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DOI: 10.1111/are.14906
ORIGINAL ARTICLE
1
Laboratorio de Biología Molecular, División
Multidisciplinaria de Jalpa de Méndez, Abstract
Universidad Juárez Autónoma de Tabasco, The tropical gar (Atractosteus tropicus) is one of the most important commercial spe-
Jalpa de Méndez, Tabasco, México
2 cies in south-eastern Mexico, being studied in reproductive, physiological, nutrition
Laboratorio de Investigación en
Biotecnología Acuícola (LIBA), Tecnológico and cultivation aspects; however, the aspects related to the endocrine system are
Nacional de México Campus Boca del Río
unknown, mainly the expression of hormones during their larval development. In this
(ITBoca), Boca del Río, Veracruz, Mexico
3
Laboratorio de Acuicultura Tropical,
study, we investigated the expression of the insulin gene (INS) and growth hormone
División Académica de Ciencias Biológicas, (GH), during the embryonic period (egg), eleutheroembryon (3 DAH) up to 25 DAH
Universidad Juárez Autónoma de Tabasco,
Villahermosa, Tabasco, México
using RTq-PCR, normalized with the elongation factor gene EF1-α. The INS phylo-
4
CIBNOR, Instituto Politécnico Nacional genetic inference showed an amino acid identity of 97%, while GH 99% against the
195, La Paz, B.C.S., México sequence of Lepisosteus oculatus, indicating that these species are related and come
Correspondence from a common ancestor. The gene expression of the INS showed four peaks at 3, 7,
Carlos Alfonso Frías-Quintana, Laboratorio 11 and 19 DAH, corresponding to changes in diet (Artemia nauplii) and artificial foods.
de Investigación en Biotecnología Acuícola
(LIBA), Tecnológico Nacional de México GH expression was detected from the egg, increasing from day 15 to 25 DDE, con-
Campus Boca del Río (ITBoca). Carretera cluding that A. tropicus larvae showed early and high expressions of these hormones,
Veracruz-Córdoba Km.12, 94290. Boca del
Río, Veracruz, Mexico. indicating a direct relationship with changes in metabolism of the species, increasing
Emails: alvarez_alfonso@hotmail.com; its function according to the nutrients present in the food and the increase in growth
cafq22@hotmail.com
during the ontogeny of A. tropicus.
KEYWORDS
1 | I NTRO D U C TI O N functioning and their importance during their larval development
are unknown.
The tropical gar (Atractosteus tropicus) is a species that lives in Considering the above, scientific and technological advances
continental water bodies and with adaptability to little oxygen- show molecular biology as an area of research that has not been
ation in its environment, a characteristic that makes this species fully explored, mainly in studies for this species and have fo-
unique for cultivation in captivity, which is why it has been widely cused mainly on cyprinids and mostly on marine species such as
studied in aspects on the biology, physiology, reproduction, nu- Lutjanus guttatus (Galaviz et al., 2011), Lates calcarifer (Srichanun
trition and genetics of A. tropicus in the last 30 years, allowing et al., 2013), Totoaba macdonaldi (Galaviz et al., 2015), Salmo salar
to know aspects of its cultivation (Aguilera et al., 2002; Álvarez- (Sahlmann et al., 2015), Sparus aurata (Mata-Sotres et al., 2016),
González et al., 2007; Arias-Rodríguez et al., 2009; Frías-Quintana Centropomus poeyi (Asencio-Alcudia et al., 2018), and Seriola rivo-
et al., 2015, 2016; Guerrero-Zarate et al., 2013. However, the liana (Teles et al., 2019).
aspects related to the expression of insulin-like hormones and In freshwater species, studies have been carried out to evaluate
growth hormones that contribute to the knowledge of their the effect of diets on the expression of the gene for growth hormone
Aquaculture Research. 2020;00:1–10. wileyonlinelibrary.com/journal/are© 2020 John Wiley & Sons Ltd 1 |
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2 ZAMORA-SOLÍS et al.
(GH) and insulin on growth and sexual differentiation in Anguilla an- the expression of GH in the early stages of development suggests
guilla (Degani & Abraham, 1992; Degani, 2016; Degani et al., 2003), that it plays an important role in the growth and survival of larvae,
GH secretion in Cyprinus carpio (Degani et al., 1999), GH expres- which has been proven by the stimulatory effects of growth when
sion and insulin-like growth factor-1 in Trichogaster trichopterus using exogenous GH, and the transfer and envelope expression
and Acipenser gueldenstaedtii (Degani, 2014; Degani et al., 2017; of the GH gene demonstrated in teleost larvae (Wen et al., 2015).
Goldberg et al., 2004; Yom Din et al., 2008). Although GH has been detected in many groups, it may be function-
For Atractosteus tropicus, dietary studies and their effect on im- ally limited within a large number of taxa; the comparison of GH se-
mune system genes and genes related to lipid metabolism have quences has been informative in a variety of phylogenetic analyses.
been performed (Jiménez-Martínez et al., 2019; Nieves-Rodríguez Given the phylogenetic position of the catanes (chondrosteal) like
et al., 2018), which shows fluctuations in the expression of various the long-nosed gar Lepisosteus osseus could relate the changes in
genes related to morphophysiological changes, in particular for en- the structure of GH and the evolutionary trends in the Neopterygii
zymes and hormones associated with digestive physiology. Due to the Group and among the Actinopterygii. (Rubin, Youson, Marra & Dores,
above, there are many research possibilities that have not yet been ex- 1996), should be useful for the interpretation of the evolutionary
plored, mainly for knowledge of the physiology and gene expression tendencies in the structure of the GH in the Neopterygii group and
of species of aquaculture interest, of which there is no study focused among the Actinopterígios. In this context, the objective of this re-
on insulin-like hormones and growth reported for larvae of A. tropicus. search is to determine the expression insulin and GH through the
In this way, insulin (INS) and insulin-like growth factors (IGFs) are larval development of the tropical gar (Atractosteus tropicus) and the
evolutionarily related peptides that are derived from a common an- evolutionary tendencies of these genes in relation to other species.
cestral gene (Jin Chan & Steiner, 2000). A single INS gene has been
described for almost all existing groups of vertebrates studied to
date (Irwin, 2004). However, recent studies reveal that certain spe- 2 | M ATE R I A L S A N D M E TH O DS
cies of fish (for example, salmon, fugu and zebrafish) have multiple
copies of the INS gene, possibly as a result of an event of gene du- 2.1 | Sample processing
plication associated with the appearance of teleosts (Conlon, 2001;
Irwin, 2004; Kavsan et al., 1993). INS has been shown to be a strong For this study, a total of 2000 embryos of A. tropicus were
growth-promoting agent in fish, only slightly less effective than the obtained, based on the recommendations of Frías-Quintana
action of insulin growth factor IGF-I (Planas et al., 2000). et al., (2016), from an induced spawning of broodstock (1 female
On the other hand, growth hormone (GH) is a well-conserved 3.5 kg of average weight and 3 males 1.5 kg of average weight)
hormone and is expressed mainly in the anterior pituitary gland of using the hormone LHRHa (35 μg/kg of fish−1) which were kept
all vertebrates and is responsible for exponential growth. Although in circular tanks of 2,000 L (0.6 m high by 2 m in diameter) ob-
the growth-promoting effect of GH is well documented, the growth tained from the Laboratorio de Acuicultura Tropical in the
of fish is multifactorial and GH will be able to act at different lev- División Academica de Ciencias Biologicas of the Universidad
els (Mommsen, 2001). Growth hormone (GH) is the main regulator Juárez Autónoma de Tabasco (DACBIOL-UJAT). Once spawning
of somatic growth and metabolism of fish, as in other vertebrates (16 hr post induction), the brood stocks were removed keep-
(Björnsson, 1997). Until recently, it was believed that GH had no role ing the eggs until hatching (day 3 post fertilization, 0 days after
in the growth of the embryo, but transcripts of GH have been de- hatching, DDE), at which time the eleuteroembryos were placed
tected in rainbow trout embryos prior to organogenesis of the pitu- in three 70-L circular plastic tanks coupled to a recirculation sys-
itary and even in mature oocytes (Yang et al., 2019). tem consisting of a 1,500 L reservoir that functions as a solidifier
In tetrapod vertebrates, embryonic and foetal growth had been and biological filter, as well as a ¾ HP centrifugal pump (Jacuzzi,
considered to be independent of pituitary GH, although it is required JWPA5D-230A, Delavan WI, USA), a silica sand filter (STA-RITE,
for post-natal growth and development. However, recent studies S166T, Delavan WI, USA) and two titanium thermostats (PSA,
suggest that extrapituitary GH play an important role in early em- R9CE371, Delavan WI, USA). The water quality of the system
bryonic growth and differentiation (Sanders & Harvey, 2004), and was monitored daily during the 31 days of larviculture record-
these data led to give another dimension of the action of GH in ver- ing the temperature (29°C), the dissolved oxygen (6.43 mg/L)
tebrates in early development. Although the expression of GH has and the pH (6.7) by means of an oximeter (YSI 85, Ohio, USA)
been described extensively in euteleosteos, until now little is known and a potentiometer (HANNA HI 991001, Romania, Europe)
of GH in the physiology of primitive fish (Fukamachi & Meyer, 2007). respectively. The organisms remained in this system until they
However, little is known about the regulation of growth in tele- absorbed the yolk (2 DDE), initiating the feeding phase, which
osts during early development, although the implication of the endo- was carried out five times a day (8:00, 11:00, 13:00, 15:00 and
crine system is obvious. The presence of GH in the embryo and the 18:00 hr) starting with Artemia nauplii (AN, 2–5 nauplii/ ml) from
first stages of larvae has been confirmed in fish such as Epinephelus the moment of opening of the mouth to 17 DDE, and later with
colloids (Li et al., 2005, 2006), Anguilla japonica (Ozaki et al., 2006) artificial feed for trout (TD, Silver Cup, 45% protein and 16% li-
and several species of teleost fish (Fukamachi & Meyer, 2007). Also, pids) until 31 DDE, for which the food was broken and sifted
ZAMORA-SOLÍS et al. |
3
TA B L E 1 Oligonucleotides used for sequencing and real-time polymerase chain reaction in Atractosteus tropicus
Primer names Forward (5´- 3´) Reverse (5´- 3´) Size pb Step
(250–500, 500–750 and >750μm) in relation to the size of the oculatus and Elongation factor 1-alpha (EF1) for Atractosteus tropi-
mouth of the larvae. Sampling of larvae began from the egg, cus (KT351350.1), whose sequence of genes were obtained from the
eleuteroembryos (1–3 DDE), up to 4 DDE, and then, the sampling GenBank database. The oligonucleotides were designed with the fol-
was carried out every two days (days 7, 9, 11, 15, 19 and 25 DDE), lowing characteristics: from 20 to 22 nucleotides long, an alignment
collecting 5 larvae per day in triplicate, up to a total of 270 larvae temperature of 50 to 60°C, CG (guanine-cytosine) content of 50% and,
that were stored in 1.5-ul Eppendorf tubes with RNAlater® solu- finally, secondary structure formation was evaluated using the Oligo
tion (Ambion USA) and kept in ultra-freezing at −80°C (Thermo Calculator version 3.27 open-access software method Kibbe, (2007),
Scientific, Ohio, USA) until further processing. (http://biotools.nubic.northwestern.edu/OligoCalc.html) (Table 1).
To evaluate the oligonucleotides designed for A. tropicus, we
run in a Thermal Cycler Proflex PCR System (Thermo Scientific,
2.2 | RNA extraction and cDNA synthesis by RT- Ohio USA) using the Platinum Taq DNA Polymerase (Invitrogen,
PCR in larvae of A. tropicus Carlsbad, CA). Amplification was conducted under the following
conditions: 10 min at 95°C, followed by 35 cycles at 95°C for 30 s,
The total extraction of RNA was carried out using a homogenate of 58°C for 30 s and 72°C for 30 s with a 5-min extension at 72°C,
larvae (0–25 days after hatching). The process was carried out with a according to the indications and specifications of the supplier (Pohl
commercial extraction kit of RNA PurelinkTM RNA Kit (Promega WI & Shih, 2004). The amplification products were separated on a 2%
US), according to the supplier's specifications, based on the princi- agarose gel stained with ethidium bromide (Grey & Brendel, 1992).
ple of the RNA extraction technique Otto (1998); finally, the sample The bands observed under UV light (ENDURO © GSD Labnet
was resuspended in water free of RNAases. The concentration of International (Nueva York, E.U.) were cut from the gel and puri-
RNA extracted and purified was checked with the Nanodrop one © fied using the PureLink® PCR Purification Kit (Invitrogen) according
(Thermo Scientific, Ohio USA) using 1 ul per sample. to the indications and specifications of the supplier. The purified
The cDNA synthesis was performed using the GoScript™ bands were sent to GENEWIZ Inc. (MD, USA) for direct sequencing.
Reverse Transcription System kit (Promega, WI USA) according to
the indications established by the manufacturer, based on tech-
nique Myers and Gelfand, (1991), using 1 μg of total RNA and using 2.4 | Sequence analysis
the Thermal Cycler Proflex PCR System (Thermo Scientific, Ohio
USA). Once the amplification of the obtained products was ob- The sequence of the genes were sent by the company by mail in
tained, they were run on a 2% agarose gel (Grey & Brendel, 1992) the FASTA file, which were analysed with the Chroma software
to determine the presence of bands with their respective molecular (http://www.techne lysium.com.au/) (Goodstadt & Ponting, 2001)
weight, using a 50 bp molecular weight marker (Invitrogen Tech-Line to evaluate the identity of each one. The nucleotide sequences
NY, USA), subsequently. Once the gene was located, the products contained the amino acid sequence to be translation to the pro-
TM
obtained from the PCR were purified with the PureLink Quick tein sequence through the ExPASy translation software (Artimo
PCR Purification Kit® kit (Life technology Germany) according to et al., 2012) and were compared with the BLASTn and BLASTp
the supplier's specifications to send them later to be sequenced. tools compared with DNA sequences present in the GenBank da-
tabase network service at NCBI (https://blast.ncbi.nlm.nih.gov/).
The phylogenetic tree was generated using Neighbour-Joining
2.3 | Oligonucleotide design (NJ) methods based on the AA sequence using MEGA X software
(Kumar et al., 2018), where the principle of the software is to align
The oligonucleotide design was made based on the Hung and the introduced sequence of the species and the amino acid se-
Weng, (2016), technique, using the software primer 3 Plus (http:// quence is aligned with other sequences of registered organisms
prime
r3plus.com/web_3.0.0/prime
r3web_input.htm) of a specific to build evolutionary trees of the species, as well as to estimate
region of the growth hormone (GH) sequence (XM_006638287.2); genetic distances between organisms and infer in ancestral se-
Insulin (XM_015351933) obtained from the specie Lepisosteus quences with an ancestor in common.
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4 ZAMORA-SOLÍS et al.
2.5 | RT-qPCR analysis
2.6 | Statistical analysis
3.2 | Analysis of phylogenetic distance
The relative expression of GH, insulin and EF1- α among the differ- between sequences
ent stages days after hatching (DAH) of larvae were analysed using
the Kruskal–Wallis test. A posteriori Nemenyi tests were performed The phylogenetic inference of INS showed the highest percent-
to determine significant differences among the activities based on age of identity (100%) against the sequence of insulin-like isoform
age (significance value of p < .05). All statistical analyses were per- X3 Lepisosteus oculatus (XM_015204784.1), member of the order
formed using STATISTICATM v. 7.5 software (StatSoft, Tulsa, OK). Lepisosteiformes and 43% percentage of identity with insulin
Crocodylus porosus (XP 019406793.1); this being an indication of
that these species are related and come from a common ancestor,
3 | R E S U LT S which indicates that the amino acid sequence belongs to the hor-
mone insulin, where an alignment is shown where the zones with
3.1 | PCR amplification and sequencing amino acid greater homology or conserved between the species are shown
analysis of the INS, GH and EF1 genes (Figure 3a).
The growth hormone (GH) gene showed the highest per-
Amplified fragments of the genes for insulin (INS), growth hormone centage of amino acid identity (27%) against the reported
(GH) and elongation factor EF1-α (KT351350.1) were obtained, GH sequence in Crocodylus novaeguineae (AAB34999.1) and
using primers by RT-PCR which were visualized in 2% agarose gel Oreocchromis niloticus (AAA49626.1), while with Lepisosteus
ZAMORA-SOLÍS et al. |
5
F I G U R E 2 Partial sequences of nucleotides and amino acid (AA) AA)-encoding genes (a) INS (insulin) (b) GH (Growth Hormone), from A.
tropicus taken from GenBank for the design of specific oligonucleotides for qPCR
osseus (AAB37388.1) and Acipenser sinensis (ACC86123.1) with analysis of fusion peaks, using the software Rotor Gene Q-Qiagen©
11% (Figure 3b). (Hilden, Germany). After this analysis, the relative quantification of
insulin and growth hormone (GH) was determined using EF1 as a
reference gene and the following was observed: INS expression was
3.3 | The expression of insulin and GH genes low during the first days presenting a peak on day 7 DAH and sub-
during the ontogeny in A. tropicus sequently presented variations throughout the development of the
larva (Figure 4a). The expression of GH is detected from the first
Subsequently, the specificity of the oligonucleotides was confirmed days of culture of the larvae, presenting a peak of expression at 11
through the RT-qPCR, due to the absence of secondary structures, DAH, to be increased from day 15 DAH to day 25 DAH consecu-
the primer dimer or non-specific amplification fragments through the tively (Figure 4b).
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6 ZAMORA-SOLÍS et al.
F I G U R E 3 Phylogenetic tree based on the protein sequences of genes (a) Insulin (INS) and (b) Growth hormone (GH) from A. tropicus
and other vertebrate species using the neighbour-joining (NJ) method. Values at branch-points represent percentage frequencies for tree
topology after 1,000 interations
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