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Spatiotemporal Evolution of Dengue Outbreaks in Brazil
Spatiotemporal Evolution of Dengue Outbreaks in Brazil
ORIGINAL ARTICLE
∗,†,b
Thiago S. de Azevedo†,a , Camila Lorenz , and Francisco Chiaravalloti-Netob
a
Secretary of Health, Municipality of Santa Barbara d’Oeste - Santa Bárbara d´Oeste, 13450-021, Sao Paulo, Brazil; b Department
of Epidemiology, School of Public Health, Universidade de São Paulo, 01246-904, Sao Paulo, Brazil
∗ Corresponding author: Tel: +55(11)30617920; E-mail: camilalorenz@usp.br
Received 26 June 2019; revised 3 October 2019; editorial decision 12 April 2020; accepted 22 April 2020
Background: Dengue is a mosquito-borne febrile disease infecting millions of people worldwide. Identification
of high-risk areas will allow public health services to concentrate their efforts in areas where outbreaks are most
likely to occur. The present study focuses on describing the spatiotemporal evolution of dengue outbreaks in
Brazil from 2000 to 2018.
Method: To assess the pattern behaviour and spatiotemporal trend of dengue outbreaks, the non-parametric
kernel estimator method and the Mann–Kendall test, respectively, were used. Bivariate global Moran’s I statistic
was used to test the spatial correlation between dengue outbreaks, temperature, precipitation and population
data.
Results: Our results revealed that the transmission cycles of dengue outbreaks vary in different spatiotemporal
scenarios, with intermittent periods of outbreaks. In the period of study, outbreak clusters were primarily con-
centrated in the Northeast region and the transmission of dengue extended throughout Brazil until 2018. The
probability of occurrence of dengue outbreaks was higher in high temperatures. Further, these space-time fluc-
tuations in the number of outbreaks in the different regions were probably related to the high mobility between
the populations of these regions, circulating serotypes and susceptible populations.
Conclusions: The distribution of dengue outbreaks is not random; it can be modified by socioeconomic and
climatic moving boundaries.
Keywords: Brazil, dengue outbreak, Mann–Kendall analysis, non-parametric kernel estimator method
Introduction diseases are usually clustered in high-risk areas7 ; thus, the recog-
nition of these high-risk areas can support surveillance and con-
Dengue is a flaviviral disease caused by four serotypes of dengue trol measures by focusing expenditure of limited resources where
virus (DENV 1–4), which are vectored mainly by Aedes aegypti they are most likely to have an impact. Dengue transmission, in
and Aedes albopictus mosquitoes.1 This vector-borne disease is particular, shows dynamic spatiotemporal patterns because of
the most prevalent in the Americas and the second most preva- the variable environment and different immunological profiles
lent globally; there are about 50–100 million new dengue cases of the population.5 This characteristic non-homogeneous and
in tropical and subtropical regions annually.2 It is estimated that unstable distribution of potentially important predictors makes
about 3.9 billion people are at risk of dengue infection worldwide it difficult to assign epidemiological changes to specific factors.
each year.3 In 2016, 802 249 new cases of dengue fever were Despite complexities, an analysis of the distribution of dengue
reported in Brazil alone, affecting all regions except the South.4 outbreaks can be helpful in determining the spatiotemporal dis-
Many municipalities have climatic and socioeconomic conditions tribution of dengue.7 In Brazil, recognition of high-risk areas will
that are conducive to the proliferation and vectorial capacity of allow public health services to concentrate their efforts toward
A. aegypti and, consequently, dengue outbreaks. areas where outbreaks are most likely to occur.
The rapid development of geographic information systems In light of this situation, in this study, we analysed the spa-
(GISs) has led to an increase in the importance of spatial data tiotemporal distribution of dengue fever outbreaks that occurred
analysis in infectious disease epidemiology.5,6 Mosquito-borne
© The Author(s) 2020. Published by Oxford University Press on behalf of Royal Society of Tropical Medicine and Hygiene.
All rights reserved. For permissions, please e-mail: journals.permissions@oup.com
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T. S. de Azevedo et al.
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Transactions of the Royal Society of Tropical Medicine and Hygiene
Figure 2. Historical evolution of dengue outbreaks in Brazil from 2000 to 2018. The red arrows indicate the years with the highest number of munici-
palities that registered outbreaks.
dengue in our 19-y study period. Moran’s I ranges from −1 to 1 tribution (p) for which the parameters of significance could be
and can be interpreted as follows: a value close to 0 indicates computed. These parameters were calculated from 999 random
spatial randomness, while a positive value indicates positive permutations of Moran I values from the correlation of dengue
spatial autocorrelation and a negative value indicates nega- outbreaks.
tive spatial autocorrelation.5 The Moran indices were calcu-
lated by means of a neighbourhood-matrix W, applying the
same approach as Hu et al.5 and Castillo et al.15 In order to
obtain W, the criterion of ‘common border’ is used, in which
Results
research areas with a common border are considered neigh- During the period from 2000 to 2018, Brazil recorded dengue out-
bours. Local indicators of spatial association (LISA) analysis was breaks in several municipalities. Since the beginning of transmis-
used to identify high-high and low-low groups of municipalities sion, the greatest outbreaks occurred in 2010, 2013 and 2015
(referred to as spatial clusters). High-high refers to municipali- (Figure 2).
ties with high dengue incidence that are surrounded by neigh- Figure 3 depicts the geographic distribution of kernel esti-
bouring municipalities with high dengue incidence and low-low mates of dengue outbreaks in Brazil in this 19-y period. It shows
refers to municipalities with low dengue incidence that are sur- that the occurrence of outbreaks varied geographically across
rounded by neighbouring municipalities with low dengue inci- the country and that dengue has been expanding its trans-
dence: these are indicative of positive spatial autocorrelation.5 mission area across almost the entire Brazilian territory, con-
Bivariate local and global Moran’s I statistics were used to identify solidating as hyperendemic along the east coast and the cen-
spatial correlations between dengue outbreaks with climatic vari- tral regions. The incidence rates of each municipality can be
ables and population data. Temperature and precipitation data seen in Supplementary Figure 1. Even with this variation, it is
were obtained from WorldClim16 representative of the last 50 y possible to notice that the largest number of outbreaks was
(measured monthly) and interpolated at a resolution of 30 arc-s always concentrated in the Northeast, Southeast and Central-
(approximately 1 km). Population data for each municipality were West regions of the country. Before 2006, the vast majority of
obtained from the Instituto Brasileiro de Geografia e Estatística dengue outbreaks were in northeastern municipalities. By 2006,
(IBGE) 2010 Population Census.17 The statistical significances of there was an increase in dengue outbreaks in the Southeast
Moran indices were calculated from the permutation distribution and Midwest. Variographic analysis showed two distinct patterns:
(999) of the value for other areas, until obtaining a pseudo dis- one from 2000 to 2004 (C—C0 < 0.005) and the other from
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T. S. de Azevedo et al.
Figure 3. Kernel estimator method of dengue outbreak pattern behaviour in Brazil from 2000 to 2018. The red areas represent where the outbreaks
are concentrated.
2005 to 2018 (C—C0 > 0.008), mainly because of the nugget outbreaks, whereas Goiânia (Goiás) reported a strong increasing
effect (Supplementary Figures 2 and 3). The nugget effect is a spatial trend of dengue outbreaks during the study period.
geostatistical term used to describe the variability seen between Figure 6 shows the spatial correlation between dengue out-
samples that are closely spaced. From 2000 to 2004 outbreaks breaks and average temperature, daytime temperature varia-
were geographically restricted; there was little spatial correlation tion, precipitation seasonality and population density; only the
between them. However, it is possible to observe that the munici- last was not significant. Interpreting the LISA results, if a clus-
palities which experienced outbreaks had high spatial correlation ter is high-high, there is evidence for neighbouring regions with
after 2005. a high number of dengue fever cases. Clusters that are classi-
The Mann–Kendall analysis showed how the occurrence of fied as low-low show neighbouring regions with a low number of
outbreaks changed in each area over time (Figure 4). Both positive dengue fever cases. The bivariate local Moran analyses revealed
(increased number of outbreaks) and negative (decreased num- high-high and low-low spatial clusters based on temperature and
ber of outbreaks) trends were observed. These dynamics indicate precipitation, and the Southeast and Midwest regions of the
a clear non-random spatiotemporal pattern of spread in specific country in particular presented coincident high-risk areas for
regions of the country, mainly concentrated in the Southeast and all variables, namely, high average temperature, high day-
Midwest regions, with some hotspots in the Northeast and North. time temperature variation and high precipitation seasonality
With this analysis, it was also possible to estimate the trend of (Figure 7). These conditions make these areas most favourable
occurrence in the capitals of each Brazilian state (Figure 5). Natal for the occurrence of epidemic outbreaks. Finally, we built a map
(Rio Grande do Norte) showed the highest trend of decreasing relating all significant variables to dengue outbreaks (Figure 8)
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T. S. de Azevedo et al.
Figure 5. Mann–Kendall spatial trend estimates for dengue outbreaks in each of the 27 Brazilian state capitals from 2000 to 2018. The blue bars
represent a decrease in dengue outbreaks, whereas the red bars represent an increase.
almost the entire Brazilian territory, consolidating as a hyper- of the end of the Superintendence of Public Health Campaigns
endemic disease along the east coast and the central regions. (SUCAM) and the decentralization of monitoring actions for vector
These are essentially well-connected areas, and they play a outbreaks by surveillance officers, there was a partial break in the
fundamental role in the maintenance and propagation of out- continuity of actions. When dengue rates began to increase
breaks27 due to several combined factors such as propitious again, some actions were resumed, although only occasionally,
mosquito reproduction (heat islands),28 human interactions, to combat outbreaks or during the peak months of the epi-
enhanced virus dispersal, high levels of immigration and popu- demic. Another important factor was the failure of implemen-
lation growth.20 It is known that the transmission of arboviruses tation of the sanitary network (water and sewage) throughout
is more common in overpopulated regions,29 which is con- the country. In 2007, the intended expansion of the sewage
sistent with the low incidence of dengue in most Amazon system by the Growth Acceleration Program (PAC) to meet the
areas. In Brazil, rapid and unplanned urbanisation results in Millennium Development Goals did not occur as scheduled.’
problems such as inadequate garbage disposal and poor san- These factors may have contributed to the dissemination of out-
itary conditions. Estallo et al.30 highlighted the importance of breaks throughout the country. Additionally, this influences the
both local socioeconomic and demographic studies, as well as distribution of other diseases transmitted by A. aegypti, such as
the initiation of city cleaning campaigns, to reduce the avail- Zika and Chikungunya.31
ability of man-made containers in public places to decrease Dengue outbreaks are also related to environmental factors.
mosquito infestation. Further, other studies have confirmed We observed that dengue outbreaks were fewer or absent in
that the high-risk areas for dengue are where the female areas with low temperatures (southern regions). It is known
mosquito finds favourable conditions to feed and reproduce: that mosquito development and reproduction rates are impaired
urbanised areas with high population density, with informal set- at temperatures below 20°C and, consequently, the number of
tlements, and in places with unsatisfactory sanitation condi- dengue cases is reduced.32 Moreover, our study results suggest
tions.24 These specific areas likely contribute most to the dis- that forested areas may be less susceptible to A. aegypti inva-
persion of arboviruses in metropolises. According to Rodrigues sions, which likely explains the low incidence of dengue in most
et al.,24 ‘in recent decades, government policies aimed at the pre- northern areas. Similar findings were reported by Nakhapakorn
vention of arboviruses have been fragmented. In 1990, because and Tripathi,33 who revealed that urbanised areas have the
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Transactions of the Royal Society of Tropical Medicine and Hygiene
Figure 6. Bivariate correlation between dengue outbreaks and (A) average temperature, (B) daytime temperature variation, (C) precipitation season-
ality and (D) population density for each Brazilian municipality (2000–2018). Moran’s I value represents spatial correlation between dengue outbreaks
with each variable; the p-value indicates its significance (p < 0.001). Confidence intervals for the Moran’s I statistics ranged from 0.9 to 0.99.
highest positive influence on dengue fever, whereas forest areas In this study, we mapped the most probable areas for the
have no influence. Carbajo et al.34 studied a municipality of occurrence of outbreaks in Brazil (Figure 4), but this scenario may
Argentina and showed that all autochthonous dengue cases change with the gradual increase in the average temperature.
occurred in the urban environment with no sylvan cases. How- Currently, the climate of most Brazilian regions provides a suitable
ever, with increasing deforestation and subsequent urbanisation habitat for A. aegypti, which is widely dispersed throughout much
of the Amazon region, the A. aegypti mosquito has found an of the Brazilian territory. Aedes aegypti has been reported to be
ideal spot for the reproduction and spread of the dengue virus in present in 5172 of the 5494 municipalities in Brazil.38 Neverthe-
non-immunised human populations. It is also worth noting the less, there are areas where, although the vector is present, there
sylvatic cycle of the dengue virus. In Brazil, the sylvatic vector is no outbreak of dengue. Higher temperatures may influence the
Haemogogus leucocelaenus was found to be infected with DENV- replication and survival of the virus, extrinsic incubation period of
1.35 In another study carried out in the Atlantic Forest of Bahia, a virus in the mosquito, susceptibility of the vector to viruses and
non-human primates were found with antibodies for DENV-1 and seasonality of virus transmission patterns,39 thus increasing out-
2, and sloths (Bradypus torquatus) had antibodies for DENV-3.36 breaks in unexpected regions.
Therefore, despite not clearly being shown, it is possible that syl- Our results must be considered in the context of a number
vatic cycles of DENV occur in Brazil, although more studies are of assumptions and data limitations. First, because of high
required to prove this hypothesis.37 demand and an inadequate number of health services and
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T. S. de Azevedo et al.
Figure 7. Bivariate local Moran’s I of spatial association between dengue outbreaks and (A) average temperature, (B) daytime temperature variation
and (C) precipitation seasonality. The areas shaded in red (high-high) and blue (low-low) had a positive spatial correlation with dengue outbreaks.
Figure 8. Bubble chart and parallel coordinate plot showing multiple comparisons among three variables (average temperature, daytime temperature
variation and precipitation seasonality) with the number of dengue outbreaks in Brazil. The size of each bubble represents the number of outbreaks.
STD = Standard deviation. The maps were built with GeoDa software.
professionals, not all dengue cases are reported, especially dur- has decreased over time. During the study period, clusters of
ing major outbreaks. Second, we did not consider that mosquito outbreaks were primarily concentrated in the Northeast region
control measures could vary between different areas and munic- followed by the expansion of transmission of dengue fever in
ipalities or with time, and this may dramatically affect the prob- Brazil until 2018. Our results indicate there is an enhanced risk
ability of occurrence of dengue outbreaks. Similarly, the quality of dengue outbreaks when conditions of high average tempera-
of surveillance and clinical case detection may differ over time. tures and high daytime temperature variation are both satisfied,
Further studies are needed to determine the key socioecological which likely explains the low incidence of dengue in the southern
factors (e.g. social, vegetation and mosquito density) that affect areas (milder temperatures). This is probably related to the life
the transmission patterns of dengue outbreaks. Stewart-Ibarra cycle of the A. aegypti vector, which is extremely well-adapted
and Lowe40 showed that local climate, vector densities and the to the urban environment and requires high temperatures for
number of serotypes circulating influence interannual variabil- its reproduction. The Mann–Kendall analysis showed both pos-
ity in dengue fever transmission in southern coastal Ecuador, itive and negative trends in Brazilian state capitals, and the
highlighting the importance of considering both climate and non- probability of occurrence of dengue outbreaks are mainly con-
climate information in developing predictive models for dengue. centrated in Southeast and Midwest regions, with some hotspots
The current findings have shown that the transmission in Northeast, North and South regions. Although these maps
cycles of dengue outbreaks vary in different spatiotemporal are preliminary and can be modified by socioeconomic and cli-
scenarios and that the geographic distribution of the outbreaks matic moving boundaries, the variations are not random. These
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Transactions of the Royal Society of Tropical Medicine and Hygiene
findings suggest that further improvement in our understanding 11 Brady OJ, Smith DL, Scott TW et al. Dengue disease outbreak defini-
of the impact of socioenvironmental change and ecosystem tions are implicitly variable. Epidemics. 2015;11:92–102.
stress upon the transmission of dengue fever and development 12 Mann HB. Nonparametric tests against trend. Econometrica.
of control strategies is needed. 1945;2:245–59.
13 Kendall M. Multivariate Analysis. London, UK: Charles Griffin &
Company, 1975.
Supplementary data 14 Neeti N, Eastman JR. A contextual Mann Kendall approach for the
assessment of trend significance in image time series. Trans GIS.
Supplementary data are available at Transactions online. 2011;15:599–611.
15 Castillo KC, Körbl B, Stewart A et al. Application of spatial analysis to
the examination of dengue fever in Guayaquil, Ecuador. Procedia Env-
iron Sci. 2011;7:188–93.
Authors’ contributions: TSA, CL and FCN conceived the study. TSA car- 16 Hijimans RJ, Camaron S, Parra J et al. Very high resolution interpolated
ried out data analysis. CL drafted the manuscript. TSA and FCN criti- climate surfaces for global land areas. Int J Climatol. 2005;25:1965–
cally revised the manuscript for intellectual content. All authors read and 78.
approved the final manuscript.
17 IBGE. Instituto Brasileiro de Geografia e Estatística. Available from:
https://censo2010.ibge.gov.br/ [accessed May 12, 2019].
Acknowledgements: We especially thank the anonymous referees for
helpful suggestions that greatly improved this manuscript. 18 Osanai CH, Rosa APDAT, Tang AT et al. Surto de dengue em Boa Vista,
Roraima. Rev lnst Med Trop. 1983;25:53–4.
Funding: This work was supported by São Paulo Research Foundation 19 Nogueira RMR, Araújo JMGD, Schatzmayr HG. Dengue viruses in Brazil,
(FAPESP) [grant number 2017/10297–1]. 1986-2006. Rev Panam Salud Publica. 2007;22:358–63.
20 Barcellos C, Lowe R. Expansion of the dengue transmission area in
Competing interests: None declared. Brazil: the role of climate and cities. Trop Med Int Health. 2014;19:159–
68.
Ethical approval: Not required. 21 Robert MA, Tinunin DT, Benitez EM et al. Arbovirus emergence in the
temperate city of Córdoba, Argentina, 2009-2018. Sci Data. 2019;6:
1–6.
22 Carbajo AE, Cardo MV, Vezzani D. Is temperature the main cause of
dengue rise in non-endemic countries? The case of Argentina. Int J
References Health Geogr. 2012;11:26–32.
1 Gubler DJ. Epidemic dengue/dengue hemorrhagic fever as a pub- 23 Cummings DA, Irizarry RA, Huang NE et al. Travelling waves in
lic health, social and economic problem in the 21st century. Trends the occurrence of dengue haemorrhagic fever in Thailand. Nature.
Microbiol. 2002;10:100–3. 2004;427:344–57.
2 Chowell G, Cazelles B, Broutin H et al. The influence of geographic and 24 Rodrigues NCP, Lino VTS, Daumas RP et al. Temporal and spa-
climate factors on the timing of dengue epidemics in Perú, 1994-2008. tial evolution of dengue incidence in Brazil, 2001-2012. PloS One.
BMC Infect Dis. 2011;11:164–9. 2016;11:e0165945.
3 Brady OJ, Gething PW, Bhatt S et al. Refining the global spatial limits 25 Anderson R, King AD, Innis BL. Correlation of E protein binding with cell
of dengue virus transmission by evidence-based consensus. PLoS Negl susceptibility to dengue 4 virus infection. J Gen Virol. 1992;73:2155–9.
Trop Dis. 2012;6:e1760.
26 Bennett SN, Drummond AJ, Kapan DD et al. Epidemic dynamics
4 Brazilian Ministry of Health. Available from: http://www.saude.gov. revealed in dengue evolution. Mol Biol Evol. 2009;27:811–8.
br/saude-de-a-z/dengue/situacao-epidemiologica-dados [accessed
27 Haggett P. The Geographical Structure of Epidemics. Oxford, UK:
January 3, 2019].
Oxford University, 2000.
5 Hu W, Clements A, Williams G et al. Spatial patterns and socioeco-
28 Azevedo TS, Bourke BP, Piovezan R et al. The influence of urban heat
logical drivers of dengue fever transmission in Queensland, Australia.
islands and socioeconomic factors on the spatial distribution of Aedes
Environ Health Perspect. 2010;120:260–6.
aegypti larval habitats. Geospat Health. 2018;13:1–8.
6 Estallo EL, Más G, Vergara-Cid C et al. Spatial patterns of high Aedes
29 Ribeiro AF, Marques GR, Voltolini JC et al. Association between
aegypti oviposition activity in northwestern Argentina. PloS One.
dengue incidence and climatic factors. Revista de Saude Publica.
2013;8(1):e54167.
2006;40:671–6.
7 Estallo EL, Carbajo AE, Grech MG et al. Spatio-temporal dynamics
30 Estallo EL, Sangermano F, Grech M et al. Modelling the distribution of
of dengue 2009 outbreak in Córdoba City, Argentina. Acta Tropica.
the vector Aedes aegypti in a central Argentine city. Med Vet Entomol.
2014;136:129–36.
2018;32:451–61.
8 SINAN. Sistema de Informação de Agravos de Notificação. Available
31 Aguiar BS, Lorenz C, Virginio F et al. Potential risks of Zika and
from: http://portalsinan.saude.gov.br/ [accessed October 10, 2018].
chikungunya outbreaks in Brazil: A modelling study. Int J Infect Dis.
9 Azevedo TSD, Sallum MAM. The Use of Geographic information sys- 2018;70:20–9.
tems in the determination of areas at risk of dengue in the São Paulo
32 Tun-Lin W, Burkot TR, Kay BH. Effects of temperature and larval
state. Geospat Health. 2017;42:23–9.
diet on development rates and survival of the dengue vector Aedes
10 Fotheringham AS, Brunsdon C, Charlton M. Quantitative Geography: aegypti in north Queensland, Australia. Med Vet Entomol. 2000;14:
Perspectives on Spatial Data Analysis. London, UK: Sage, 2000. 31–7.
9
T. S. de Azevedo et al.
33 Nakhapakorn K, Tripathi NK. An information value-based analysis of 37 Figueiredo LTM. Human urban arboviruses can infect wild animals
physical and climatic factors affecting dengue fever and dengue and jump to sylvatic maintenance cycles in South America. Front Cell
haemorrhagic fever incidence. Int J Health Geogr. 2005;4:4–13. Infect Microbiol. 2019;9:259–65.
34 Carbajo AE, Rubio A, Viani MJ et al. The largest dengue outbreak in 38 Nunes MRT, Faria NR, Vasconcelos JM et al. Emergence and poten-
Argentina and spatial analyses of dengue cases in relation to a control tial for spread of Chikungunya virus in Brazil. BMC Med. 2015;13:
program in a district with sylvan and urban environments. Asian Pac J 91–102.
Trop Med. 2018;11:227–30. 39 Epstein PR. Climate change and public health: emerging
35 De Figueiredo ML, de C Gomes A, Amarilla AA et al. Mosquitoes infected infectious diseases. Encyclopedia of Energy. 2004;1:380–
with dengue viruses in Brazil. Virol J. 2010;7:152–60. 92.
36 Catenacci LS, Ferreira M, Martins LC et al. Surveillance of arboviruses 40 Stewart-Ibarra AM, Lowe R. Climate and non-climate drivers of
in primates and sloths in the Atlantic Forest, Bahia, Brazil. EcoHealth. dengue epidemics in southern coastal Ecuador. Am J Trop Med Hyg.
2018;15:777–91. 2013;88:971–81.
10