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Index

Note: Page numbers followed by f indicate figures and t indicate tables.

A pathogenesis, 88–89, 88t


Acrylamide (ACR), 332–333 symptoms, 87
Acute coronary syndrome (ACS), 168 Angiotensin I converting enzyme 2
Acute respiratory distress syndrome (ACE2), 255–256
(ARDS), 262–264 Arsenic, 332
Adipocytokines/adipokines, 207–208 Arterial hypertension, 170–171
Adipose tissue macrophages (ATMs), Atherosclerosis, 166–167, 196–197
207–208 Atrial fibrillation (AF), 168–169
α-synuclein (α-syn) Autism spectrum disorder (ASD), 104
Braak’s hypothesis, 126–127 Ayurveda
dysbiosis, 18–19 ayurveda-herbal formulations (AHF),
exocytosis, 125–126 288
impaired ubiquitin-proteasome system biodiversity centers, 288
(UPS), 127, 128f dysbiosis, 309
Lewy body, 126, 128 gut microbiome (GM)
Alzheimer’s disease (AD) Alzheimer’s disease (AD), 299–300
amyloid, 106 amino acid metabolites, 291–292
BACE1 inhibitor, 143–144 ayurgenomics, 308
β-amyloid (Aβ) plaques, 143–144, 149–150 brain function, 289
cerebral blood flow (CBF), 143–144, chronic neuroinflammation, 290–291
150–152, 151f curcumin, 301
fecal microbiota transplantation (FMT), 21 fecal microbiota transplantation
gut microbiota (FMT), 294
bacteroidetes, 144–146 flavonoids, 300
dysbiosis, 144–146 human populations, 307–308
firmicutes, 144–146 Huntington’s disease (HD), 298
homeostasis, 144–146 microbial species, 289
pathogenesis, 146–150, 148f microglia, 290–291
SCFAs, 146 neurodegenerative disorders (NDD),
lipopolysaccharides (LPS), 106 290, 301–307, 303s, 305–306t
neurofibrillary tangles (NFTs), 143–144 Parkinson’s disease (PD), 297–298
sleep deprivation, 151f, 152–153 personalized nutrition (PN), 294
trimethylamine oxide (TMAO), 16–17 phytochemicals, 294–296, 295t
Amyotrophic lateral sclerosis (ALS) prebiotics, 293
gut microbiota, 90–92, 93f probiotics, 293–294
kynurenine pathway (KP) short-chain fatty acids (SCFAs), 291
aryl hydrocarbon receptor (AhR), spice herbs and neuroprotection, 301
89–90 trimethylamine (TMA), 291
3-hydroxykynurenine (3-HK), 89–90 vitamins, 292
pathogenesis, 90, 91f origin, 287
quinolinic acid (QUIN), 89–90 terminology, 287
tryptophan (Trp) metabolites, 89–90 tridoshas, 287–288
lipopolysaccharides (LPS), 109–110 Ayurveda-herbal formulations (AHF), 288

357
358 Index

B heart failure, 169–170


Betaine, 55–57, 56f intestinal microbiome, 163–166
Bile acids (BAs), 12–13 obesity, 212–215, 213–214f
Bioactive lipids (BALs) treatment, 173–175
beneficial actions, 244f, 245 trimethylamine oxide (TMAO),
dietary needs, 235–236 163–166, 166f
essential fatty acids (EFAs) Celiac disease (CD), 277
alpha-linolenic acid (ALA), 236–237, Cerebral blood flow (CBF), 143–144,
241–242 150–152, 151f
arachidonic acid (AA), 238–240, Cerebral vasodilation, 268–269, 270f
239–240f Chemokines, 262–264
COX-2 expression, 242–243 Choline, 55–57, 56f
deficiency of, 238–240 Chronic migraine (CM), 267
docosahexaenoic acid (DHA), Colonization resistance (CR), 9–10
236–237 Congestive heart failure (CHF),
eicosapentaenoic acid (EPA), 198–200
236–237 Coronavirus disease 2019 (COVID-19)
gut microbiota, 243 acute respiratory distress syndrome
linoleic acid (LA), 236–237, 241–242 (ARDS), 262–264
lipoxin A4 (LXA4), 236–237, 243 angiotensin I converting enzyme 2
human breast milk, 245 (ACE2), 255–256
neurotransmitters, 240–241 cardiovascular changes, 261
small-chain fatty acids (SCFAs), 235, characteristics, 255
240–241, 243–245 cytokine storm, 262–264
gut microbiota and digestive tract, 258,
C 259–260f
Cardiometabolic diseases (CMDs) kidney damage, 261–262
characteristics, 187 multiple organ failure, 262–264
epigenetic factors, 188 respiratory tract and lungs, 257–258
gut microbiome (GM) symptoms of, 256, 256t
dysbiosis, 186–187, 190–200 Cortical spreading depression (CSD), 270f,
functions, 185 271
gluten-free diet (GFD), 190 COVID-19. See Coronavirus disease 2019
gut–brain axis (GBA), 185, 186f (COVID-19)
Mediterranean diet, 189–190 Cytokine, 262–264
phyla, 185
role of, 185, 186f D
vegetarian diets, 189 Dairy products consumption, 75
Western diet, 188–189 Diabetes mellitus
Cardiovascular diseases (CVDs) cardiometabolic diseases (CMDs),
acute coronary syndrome (ACS), 168 193–195
arterial hypertension, 170–171 gut microbiota
atherosclerosis, 166–167 dysbiosis, 160
atrial fibrillation (AF), 168–169 enterotype hypothesis, 159–160
environmental and internal factors, insulin resistance (IR), 160
163–166 metagenomic sequencing, 171–172
flavin monooxygenase (FMO), role of, 160
163–166 treatment, 172–173
Index 359

type 1 (T1D), 162–163, 164–165t congestive heart failure (CHF),


type 2 (T2D), 160–162 198–200
Dietary Approach to Stop Hypertension diabetes, 193–195
(DASH) diet, 111–112 gut microbiome (GM), 190–191
Dietary fiber, human diet hypertension, 197–198
beneficial effects, 53–54, 55f non-alcoholic fatty liver disease
carbohydrate polymers, 51 (NAFLD), 195–196
energy intake mechanism, 52–53 obesity, 192–193, 194f
functions, 61–63 diabetes mellitus, 160
GLP-1, 53–54 diet patterns, 29–32
gut microbiota, 54–55 gut microbiota, 18–19, 18f
insoluble fiber, 51–52 ischemic stroke, 221
mean intake, 51 migraine headache and
microbiota-derived bioactive molecules, celiac disease (CD), 277
55–57, 56f gastroparesis, 277–278
phytate, 51–52 Helicobacter pylori, 276
prebiotics, 52–53 infantile colic, 278–279
satiation, 53–54 inflammatory bowel disease (IBD),
short- chain fatty acids (SCFA), 57–58 276
soluble fiber, 51–52 irritable bowel syndrome (IBS),
sources of, 51–52, 52f 276–277
trimethylamine (TMA), 58–61, 59f obesity, 209–210
trimethylamine oxide (TMAO), 58–61, Parkinson’s disease (PD), 128–131
59f visceral and neurological disorders, 353
tryptophan, 61, 62f
Diet patterns E
actinobacteria, 29–31 Episodic migraine (EM), 267
bacteroidetes, 29–31 Essential fatty acids (EFAs)
bidirectional communication, 31–32 alpha-linolenic acid (ALA), 236–237,
dysbiosis, 29–32 241–242
firmicutes, 29–31 arachidonic acid (AA), 238–240,
ketogenic diet, 43–44 239–240f
Mediterranean diet, 38–40, 39f COX-2 expression, 242–243
microbiota-accessible carbohydrates deficiency of, 238–240
(MACs), 32 docosahexaenoic acid (DHA),
proteobacteria, 29–31 236–237
short chain fatty acids (SCFAs), 32–34, eicosapentaenoic acid (EPA), 236–237
33f gut microbiota, 243
symbiotic relationship, 29–31 linoleic acid (LA), 236–237, 241–242
toll-like receptors (TLRs), 29–31 lipoxin A4 (LXA4), 236–237, 243
trimethylamine oxide (TMAO), 34
vegetarian diet, 40–43, 42f F
Western diet, 34–38, 35f Fecal microbiota transplantation (FMT),
Dysbiosis 114
Alzheimer’s disease (AD), 144–146 Alzheimer’s disease (AD), 21
α-synuclein (α-syn), 18–19 Parkinson’s disease (PD), 21
cardiometabolic diseases (CMDs) visceral and neurological disorders,
atherosclerosis, 196–197 349–350, 354
360 Index

Fermented foods firmicutes, 144–146


adverse effects, 80 homeostasis, 144–146
beneficial effects, 70–71, 70f pathogenesis, 146–150, 148f
bioactive peptides, 71 SCFAs, 146
dairy products, 75 amyotrophic lateral sclerosis (ALS),
definition, 69–70 90–92, 93f
disease-protecting effects, 71, 71f ayurveda
edible bacteria, 69–70 Alzheimer’s disease (AD), 299–300
food safety issues, 70 amino acid metabolites, 291–292
functional foods/nutraceuticals, 69–70 ayurgenomics, 308
kefir, 74 brain function, 289
kimchi, 79–80, 79f chronic neuroinflammation, 290–291
kombucha, 75–76 curcumin, 301
miso, 77 fecal microbiota transplantation
nattō, 77–79, 78f (FMT), 294
neuroactive metabolites, 71–73, 72f flavonoids, 300
sauerkraut, 76 human populations, 307–308
tempeh, 76–77 Huntington’s disease (HD), 298
Flavin monooxygenase (FMO), 163–166 microbial species, 289
Free fatty acids (FFAs), 209–210 microglia, 290–291
neurodegenerative disorders (NDD),
G 290, 301–307, 303s, 305–306t
Gastrointestinal (GI) disorders, 274–279, 275t Parkinson’s disease (PD), 297–298
Gastroparesis, 277–278 personalized nutrition (PN), 294
Gluten-free diet (GFD), 190 phytochemicals, 294–296, 295t
Gut–brain axis (GBA), 269f prebiotics, 293
definition, 279 probiotics, 293–294
dysregulation, 279–280, 280f short-chain fatty acids (SCFAs), 291
gut microbiota, 16–17 spice herbs and neuroprotection, 301
neurodegenerative disorders (NDD) trimethylamine (TMA), 291
autism spectrum disorder (ASD), 104 vitamins, 292
bi-directional signaling network, 103–104 bile acids (BAs), 12–13
brain development, 104 breast-fed/formula-fed infants, 5
composition and function, 105 cardiometabolic diseases (CMDs)
germ-free (GF) animals, 104 dysbiosis, 186–187, 190–200
irritable bowel syndrome (IBS), 104 functions, 185
neurotransmitters, 280–281 gluten-free diet (GFD), 190
nitroglycerine (NTG)-induced migraine- gut–brain axis (GBA), 185, 186f
like pain, 281 Mediterranean diet, 189–190
Parkinson’s disease (PD) phyla, 185
chronic constipation, 136 role of, 185, 186f
prebiotics, 135 vegetarian diets, 189
probiotics, 134–135 Western diet, 188–189
symbiotics, 135–136 classification, 2–3, 3f
Gut microbiome (GM) colonization resistance (CR), 9–10
Alzheimer’s disease (AD) diabetes mellitus
bacteroidetes, 144–146 dysbiosis, 160
dysbiosis, 144–146 enterotype hypothesis, 159–160
Index 361

insulin resistance (IR), 160 Huntington’s disease (HD)


metagenomic sequencing, 171–172 gut microbiota, 96
role of, 160 molecular mechanisms
diet, 5–6 kynurenic acid (KYNA), 94–95
dysbiosis, 18–19, 18f L-tryptophan metabolites, 94–95
energy gain and expenditure, 13–14 mutant huntingtin (mHTT), 92–94
fecal microbiota transplantation (FMT), 21 pathogenesis, 92–95, 95f
fetal development and mode of delivery, symptoms, 92–94
4–5 neurodegenerative disorder (NDD),
functions, 6, 7–9t 108–109
gut–brain axis (GBA), 16–17 Hypertension, 197–198
host protection and immune- system Hypothalamic-pituitary-adrenal (HPA)
development, 14–15 axis, 15–16
Huntington’s disease, 96
hypothalamic-pituitary-adrenal (HPA) I
axis, 15–16 Indole pathway, 61, 62f
intestinal colonization, 1 Indolepropionic acid (IPA), 13–14
intestinal epithelial cells (IECs), 10–11 Infantile colic, 278–279
intrinsic and extrinsic factors, 4, 4f Inflammatory bowel disease (IBD), 276
ischemic stroke Insulin resistance (IR)
aging, 229–230, 229f gut microbiota, 160
bacterial metabolites, 227 obesity, 209–210, 211f
blood-brain barrier (BBB) disruption, Intestinal epithelial cells (IECs), 10–11
229 Irritable bowel syndrome (IBS), 104, 276–277
pathophysiology, 226–227 Ischemic core, 221–222
structural components, 225–226 Ischemic penumbra, 221–222
trimethylamine oxide (TMAO), Ischemic stroke
227–229, 228f DAPK1 inhibitors, 222–225, 224f
neurodegenerative disorders (NDD) dysbiosis, definition, 221
firmicutes and bacteroidetes, 102 endocrine organ, 221
functions, 103 gut microbiota
Parkinson’s disease (PD) aging, 229–230, 229f
dysbiosis, 128–131 bacterial metabolites, 227
gut–brain axis (GBA), 131, 133f, blood-brain barrier (BBB) disruption,
134–136 229
prebiotics, 19–20 pathophysiology, 226–227
probiotics, 20–21 structural components, 225–226
visceral and neurological disorders trimethylamine oxide (TMAO),
bioactive substances, 348–349, 349t 227–229, 228f
composition of, 345–347, 347f hemorrhagic stroke, 221–222
pathogenesis of, 350–353, 352f ischemic core, 221–222
role of, 345–347, 346f ischemic penumbra, 221–222
microglia, 222–225
H neuroinflammation, 222–225
Heart failure, 169–170 nitric oxide (NO), 230–231
Hemorrhagic stroke, 221–222 pathogenesis, 222–225, 223f
Human gastrointestinal (GI) tract. See Gut stroke-mediated injury, 222–225
microbiota symbiotic balance, 221
362 Index

K hypertension, 197–198
Kefir consumption, 74 non-alcoholic fatty liver disease
Ketogenic diet, 43–44 (NAFLD), 195–196
Kimchi consumption, 79–80, 79f obesity, 192–193, 194f
Kombucha consumption, 75–76 Migraine headache
Kynurenine pathway (KP) celiac disease (CD), 277
aryl hydrocarbon receptor (AhR), 89–90 challenges, 282–283
3-hydroxykynurenine (3-HK), 89–90 chronic migraine (CM), 267
pathogenesis, 90, 91f cortical spreading depression (CSD),
quinolinic acid (QUIN), 89–90 270f, 271
tryptophan (Trp) metabolites, 61, 62f, dysbiosis and, 274–279
89–90 episodic migraine (EM), 267
gastrointestinal (GI) disorders, 274–279,
L 275t
Lead (Pb), 331 gastroparesis, 277–278
Lipopolysaccharides (LPS) gut–brain axis (GBA), 269f
Alzheimer’s disease (AD), 106 definition, 279
amyotrophic lateral sclerosis (ALS), dysregulation, 279–280, 280f
109–110 neurotransmitters, 280–281
Lou Gehrig’s disease. See Amyotrophic nitroglycerine (NTG)-induced
lateral sclerosis (ALS) migraine-like pain, 281
Helicobacter pylori infection, 276
M infantile colic, 278–279
Manganese (Mn), 330–331 inflammatory bowel disease (IBD), 276
Mediterranean-DASH Intervention of irritable bowel syndrome (IBS),
Neurodegenerative Delay (MIND) 276–277
diet, 112 neurological theory, 268, 269f
Mediterranean diet physiopathology, 268
cardiometabolic diseases (CMDs), probiotics, 282–283
189–190 risk factors, 267–268
diet pattern, 38–40, 39f symptoms, 267
visceral and neurological disorders, trigeminovascular system
347–348 antimigraine drugs, 272
Mediterranean Diet (MeDi), 111 aura phase, 272
Metabolic disorders, 159 headache phase, 272
Metabolic syndrome (MetS), 211f, 212 neurovascular theory, 273
Metagenomic sequencing, 171–172 premonitory phase, 272
Methylmercury, 331–332 prostaglandin E 2 (PGE2) i, 273
1-methyl-4-phenyl-1,2,3,6- vascular theory
tetrahydropyridine (MPTP), 328 cerebral vasodilation, 268–269, 270f
Microbiota, gut. See Gut microbiome pituitary adenylate cyclase-activating
(GM) peptide-38 (PACAP38), 269–270
Microbial dysbiosis serotonin (5-HT), 268–269
atherosclerosis, 196–197 Triptans’ mechanism, 269–270
congestive heart failure (CHF), Miso consumption, 77
198–200 Mitochondrial dysfunction, 143–144,
diabetes, 193–195 150–152
gut microbiome (GM), 190–191 Multiple sclerosis (MS), 110–111
Index 363

N manganese (Mn), 330–331


Nattō consumption, 77–79, 78f methylmercury, 331–332
Neurodegenerative disorders (NDD) microbial influence, neuroimmune
Alzheimer’s disease (AD), 106–107 function, 327
amyotrophic lateral sclerosis (ALS), microbial regulation, neuroactive
109–110 metabolites, 326–327
antibiotics, 113 microbial transformation, 324–326
ayurveda microbiome alterations, 320–323,
nanoformulations, herbal extracts, 307 321–322t
polyherbalism–polyherbal neurotoxic outcomes, 319–320, 325f
formulations (PHFs), 304–305, organic compounds
305–306t acrylamide (ACR), 332–333
prevalence of, 302 polychlorinated biphenyls (PCBs), 333
triphala, 302–303, 303s, 306–307 pesticides
definition, 105 1-methyl-4-phenyl-1,2,3,6-
Dietary Approach to Stop Hypertension tetrahydropyridine (MPTP), 328
(DASH) diet, 111–112 organophosphate (OP), 329–330
fecal microbiota transplantation (FMT), paraquat (PQ), 329
114 rotenone, 328–329
gut–brain axis (GBA) prebiotics, 334–335
autism spectrum disorder (ASD), 104 probiotics, 335–336
bi-directional signaling network, Nitrosative stress, 230–231
103–104 Non-alcoholic fatty liver disease (NAFLD)
brain development, 104 cardiometabolic diseases (CMDs),
composition and function, 105 195–196
germ-free (GF) animals, 104
irritable bowel syndrome (IBS), 104 O
gut microbiome (GM) Obesity
firmicutes and bacteroidetes, 102 adipocytokines/adipokines, 207–208
functions, 103 adipose tissue, 207–208
Huntington’s disease (HD), 108–109 adipose tissue macrophages (ATMs),
Mediterranean Diet (MeDi), 111 207–208
microbiota-gut-brain axis, 104–105 gut–brain axis homeostasis, 215–216
multiple sclerosis (MS), 110–111 blood-brain barrier (BBB), 215–216
Parkinson’s disease (PD), 107–108 cardiometabolic diseases (CMDs),
placental microbiome, 101–102 192–193, 194f
prebiotics, 112–113 cardiovascular disease (CVD), 212–215,
probiotics, 112–113 213–214f
in utero colonization hypothesis, diet and microbiota, 210
101–102 metabolic syndrome (MetS), 211f, 212
Western diet, 112 microbiota composition, 210–212, 211f
Neurological disorders molecular mechanism, 209–210
dietary factor, 333–334 plant-based and animal-based diet
environmental pollutants, 319 consumption, 207–208, 208f
gut–brain axis (GBA), 323 type2 diabetes, 210–212, 211f
metals and inorganic compounds Obstructive sleep apnea, 151f, 152–153
arsenic, 332 Organophosphate (OP), 329–330
lead (Pb), 331 Oxidative stress, 146–152, 230–231, 328
364 Index

P R
Paraquat (PQ), 329 Rotenone, 328–329
Parkinson’s disease (PD)
α-synuclein S
Braak’s hypothesis, 126–127 Sauerkraut consumption, 76
exocytosis, 125–126 Short chain fatty acids (SCFAs)
impaired ubiquitin-proteasome system Alzheimer’s disease (AD), 146
(UPS), 127, 128f bioactive lipids (BALs), 235, 240–241,
Lewy body, 126–128 243–245
dopaminergic neurons, 123 diet patterns, 32–34, 33f
fecal microbiota transplantation (FMT), gut microbiota, 13, 17
21 microbial regulation, 326–327
gut microbiota visceral and neurological disorders,
dysbiosis, 128–131 348–349
gut–brain axis (GBA), 131, 133f, Stroke. See Ischemic stroke
134–136
incidence of, 125–126 T
motor symptoms, 123, 124f Tempeh consumption, 76–77
neurodegenerative disorder (NDD), Toll-like receptors (TLRs), 14–15
107–108 Triggering receptors expressed on myeloid
nonmotor symptoms, 124–125, 124f cells (TREMs), 146–149
olfactory dysfunction, 127–128 Trimethylamine (TMA)
phosphorylation, 126 dietary fiber, 58–61, 59f
synuclein propagation gut microbiota, 13–14
α-synuclein, 133–134 Trimethylamine oxide (TMAO)
dopaminergic neurons, 133–134 cardiovascular diseases (CVDs), 163–166,
prion concept, 134 166f
Pesticides dietary fiber, 58–61, 59f
1-methyl-4-phenyl-1,2,3,6- diet patterns, 34
tetrahydropyridine (MPTP), 328 gut microbiota, 16–17
organophosphate (OP), 329–330 ischemic stroke, 227–229, 228f
paraquat (PQ), 329 Type 1 diabetes mellitus (T1D), 162–163,
rotenone, 328–329 164–165t
Phosphatidylcholine (PtdCho), 58–61 Type 2 diabetes mellitus (T2D), 160–162,
Pituitary adenylate cyclase-activating 210–212, 211f
peptide-38 (PACAP38), 269–270
Polychlorinated biphenyls (PCBs), 333 V
Prebiotics Vascular dysfunction, 150–152
gut microbiota, 19–20 Vascular theory
neurodegenerative disorders (NDD), cerebral vasodilation, 268–269, 270f
112–113 pituitary adenylate cyclase-activating
neurological disorders, 334–335 peptide-38 (PACAP38), 269–270
Probiotics serotonin (5-HT), 268–269
gut microbiota, 20–21 Triptans’ mechanism, 269–270
neurodegenerative disorders (NDD), Vegetarian diets
112–113 cardiometabolic diseases (CMDs), 189
neurological disorders, 335–336 diet patterns, 40–43, 42f
Index 365

Visceral and neurological disorders short-chain fatty acids (SCFAs),


dysbiosis, 353 348–349
fecal microbiota transplantation (FMT), spatial distribution, 345–347, 346f
349–350, 354 Western diet, 347–348
gut microbiota
bioactive substances, 348–349, 349t W
composition of, 345–347, 347f Western diet
pathogenesis of, 350–353, 352f Alzheimer’s disease (AD), 144–146,
role of, 345–347, 346f 150–152
histone deacetylase (HDAC), 348–349 cardiometabolic diseases (CMDs), 188–189
gut–brain axis (GBA), 354 diet patterns, 34–38, 35f, 112
Mediterranean diet, 347–348 visceral and neurological disorders, 347–348

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