2).
Energy source deprivation also appears to account for pathogen suppression
in environments other than soil, such as the suppressiveness of planting media
containing composted hardwood bark to damping-off caused by P. ultimum
(25, 26). The reduced germination of some fungi on leaf surfaces in the
presence of leaf-inhabiting saprophytes was explained by competition for
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amino acids (4 1 ).
In some soils, volatile or nonvolatile inhibitors of biotic or abiotic origin
may play a role in fungistasis ( 1 10 , 1 1 2 , 1 14). The most likely candidate is
ammonia, which is detectable in some soils of pH > 7.0 ( 1 39, 1 52). Even
ammonia does not occur in all soils, and not all fungi are sensitive to it at the
concentrations at which it occurs. Other possible fungistatic agents are iron
chelating siderophores of microbial origin. Lockwood & Schippers ( 1 1 5 )
could find n o evidence for their role i n fungistasis in two soils, but such
metabolites appear to be involved in the inhibition of growth and germination
of chlamydospores of F. oxysporum in rhizospheres of plants (43 , 1 6 1 ).
However, the rhizosphere is not the arena of the fungistasis phenomenon.
Inhibitory substances might be subsidiary factors superimposed in some
situations on the widespread and pervasive fungistasis imposed by energy
deprivation ( 1 10 , 1 14).
colonized became less germinable, and lysed and died more rapidly than
spores not so colonized (56, 5 7).
Propagules that become debilitated due to energy stress may be invigorated
by exposure to energy-yielding compounds. For example, conidia of C.
sativus recovered a portion of their lost germinability through uptake of a
quantity of an energy substrate too small to support germination (52) , and
exposure of conidia to potato-dextrose agar or to certain sugars restored a
portion of their lost infectivity (3). These results suggest that the energy status
of dormant fungal propagules in soil is dynamic-an ebb and flow
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Autolysis Energy stress also can cause the autolysis of fungal hyphae,
particularly of younger hyphae (9 7) . Autolytic enzymes capable of lysing the
hyphal walls were activated in soil or in the leached-sand model. Hyphal lysis
occurred under conditions that ruled out the participation of enzymes pro
duced by other microorganisms, but the possible involvement of heterolysis in
other circumstances, e.g. breakdown of older hyphae or the digestion of
hyphal remnants following autolysis, remains a possibility. The phenomenon
of lysis needs much more study, for its own sake as well as for its potential
usefulness in biological control of fungal infection ( 112).
Several mechanisms apparently have evolved that help young somatic
hyphae to compensate for their vulnerability to lysis. Lysis of germ tubes
causes death to many but not all propagules. Persistant propagules of some
fungi are able to regerminate several times after lysis of germ tubes in soil
(48 , 82, 1 64) , although at decreasing frequencies. It is important to know if
propagules of other fungi can survive the lysis of germ tubes and germinate
again.
SUPPRESSIVE SOILS The historical origins and current status of this subject
have been described in numerous reviews (e.g. 3 1 , 1 54) , and certain aspects
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have also been discussed elsewhere in this review. Because the many mech
anisms of suppressiveness remain obscure, it is difficult to classify them as
co-actions or substratum interactions. However, it must be emphasized that
the recognition and analyses of the mechanisms involved is an extremely
important aspect of the biology of soilborne plant pathologens. Soils histor
ically suppressive of F. oxysporum ( 1 , 1 60 ) , P . ultimum (72), Phytophthora
cinnamomi ( 1 22), and R . solani (86), among others, have been identified .
Analyses of suppressive soils indicate participation of biotic and abiotic
factors in their suppressive effects , including siderophore-producing bacteria
( 1 2, 9 1 ) , competition for energy sources, ( 1 , 1 1 2) , pH (98), or geologic
origin of a given soil ( 1 66) . Such analyses might suggest ways of making
disease-conducive soils suppressive.
In addition to pre-existing suppressiveness, soils also can become suppres
sive during monoculture of a crop , a phenomenon exemplified by the classic
take-all decline of take-all of wheat (3 1 ) . Declines in root rot of sugarbeet (84)
and common scab of potato ( 12 7) during monoculture of these crops are also
known.
A recent study indicates that the induction of suppressiveness can be
cultivar-specific (78) . In a monoculture of watermelons, most cultivars,
including some resistant ones, wilted severely after 4-5 years owing to F.
oxysporum f. sp. niveum, but the moderately resistant 'Crimson Sweet'
exhibited much less wilt than expected thoughout 7 years of monoculture.
Other cultivars grown in soil previously cropped to Crimson Sweet also had
less wilt than expected, given their known susceptibilities. The population of
the pathogen did not differ in soil cropped to the various cultivars. Why a
single variety only induced suppressiveness is not known.
EPILOGUE
Many topics meriting discussion have not been dealt with here, for example,
environmental effects on pathogens and disease in addition to predisposition
of plants ; the role played in disease by nematode-fungal interactions, mathe
matical modeling of inoculum density-disease relationships and of disease
1 14 LOCKWOOD
development over time, and disease resistance. These omissions are due to
limitations of time and space and the range of the author' s knowledge. I
especially regret not treating concepts having to do with the persistence, i. e .
survi val o f pathogens i n soil. Certain aspects of this subject have been
mentioned in other contexts in this review , but it merits inclusion as a separate
topic.
I hope that this review , even with its limitations, will provide a useful
perspective on the origin and current status of concepts pertaining to soilborne
pathogen s , and that it will serve as a guide to future research and thinking in
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this area.
ACKNOWLEDGMENT
I would like to thank Ralph B aker, Christian Winner, Yaacov Katan, and
Wen-hsiung Ko for critical comments on a previous article ( 1 13 ) that helped
greatly in the preparation of this one.
Literature Cited
1 . Alabouvette, C. 1986. Fusarium-wilt logical Control ofPlant Pathogens. San
suppressive soils from the Chiiteaure Francisco: Freeman
nard region: review of a 10-year study. 9. Baker, R . 1 965. The dynamics of in
Agronomie 6:273-84 oculum. In Ecology of Soil-Borne Plant
2. Andrews, J. H . , Rouse, D. I. 1 982. Pathogens, cd. K. F. Baker, W. C.
Plant pathogens and the theory of r- and Snyder, pp. 395-403. Berkeley: Univ.
K-selection. Am. Naturalist 1 20:283-96 Calif. Press
3 . Arora, D. K. 1988. Effect of microor 10. Baker, R. 1 97 1 . Analyses involving in
ganisms on aggressiveness of Bipolaris oculum density of soil-borne plant
sorokiniana. Can. 1. Bot. In press pathogens in epidemiology. Phytopa
4. Arora, D. K . , Filonow, A. B . , Lock thology 6 1 : 1 280-92
wood, 1. L. 1983. Bacterial chemotaxis 1 1 . Baker, R. 1978. Inoculum potential. In
to fungal propagules in vitro and in soil. Plant Disease: An Advanced Treatise,
Can. 1. Microbiol. 29: 1 1 04-1 1 09 ed. J. O. Horsfall, E. C. Cowling,
5 . Arora, D. K . , Filonow, A. B . , Lock 2 : 1 37-57. New York: Academic
wood, 1. L. 1983 . Exudation from 14C_ 1 2 . Baker, R . , Elad, Y . , Sneh, B. 1986.
labeled fungal propagules in the pres Physical, biological and host factors in
ence of specific microorganisms. Can. iron competition in soils. In Iron, Sider
1. Microbiol. 29: 1 487-92 ophores, and Plant Diseases, ed. T. R.
6. Arora, D. K . , Filonow, A. B . , Lock Swinburne, pp. 77-84. New York:
wood, J. L. 1 985. Decreased Plenum
aggressiveness of Bipolaris sorokiniana 1 3 . Baker, R . , McClintock, D . L. 1965.
conidia in response to nutrient stress. Populations of pathogens in soil.
Physiol. Plant Pathol. 26:1 35-42 Phytopathology 55 :495
7. Atkinson, T. G . , Neal, J. L. Jr. , Larson, 14. Baker, R . , Maurer, C. L . , Maurer, R .
R. I . 1 974. Root rot reaction in wheat: A . 1967. Ecology o f plant pathogens i n
resistance not mediated by rhizosphere soil. VII. Mathematical models and in
or laimosphere antagonists. Phytopa oculum density . Phytopathology 57:
thology 64:97- 1 0 1 662-66
8 . Azad, H. R . , Davis, J. R . , Schnathorst, 1 5 . Bakker, A. W . , Schippers , B . 1 987.
W. C . , Kado, C. I. 1987. Influence of Microbial cyanide production in the rhi
verticillium wilt resistant and susceptible zosphere in relation to potato yield
potato genotypes in populations of an reduction and Pseudomonas spp - medi
tagonistic rhizosphere and rhizoplane ated plant growth-stimulation. Soil Bioi.
bacteria and free nitrogen fixers. Appl. Biochem. 19:451-57
Microbiol. Biotechnol. 26:99-104 16. Barta, A. L . , Schmitthenner, A. F.
8a. Baker, K. F. , Cook, R. J. 1 974. 8io- 1986. Interaction between flooding
CONCEPTS OF SOILBORNE PATHOGENS 1 15
stress and Phytophthora root rot among 30. Colhoun, J. 1 979. Predisposition by the
alfalfa cultivars. Plant Dis. 70: 3 1 0-- 1 3 environment. In Plant Pathology - A n
1 7 . Barnett, H . L . , B inder, F. L . 1983. the Advanced Treatise, ed . J. G . Horsfall ,
fungal host-parasite relationship. Ann. E . B . Cowling. 4:75-96. New York:
Rev. Phytopathol. 1 1 : 273-92 Academic
1 8 . Benson, D. M . , Baker, R. 1 974. 3 1 . Cook, R. J . , Baker, K. F. 1 98 3 . The
Epidemiology of Rhizoctonia solani pre Nature and Practice of Biological Con
emergence damping-off of radish: in trol of Plant Pathogens. SI. Paul, Minn:
oculum potential and disease potential Am. Phytopathol. Soc.
interaction. Phytopathology 64:957-62 32. Cook, R. J . , Snyder, W. C . 1 965. Car
1 9 . Beute, M. K . , Lockwood, J. L. 1 968. bon and nitrogen compounds and the
Mechanism of increased root-rot in germination of chlamydospores of
virus-infected peas. Phytopathology 58: Fusarium solani f. sp. phaseoli.
Access provided by Punjab Agricultural University on 04/05/16. For personal use only.
Annu. Rev. Phytopathol. 1988.26:93-121. Downloaded from www.annualreviews.org
44. Elad, Y . , Chet, I. 1987. Possible role of survival in soil. Can. J. Plant Pathol.
competition for nutrients in biocontrol of 7 : 1 9-27
Pythium damping-off by bacteria. 58. Fiirsch, H . , Winner, C. 1987. Un
Phytopathology 77: 1 90-95 tersuchung von Ackerboden auf das In
45. Elliott, L. F . , Lynch, 1. M . 1984. okulumpotential von pilzlichen Wurzel
Pseudomonads as a factor in the growth parasiten der Zuckerriibe. Zuckerindus
of winter wheat (Triticum aesrivum L.). trie 1 1 2:2 1 7-22, 292-97
Soil Bioi. Biochem . 1 6:69-71 59. Garrett, S. D. 1956. Biology of Root
46. Epstein, L . , Lockwood, 1. L. 1 983. The Infecting Fungi. Cambridge: Cambridge
role of exudation in the germination of Univ. Press
Cochliobolus victoriae conidia. J. Gen. 60. Garrett, S. D. 1959. Biology and ecolo
Microbiol. 1 29:3629-35 gy of root-disease fungi. In Plant Pa
47 . Epstein, L . , Lockwood, J. L. 1984. thology: Problems and Progress. 1 908-
Access provided by Punjab Agricultural University on 04/05/16. For personal use only.
Annu. Rev. Phytopathol. 1988.26:93-121. Downloaded from www.annualreviews.org
infectivity and virulence on bean seed cepivorum Berk. Ann. Appl. Bioi. 64:
lings. Phytopathology 60: 1 35 1-56 303- 1 4
75. Henry , A. W. 1 93 1 . The natural micro 90. Kirk, J . J . 1 984. Ability o f Gaeuman
flora of the soil in relation to the foot-rot nomyces graminis to benefit from
problem of wheat. Can. J. Res. 4:69-77 senescence of the cereal root cortex dur
76. Ho, W . C . , Ko, W . H. 1986. Micro ing infection. Trans. Br. Mycol. Soc.
biostasis by nutrient deficiency shown in 82: 107- 1 1
natural and synthetic soils. 1. Gen. Mi 91. Kloepper, J . W . , Leong, J . , Teintze,
crobiol. 1 32:2807- 1 5 M . , Schroth, M. N . 1 980. Pseudomonas
7 7 . Hoch, H . c . , Fuller, M . S . 1 977. siderophores: a mechanism explaining
Mycoparasitic relationships. I . Morpho disease-suppressive soils. Curro Micro
logical features of interactions between bioi. 4 : 3 1 7-20
Pythium acanthicum and several fungal 92. Kloepper, J. W . , Schroth, M. N. 1 98 1 .
Access provided by Punjab Agricultural University on 04/05/16. For personal use only.
1 6 1 . Sneh, B . , Dupler, M . , Elad, Y . , B aker, 4 1-52. Taipei: Taiwan Agr. Res. Inst.!
R . 1984. Chlamydospore germination of Plant Prot. Soc . , Republic of China
Fusarium oxysporum f. sp. cucumeri 1 74 . Van der Plank, J. E. 1975. Principles oj
num as affected by fluorescent and lytic Plant Injection . New York: Academic
bacteria from Fusarium-s uppressive 1 75 . Waksman , S. A. 1944. Three decades
soil. Phytopathology 74: 1 1 1 5- 1 1 24 with soil fungi. Soil Sci. 58:89-1 1 5
1 62 . Sneh, B . , Lockwood, J. L. 1 975. Quan 1 76. Waksman, S . A . 1 952. Soil Microbiolo
titative evaluation of the microbial nutri gy. New York: Wiley
ent sink in soil in relation to a model 1 77 . Weinhold, A. R . , Bowman, T . , Dod
system for soil fungistasis. Soil BioI. man, R. L. 1 969 . Virulence of Rhizocto
Biochem. 8:65-69 nia solani as affected by nutrition of the
163. S nyder, W. c . , Schroth, M . N . , Christ pathogen. Phytopathology 59: 1601-
ou, T. 1 959. Effect of plant residues on 1 605
Access provided by Punjab Agricultural University on 04/05/16. For personal use only.