Professional Documents
Culture Documents
Author:
Thomas Fekete, MD
Section Editor:
Stephen B Calderwood, MD
Deputy Editor:
Allyson Bloom, MD
All topics are updated as new evidence becomes available and our peer review process is complete.
Literature review current through: Apr 2020. | This topic last updated: Mar 05, 2020.
including diagnostic and therapeutic reasons, as well as for convenience. The presence
of a catheter increases the risk of bacteriuria, which can be clinically benign or progress
to serious infection. There is an overall lack of consensus about the optimal approach to
catheter-associated urinary tract infections (UTIs), apart from removing catheters when
no longer necessary.
Issues related to asymptomatic bacteriuria and cystitis in other circumstances, and the
indications for placement, methods of catheterization, and management and
complications of bladder catheters are discussed separately. (See "Asymptomatic
bacteriuria in adults" and "Acute simple cystitis in women" and "Acute simple cystitis in
men" and "Placement and management of urinary bladder catheters in
adults" and "Complications of urinary bladder catheters and preventive
strategies" and "Acute complicated urinary tract infection (including pyelonephritis) in
adults".)
These definitions are different from those used by the United States Centers for
Disease Control and Prevention (CDC) National Health Safety Network (NHSN), which
were created for surveillance purposes, not specifically for clinical care [2]. The NHSN
uses the same basic definition for asymptomatic bacteriuria but defines catheter-
associated UTI as the presence of fever, suprapubic tenderness, or costovertebral
angle pain in the setting of urine culture with bacterial counts ≥10 5 cfu/mL of no more
than two organism species (and does not include fungal isolates or minor pathogens).
The NHSN definition does not allow for other attribution of fever, so it may overestimate
the rate of clinically relevant catheter-related bacteriuria [3]. Furthermore, because the
NHSN definition sometimes changes, it can be difficult to compare infection rates
across time. As an example, one hospital-based study noted that the measured
infection rate as determined retroactively by the updated definition fell by half compared
with the rate reported using the old definition [4].
The NHSN definitions also make attempts to distinguish between hospital-acquired and
pre-existing UTIs in order to allow attribution to the institution where the urine was
collected or to another facility.
EPIDEMIOLOGY
Rarely, there can be purple discoloration of the urine, collecting bag, and tubing (the
purple urine bag syndrome) [21]. The purple color of the urine is due to metabolic
products of biochemical reactions formed by bacterial enzymes in the urine.
Gastrointestinal tract flora break down the amino acid tryptophan into indole, which is
subsequently absorbed into the portal circulation and converted into indoxyl sulfate.
Indoxyl sulfate is then excreted into the urine, where it can be broken down into indoxyl
if the appropriate alkaline environment and bacterial enzymes (indoxyl sulfatase and
indoxyl phosphatase) are present. The breakdown products, indigo and indirubin,
appear blue and red, respectively [22,23]. Bacteria capable of producing these enzymes
include Providencia spp, Klebsiella, and Proteus.
MICROBIOLOGY
Ambulatory patients with indwelling catheters tend to acquire urinary bacteria similar to
those found in hospitalized patients rather than the types usually seen in the outpatient
setting. Prolonged catheterization can be associated with polymicrobial bacteriuria or
changing urinary flora.
CLINICAL FEATURES
Patients with spinal cord injury may have especially atypical and nonspecific symptoms,
including increased spasticity, malaise/lethargy, and autonomic dysreflexia. Individuals
who develop UTI soon after removal of a catheter may be more likely to have the typical
urinary symptoms of dysuria, frequency, and urgency.
Many patients believe that a cloudy appearance or foul smell of the urine is suggestive
of the presence of a UTI. However, neither of these findings has been demonstrated to
be clearly associated with either bacteriuria or a UTI [1,26].
Rarely, purple discoloration of the urine, collection bag, and tubing (purple urine bag
syndrome [PUBS]) can occur due to metabolic byproducts of certain bacteria that may
be present in the system [21]. Risk factors include bacteriuria, constipation, and female
gender. PUBS is benign and has not been demonstrated to have any implication other
than the possibility of a UTI. (See 'Pathogenesis' above.)
Laboratory findings — Pyuria is a common finding in catheterized patients with
bacteriuria, whether they are symptomatic (ie, have UTI) or not. However, in a series of
761 catheterized patients, quantitative urine WBC >10 cells/microL had low sensitivity
for predicting growth of >105 colony forming units (cfu)/mL (47 percent) [27]. Specificity,
on the other hand, was 90 percent. The vast majority of these patients had no
symptoms attributable to UTI.
By definition, all patients with catheter-associated UTI have bacteriuria or funguria. The
vast majority of patients with symptomatic bacteriuria (ie, UTI) have bacterial culture
growth ≥105 cfu/mL or fungal growth in urine, although occasionally bacterial counts as
low as 102 cfu/mL have also been described in individuals with UTI in the absence of a
catheter [28,29]. The frequency of low count bacteriuria in the setting of catheter-
associated UTI is not clearly defined but expected to be very low [1,26]. The spectrum
of associated pathogens is discussed elsewhere. (See 'Spectrum of organisms' above.)
DIAGNOSIS
Consistent findings may be specific to the urinary tract (eg, costovertebral angle
tenderness) or may be more general, such as fever, leukocytosis, fall in blood pressure,
metabolic acidosis, or respiratory alkalosis. If the diagnosis is based on such
nonspecific findings, the evaluation should rule out the possibility of other infections (eg,
bacteremia, pneumonia, skin or soft tissue infection) prior to attributing them to a
catheter-associated UTI.
Because the symptoms and signs of catheter-associated UTI can be nonspecific, a fair
amount of clinical judgment and individualization is required. Older or debilitated
patients often present with nonspecific signs or symptoms, such as falls, change in
functional status, and change in mental status. Because older catheterized patients
often have bacteriuria, these findings have traditionally been attributed to UTI in such
patients. However, growing evidence indicates that these are not reliable predictors of
bacteriuria or UTI, and treatment for bacteriuria does not improve these symptoms [30-
32]. Thus, we do not routinely test urine in such patients in the absence of focal urinary
tract symptoms or systemic signs of infection (eg, fever), and instead hydrate, correct
metabolic abnormalities, and assess other potential contributing factors.
(See "Approach to infection in the older adult", section on 'Urinary tract infection'.)
The vast majority of patients with catheter-associated UTI have counts ≥10 5 cfu/mL.
Thus, when the level of bacteriuria is lower, other potential explanations for the
presenting symptoms should be evaluated before diagnosing a catheter-associated UTI,
particularly if the symptoms are nonspecific or the isolated organisms are not
Enterobacteriaceae.
Certain findings, such as pyuria and the appearance or smell of the urine, should not be
used to diagnose a UTI when found in isolation. Pyuria is frequently found in
catheterized patients with bacteriuria, whether they have symptoms or not, and odorous
or cloudy urine has not been demonstrated to be indicative of either bacteriuria or UTI.
On the other hand, the absence of pyuria in a symptomatic catheterized patient
suggests a diagnosis other than UTI. (See 'Clinical features' above.)
Many systems have a "needleless" site that can be cleansed prior to specimen
collection. If a sample is being collected without catheter removal, urine should be
obtained from the port in the drainage system (figure 1) [33]. For circumstances in which
the above approaches are not possible, the culture should be obtained by separating
the catheter from the drainage system. Although this approach is associated with some
risk of introducing microbes into the closed system, culture results from urine collected
from the drainage bag cannot be used to guide treatment.
In the setting of condom catheters, it can be difficult to distinguish true infection from
skin and mucosal contamination [17,34]. In these cases, a clean catch midstream
specimen should be obtained, or urine should be collected from a freshly applied
condom catheter after cleaning the glans [34]. (See "Sampling and evaluation of voided
urine in the diagnosis of urinary tract infection in adults".)
Some patients, in particular those who have recently had catheter removal, present with
isolated symptoms of cystitis (eg, dysuria, urinary frequency or urgency) in the absence
of fever or features of ascending infection or prostatitis. Such patients can be managed
as having acute simple cystitis. (See "Acute simple cystitis in women" and "Acute
simple cystitis in men".)
Antibiotic selection for both acute complicated UTI and acute simple cystitis takes into
account risk factors for resistant infection (informed by past urine cultures, use of
antimicrobial therapy, health care exposures, community prevalence of antimicrobial
resistance) and antibiotic allergies.
Once culture and susceptibility results are available, the antimicrobial regimen should
be tailored to the specific organism isolated. The approach to management
of Candida UTIs is discussed elsewhere. (See "Candida infections of the bladder and
kidneys", section on 'Treatment'.)
The optimal duration of therapy is uncertain. Depending on the clinical response, the
infecting organism, and the agent used for treatment, 7 to 14 days of therapy is
generally appropriate (with use of the longer end of this range for patients who respond
slowly) [1]. Oral therapy can be used for some or all of the treatment course if the
organism is susceptible and the patient is well enough to take oral medication with
adequate absorption.
Intermittent catheterization is associated with a lower rate of bacteriuria and UTI than
long term indwelling catheterization [37]. If long term catheterization is needed and
intermittent catheterization is not feasible, the catheter should be replaced at the
initiation of antimicrobial therapy [38]. Catheter replacement is associated with fewer
and later relapses than retaining the original catheter, as biofilm penetration of most
antimicrobials is poor [39].
tract infections (UTIs) include sepsis, bacteremia, and involvement of the upper urinary
tract.
guidelines from selected countries and regions around the world are provided
separately. (See "Society guideline links: Urinary tract infections in adults".)
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a midstream specimen. If ongoing catheterization is needed, ideally the catheter should be replaced
prior to collecting a urine sample for culture, to avoid culturing bacteria present in the biofilm of the
catheter but not in the bladder. Many systems have a "needleless" site that can be cleansed prior to
specimen collection. If a sample is being collected without catheter removal, urine should be obtained
from the port in the drainage system. For circumstances in which the above approaches are not
possible, the culture should be obtained by separating the catheter from the drainage system.
Although this approach is associated with some risk of introducing microbes into the closed system,
culture results from urine collected from the drainage bag cannot be used to guide treatment.
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