# Assembly Statistics Report

# Assembly name: Paracocci_br_Pb18_V2

# Organism name: Paracoccidioides brasiliensis Pb18 (ascomycetes)
# Infraspecific name: strain=Pb18
# Taxid: 502780
# BioSample: SAMN02953720
# BioProject: PRJNA28733
# Submitter: Broad Institute
# Date: 2014-10-24
# Assembly type: haploid
# Release type: major
# Assembly level: Scaffold
# Genome representation: full
# WGS project: ABKI02
# Assembly method: Pilon v. 1.4
# Genome coverage: 9.8x
# Sequencing technology: Illumina
# RefSeq category: Representative Genome
# GenBank assembly accession: GCA_000150735.2
# RefSeq assembly accession: GCF_000150735.1
# RefSeq assembly and GenBank assemblies identical: yes
#
## Assembly-Units:
## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name
## GCA_000150745.2 GCF_000150745.1 Primary Assembly
#
# Statistic Types
# Statistic Description
# contig-N50 Contig length at which 50% of total bases in assembly are in
contigs of that length or greater
# contig-count Number of contigs
# molecule-count Number of chromosomes and plasmids in full assembly
# region-count Number of genomic regions defined in full assembly
# scaffold-L50 Number of scaffolds that are longer than, or equal to, the N50
length
# scaffold-N50 Scaffold length at which 50% of total bases in assembly are in
scaffolds of that length or greater
# scaffold-N75 Scaffold length at which 75% of total bases in assembly are in
contigs of that length or greater
# scaffold-N90 scaffold length at which 90% of total bases in assembly are in
contigs of that length or greater
# scaffold-count Number of scaffolds
# spanned-gaps Number of spanned gaps. Spanned gaps are gaps within a scaffold
# top-level-count Number of chromosomes or plasmids, unplaced/unlocalized
scaffolds, alt-loci scaffolds, and patch scaffolds
# total-gap-length Total length of gaps
# total-length Total sequence length including bases and gaps
# ungapped-length Total length excluding gaps
# unspanned-gaps Number of unspanned gaps. Unspanned gaps are gaps between
scaffolds
#
# Sequence-type Description
# all statistic covers all the sequences in the unit-assembly and molecule(s)
specified.
# molecule statistic covers the specified molecule. molecule-name and molecule-
type/loc will be given.
# unlocalized statistic covers the sequences assigned to a molecule but with no
position. molecule-name and molecule-type/loc will be given.
# unplaced statistic covers the sequences not assigned to any molecule in the
assembly.
#
# unit-name molecule-name molecule-type/loc sequence-type statistic value
all all all all total-length 29952540
all all all all spanned-gaps 499
all all all all unspanned-gaps 0
all all all all region-count 0
all all all all scaffold-count 57
all all all all scaffold-N50 2149514
all all all all scaffold-L50 5
all all all all scaffold-N75 1183763
all all all all scaffold-N90 338417
all all all all contig-count 556
all all all all contig-N50 123837
all all all all total-gap-length 483815
all all all all molecule-count 0
all all all all top-level-count 57
Primary Assembly all all all total-length 29952540
Primary Assembly all all all ungapped-length 29468725
Primary Assembly all all all scaffold-count 57
Primary Assembly all all all scaffold-N50 2149514
Primary Assembly all all all spanned-gaps 499
Primary Assembly all all all unspanned-gaps 0
Primary Assembly all all assembled-molecule total-length 0
Primary Assembly all all assembled-molecule ungapped-length 0
Primary Assembly all all assembled-molecule scaffold-count 0
Primary Assembly all all assembled-molecule scaffold-N50 0
Primary Assembly all all assembled-molecule spanned-gaps 0
Primary Assembly all all assembled-molecule unspanned-gaps 0
Primary Assembly all all unlocalized-scaffold total-length 0
Primary Assembly all all unlocalized-scaffold ungapped-length 0
Primary Assembly all all unlocalized-scaffold scaffold-count 0
Primary Assembly all all unlocalized-scaffold scaffold-N50 0
Primary Assembly all all unlocalized-scaffold spanned-gaps 0
Primary Assembly all all unlocalized-scaffold unspanned-gaps 0
Primary Assembly na na unplaced-scaffold total-length 29952540
Primary Assembly na na unplaced-scaffold ungapped-length 29468725
Primary Assembly na na unplaced-scaffold scaffold-count 57
Primary Assembly na na unplaced-scaffold scaffold-N50 2149514
Primary Assembly na na unplaced-scaffold spanned-gaps 499
Primary Assembly na na unplaced-scaffold unspanned-gaps 0