Professional Documents
Culture Documents
CASE PRESENTATIONS high-dose GC, and she was discharged home 2 weeks later
on 60 mg of daily prednisone and oral levofloxacin for a
Case 1 total of 3 weeks of antibiotics. In addition, she was dis-
History of the present illness. A 25-year-old woman charged on trimethoprim/sulfamethoxazole (TMP/SMX)
was diagnosed with systemic lupus erythematosus (SLE) 2 160/800 mg 3 times weekly for Pneumocystis jiroveci
years prior to admission, after she presented with fever, pneumonia (PCP) prophylaxis. One week before her cur-
malaise, lymphadenopathy, arthritis, myalgias, malar rash, rent admission, she was started on 1,000 mg of mycophe-
and positive serologies for antinuclear antibody (ANA) nolate mofetil (MMF) daily. She then presented to our
and anti– double-stranded DNA (anti-dsDNA). Additional hospital with acute left-sided pleuritic chest pain, dys-
serology tests were negative for anti-Ro/SSA, anti-La/SSB, pnea, and arthralgias. She did not have fever or cough.
RNP, and Sm antibodies, as well as antiphospholipid an-
tibodies (aPL). She was treated with intermittent courses Medical history. She had a history of mild asthma and
of glucocorticoids (GC) for disease flares. Eight months hypothyroidism.
before admission, she had a severe flare that manifested
with high fevers, weight loss, delirium, spastic bladder, Family and social history. Her family history was un-
and non-nephrotic proteinuria. She was ultimately diag- remarkable except for a maternal aunt who also had SLE.
nosed with gray matter transverse myelitis of the conus There was no history of smoking, alcohol, or illicit drug
medullaris and lupus nephritis. She was treated aggres- use.
sively with pulse GC and intravenous (IV) cyclophos-
phamide (CYC), which led to resolution of all symptoms. Medications. Her home medications included predni-
After completion of a 6-month course of IV CYC, she was sone 40 mg daily, MMF 500 mg twice daily, hydroxychlo-
maintained on 20 mg of prednisone. One month prior to roquine (HCQ) 200 mg daily, TMP/SMX 160/800 mg 3
admission, she was admitted to another hospital with left- times weekly, esomeprazole 40 mg, and levothyroxine 50
sided pleurisy, dyspnea, and high fever. A chest computed g daily. She was not taking any supplements.
tomography (CT) scan excluded pulmonary embolism, but
showed bilateral lung lower lobe consolidations with Review of systems. She denied fevers, chills, cough,
pleural effusions (left larger than right) and a small fluid dyspnea, leg swelling, joint pain, skin rash, or oral ulcers.
collection adjacent to her spleen. Her blood cultures grew
Salmonella. Her symptoms improved with cefepime and Physical examination. She appeared to have Cushin-
goid features, but was afebrile and not hypoxic. Her blood
Supported by the Mary Kirkland Center for Lupus Re- pressure was 140/90 mm Hg and her heart rate was 90
search. beats per minute. She had decreased breath sounds over
1
Caroline M. Gulati, MD, Michael J. Satlin, MD, Cynthia her left lower lung field. She had a normal cardiac exam-
M. Magro, MD: New York Presbyterian Hospital and Weill
ination and no hepatosplenomegaly, lymphadenopathy,
Cornell Medical College, New York; 2Kyriakos A. Kirou,
MD: Hospital for Special Surgery, New York, New York. rashes, or ulcers. She had a normal neurologic examina-
Dr. Kirou has received consultant fees (less than $10,000) tion and no joint swelling or tenderness.
from Exagen Diagnostics.
Address correspondence to Kyriakos A. Kirou, MD, Mary
Kirkland Center for Lupus Research, Hospital for Special Laboratory and radiologic evaluation with hospital
Surgery, 535 East 70th Street, New York, NY 10021. E-mail: course. Her initial blood tests are shown in Table 1. She
kirouk@hss.edu. had non-nephrotic proteinuria and microscopic hematuria
Submitted for publication November 28, 2012; accepted in
revised form February 12, 2013. without a rise in her baseline creatinine level. A kidney
biopsy was not performed because her nephritis appeared
1005
1006 Gulati et al
Normal
Case 1 Case 2 values
* WBC ⫽ white blood cell; LDH ⫽ lactate dehydrogenase; ESR ⫽ erythrocyte sedimentation rate;
anti-dsDNA ⫽ anti– double-stranded DNA; RBC ⫽ red blood cell; hpf ⫽ high-power field.
mild and the results were unlikely to change her manage- Case 2
ment. CT imaging of the chest, abdomen, and pelvis again
excluded pulmonary embolism, but showed a left-sided History of the present illness. A 23-year-old woman
pleural effusion with adjacent lung consolidation and a was diagnosed with SLE 10 months before admission, after
parasplenic fluid collection. Her pleural fluid was sampled she presented with high fever, malaise, and alopecia. She
and showed an exudative process with a neutrophilic in- was found to have pancytopenia, a pericardial effusion,
flammatory response (Table 1) without organisms on Gram and International Society of Nephrology/Renal Pathology
stain or culture. A transthoracic echocardiogram was nor- Society class IV-G (A) lupus nephritis based on renal bi-
mal. Her GC dose was increased to 16 mg of IV methyl- opsy. Her serologic tests showed low complement levels,
prednisolone (IVMP) every 8 hours and she received an as well as antibodies to dsDNA, SSA, SSB, RNP, and Sm.
additional 500 mg dose of IVMP. MMF was continued at aPL tests were negative. She improved after treatment with
the same dose. IV oxacillin was initiated after 1 of 2 sets of high-dose GC and one dose of IV CYC, and was started on
blood cultures grew Staphylococcus warneri. Despite MMF maintenance therapy. Four months before admis-
these interventions, her symptoms did not improve. Bron- sion, while receiving prednisone 15 mg daily, she devel-
choscopy was performed 9 days after admission and bron- oped autoimmune hemolytic anemia. Her prednisone dos-
choalveolar lavage (BAL) yielded nonbloody, cellular, age was increased to 50 mg/day and HCQ was added to her
frothy fluid. The fluid was negative for bacterial, fungal, regimen. Eight weeks before admission, she developed a
and mycobacterial pathogens, but was positive for influ- new severe left-sided pleuritic chest pain that prompted
enza A by polymerase chain reaction (PCR). Oseltamivir admission at another hospital. She was noted to have a
was prescribed for a 5-day course. Transbronchial biopsies peripheral mass-like left lower lobe pulmonary infiltrate
(TBBX) were unable to be performed because of hypoxia on a chest CT scan. She underwent a CT-guided needle
during the procedure. Her abdominal fluid was sampled biopsy that revealed “organizing pneumonia with diffuse
on day 14 by CT guidance to exclude an abscess and alveolar damage.” She was treated with a short course of
showed serosanguinous fluid, consistent with serositis. IV antibiotics, her prednisone dosage was increased from
She had a repeat chest CT scan 16 days after admission 35 mg to 50 mg/day, and MMF was continued. One week
that showed loculations within a moderate left pleural after discharge, her chest pain worsened and she was
effusion and an unchanged left lower lobe consolidation readmitted and treated with IV vancomycin and piperacil-
despite high-dose GC, IV oxacillin, and oseltamivir (Figure lin tazobactam, followed by oral levofloxacin, for a total of
1A). The patient underwent video-assisted thoracoscopic 10 days of antibiotics. After initial improvement, her pleu-
surgery (VATS) 21 days after admission for a more defin- ritic chest pain returned and she developed a new dry
itive diagnosis. cough, prompting her first admission to our hospital. Her
Clinicopathologic Conference 1007
Figure 2. Two days before (A) and 3 days after (B) pulse glucocorticoid therapy in
case 2.
were negative and blood and urine cultures were negative. cause of immunosuppressive medications and immuno-
CMV from plasma showed 201 copies of DNA per ml. dysregulation associated with their underlying disease (1).
Given the size of the effusion, progressive hypoxia, and Both patients had been receiving prolonged courses of
lack of a diagnosis, VATS was performed 6 days after high-dose GC and also had received other immunosup-
admission for decortication and biopsies of the lung and pressive agents such as IV CYC and MMF. They were also
pleura. severely lymphopenic (Table 1), likely related to GC and
their underlying disease. Their immunocompromised
Case summaries states were highlighted by a recent history of salmonellosis
Both cases describe patients with severe SLE requiring in case 1 and CMV reactivation in case 2. Immunocompro-
heavy immunosuppression who developed severe pleu- mised patients with SLE are at a high risk of pulmonary
risy while receiving high doses of GC and had concurrent infections due to common bacteria, such as Staphylococ-
loculated pleural effusions with lung consolidation. Pleu- cus aureus and Streptococcus pneumoniae, but also may
ral fluid analyses revealed exudative and neutrophilic in- be at risk for opportunistic infections such as Mycobacte-
flammatory responses without evidence of empyema. rium tuberculosis, Nocardia, fungi (including Cryptococ-
Given their immunosuppression, there was concern for cus neoformans and Aspergillus), and P jiroveci (2–7). It is
infection in both cases. Case 1 had just recovered from a also important to note that fever may be masked in patients
systemic infection with Salmonella, had evidence of in- receiving high doses of GC, and therefore the absence of
fluenza infection in her BAL fluid, had one positive blood fever does not exclude infection.
culture for coagulase-negative staphylococci, and did not
respond to antiinfluenza and antistaphylococcal therapies. SLE pleurisy
Case 2 had a more chronic course of pleurisy but an acute
exacerbation after pulse GC therapy. In addition, case 2 Pleurisy is the most common pulmonary manifestation of
had nodular consolidations on imaging that were of con- SLE and occurs in 30 –50% of patients (7). The presenta-
cern for infection and evidence of CMV reactivation in tion varies and may consist of pleuritic chest pain alone
BAL fluid and plasma. Both cases had evidence for active without an effusion. Not infrequently, pleurisy is associ-
SLE with pleurisy, as well as active lupus nephritis with ated with pericarditis (pleuropericarditis), which can also
proteinuria and active urinary sediment. In addition, case present isolated. SLE pleurisy is thought to be caused by
2 had evidence for interstitial pneumonitis with septal immune complex deposition in vessels with subsequent
capillary injury and immune deposits that were consistent complement activation and direct binding of anti-dsDNA
with lupus pneumonitis. antibodies to the mesothelium (8 –10). Although rare, ef-
fusions can be unilateral (10,11). Pleural fluid can be lym-
phocytic or neutrophilic and typically has a pH ⬎7.35, as
DIFFERENTIAL DIAGNOSIS in both of our cases (12). Complement, ANA, and anti-
dsDNA levels can be measured in pleural fluid and are
Infections helpful in assessing the role of SLE as a cause of pleural
Both patients had severe SLE and presented with painful effusion (13,14). Pleural fluid ANA levels are nonspecific,
pleural effusions and lung consolidation while being se- since they may also be elevated in malignancy, but they
verely immunosuppressed. The foremost differential diag- are sensitive. Therefore, the absence of pleural fluid ANA
nosis in this clinical context is infection versus active makes it unlikely that SLE is the cause of a pleural effusion
lupus. Pulmonary infections are common in patients with (15,16). On the other hand, the presence of either anti-
SLE and should be a primary consideration in an SLE dsDNA antibodies or lupus erythematosus cells (neutro-
patient presenting with respiratory symptoms. Patients phils with ingested nuclear debris appearing as a homog-
with SLE may be profoundly immunocompromised be- enous round inclusion) are diagnostic of SLE, but are not
Clinicopathologic Conference 1009
BAL fluid did not suggest DAH, but they could have been
Table 2. Differential diagnosis of pleuritic chest pain
with or without pleural effusion in patients with SLE* consistent with ALP. Nevertheless, the largely unilateral
lung involvement and lack of significant hypoxia provided
1. SLE related evidence against ALP.
Lupus serositis (pleurisy or pericarditis)
Acute lupus pneumonitis
Shrinking lung syndrome Chronic interstitial disease
2. Musculoskeletal pain in the rib cage, i.e., In addition to these acute pulmonary manifestations, SLE
costochondritis is also associated with chronic interstitial lung disease,
3. Pulmonary embolism/infarction
which is seen in 3–13% of patients and typically presents
4. Infection related
with dry cough and dyspnea on exertion (7). Radiologic
Bacterial pneumonia (empyema or uncomplicated
parapneumonic effusion) findings include ground-glass and reticular infiltrates as
Atypical pneumonia (viral, Mycoplasma pneumoniae, well as honeycombing. Associated histologic patterns in-
Legionella species, Chlamydophila pneumoniae) clude nonspecific interstitial pneumonia, usual interstitial
Pleural tuberculosis pneumonia and, less often, lymphocytic interstitial pneu-
Fungal disease (aspergillosis, histoplasmosis, monia. In SLE, this entity is associated with anti-Ro anti-
cryptococcosis, pneumocystis) bodies (24 –26). Magro et al have found evidence for mi-
Nocardia/Actinomyces crovascular injury and IgG, IgA, and/or complement
Subphrenic abscess deposition in septal capillaries in patients with chronic
5. Drug induced, including drug-induced lupus, i.e.,
interstitial lung disease in the setting of various collagen
due to hydralazine, procainamide, etc.
vascular diseases, including anti-Ro–positive SLE (25,26).
6. Malignant or paramalignant effusions (non-
Hodgkin’s lymphoma, primary lung cancer, etc.) The same authors also found reactivity in sera from these
7. Selected miscellaneous causes patients against endothelial cells and suggested a possible
Uremic pleurisy pathogenic link between this antibody-mediated (Gell and
Post–cardiac injury syndrome Coombs type II immune reaction) microvasculopathy and
Ascites (it may represent serositis due to SLE) pulmonary fibrosis (26). In addition to anti-Ro, other anti-
Pancreatitis (acute or chronic) bodies such as aPL have also been implicated. Similar
microvascular injury and DIF findings were noted on the
* Effusions without pain may be due to nephrotic syndrome, hy-
poalbuminemia, heart failure, atelectasis, trapped lung (due to pre- TBBX of case 2.
vious severe SLE pleurisy), etc. SLE ⫽ systemic lupus
erythematosus.
Other potential causes
sensitive (17,18). In case 2, the pleural fluid was negative Another important consideration when dealing with acute
for ANA and lupus erythematosus cells, providing evi- pleurisy in SLE is pulmonary embolism, especially when
dence against SLE as the primary etiology of the effusion. patients are positive for aPL or have other risk factors for
These tests were not performed in case 1. The differential thromboembolic disease. Both cases were negative for aPL
diagnosis of pleurisy in SLE is shown in Table 2. and did not have other pulmonary embolism risk factors,
such as intake of oral contraceptives or prolonged immo-
bilization. In addition, pulmonary embolism was excluded
Acute lupus pneumonitis (ALP)
by CT angiography in case 1, and the chronic presentation
Other acute pulmonary manifestations of SLE include ALP of case 2 with marked lung consolidation was not consis-
and diffuse alveolar hemorrhage (DAH). ALP is relatively tent with pulmonary embolism. Another consideration in
uncommon, occurring in 1–12% of patients with SLE (19 – the differential diagnosis is malignancy, including bron-
23). The clinical presentation includes cough, pleurisy, chial carcinoma or lymphoma. However, both of our pa-
dyspnea, hypoxia, and patchy infiltrates, often with bilat- tients had disease courses that were marked by acute and
eral consolidations that resemble “bronchopneumonia” subacute flares of their pleurisy, providing evidence
(20,21,23). Given the indistinguishable clinical and radio- against this diagnosis and in favor of either active SLE or
graphic presentation from infectious etiologies of pneumo- infection. The absence of lymphadenopathy on chest CT
nia, establishing the diagnosis requires ruling out infec- scan and a negative history for smoking also provided
tious processes, often necessitating bronchoscopy. The evidence against malignancy.
histopathology of ALP often shows nonspecific findings,
such as diffuse alveolar damage with hyaline membranes
and interstitial edema (4,19). The presence of vasculitis Comparison of cases
and hematoxylin bodies with pleuritis is thought to be In case 1, influenza infection was identified. However,
more specific for SLE-induced disease (4,19). DAH is the there was concern for an alternate disease process, partic-
most severe acute pulmonary manifestation of SLE. These ularly given the dense consolidation and pleural effusion
patients typically present acutely, as in ALP, and often (both unusual in influenza), the lack of improvement with
present with hemoptysis and a precipitous drop in hemo- oseltamivir, and the broad infectious differential diagno-
globin. Imaging shows bilateral alveolar infiltrates and sis. The positive blood culture for S warneri was thought to
sequential BAL fluid reveals progressively more hemor- represent skin contamination because it grew in only one
rhagic lavage aliquots. Cytology is notable for hemosider- set of blood cultures and coagulase-negative staphylococci
in-laden macrophages. Our patients’ presentations and do not typically cause pneumonia. The 2 most likely eti-
1010 Gulati et al
DISCUSSION
These cases describe young women with SLE who pre-
sented with pleuritic chest pain, pleural effusion, and
Figure 3. Fibrinoid pleuritis with pleural edema and extensive pulmonary infiltrate. This is a relatively common clinical
deposition of fibrin on the pleural surface in case 1. scenario encountered by physicians who care for patients
Clinicopathologic Conference 1011
with SLE, and our cases offer several instructive points for in which the effusion was not due to infection, but rather
their management. Differentiating active lupus from infec- to SLE itself.
tion is the main challenge in such cases. This can be very The risk of Nocardia infection is significantly increased
difficult, since typically many of these patients have active in immunocompromised patients, and GC are an indepen-
lupus and at the same time are markedly immunosup- dent risk factor for nocardiosis (28,29). Lung infections
pressed. A meticulous microbiologic evaluation for infec- caused by Nocardia can manifest as single or multiple
tion, including opportunistic infection, should be per- lung nodules, reticulonodular infiltrates, lobar consolida-
formed in all cases. This often requires thoracentesis to tions with or without cavitation, and pleural effusions
obtain pleural fluid and bronchoscopy to obtain BAL fluid (30,31). Therefore, nocardiosis should be considered in
and TBBX samples. If these tests are negative but there is immunosuppressed patients with SLE, particularly those
still a strong suspicion for infection as in our cases, VATS receiving high doses of GC who have unexplained pulmo-
may provide a more definitive diagnosis (SLE-associated nary infiltrates. The lack of growth of Nocardia on BAL
fibrinous pleuritis in case 1 and Nocardia infection in case fluid and TBBX cultures in case 2 demonstrates the fastid-
2). ious nature of Nocardia and the difficulty in cultivating
Adding to the diagnostic challenge, GC, especially at these organisms by conventional cultures. These proper-
relatively high doses as in our cases, both alter the presen- ties explain why the time from onset of symptoms until
tation of infections and increase the spectra of possible diagnosis of pulmonary nocardiosis is typically more than
infectious etiologies. GC impair both innate and acquired 1 month (32). In case 2, the initiation of prophylactic
immunity and impair the generation of inflammatory ex- TMP/SMX 2 days prior to the bronchoscopy may also have
udates by decreasing the production of various proinflam- decreased the culture yield. If infection with Nocardia is
matory mediators (27). Clinically, these effects are mani- suspected, clinicians should ask the microbiology labora-
fested by a decreased febrile response and decreased lung tory to perform a modified acid-fast stain on respiratory
infiltrates and effusions. The fact that the pleural fluid in specimens that uses a weaker acid as a decolorizer rather
case 2 did not have clear features of empyema was possi- than a full acid-fast stain. This modification to the conven-
bly related to an antiinflammatory GC effect. Nevertheless, tional acid-fast stain allows the moderately acid-fast No-
despite high doses of GC, there was still substantial in- cardia to retain the initial stain and to be visualized (33).
flammation with development of adhesions and locula- Although routine aerobic culture media can support No-
tions of pleural fluid not only in case 2, but also in case 1, cardia, clinicians can also ask for selective media, such as
1012 Gulati et al
buffered charcoal yeast extract that is used to isolate Le- VATS, before one would expect a benefit from rituximab
gionella. These media are beneficial to support Nocardia or an increased dose of MMF. In case 2, the diagnosis was
because they decrease the overgrowth of other organisms not made until VATS was performed. These cases high-
in specimens obtained from nonsterile sites (33). In case 2, light the important role of VATS in patients with SLE and
a sputum specimen obtained before initiation of TMP/ pulmonary pathology of unclear etiology despite less in-
SMX prophylaxis during her initial hospitalization in our vasive diagnostic procedures.
institution that was sent for Legionella culture grew gram-
positive rods, which was the first clue that suggested no-
cardiosis. This case also highlights that Nocardia are not a FINAL DIAGNOSIS
component of the normal respiratory flora and should be
Case 1
considered a pathogen when grown from any respiratory
specimen (33). Finally, if Nocardia are suspected, the mi- Marked reactive fibrinous pleuritis due to active SLE with
crobiology laboratory should be instructed to hold respi- compression atelectasis of the adjacent lung. Mild chronic
ratory specimens for an extended period of time. Respira- interstitial lung disease due to SLE.
tory cultures are often discarded at 48 –72 hours, and
Nocardia often require a longer incubation period to grow Case 2
(33). Pneumonia and empyema due to Nocardia nova infection.
Although there are no randomized trials to determine Possible interstitial lung disease due to SLE.
the optimal treatment of nocardiosis, sulfonamides, such
as TMP/SMX, are considered the standard of therapy.
AUTHOR CONTRIBUTIONS
However, most authorities recommend initial combination
therapy, particularly given recent reports of emerging re- All authors were involved in drafting the article or revising it
critically for important intellectual content, and all authors ap-
sistance to TMP/SMX (34,35). Although clinical improve-
proved the final version to be published. Dr. Kirou had full access
ment is typically noted within 2 weeks of initiating ther- to all of the data in the study and takes responsibility for the
apy, prolonged antibiotic courses of up to 12 months are integrity of the data and the accuracy of the data analysis.
recommended because of high rates of relapse. Nocardia Study conception and design. Gulati, Magro, Kirou.
often invade blood vessels and have a propensity to cause Acquisition of data. Gulati, Satlin, Magro, Kirou.
Analysis and interpretation of data. Gulati, Magro, Kirou.
brain infections. In fact, the central nervous system (CNS)
is the most common extrapulmonary location for nocardi-
osis (28). Therefore, any symptoms of CNS disease warrant REFERENCES
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Clinicopathologic Conference 1013
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