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Genetic diversity affects colony survivorship in commercial honey bee


colonies

Article  in  The Science of Nature · June 2013


DOI: 10.1007/s00114-013-1065-y · Source: PubMed

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Naturwissenschaften (2013) 100:723–728
DOI 10.1007/s00114-013-1065-y

ORIGINAL PAPER

Genetic diversity affects colony survivorship in commercial


honey bee colonies
David R. Tarpy & Dennis vanEngelsdorp & Jeffrey S. Pettis

Received: 7 March 2013 / Revised: 16 May 2013 / Accepted: 22 May 2013 / Published online: 1 June 2013
# Springer-Verlag Berlin Heidelberg 2013

Abstract Honey bee (Apis mellifera) queens mate with when compared to colonies that were more genetically diverse
unusually high numbers of males (average of approximately (headed by queens with me >7.0). The stark contrast in colony
12 drones), although there is much variation among queens. survival based on increased genetic diversity suggests that
One main consequence of such extreme polyandry is an there are important tangible benefits of increased queen mat-
increased diversity of worker genotypes within a colony, ing number in managed honey bees, although the exact mech-
which has been shown empirically to confer significant anism(s) that govern these benefits have not been fully
adaptive advantages that result in higher colony productivity elucidated.
and survival. Moreover, honey bees are the primary insect
pollinators used in modern commercial production agricul- Keywords Genetic diversity . Social insects . Genotyping .
ture, and their populations have been in decline worldwide. Supersedure . Colony mortality
Here, we compare the mating frequencies of queens, and
therefore, intracolony genetic diversity, in three commercial
beekeeping operations to determine how they correlate with Introduction
various measures of colony health and productivity, partic-
ularly the likelihood of queen supersedure and colony sur- Insect pollinators are important in both natural and
vival in functional, intensively managed beehives. We found agroecosystems. It is of great concern, therefore, that there
the average effective paternity frequency (me) of this popu- have been documented widespread and drastic declines in
lation of honey bee queens to be 13.6±6.76, which was not their populations worldwide (Biesmeijer et al. 2006;
significantly different between colonies that superseded vanEngelsdorp and Meixner 2010). Western honey bees
their queen and those that did not. However, colonies that (Apis mellifera L.) are the predominant insect pollinator
were less genetically diverse (headed by queens with me ≤7.0) for many crops and are, hence, critical to agricultural econ-
were 2.86 times more likely to die by the end of the study omies (National Research Council 2007; Gallai et al. 2009).
Understanding the governing factors of increased colony
mortality is, therefore, of fundamental concern.
Communicated by: Sven Thatje
In the US, the majority of the active pollination by honey
D. R. Tarpy (*) bees is done by large-scale, migratory beekeeping opera-
Department of Entomology, North Carolina State University,
tions that transport their beehives in and out of blooming
Campus Box 7613, Raleigh, NC 27695-7613, USA
e-mail: david_tarpy@ncsu.edu crops over the course of a growing season. While actively
managed (sometimes intensively so), honey bees are not
D. vanEngelsdorp domesticated in the strict sense and are, therefore, subject
Department of Entomology, University of Maryland, 3136 Plant
to many environmental and ecological factors (Harpur et al.
Sciences Building,
College Park, MD 20742-4454, USA 2012; Oldroyd 2012). The susceptibility to multiple envi-
e-mail: Dennis.vanEngelsdorp@gmail.com ronmental stressors, ranging from parasites and pathogens to
foraging constraints, makes understanding the biological
J. S. Pettis
mechanisms that govern colony function a particularly in-
USDA–ARS Bee Research Laboratory, Bldg. 306 BARC-E,
Beltsville, MD 20705, USA sightful approach to elucidating factors that result in poor
e-mail: Jeff.Pettis@ars.usda.gov health. Central to colony function is the single queen of a
724 Naturwissenschaften (2013) 100:723–728

honey bee colony, the mother to tens of thousands of daugh- longitudinal study (vanEngelsdorp et al. 2013) that mea-
ter workers sired from the stored sperm from her one to two sured overall colony phenotype in an effort to temporally
dozen mates (Winston 1987). Such extreme multiple mating assign predictive associations during colony collapse events.
(polyandry) early in a queen's lifetime has profound ramifi- The current study, however, took a predictive descriptive
cations on the resultant intracolony genetic diversity of the approach to determine the consequence of established colo-
colony's workforce that, in turn, has been shown to influ- ny diversity on subsequent colony phenotypes. Understand-
ence a wide variety of colony phenotypes (see below). It is ing how a colony's “sociogenome” (sensu Linksvayer et al.
yet unclear, however, if genetic diversity within colonies has 2009) may influence colony productivity in a “real-world”
any bearing on actively managed colonies in commercial context may provide insights into the causes of the decline
beekeeping operations. in colony health and mechanisms by which to mitigate it. In
Aside from supplying enough sperm for her egg-laying doing so, this study investigates the largest number of honey
lifetime, one main consequence of polyandry is an increased bee colonies to date for their phenotypic effects of
diversity of the genotypes of workers within a colony. This intracolony genetic diversity.
increased intracolony genetic diversity has been shown em-
pirically to confer significant adaptive advantages, including
homeostatic stability (Oldroyd et al. 1992; Fuchs and Materials and methods
Schade 1994; Jones et al. 2004; Mattila and Seeley 2007;
reviewed by Oldroyd and Fewell 2007), reduced risk of As detailed in vanEngelsdorp et al. (2013), we monitored 81
brood pathogens (Palmer and Oldroyd 2003; Tarpy 2003; colonies operated by three different migratory beekeepers
Seeley and Tarpy 2007), and moderated heterozygosity at between March 2007 through to January 2008. The selected
the sex locus (Page 1980; Tarpy and Page 2002), all of colonies were a subset of large commercial beekeeping
which result in higher colony productivity and survival. operations that trucked their colonies north and south along
Much of this benefit is achieved within the first few matings the eastern United States to pollinate crops or produce
by queens, as average genetic diversity within colonies is a honey (or both) on a diverse variety of crops and natural
nonlinear function of mating number, and 83 % of the total vegetation in several states. We divided the colonies in
possible genetic variation arises within an effective paternity Operation 1 (OP1) into two groups. The first set of colonies
frequency of 7.0 (Fig. 1). Nonetheless, it follows that (OP1pac) were established from 4-lb. packages of bees
hyperpolyandry and the resultant increased colony genetic (~12,000 adult workers) imported from Australia in Febru-
diversity may have significant effects on managed queen ary 2007. The packages were installed into previously used
and colony health, as it lies at the interface between parasite bee equipment from colonies that had died in the previous
prevalence, colony fitness, and queen reproductive success. 3 months with symptoms indicative of Colony Collapse
In this study, we compare the mating frequencies, and Disorder (vanEngelsdorp et al. 2009). Of the 19 packages
therefore the intracolony genetic diversity, of queens in three successfully installed, 10 colonies were headed by Austra-
commercial beekeeping operations to determine how they lian queens, while the remaining nine were headed by
correlate with various measures of colony health and sur- queens produced commercially in Hawaii. The second set
vival. The study was conducted in conjunction with a larger of colonies (n=20) in Operation 1 (OP1est) were randomly
Fig. 1 The effect of extreme 1.00
polyandry on colony genetic
Proportion
diversity. As the effective
paternity frequency (me) of a
maximum diversity
queen's brood increases, the 0.75
average genetic relatedness
among nestmates (G) 86% increase of
asymptotically decreases as a minimum diversity
function of 0.25+(2me)−1. As 0.50
mating number increases and
genetic relatedness decreases,
the total intracolony genetic
diversity asymptotically 0.25
increases from 0 % of its Average intracolony
maximum at me =1 (G=0.75) to genec diversity (G)
100 % at me =∞ (G=0.25). At
an effective paternity of 7.0, a 0.00
full 83 % of the total possible
1 7 13 19 25 31 37
increased genetic diversity is
achieved Effective paternity frequency (me) of the colony
Naturwissenschaften (2013) 100:723–728 725

selected established colonies that had survived the previous We then calculated the observed paternity number (No) of
winter, did not show symptoms of CCD, and were typical of each queen by simply tabulating the number of different
the bees surviving in that beekeeper's operation. Colonies in drone fathers that were represented among her sampled
both of the other two operations (OP2, n=24; and OP3, n=18) offspring as well as the effective paternity frequency (me)
were also established colonies that had survived the previous according to Nielsen et al. (2003) to account for unequal
winter in their respective operations. These two later opera- representation of drone fathers among the offspring. To
tions had not experienced CCD-like symptoms prior to the quantify our degree of certainty for these estimates, we
survey's initiation. calculated the nondetection error according to Boomsma
During the first inspection, we collected samples of adult and Ratnieks (1996) to account for limited allelic diversity
bees, placed them on dry ice until storage at −80 °C was within each commercial population as well as the 95 % CI
possible, and later genotyped the workers to infer queen around each individual estimate of me following Tarpy and
mating number (see below). During the first inspection, we Nielsen (2002) to account for sampling error at finite sample
found the queen in each colony, marked her with colored sizes within each colony.
paint, and clipped one pair of her wings to help identify her
presence during subsequent inspections. For each subse- Statistical analyses
quent inspection, we attempted to locate the marked queen
to verify that she was the mother of the genotyped workers. We used one-way ANOVA to compare mating frequency
In cases where the queen was not observed directly, we among the colonies headed by queens from different queen
noted the evidence of her presence (i.e., ample eggs and sources. We employed a t test for comparisons of effective
young larvae). We also noted instances that suggested the paternity frequencies between colonies that superseded and
queen had been replaced or was in the process of being those that did not. We used standard regression to determine
superseded (e.g., mature queen replacement cells and the the relationship between effective paternity frequency and
presence of unmarked virgin queens). We inspected all queen longevity and other colony health measures that gen-
colonies, on average, every 50 days over the course of erated continuous data (e.g., colony population and varroa
1 year. During these inspections, we conducted colony mite prevalence). Finally, we calculated the relative risk
strength measures (adult worker population, brood area associated with an effective mating frequency of 7 or fewer
and quality, and queen condition), acquired samples to de- and colony survival over the entire course of the study, the
termine the prevalence of various parasites (Varroa significance of which was determined using the Fisher's
destructor and Nosema species), and noted overt symptoms exact test (see vanEngelsdorp et al. 2013b). All analyses
of various brood and adult diseases (chalkbrood, European were performed using JMP statistical package (SAS 2007).
and American foulbrood, Idiopathic Brood Disease Syn-
drome, and Deformed wing virus (DWV) and Sacbrood
(SBV) (reported in vanEngelsdorp et al. 2013). Results

Laboratory analyses We successfully genotyped 3,098 workers belonging to 79


colonies (39.2±3.31 workers per colony), a total that ex-
We extracted the DNA from 30 to 45 adult workers from each cludes a large number of “drifters” that were determined to
colony using Puregene® DNA extraction kits (Gentra Sys- be of different maternal origins from the sampled colonies.
tems, Inc.) according to manufacturer's specifications for an- Overall, we found the average observed mating number (No)
imal tissue. Specifically, we extracted DNA from each ani- of the queens to be 14.7±4.31. Accounting for unequal
mal's gaster and performed PCR at eight microsatellite loci to paternal representation within each sample, we found the
infer the paternal genotype of each worker. We performed two average effective paternity frequency (me) to be 13.6±6.76
separate multiplex reactions, each with four microsatellite (95 % CI 3.6±1.61) subfamilies. These estimates are well
primer sets that have been published previously (Estoup et within the expected range of A. mellifera mating frequencies
al. 1994, 1995; Solignac et al. 2003; see Tarpy et al. 2010; (Tarpy et al. 2004).
Delaney et al. 2011). We excluded microsatellite A76 from
our analyses, since it did not provide consistent PCR products. Effective paternity frequency and queen source
Using the program Colony 1.2 (Wang 2004), we then used the
allelic data to assign worker paternity and calculate the num- The queens heading colonies that were successfully geno-
ber of subfamilies in each colony. typed at the start of this study represented five different
We excluded any worker from a colony that did not sources: the stock usually produced or purchased by the
follow Mendelian inheritance, as these individuals were cooperating beekeepers (OP1est: n=20, OP2: n=24, and
likely foreign bees that had “drifted” from nearby beehives. OP3: n=17) and the stock introduced with installed
726 Naturwissenschaften (2013) 100:723–728

Table 1 Comparisons of different measures of colony phenotype with syndrome (IBDS), sacbrood virus (SBV), queen events (e.g., supersedure),
effective paternity frequency (me). Standard regression analyses on the varroa mites, and nosema. The relative risk analyses calculate the increased
continuous variable of me with each variable resulted in no statistically likelihood of each factor for colonies headed by queens with me ≤7.0 versus
significant relationships with the prevalence of poor brood patterns, those with me >7.0. RR for varroa and nosema could not be calculated
chalkbrood disease, deformed wing virus (DWV), idiopathic brood disease because they were ubiquitous in all colonies through the course of the study

Variable Regression analysis (continuous) Relative risk analysis (discrete)

Prevalence (mean %±SE) r2 P Relative risk (95 % CI) P

Poor pattern 0.29±0.027 +0.0001 0.98 0.97 (0.66–1.43) 0.58


Chalkbrood 0.18±0.03 −0.004 0.55 0.96 (0.47–1.98) 0.97
DWV 0.06±0.012 +0.001 0.77 0.58 (0.15–2.20) 0.32
IBDS 0.048±0.011 −0.016 0.27 0.74 (0.19–2.84) 0.49
SBV 0.19±0.229 +0.017 0.24 0.79 (0.11–5.91) 0.65
Queen event 0.13±0.0.02 −0.005 0.52 0.59 (0.21–1.66) 0.89
Varroa 0.30±0.022 −0.012 0.32 n.a. n.a.
Nosema 0.50±0.024 −0.006 0.46 n.a n.a.

packages (Hawaii: n=9, Australian: n=9). We found no correlated with the estimated time it took for queens to
difference in the effective paternity frequency among these supersede (r2 =0.09, P=0.09), but we found a negative cor-
different sources of queens (F4,74 =0.64, P=0.635). relation between effective paternity frequencies of supersed-
ed queens and their survival (t29 =−2.40, p<0.05).
Effective paternity frequency and queen supersedure When we excluded data collected after colonies were
found to have superseded (as to correlate measured colony
A total of 31 (39.2 %) of the genotyped colonies superseded phenotypes with effective paternity of the genotyped
their queen at least once over the course of the study. queens), we found no evidence of consistent relationships
Effective paternity frequency was not different between between effective paternity frequency and the incidence of
colonies that superseded their queens as compared to those disease or colony size measures over the entire data set,
that did not (t77 =−0.91, P=0.18). The queens that were during any specific inspection, or at the time of initial
superseded over the course of the study lived an average inspection (Table 1; see vanEngelsdorp et al. 2013 for de-
of 76.6±13.23 days. Effective paternity frequency was not tails). However, there was no empirical control of pathogen
exposure among the colonies, as they were not inoculated
Less diverse
(me < 7.0)
More diverse
(me > 7.0)
with disease, and overall incidence was low for most mea-
n =2 n = 28
sured parasites and pathogens because of control measures
Colony longevity (months alive)

Colony lived
taken by the beekeepers. As such, we found no evidence of
increased/decreased relative risk for the occurrence of dis-
ease and effective mating number (Table 1).
Colony died
Effective paternity frequency and colony survival

The number of effective matings did not differ between colo-


n =9 n = 39 nies that survived versus those that did not for the entirety of
the study (t77 =0.68, P=0.496). However, there was a positive,
Effective paternity frequency (me) albeit nonsignificant, trend between effective paternity fre-
quency and the survival (in months) of experimental colonies
Fig. 2 Measured influence of genetic diversity (as measured by effec- (Fig. 2), where there was a nonlinear (logistic) effect of queen
tive paternity frequency) on colony longevity. As queen mating num- mating number on how long her resultant colony survived
ber increases (x axis), the associated longevity of her colony (y axis)
increases logarithmically (yellow line). Parsing the measured colonies (r2 =0.046, P=0.06). Most importantly, colonies headed with
into categories that were either genetically diverse (me >7.0; unshaded) queens that had an effective mating of 7.0 or less were 2.86
or less diverse (me ≤7.0; blue shaded) compared to those that survived times more likely to die by the end of this study when
(unshaded) or died (red shaded) over the course of the experiment, compared to colonies headed by queens with an effective
there was a significant of increased genetic diversity on survival; more
genetically diverse colonies were 2.86 times more likely to survive paternity greater than 7.0 (Relative Risk (RR)=2.86; (95 %
compared to less diverse colonies CI 0.79–10.40); Fisher's exact test P<0.05).
Naturwissenschaften (2013) 100:723–728 727

Discussion the range of naturally mated queens in active beekeeping


operations.
vanEngelsdorp et al. (2008) report the survey results from The theoretical threshold of effective paternity frequency
305 beekeeping operations in the US accounting for 13.3 % of 7.0 is somewhat arbitrary, as any other threshold could be
of the managed honey bee colonies nationwide. In that chosen for means of comparison. As Page (1980) noted, and
survey, beekeepers self-reported that starvation (28 %), further expanded by Palmer and Oldroyd (2000) among
varroa mites (24 %), and symptoms consistent with Colony others, a mating frequency of 6 is the inflection point of
Collapse Disorder (9 %) were significant suspected factors average intracolony relatedness (see Fig. 1). However, in the
in colony losses. However, the primary perceived problem current study, this cutoff point of 7 was found to be partic-
for beekeepers was “poor queens” (31 %). Arguably, the ularly relevant with respect to colony survival. It would be
single most important attribute of a queen's “quality” is how interesting to verify if this level of genetic diversity holds
well she is mated. Previous findings suggest that most some bearing on other concrete, measureable phenotypes
commercially produced queens do not exhibit low mat- such as disease prevalence or colony homeostasis.
ing frequencies (see also Delaney et al. 2011; Tarpy et In conclusion, we do not find consistently strong effects
al. 2012), but our observed distinction between colonies of effective mating frequency on the specific measures of
of low and high genetic diversity provides increased colony health and productivity in honey bees managed in
emphasis on ensuring that beekeepers are provided with commercial settings. However, we did detect a striking
sufficiently mated queens. effect of a threshold effective paternity frequency (me =7)
Neumann and Moritz (2000) correlated the mating num- on overall colony survival. This suggests that, even in the
bers of queens and the levels of varroa mites in their colo- noisiest, least-controlled experimental environment (i.e.,
nies, and they found no significant relationship between the functioning migratory commercial beekeeping operations),
two. In the present study, we found a significant negative intracolony genetic diversity as a consequence of queen
nonlinear correlation between varroa and mating number multiple mating has a detectable and positive impact on
during 1 month's measurements, although this effect was overall colony phenotype and longevity. Future efforts
not persistent through the course of the study (Table 1). should focus on the mechanism(s) by which this benefit is
Thus, while previous findings have shown strong effects manifest.
of manipulated genetic diversity on the prevalence of vari-
ous brood diseases (Palmer and Oldroyd 2003; Tarpy 2003; Acknowledgments We thank the three participating beekeepers for
their assistance in this project as well as Michael Andree, Karen
Tarpy and Seeley 2006; Seeley and Tarpy 2007), it is
Roccasacca, Linda Wertz, and Nishit Patel and Nathan Rice for help
unclear if there is a similar relationship with adult parasites in collecting and processing samples. We would like to thank Joel
at natural levels of genetic diversity. Caren, John Harman, Deborah Delaney, Winnie Lee, Flora Lee,
Richard et al. (2007) showed that mating number affects Mithun Patel, and Matt Mayer for their help in DNA extractions and
PCR analyses. This study was supported by the National Research
queen attractiveness to workers and their pheromone pro-
Initiative of the USDA Cooperative State Research, Education and
files. This suggests that supersedure rates might increase Extension Service, grant number 2007–02281, USDA-ARS as well
with poorly mated queens (see also Niño et al. 2012). Our as by grants from the North Carolina Department of Agriculture and
data are not consistent with this prediction at natural mating Consumer Services and the National Honey Board.
levels (as opposed to instrumentally inseminated queens
with artificially low mating numbers). In fact, we found a
negative correlation between effective paternity frequencies
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