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Water Absorption at the Roots
o by osmosis of water from soil to root hairs
o Osmotic force is developed by the osmotic pressure of the vacuolar sap in root hairs
and cortical parenchyma
o Water is absorbed when the osmotic force of the root hairs of plant roots exceeds the
retention of the water by the soil.
o Water entrance into the cell does not depend on the osmotic pressure value, but
rather on the difference between this value (P) and that of turgidity (T). This pressure
difference, called the suction force (S), is the true active force, participating in water
absorption (S = P T).
o Once inside the root, water moves in 2 pathways: apoplastic and symplastic
pathways.
Apoplastic pathway is determined by the adhesive properties of the cell walls.
Symplastic pathways occurs via the lipid bilayer membrane and via
plasmodesmata.
Water Flux in Plants & ψw
o At incipient plasmolysis (protoplast volume = 1.0)
o In hypotonic solution: ( e.g. pure H 2 O) : ψ = 0;
o In hypertonic solution: ( ψs(H20) < ψs(cell))
Pathways of water in cells
o Via bilipid layer
o Via aquaporins (gated)
Regulate osmotic flow (osmoregulation)
Anatomy of Water Conduction
o Tracheid and vessel element structure provides for the efficient movement of water
through the xylem.
o The tracheid have bordered pit pairs with a central torus that provides a way of
sealing the tracheid if necessary.
o Vessel elements are made up of vessel members that have a perforation plate at
each end.
o The perforation plate may have a scalariform or reticulate structure
Water potential at various levels of tree
TRANSPIRATION COHESION TENSION THEORY
Explanation:
o 1) Evaporation of water by along leaf mesophyll spaces sets up negative pressure
that pulls columns of along xylem from roots to treetops;
o 2) Lower columns of water molecules are pulled up by cohesion & adhesion
(1) Evaporation of water from cell walls into air spaces of a leaf and from the leaf into the
atmosphere (transpiration) sets up a gradient of water potential not only between living cells but
also along cell walls.
(2) the high surface tension of water means that the walls do not dry out but remain permanently
wetted so that due to cohesion (mutual attraction between water molecules) and adhesion
(attraction of water to solid phase such as cell wall), water flows ultimately from root xylem into
the leaf veins (vascular bundle) to replace that which is lost.
(3) water removal from the leaf xylem creates negative pressure a pulling force that drives the
transpiration stream. This tension is relayed to root cells (and soil) resulting to water uptake.
o 3 Stages
Carbon Fixation
Reduction of PGA to G3P
Regeneration (RuBP)
o Occurs in stroma
o Main events are the assimilation and reduction of gaseous CO2 into carbohydrates
and sugars
o Carbon Fixation- CO2 is combined with a CO2 capturing called RuBP (iburus
biphosphate) by the enzyme at rubisco
o Reduction- resulting molecule of carbon fixation which is phosphoglyceric
acid/phosphoglycerate (PGA) and is then reduced by NADP and phosphorylated by
ATP to reduce it into 3 carbon sugars called glyceraldehyde triphosphate (G3P)
G3P are then used to combine into other molecules of sugar like glucose
o Regeneration- when some G3P are used to regenerate RuBP so that the entire
reactions of Calvin cycle can be repeated again for other CO2
Variations/adaptations of C3 cycle
o C4 cycle (sunny and hot environments)- spatial separations of light and dark
reactions
Carbon fixation (mesophyll cells) and CO2 reduction (bundle-sheath cells)
Carbon fixation: PEP and RuBP, and enzymes (PEP carboxylase and
rubisco) (e.g., corn, sugarcane, grass)
Cellular Respiration
Cellular respiration and fermentation
o Major metabolic strategies that extract energy from food fuel molecules and store
this energy in ATP
o Extraction of energy involves elaborate sets of chemical reactions that is shared by
most organisms
Differentiated living organisms into 3 main groups based on oxygen requirements
o Strict aerobes- organisms that can only carry out metabolism in the presence of
oxygen
o Obligate anaerobes- can only metabolize in the absence of oxygen
o Facultative anaerobes- can metabolize with or without oxygen
Cellular respiration- main ATP-synthesizing catabolic metabolism of most aerobic
organisms but can also rely on fermentation at a limited period of time
o Highly compartmentalized
o The different sets of chemical reactions are catalyzed by different sets of enzymes at
different locations in and outside the mitochondrion
Fermentation- the main metabolism of facultative anaerobes at conditions without oxygen
but can also carry out cellular respiration when oxygen is present
o Also carried out by strict anaerobes
Characteristic reactions in Cellular Respiration
o Oxidation- strips an electron away from an atom in a molecule
o Reduction- adds an electron to a molecules
o Substrate-level phosphorylation- adds a phosphate directly to a molecule
(substrate)
o Oxidative phosphorylation- phosphorylation of ADP out of proton concentration
gradient established by the oxidation of high-energy molecules
Main Metabolic Pathways
o Glycolysis (Cytoplasm)- Glycolysis operates only in CHO, converting glucose to
pyruvates
Can occur with or without O2, while Krebs cycle and Oxidative
phosphorylation cannot
o Krebs Cycle (Mitochondrial Matrix)
o Oxidative Phosphorylation (Inner mitochondrial membrane)
The different sets of chemical reactions are catalyzed by different sets of
enzymes at different locations in and outside the mitochondrion
Glycolysis
o Involves 10 enzymatic reactions that partially catabolizes CHO
o First steps of reactions activate glucose with 2 substrate-level phosphorylation into
fructose-1,6-biphosphate
o Then glucose is split into 2 molecules of G-3-P that each proceeds in 2 identical sets
of oxidative reactions and dephosphorylations that ends up as 2 pyruvates
o From here on metabolic pathways for 1 glucose and byproducts are multiplied by 2
o by products: 2 ATP, 2 NADH+
o proceeds into 2 pathways depending on O2 availability
Aerobic respiration- O2 is abundant
Anaerobic (fermentation)- O2 is lacking
Lactic acid fermentation- reduction of pyruvates by NADH+ into
lactic acid
Alcohol fermentation- reduction of pyruvates by NADH+ into
alcohol
o Function: to oxidize NADH+ and make NAD available
again to continue glycolysis
Whole point of fermentation is to unload electrons from the
electron escorts of NAD and make them available again as
electron escorts for other glucose molecules that are being broken
down
Krebs Cycle (Tricarboxylic acid cycle, citric acid cycle)
o Venue: Mitochondrial matrix
o Primary molecule: Acetyl CoA
Prior to its entry into the Krebs cycle, pyruvates from glycolysis is first
decarboxylated and oxidized by NAD into Acetates which binds with
coenzyme A to form acetyl-coenzyme A
CoA then shuttles acetate of glucose into the Kreb’s cycle
o Acceptor molecule: Oxaloacetate
The acetate of glucose then binds with the acceptor molecule:
Oxaloacetate forming Citric acid.
o 1st product: Citrate
o Then citric acid undergoes oxidations, dephosphorylations and decarboxylation that
yield 3 NADH+, 1 FADH+, 1 ATP and 2 CO2 before it is transformed back to
Oxaloacetate, thus proceeding as a cycle
o End-product: Oxaloacetate
o Byproducts: 3 NADH+, 1 FADH+, 1 ATP, 2 CO2
o Can utilize metabolites from breakdown of other CHO, proteins & fats to form ATP,
CO2 and H+.
o Nothing is left of glucose by the end of Krebs cycle
Electron transport and oxidative phosphorylation
o Involves electron carriers embedded in inner mitochondrial membrane called
cytochromes.
o Last step of cell respiration where electron carriers: NADH+ & FADH+ from glycolysis
& Krebs cycle unload electrons and H+ at the cytochromes of the electron transport
chain
o As electrons pass along the cytochromes, H+ are pumped across the inner
mitochondrial membrane, establishing H+ gradients (chemiosmosis)
o H+ to diffuse back to the inner mitochondrial compartment or matrix along the ATP-
synthase-H+ channels activating the ATP synthase enzyme to phosphorylate ADP
molecules -→ ATP
o This is known as oxidative phosphorylation.
yields the greatest amount of ATP
o Oxygen (O2) acts as final electron acceptor.
o O2 binds with H+ to form metabolic H2O
It’s called metabolic water because the formation of water involves
several metabolic reactions.
Inputs Outputs
1 glucose 2 pyruvates
Glycolysis 2 ATP
2 NADH
2 pyruvates 2 Acetyl CoA
Pyruvate decarboxylation 2 CO2
2 NADH
2 Acetyl CoA 4 CO2
Citric acid cycle 2 ATP
6 NADH
2 FADH2
Oxidative phosphorylation 10 NADH 30-34 ATP
2 FADH2
Total 30-38 ATP
o Aside from synthesizing substantial amounts of ATP molecules, one other major
function of cellular respiration is that it plays a central role in the biosynthesis of
important plant molecules.
o In the figure, glycolysis and citric acid cycle yield building blocks for the synthesis of
many types of molecules.
All 20 amino acids, for example, are synthesized from the intermediate
products of cellular respiration.
Alternative Respiratory Pathways in Plants
Pentose Phosphate Pathway
o Begins with glucose-6-phosphate from glycolysis
instead of proceeding to form pyruvates, glucose-6-phosphate is
converted to ribulose-5- phosphate that yields either 4-C erythrose or 5-C
ribose sugars. The 4-C erythrose are important precursors to the
synthesis of lignin, anthocyanin and amino acids. While the 5-C ribose
are important precursors to nucleotides or nucleic acids. Besides theses,
pentose phosphate pathways also reduce NADP which are important
reductants of nitrates to amino acids.
o Functions:
gives off carbon dioxide
Reduce NADP to NADPH
Transform glucose to 4-C erythrose & 5-C ribose
4-C erythrose are precursors to lignin, anthocyanin & amino acids
5-C sugars yield precursors for nucleic acid synthesis
Thermogenic Respiration
o Electron transport chain contain alternative oxidases (AOX)
These mitochondrial oxidases allow electrons to flow along the electron
transport chain without synthesizing ATP
Oxidizes NADH+
AOX do not generate ATP; no chemiosmosis
o Thermogenic respiration
o Also known as cyanide-resistant respiration
o Energy in electron carriers, NADH, is converted entirely to heat
o Thermogenic respiration is useful to certain plants covered in snow during winter,
such as the skunk cabbage.
Generating heat by thermogenic respiration allows these plants to melt
snow and expose their flowers to pollinators even during winter
been formerly called cyanide-resistant respiration because such poisons
as cyanide do not affect plant tissues having these electron pathways
Photorespiration
o Photorespiration is a process closely associated photosynthesis
Mentioned by Mauseth as an alternative respiratory pathway because it
involves oxygen-binding of RuBP
involves enzymes in the mitochondrion that are part of cellular respiration
o C2 glycolate cycle, also known as the photosynthetic carbon oxidation (PCO) cycle
o An alternative respiratory pathway
o Glycolate is shuttled between 3 organelles:
Chloroplast
Peroxisome
Mitochondrion
o Glycine →CO + H2O
o No energy conserved in ATP/NAD
o End-result similar to thermogenic respiration
Summary
o ATP production in Cellular respiration involves oxidation-reduction, substrate-level
and oxidative phosphorylation to extract energy from substrates like glucose
o Metabolic pathways of cellular respiration can directly yield ATP but its greatest ATP
yield results from electrons & protons from oxidation-reductions of between
substrates and electron carriers NAD and FAD
o ATP yield varies due to lack of direct coupling between redox reactions and oxidative
phosphorylation as well as due to variety of energy extracted at different stages of
cellular respiration.
o Apart from carbohydrates, other macromolecules such as protein and lipids can also
yield intermediate products that can join various points of cell repiration to yield
energetic electrons and protons for ATP synthesis.
o Cellular respiration produces intermediate products that serve as building blocks or
precursors for the synthesis of other plant molecules such as nucleic acids and
chlorophyll pigments
o Cellular respiration is also closely associated with other metabolic pathways, called
alternative respiratory pathways