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Biotechnological Potential of Rhizo and Endophytic Bacteria Associated With Mangrove PDF
Biotechnological Potential of Rhizo and Endophytic Bacteria Associated With Mangrove PDF
In the present study, bioprospecting aspects of endophytic bacteria, isolated from leaves of 5 mangroves and 2 salt-marsh
plant species, were explored. In total, 104 bacterial isolates were isolated from the leaf samples of mangrove plants of
Pichavaram, Tamil Nadu. Thirty six fast growing isolates were selected and screened for biological activities. Of 36 isolates,
28 (77%) showed antimicrobial activity, and 94.4% of isolates exhibited pectinase, 58.3% protease and 52.7% inulinase and
invertase activities. Plant growth promoting activity, such as, ammonia and acetoin production, was shown by 22 (61.1%)
and 25 (69.4%) endophyte isolates, respectively; whereas 26 isolates (72.2%) showed nitrogen fixing activity. Six isolates
(16.6%) showed phosphate solubilization activity and 7 isolates (19.4%) produced indole acetic acid (IAA). Further,
malachite green and phenol degrading activities were observed in 12 (33.3%) and 20 (55.5%) endophytic bacterial isolates,
respectively. More than 20 endophytic bacteria were sensitive to antibiotics like streptomycin and trimethoprim, while
31 isolates (86.1%) were resistant to vancomycin and bacitracin. Thirty four (94.4%) and 31 (86.6%) endophytic isolates
exhibited growth onto a medium containing upto 7.5 and 10% NaCl concentrations, respectively. The present study has
proved that the mangroves are the sources of endophytic bacteria with bioprospecting potential, which deserves further
studies.
biological activity of endophytic bacteria from dyhydrogen phosphate 0.1%; magnesium sulphate
mangrove and salt-marsh plants. 0.05%; pH 7.0)14. About 10% of inoculum was
transferred into production medium and incubated in
Materials and Methods centrifugation at 10,000 rpm for 10 min.
Sample Collection
Antimicrobial activity of culture supernatant
For the isolation of endophytic bacteria, healthy
(100 µL/well) was tested by agar well diffusion
leaf samples of five species of mangroves
method using Staphylococcus aureus, Bacillus sp.,
[Rhizophora apiculata Blume, Avicennia marina
Escherichia coli, Vibrio parahaemolyticus,
(Forssk.) Vierth., Excoecaria agallocha L., Ceriops
V. anguillarum and Fusarium sp. as test organisms.
decandra (Griff.) Ding Hou & Aegiceras
All the cultures were obtained from Christian Medical
corniculatum (L.) Blanco] and two species of salt-
College, Vellore. Cultures of V. parahaemolyticus and
marsh plants [Suaeda maritime Forssk. ex J. F. Gmel.
V. anguillarum were obtained from Central Brackish
& Sesuvium portulacastrum (L.) L.] were collected
Water Aquaculture (CIBA), Chennai. Medium used
from mangrove forest, Pitchavaram (latitude 11°27’N;
for V. parahaemolyticus and V. anguillarium was
longitude.79°47’E), Tamil Nadu. All the samples
supplemented with 2% NaCl. All the plates were
were collected in sterile plastic bags and transported
observed for zone of inhibition after incubation at
aseptically to the laboratory. For the pretreatment of
37°C for 24 h. In case of fungi, plates were incubated
leaf samples and isolation of endophytic bacteria, the
at 28ºC for 3 d.
method described by Sun et al13 was adopted. Fresh
leaf samples were washed in running tap water, Screening of Endophytic Bacteria for Enzymatic Activity
followed by 2 min wash in 70% ethanol. Then the leaf All the endophytic bacterial isolates were screened
samples were washed in 2% sodium hypochlorite for for various enzymes, such as, amylase, lipase,
1 min. Finally, leafs were washed in distilled water protease, inulinase, invertase, chitinase, pectinase,
for 2 min and dried. cellulase and urease by plate method14-17. All the
isolates are spot inoculated on respective enzyme
Isolation and Characterization of Endophytic Bacteria
screening media and incubated at 28°C for 5-7 d.
After pretreatment, mangrove leaves were crushed
with sterile distilled water using mortar and pestle. Screening of Endophytic Bacteria for Production of Plant
About 1 mL of crushed sample was serially diluted Growth Promoting Substances
and 0.1 mL of aliquot from 10-2 to 10-5 dilutions were Nitrogen fixing activity of endophytic bacteria was
taken and spread onto nutrient agar medium using studied by inoculating them into Jenson’s medium
sterile glass L-rod. Plating was done in duplicates and and incubating at 28°C for 5 d. Presence of growth on
all the plates were incubated at 28°C for 5 d. After Jenson’s medium indicates nitrogen fixation.
incubation, morphologically different bacterial Phosphate solubilizing activity of endophytic bacteria
colonies were selected and streaked on nutrient agar was studied by the method described by Pandey
plates and incubated at 28°C for 48 h. From the total et al18 using Pikovskaya’s agar medium. After
isolates, based on the differences in cultural incubation, presence of clear halo around the growth
morphology, such as, colour, texture, consistency and indicates phosphate solubilization. For the screening
size, limited numbers of representative isolates were of ammonia production, all the endophytic bacterial
selected from all the samples for further isolates were inoculated into 5 mL of sterile peptone
investigations. All the selected isolates were broth separately and incubated at 28°C for 48 h. After
subcultured in nutrient agar slants and preserved in a incubation, about 0.5 mL of Nessler’s reagent was
refrigerator at 4°C. Phenotypic characteristics, such added into all the tubes. The production of ammonia
as, Gram’s reaction, endospore staining, capsule was indicated by the appearance of pink colour. The
staining, motility, catalase and oxidase activity of all Voges-Proskauer test was used as a qualitative
the isolates were performed by adopting standard method for the detection of acetoin. Endophytic
procedures. cultures were inoculated into 2 mL of MR-VP broth
individually and incubated at 28ºC for 5 d. After
Screening of Endophytic Bacteria for Antimicrobial Activity incubation, to 1 mL of bacterial culture, 3 mL of
Antimicrobial substance from endophytic bacteria freshly prepared 5% α-naphthol in absolute ethanol
was produced by submerged fermentation using No. 3 and 1 mL of 40% KOH were added and the mixture
medium (polypeptone 1%; glucose 1%; potassium was stirred vigorously. The formation of a red colour
GAYATHRI et al: MANGROVE ENDOPHYTIC BACTERIA 399
was indicative of the presence of acetoin19. For the of which 36 isolates were selected for further
screening of indole acetic acid (IAA), about 0.1 mL of investigations based on their fast growth.
18 h old culture was inoculated into each 5 mL of
nutrient broth supplemented with 3 mg/mL of L- Characterization of Endophytic Bacteria
tryptophan and incubated at 28°C for 5 d. After Of 36 isolates selected, 9 were pigmented and 27
centrifugation at 10,000 rpm for 10 min, a drop of were non-pigmented isolates. Regarding cell shape
orthophosphoric acid and 2 mL of Solawaski’s and Gram staining, 2 were Gram-negative cocci, 11
reagent was added into the supernatant and kept for Gram-negative rods, 3 Gram-positive cocci and 20
20 min. The development of pink colour indicated the Gram-positive rods. In total, 13 isolates showed
production of IAA20. positive result for endospore staining, possibly
belonging to the genus Bacillus.
Screening of Endophytic Bacteria for Biodegradation Activity
Endophytic bacteria were spot inoculated onto Antimicrobial Activity
screening medium supplemented with malachite green Regarding antimicrobial activity, 28 isolates (77%)
(0.01%) and incubated at 28°C for 5 d. Clear zone showed inhibitions against any one of the test strains.
around the bacterial spot indicated dye degradation21. Out of them, 20 (55.5%) isolates exhibited broad
For phenol degradation, the endophytic bacterial spectrum activity. Only 5 isolates were active against
isolates were spot inoculated on mineral agar medium Gram-positive bacteria and fungi, and 7 isolates were
supplemented with phenol (0.05%) as sole carbon active against Gram-negative bacteria. Number of
source. All the plates were incubated at 28ºC for 5 d. endophytic bacteria showing antimicrobial activity is
Presence of growth on the mineral agar medium given in Fig. 1.
indicated phenol degradation22. Table 1—Number of bacterial endophytes recovered from
coastal plants
Screening of Endophytic Bacteria for Salt (NaCl) Tolerance
Endophytic bacteria were inoculated onto Name of plant Pigmented Non- Total colonies
nutrient agar medium supplemented with different pigmented recovered
concentrations of NaCl (0-10%). All the plates were Mangroves
incubated at 28°C for 5 d and bacterial growth was Rhizophora apiculata 4 22 26
observed at every 24 h. Avicennia marina 5 12 17
Excoecaria agallocha 2 11 13
Screening of Endophytic Bacteria for Antibiotic Susceptibility Ceriops decandra 0 10 10
Antibiotic susceptibility pattern of endophytic Aegiceras corniculatum. 2 4 6
bacterial isolates against different antibiotic classes Salt-marshes
was determined by adopting Kirby-Bauer disc Suaeda maritima 2 14 16
Sesuvium portulacastrum 10 6 16
diffusion method23. Broth culture of endophytic
bacteria was prepared using nutrient agar and adjusted Total 23 81 104
to 0.5 McFarland standard. All the cultures were
inoculated into nutrient agar plates using sterile cotton
swab. Standard antibiotic discs, viz., streptomycin
(amino glycoside; 10 µg), trimethoprim (synthetic;
5 µg), vancomycin (glycopeptide; 30 µg) and
bacitracin (peptide; 10 U) were placed on nutrient
agar plates and incubated at 37°C for 24 h. After
incubation, antibiotic susceptibility pattern was
determined by measuring the zone of inhibition.
Results
Isolation of Eendophytic Bacteria
Nutrient agar plates inoculated with mangrove and
salt-marsh plant leaf samples showed morphologically
different bacterial colonies. In total, 104 bacterial Fig. 1—Number of endophytic bacteria showing antimicrobial
colonies were recovered from the samples (Table 1), activity
400 INDIAN J BIOTECHNOL, OCTOBER 2010
Next to antibiotics, enzymes are the most important monitoring the pollution of coastal ecosystems by
products. In the present study, while screening the recalcitrant molecules.
endophytic bacterial isolates for 9 different Emergence of antibiotic resistance among the
extracellular enzymes, 15 isolates showed protease, pathogenic microorganisms limits treatment options.
inulinase, invertase, pectinase and cellulase activity; Antibiotic resistant genes, in addition to clinical
13 isolates exhibited amylase and 12 isolates the pathogens, are also present in environmental isolates
urease activity. Kumaresan and Suryanarayanan28 which are horizontally transferred to other
have reported the assemblage of endophytes in young, microorganisms. In the present study, antibiotic
mature and senescent leaves of R. apiculata and its susceptibility pattern of endophytic bacteria were
possible role in mangrove litter degradation. Maria studied using four different antibiotics. Most of the
et al16 have also reported enzymatic activity of isolates (23-32) were sensitive to streptomycin,
mangrove-derived endophytic fungi. The results of trimethoprim and vancomycin, but 31 isolates, out of
the present study showed the production of several 36 studied, were resistant to bacitracin.
enzymes by endophyte bacteria which might play role Occurrence of halophilic bacteria is well known in
in mangrove litter degradation. coastal marine biotopes including mangrove and salt-
Endophytic bacteria residing within plant tissues marsh ecosystems. But there is no report on halophilic
have been reported to be promoting the plant growth endophytes in the coastal plants other than the report
directly or indirectly through production of of Kamalraj et al32 who reported the effect of NaCl on
phytohormones, biocontrol of host plant diseases endophytic fungal assemblage in the leaves of a
and/or improvement of plant nutritional status18. They mangrove C. roxburghiana. In that study, none of the
possess the capacity to solubilize phosphates as endophytic fungi showed growth above 300 mM NaCl
shown with the endophytic bacteria of soybean in concentration. However, in the present study, salt
phosphate assimilation4. This is also evident in the tolerance of endophytic bacteria was reported upto
present study as endophytic bacterial isolates showed 10% NaCl concentration, but the growth rate of
four plant growth promoting activities, particularly endophytes decreased with the increase in the salt
ammonia and acetoin production by 22 and 25 concentration.
isolates, respectively. Volatile substances, such as, The coastal plants like mangroves and salt-marshes
2,3-butanediol and acetoin, produced by bacteria are have the great potential but are under-exploited source
responsible for plant growth promotion, which is a for endophytic bacteria that produce substances of
newly discovered mechanism29. potential antimicrobial, enzymatic, plant growth
promoting and biodegrading activities. Therefore,
Endophytes are recently reported in the degradation further studies are needed for possible commercial
of environmental toxins. The bacteria degrading utility of these potential biochemicals.
recalcitrant compounds were found to be more
abundant among endophytic populations in the Acknowledgement
rhizosphere of plants in contaminated soils30. The The authors sincerely thank Professor K R
improvement of phytoremediation of water soluble, Venkatesan, Principal, Sri Sankara Arts & Science
volatile organic pollutants by selected endophytic College, Kanchipuram for his encouragement and
bacteria was experimentally proved by Barac et al31. providing the research facilities. The authors also
In the present study, 12 and 20 isolates, out of 36 thank the Director, CAS in Marine Biology,
endophytic bacterial isolates, showed the degradation Annamalai University and Vice-Chancellor and
of two important environmental pollutants malachite Registrar of Periyar University, Salem for their
green and phenol, respectively. Usually dye degrading valuable help. One of the authors (RB) thanks DST,
microorganisms were from dye contaminated soils. Government of India (SR/SO/HS-42/2005), New
Interestingly, in the present study, endophytic bacteria Delhi for financial assistance.
from coastal plants showed malachite green
degradation. Further the dye degrading endophytes References
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