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Synthesis of Hydrazones from Amino Acids and their Antimicrobial and Cytotoxic
Activities
Hydrazones 6a–6n were synthesized from different amino acids with various aldehydes under
reflux in methanol/ethanol. The structures of synthesized compounds were ascertained by elemen-
tal analysis and spectroscopic techniques. A comparative study of the antimicrobial activity and
cytotoxicity was carried out of the N-protected amino acids, their esters, hydrazides, and the
respective hydrazones, providing good results in cytotoxicity studies.
J. Chin. Chem. Soc. 2017 © 2017 The Chemical Society Located in Taipei & Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim 1
Article Abid et al.
material appeared in solution, to which ice and hydro- indicated the synthesis of the hydrazide. Each hydrazide
chloric acid (dil + cold) were added till the pH reached (4a–4c) was dissolved in 5 mL of ethanol by stirring,
3. After filtration and washing with cold distilled water, and an equivalent mmol of the aldehyde and few drops
the benzoyl-protected amino acid was dried. IR spectro- of acetic acid were added. The solution was refluxed for
scopic data indicated the completion of protection of 3–9 h, and then the product formed was filtered by add-
the amino group by the disappearance of two separate ing cold distilled water and dried. Products (6a–6n)
bands for the NH2 asymmetric and symmetric stretch- were characterized by elemental analysis and spectro-
ing vibrations, whereas only one band for NH stretch- scopic data. The results of elemental analysis were in
ing appeared in the range 3365–3296 cm−1. Appearance good agreement with the proposed stoichiometry. IR
of amidic carbonyl bands in the range 1692–1646 cm−1 spectroscopic data indicated the formation of imines by
and aromatic C C bands in the range 1578–1542 cm−1 the disappearance of two separate bands for the NH2
also indicated the successful protection. asymmetric and symmetric stretching vibrations. The
Each protected amino acid (2a–2c) was dissolved appearance of the imine (C N) band in the range
separately in dry methanol, a few drops of sulfuric acid 1651–1589 cm−1 also indicated the synthesis of imines.
were added, and reaction was refluxed for 10–19 h. The In the 1H NMR spectra, the presence of NH and imine
solvent was removed using a rotary evaporator. The CH protons in the range 12.20–7.93 ppm and the rele-
remaining material was then worked up. IR spectro- vant aromatic protons of the protecting group and the
scopic data indicated the formation of the ester by the aldehyde group confirmed the synthesis of the desired
disappearance of broad band due to the OH group cen- products. Electrospray ionization mass spectrometry
tered near 3000 cm−1. The appearance of ester carbonyl (EI-MS) results showed the molecular ion peaks in only
band in the range 1742–1718 cm−1 indicated the suc- two cases, whereas the fragment with m/z 105 (benzoyl
cessful esterification. cation) mostly appeared as a prominent fragment and
Each ester (3a–3c) was separately dissolved in eth- as base peak in six cases. The confirmation of target
anol, and then hydrazine hydrate was added and molecules was finally achieved through high-resolution
refluxed for 3–11 h. The solvent was removed, and the mass spectrometry (HRMS) (Scheme 1 and Table 1).
product was filtered, washed with hexane, and dried. IR
spectroscopic data indicated the formation of hydra- Biological activity
zides by appearance of two separate bands for NH2
asymmetric (3485–3458 cm−1) and symmetric Antimicrobial activity The newly synthesized com-
(3298–3269 cm−1) stretching vibrations in addition to pounds were investigated for their antimicrobial activity
the NH band. Disappearance of the ester carbonyl against a panel of Gram-positive and Gram-negative
band and the appearance of a broad band for two the pathogenic bacteria and fungi. The test strains included
amidic carbonyls in the range 1678–1649 cm−1 also Staphylococcus aureus, MRSA (methicillin-resistant
S. aureus), Escherichia coli, Klebsiella sp., Actinobacter
O H R
sp., and Candida albicans. In this analysis, the protected
H R O H R
(a) (b) amino acids, esters, hydrazides, and hydrazones with
H2N COOH N COOH N COOMe
H H diverse aldehydes were studied comparatively. Each of
(1a-c) (2a-c) (3a-c) the compounds exhibited a different of antimicrobial
R=H, CH3, CH2CH(CH3)2 (c) response against the different tested strains. The com-
pound 6k exhibited good antimicrobial activity against
O H R R1 O H R
Gram-negative bacteria such as E. coli and against
NHN (d) NHNH2
N C N C
H H 1
H C. albicans with inhibitory zones of 20 and 19 mm,
O R CHO O
respectively. Compounds 2a, 2c, 3a, 4b, 4c, 6a, 6b, and
(6a-n) (5a-h) (4a-c)
6c showed moderate to low antimicrobial activity
Scheme 1. Synthesis of Schiff bases (a) PhCOCl,
MeOH (b) dry MeOH, conc. H2SO4, against Gram-positive bacteria, and inhibitory zones in
reflux (c) MeOH, hydrazine hydrate the range of 7 to 16 mm were observed against
80%, reflux (d) MeOH, R1CHO, reflux. S. aureus and MRSA. Compounds 3b, 3c, 4a, and 6i,
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JOURNAL OF THE CHINESE
Hydrazones from Amino Acids CHEMICAL SOCIETY
6b H
J. Chin. Chem. Soc. 2017 © 2017 The Chemical Society Located in Taipei & Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim www.jccs.wiley-vch.de 3
Article Abid et al.
Antimicrobial activity against MDR bacteria and fungi Minimum inhibitory concentrations
(zone of inhibition in mm) (MICs) μg/mL
Sample codes S. aureus MRSA E. coli Kleb Acineto Candida albicans S. aureus E. coli
2a 14 18 — — — — 32 —
2b — 10 — — — — — —
2c 12 12 — 10 — — 64 —
3a 10 11 — 09 — — 64 —
3b — — — — — — — —
3c — — — — — — — —
4a — — — — — — — —
4b 09 13 — 10 — — 128 —
4c 12 16 — 10 — — 64 —
6a 10 14 — 07 — — 128 —
6b 10 11 — — — — — —
6c 07 12 — — — — 128 —
6d — — — 09 08 — — —
6e 10 — — — — — 128 —
6f 10 — 10 — 10 12 128 256
6g — — — — — 10 — —
6h — — 19 08 11 13 — 32
6i — — — — — — — —
6j 16 — 16 12 10 18 32 32
6k — — 20 10 09 18 — 16
6l — — 10 — — — — —
6m 12 — 10 — 14 07 64 64
6n — — 14 — — 10 — 64
Kleb, Klebsella sp.; Acineto, Acinetobacter sp.
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JOURNAL OF THE CHINESE
Hydrazones from Amino Acids CHEMICAL SOCIETY
acetic acid, hydrazine hydrate (80%), distilled water, hex- filtered. The solvent was evaporated to obtain the
ane, dichloromethane, ethyl acetate, acetone, chloroform, product.
and different aldehydes. All the chemicals used were of
analytical grade and were purchased from Merck, Riedel- Procedure for the synthesis of hydrazides
deHaen, Scharlau, Aldrich, or Fluka. Six millimoles of the ester was dissolved in 4 mL
All synthesized compounds were characterized by methanol by stirring in a round-bottom flask, and then
their physical constants as well as spectroscopic data 1.5 mL of hydrazine hydrate was added and refluxed
such as IR, 1H NMR, GC-MS, HRMS, and elemental for 3–11 h in a reflux condenser. The solvent was
analysis. Thin-layer chromatography (TLC) was per- removed, and the product was filtered, washed with
formed on precoated silica gel GF-254 aluminum plates n-hexane, and dried.
(Kieselgel 60, 20 × 20, 0.2–0.5 mm thick; E. Merck,
Procedure for the synthesis of hydrazones
Germany). Detection under UV light illumination was
One millimole of hydrazide was dissolved in 5 mL
done with 254 and/or 366 nm. Melting points were
of ethanol by stirring in a round-bottom flask, and an
determined on a Sanyo Gallenkamp digital melting
equivalent mmol of aldehydes and few drops of acetic
point apparatus (MPD 350) in open capillaries. 1H
acid were added. The solution was refluxed for 3–9 h,
NMR was carried out on a Bruker ARX 300 spectrome-
and the product was filtered, washed by cold distilled
ter. Mass Spectroscopy was carried out on AMD
water, and dried. Characteristic data for all the synthe-
MS40, AMD 402 (AMD Intectra), Varian MAT CH
sized compounds 6a–6n are given in detail below.
7, MAT 731, and HRMS on Finnigan MAT 95 or Var-
ian MAT 311, Bruker FTCIR, AMD 402 (AMD Intec- N0 -(Anthracene-10-ylmethylene)-2-benzamidoacetohydra-
tra) instruments. IRs spectra were recorded on a Bruker zide 6a
IFS 66 (FT IR), Nicolet 205 FT IR, Nicolet Protege Yellow powder; Yield: 89%; m.p: 202–205 C; IR
460, or Nicolet 360 Smart Orbit (ATR) instrument −1
(cm ): 3352 (NH), 1680 (C O), 1643(C N), 1537
using KBr and ATR. The elemental analyzer used was (C C); Elemental analysis: calcd. for C24H19N3O2: C,
LECO CHNS-932 or Thermoquest Flash EA 1112. 75.57; H, 5.02; N, 11.02, Found: C, 75.69; H, 4.91; N,
11.18; 1H NMR (DMSO-d6, 300 MHz); δ 11.72 (s, 1H,
Procedure for the N-protection of amino acids NH), 8.77–8.74 (m, 2H, NH/CH), 8.63(d, 2H,
Ten millimoles of the amino acid was dissolved J = 6.6 Hz, Ar–H), 8.17 (d, 2H, J = 8.4 Hz, Ar–H),
2.5 mL of NaOH (10%). Then, 1.5 mL of benzoyl chlo- 7.98–7.92 (m, 2H, Ar–H), 7.69–7.48 (m, 8H, Ar–H),
ride was added, and the solution was stirred for 3–4 4.49 (d, 2H, J = 6.0 Hz, CH2); MS (GC, 70 eV): m/z
h. A solid material was obtained, which was further (%): 204(16), 203(100), 202(10), 176(9), 175(8), 150(5),
acidified with hydrochloric acid (dilute + cold) to pH 3. 101(7), 88(11), 75(6); HRMS Pos (ESI) calcd. for
After filtration and washing by cold distilled water, the C24H19N3O2 [M + H,]+ 382.155, Found 382.15492 and
benzoyl-protected amino acid was dried and then [M + Na]+ calcd. 404.13695, Found 404.1369 and the
weighed. exact ion mass is 381.14773.
N0 -(p-Biphenylmethylene)-2-benzamidoacetohydrazide 6b
Procedure for the esterification of N-protected amino Light brown powder; Yield: 86%; m.p:
acids 238–239 C; IR (cm−1): 3315 (NH), 1687 (C O),1634
The protected amino acid (8.0 mmol) was dis- (C N), 1547 (C C); Elemental analysis: calcd. for
solved in 5 mL of dry methanol in a round-bottom C22H19N3O2: C, 73.93; H, 5.36; N, 11.76. Found: C,
flask, and a few drops of sulfuric acid were added. The 73.87; H, 5.19; N, 11.94. 1H NMR (DMSO-d6,
solution was stirred and refluxed for 10–19 h. After 300 MHz); δ 11.58 (s, 1H, NH), 8.71 (t, 1H,
completion of the reaction, the solvent was evaporated J = 6.6 Hz, NH), 8.06 (s, 1H, CH), 7.92(d, 2H,
and ethyl acetate was added, and the solution was J = 6.3 Hz, Ar–H), 7.82–7.77 (m, 4H, Ar–H), 7.73 (d,
washed with NaHCO3 solution and distilled water. 2H, J = 8.7 Hz, Ar–H), 7.57–7.47 (m, 5H, Ar–H), 7.41
Then MgSO4 was added and the organic layer was (d, 1H, J = 6.3 Hz, Ar–H) 4.46 (d, 2H, J = 6.0 Hz,
J. Chin. Chem. Soc. 2017 © 2017 The Chemical Society Located in Taipei & Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim www.jccs.wiley-vch.de 5
Article Abid et al.
CH2); MS (GC, 70 eV): m/z (%): 358 (M + 1+,1), C28H27N3O2 : C, 76.86; H, 6.22; N, 9.60, Found: C,
357 (M+, 5), 223(10), 197(15), 196(83), 195(13), 179 76.69; H, 6.17; N, 9.81; 1H NMR (DMSO-d6,
(13), 167(12), 165(27), 152(16), 135(13), 134(27), 105 300 MHz); δ 12.11 (s, 1H, NH), 9.69 (s, 1H, NH), 8.79
(100), 77(52), 51(11); HRMS (EI) calcd. for (s, 1H, CH), 8.75 (d, 2H, J = 6.6 Hz, Ar–H), 8.18 (d,
C22H19N3O2 [M+]: 357.14718, Found: 357.1483. 2H, J = 6.3 Hz, Ar–H), 8.05 (d, 2H, J = 6.3 Hz, Ar–
H), 7.70–7.58 (m, 8H, Ar–H), 4.44 (dd, 1H,
2-Benzamido-N0 -(quinolin-2-ylmethylene)acetohydrazide 6c J = 8.0,7.5 Hz, CH), 1.88–1.79 (m, 3H, CH/CH2), 0.92
Light brown powder; Yield: 93%; m.p: (d, 3H, J = 6.3 Hz, CH3), 0.85 (d, 3H, J = 6.3 Hz,
226–229 C; IR (cm−1): 3391 (NH), 1697 (C O),1641 CH3); MS (GC, 70 eV): m/z (%): 204(19), 203(100), 202
(C N), 1538 (C C); Elemental analysis: calcd. for (12), 176(13), 174(8), 88(10), 75(8), 61(6); HRMS Pos
C19H16N4O2: C, 68.66; H, 4.85; N, 16.86. Found: C, (ESI) calcd. for C28H27N3O2, [M + H]+ calcd.
68.83; H, 4.77; N, 16.72; 1H NMR (DMSO-d6, 438.13354, found 438.13364 and [M + Na]+ calcd.
300 MHz); δ 11.90 (s, 1H, NH), 8.78 (t, 1H, 460.11548, found 460.11583; exact ion mass 437.12626.
J = 6.6 Hz, NH), 8.42 (d, 1H, J = 8.7 Hz, Ar–H), 8.21
(s, 1H, CH), 8.14 (d, 1H, J = 8.7 Hz, Ar–H), 8.05–8.0 N0 -(2,4-Dihydroxybenzylidene)-2-benzamido-4-methylpe-
(m, 2H, Ar), 7.93 (d, 2H, J = 6.6 Hz, Ar–H), 7.80 (dt, ntanehydrazide 6h
1H, J = 6.6, 2.7 Hz, Ar–H), 7.64 (dt, 1H, J = 6.6, Dark brown powder; Yield: 72%; m.p:
2.7 Hz, Ar–H), 7.57–7.50 (m, 3H, Ar–H), 4.53 (d, 2H, 204–209 C; IR (cm−1): 3318 (NH), 1688 (C O), 1651
J = 6.0 Hz, CH2); MS (GC, 70 eV): m/z (%): 290(5), (C N), 1561 (C C); Elemental analysis: calcd. for
198(54), 170(62), 142(68), 115(82), 105(100), 77(71), C20H23N3O4: C, 65.03; H, 6.28; N, 11.37, Found: C,
51(18); HRMS Pos (ESI) calcd. for C19H16N4O2 65.16; H, 6.45; N, 11.20; 1H NMR (DMSO-d6,
[M + H]+ calcd. 333.1346, Found: 333.13527 and 300 MHz); δ 11.60 (s, 1H, NH), 9.33 (bs, 2H, OH),
[M + Na]+ calcd. 355.11655, Found 355.11638; exact 8.54 (d, 1H, J = 8.7 Hz, NH), 8.27 (s, 1H, CH), 7.90
ion mass 332.12733. (d, 2H, J = 6.6 Hz, Ar–H), 7.57 (d, 1H, J = 6.6 Hz,
N0 -(3,5-Dimethoxybenzylidene)-2-benzamidoacetohydraz- Ar–H), 7.53 (d, 2H, J = 6.3 Hz, Ar–H), 7.26 (d, 1H,
ide 6d J = 3.0 Hz, Ar–H), 6.94 (dd, 1H, J = 6.3,3.0 Hz, Ar–
Floral white powder; Yield: 91%; m.p: 174–175 C; H), 6.79 (d, 1H, J = 8.7 Hz, Ar–H), 4.51 (dd, 1H,
IR (cm−1): 3255 (NH), 1687 (C O),1631 (C N), 1573 J = 8.0, 7.5 Hz, CH), 1.94–1.88 (m, 3H, CH/CH2),
(C C); Elemental analysis: calcd. for C18H19N3O4: C, 0.91 (d, 3H, J = 6.3 Hz, CH3), 0.87 (d, 3H, J = 6.3 Hz,
63.33; H, 5.61; N, 12.31, Found: C, 63.47; H, 5.53; N, CH3); MS (GC, 70 eV): m/z (%): 256(22), 135(24), 122
12.44; 1H NMR (DMSO-d6, 300 MHz); δ 11.51 (s, 1H, (32), 105(100), 77(47), 51(14), 29(11); HRMS Pos (ESI)
NH), 8.70 (t, 1H, J = 6.6 Hz, NH), 7.93 (s, 1H, CH), calcd. for C20H23N3O4 [M + H]+ calcd. 370.17613,
7.90 (d, 2H, J = 6.6 Hz, Ar–H), 7.56–7.49 (m, 3H, Ar), Found 370.17713; [M + Na]+ calcd. 392.15808, Found
6.86 (t, 2H, J = 3.0 Hz, Ar–H), 6.55(t, 1H, J = 3.0 Hz, 392.15769, exact ion mass 369.16886.
Ar–H), 4.42 (d, 2H, J = 6.3 Hz, CH2), 3.78 (s, 6H,
2OCH3); MS (GC, 70 eV): m/z (%): 341 (M+, 1), 207 N0 -(p-Biphenyl)-2-benzamido-4-methylpentanehydrazide 6i
(26),180(18), 178(11), 153(17), 135(11), 134(24), Floral white powder, Yield: 89%; m.p: 234–238 C;
105 (100), 77 (67), 51 (14); HRMS Pos (ESI) calcd. for IR (cm−1): 3345 (NH), 1672 (C O), 1619 (C N), 1558
C18H19N3O4 [M + H]+; calcd. 342.14483, Found (C C); Elemental analysis: calcd. for C26H27N3O2: C,
342.14496, and [M + Na]+ calcd. 364.12678, Found 75.52; H, 6.58; N, 10.16, Found: C, 75.82; H, 6.73; N,
364.12699; exact ion mass 341.13756. 10.03; 1H NMR (DMSO-d6, 300 MHz);δ 11.89 (s, 1H,
NH), 8.52 (s, 1H, CH), 7.94 (d, 2H, J = 6.60 Hz, Ar–
N0 -(anthracene-10-ylmethylene)-2-benzamido-4-methylpe- H), 7.82–7.77 (m, 4H, Ar–H), 7.74 (d, 2H, J = 6.3 Hz,
ntanehydrazide 6g Ar–H), 7.61–7.47(m, 5H, Ar–H), 7.42 (d, 1H,
Dark orange powder; Yield: 79%; m.p: J = 8.7 Hz, Ar–H), 4.55 (dd, 1H, J = 8.0,7.5 Hz, CH),
225–230 C; IR (cm−1): 3298 (NH), 1663 (C O), 1624 1.79–1.73 (m, 3H, CH/CH2), 0.92 (d, 3H, J = 6.3 Hz,
(C N), 1549 (C C); Elemental analysis: calcd. for CH3), 0.85 (d, 3H, J = 6.3 Hz, CH3); MS (GC, 70 eV):
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JOURNAL OF THE CHINESE
Hydrazones from Amino Acids CHEMICAL SOCIETY
J. Chin. Chem. Soc. 2017 © 2017 The Chemical Society Located in Taipei & Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim www.jccs.wiley-vch.de 7
Article Abid et al.
J = 6.3 Hz, Ar–H), 8.16 (d, 1H, J = 8.7 Hz, Ar–H), organism was considered as the MIC of the respective
8.00–7.93 (m, 2H, Ar–H), 7.67–7.48 (m, 8H, Ar–H), sample.
4.66 (q, 1H, J = 7.8 Hz, CH), 1.52 (d, 3H, J = 8.1 Hz, The cytotoxicity of the compounds was deter-
CH3): MS (GC, 70 eV): m/z (%): 204(14), 203(100), 201 mined by microwell cytotoxicity assay against the brine
(9), 176(8), 175(10), 150(6), 88(8), 87(7), 75(7), 63(4), shrimp (Artimia salina). The eggs powder of the
50(4); HRMS Pos (ESI) calcd. for C25H21N3O2 A. salina (0.5 g) was added to a 1-L separating funnel
[M + H]+ calcd. 396.17065, found 396.17106 and filled with 500 mL of artificial seawater. The suspension
[M + Na]+ calcd. 418.1526, found 418.15308; exact ion was aerated by bubbling air into the funnel and kept
mass 395.16338. for 24–48 h at room temperature. Later, the aeration
was stopped and the suspension was kept undisturbed
DETERMINATION OF ANTIMICROBIAL for 1 h to let the remaining eggs settle down. In order
ACTIVITY, MINIMUM INHIBITORY to use only the active larvae, one side of the separating
CONCENTRATIONS (MICS), AND funnel was covered with an aluminum foil and the other
CYTOTOXICITY side illuminated with a lamp to gather the phototropic
The antimicrobial activity of the synthesized com- larvae at the illuminated side. Then with the help of a
pounds was determined by the agar diffusion method micropipette, 30–40 shrimp larvae were transferred to a
against the following test strains; S. aureus, MRSA, deep-well microtiter plate, with each well filled with
E. coli, Klebsiella sp., Acintobacter sp., and C. albicans. 0.2 mL of sea water. Initially, the dead larvae were
Luria–Bertani (LB) agar plates were prepared by pour- counted (value N), then 20 μg of the compounds in
ing 16 mL of molten agar in to Petri plates. After solid- DMSO was added to the designated wells, and the plate
ification, the plates were overlayed with 4 mL of seed was kept at room temperature in the dark. After 24 h,
agar having a standardized inoculum of the test strains. the number A of the dead larvae in each well was
The plates were left for 15 min at room temperature, counted again under the microscope. The surviving lar-
and the agar wells were made with the help of a sterile vae were killed by the addition of 0.5 mL methanol to
cork borer. Then 50 μL of the samples was loaded in each well, and subsequently the total number G of the
each well, which were labeled accordingly. The plates larvae was determined. Each test row was accompanied
were left at room temperature for 2 h and incubated at by a blind sample containing pure DMSO instead of
37 C for 18–24 h. The plates were observed for clear the test compounds. As a positive control with 100%
zones around the wells, which indicated growth inhibi- mortality, namely actinomycin D (20 μg/mL), was used.
tion of the test organism by the compounds. The zones The percentage mortality M was calculated using the
of inhibition were measured in millimeters. following formula:
The minimum inhibitory concentrations (MICs) of
M = [(A – B – N)/(G – N)] × 100
the compounds were determined by the broth dilution
where
method against the two representative Gram-positive
M = percent of the dead larvae after 24 h.
and Gram-negative test organisms including S. aureus
A = number of the dead larvae after 24 h.
and E. coli, respectively. The pure cultures of the test
B = average number of the dead larvae in the
organisms were grown in the LB broth and the inocu-
blind samples after 24 h.
lum was standardized by comparing with 0.5 McFar-
N = number of the dead larvae before starting of
land standard. Twofold dilutions of each of the
the test.
compounds were prepared in sterile LB broth in the fol-
G = total number of larvae.
lowing range: 1024, 512, 256, 128, 64, 32, 16, 8, 4,
2, and 1 μg/mL. Each test tube contained 5 mL of LB
broth, which was inoculated with 50 μL of the cell sus-
pension. The tubes were incubated at 37 C for 18–24 h ACKNOWLEDGMENTS
and were observed for the growth of the test organism, The authors acknowledge the support provided by
which was indicated by turbidity. The lowest dilution HEC, Pakistan, under its ASIP program for the analy-
that did not exhibit any turbidity or growth of the sis of the products synthesized.
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JOURNAL OF THE CHINESE
Hydrazones from Amino Acids CHEMICAL SOCIETY
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