Professional Documents
Culture Documents
Stunmary-The effect of pH on surface growth and activity of Nitrobacter was studied in batch and
continuous flow systems and on glass coverslips and anion-exchange resin beads. In batch culture with
an initial nitrite concentration of 50 pg NO?-N ml-’ freely-suspended cells had a pH optimum of 7.5 and
a pH minimum of 6, which was reduced to 5.5 at lower initial nitrite concentrations. Free cells grew in
continuous culture at pH 53 and nitrite oxidation rate per cell decreased with decreasing pH. Attachment
of Nitrobacter to anion-exchange resin beads increased with pH over the range 5.5-8.0. No such increase
was observed on glass coverslips but attached cells grew approximately 20% faster than free cells.
Attachment to glass did not affect the pH optimum or minimum in batch culture. In continuous flow
culture, the nitrite-oxidizing activity of attached ceils was less than that of free cells and responses to
transient changes in pH were reduced. Established attached cells were covered in extracellular slime
material and significant nitrite oxidation occurred at pH 4.5. Surface growth was the major factor in the
response of Nitrobacter to pH and allows for the possibility of autotrophic nitrification in acid soils.
lNTRODUCTlON
organisms, the nature of the surface and other factors
(Fletcher, 1985). Surface attachment may stimulate
The conversion of ammonium to nitrate, via nitrite, or inhibit growth and activity, but there are few
by autotrophic nitrifying bacteria is generally be- reports on the effects of surfaces on growth at
lieved to occur in the soil at neutral to alkaline pH different pH and on growth of nitrite-oxidizing bac-
values, while nitrilication in acid soils is thought to teria and pH may also influence the degree of revers-
result from the activity of heterotrophic organisms, ible attachment of microorganisms by altering the cell
oxidizing either ammonium or nitrite through sec- surface charge. In turn, the pH-activity response of
ondary metabolic processes (Focht and Verstraete, attached cells has been reported to differ from that of
1977). This belief arises mainly from observations of free cells, as demonstrated with Escherichia coli, and
growth of nitrifying bacteria in liquid batch culture, Micrococcus luteus attached to anion-exchange resin
where reported optima for Nitrosomonas and Nitro- (Hattori and Furusaka, 1960; Hattori and Hattori,
butter lie in the ranges 7.5-9.0 and 7.0-9.3 re- 1963) and Nitrobacter agilis attached to cation-
spectively (Painter, 1986). Nitrite oxidation is re- exchange resins and soil particles (McLaren and
duced at alkaline pH through competitive inhibition Skujins, 1963). The effect of pH on microbial growth
between NO; and OH-, while inhibition at low pH and activity in homogeneous liquid culture may
is due to formation of free nitrous acid. therefore be very different to that in the soil.
There are three major differences of particular It is impossible to study these factors in soil and we
relevance between the soil, other natural environ- have attempted to isolate them using model labora-
ments and the liquid batch culture systems used for tory systems and a pure culture of Nitrobacter.
determination of pH profiles. Firstly. concentrations Growth at low nitrite concentrations was studied
of nitrite in the soil are usually less than 1 pg in batch and continuous culture and the latter was
NOT-N ml-’ and are much lower than those used in also used to study cells growing at sub-optimal
laboratory culture media, usually SO-200 c(g NO;-N growth rates. Attached growth was studied on glass
ml-‘. Inhibition by nitrous acid at low pH may coverslips and on anion-exchange resins, providing
therefore be reduced in the soil. Secondly, the physio- surfaces of opposite charge and of defined chemical
logical state of the organisms may be different as, in composition. Anion-exchange resins provide ideal
the soil, cells will exist in a variety of conditions surfaces for adsorption and growth of Nitrobacter
ranging from feast and famine type situations to (Keen and Prosser, 1987) and have been used here to
prolonged growth at sub-optimal rates, with a con- study growth in an air-lift column fermenter in which
tinuous supply of substrate at growth-limiting con- resin beads were circulated such that the liquid phase
centrations. Thirdly, microbial cells in the soil will was homogeneous with respect to substrate and
exist at a solid-liquid interface and there is strong product concentrations. This provides advantages
evidence that soil nitrification is associated with the over continuous flow fixed columns (Prosser and
surface of soil particles (Lees and Quastel, 1946). The Bazin, 1987) where the establishment of gradients in
effects of surface attachment on microbial growth biomass, substrate and product concentrations com-
and activity are many and appear to vary with the plicates analysis of data on activity of attached cells.
665
666 G. A. KEZN and J. 1. FROSER
6
7
5 4.0
3.5
40 3.0
2.5
2.0
30
15
I I I
Time (h)
Fig. I. Changes in nitrite concentration (O), Nifrobacrer cell concentration (0) and pH (0) in a
chemostat operated at a constant dilution rate of 0.016 h-l. Changes in pH were achieved by altering the
pH of the supplied growth medium at times indicated by arrows. Nitrite concentrations were determined
every l-l.5 h and data have been smoothed, to improve presentation, by plotting the means of groups
of 30 successive values.
cells taken from chemostat cultures growing at pH subsequent changes in pH were achieved by adjust-
5.5 (see below). Both inocula gave growth at pH 6 but ment of the pH of the medium contained in the
no nitrite was oxidized at pH 5.5. In order to test reservoir. The pH of the medium in the culture vessel
whether the inability of Nitrobacter to grow in batch did not, therefore, change in a step-wise fashion but
culture at pH 5.5 was related to the initial nitrite approached new values asymptotically.
concentration as proposed by Anthonisen et al. Steady-states in nitrate concentration were estab-
(1976), duplicate flasks containing growth medium at lished at each pH studied down to and including pH
pH 5.5 and nitrite concentrations in the range 5.5 and steady-state data are presented in Table 1,
S-50 pg NO;-N ml-‘, were inoculated with Nitro- .with coefficients of sequential variation. These
batter. Flasks were incubated in the normal manner coefficients were used to determine establishment of
and nitrite was completely oxidized at ail nitrite steady states and steady-state nitrite concentrations.
concentrations up to 40 pg NO;-N ml-’ but not at Nitrite concentrations for each steady state were
50 pg NOT-N ml. significantly different and multiple steady states were
therefore obtained at pH 8. Nitrite oxidation rate per
Continuous culture in the absence of surfaces cell decreased with pH but the occurrence of multiple
Nitrobacter was grown in homogeneous con- steady states prevents quantitative analysis of the
tinuous culture at a dilution rate of 0.016 h-l, equiv- relationship. All changes in pH result&d in under-
alent to a specific growth rate 33% of the maximum shoots before establishment of new steady-state
observed in batch culture and 22% of that reported nitrite concentrations, but total cell concentration
for this strain in continuous culture (Keen and Pros- varied little between steady states, even at pH 5.5.
ser, 1987). Growth was followed by changes in total The transient response of nitrite concentration to
cell concentration and nitrite concentration (Fig. I). pH may be explained with reference to the pH profile
A steady state was first established at pH 8, and for Nitrobacter in batch culture. During both in-
Table I. Changes in steady-state nitrite concentration, coefficient of sequential variation and nitrite
oxidation rate per ccl1 for Nifrobucrer growing in a chcmostal and in an air-lift column fermenter containing
anionsxchanne resin beads at several sleadv slates and DH values
Sleady-state Coefficient Nitrite
Dilution nitrite of oxidation rate
rate concentration sequential per cell. per h
PH (h-l) bgNO;-N ml-‘) variation (pg NO,-N cell-’ h-l)
Time Ih)
Fig. 4. Changes in nitrite ~n~nt~tion (CJ), free (tf) and attached (8) cell ~on~ntration and pH (@)
in an air-lift column fermenter inoculated with Nilrobafrer and containing anion-exchange resin beads.
Changes in pH were achieved by altering the pH of the supplied growth medium at times indicated by
arrows. Nitrite concentration is plotted as deskbed in Fig. 1. The dilution rate was 0.085 h-l until I200 h
after which washout occurred. The system was then operated in batch for 14 days followed by con!inuous
flow at a dilution rate of 0.042 h-‘.
quently established following a pH reduction to 4.5, colonization of resin beads in batch culture, which
with no further change in free or attached cell decreased with decreasing pH, but was not always
concentration and a steady-state nitrite concentration observed.
of 5.7 pg NOT-N ml-’ was obtained. Table I gives values for steady-state data for both
To determine whether attached cells had become air-lift column fermenter experiments including rates
adapted to or selected for growth at low pH, a sample of nitrite oxidation per cell. In both experiments,
of resin beads was removed from the column at most of the free cells would have originated from
1180 h and used to inoculate into flasks containing attached cells through desorption, detachment and
IOOml growth medium (50~gNO;- ml-‘) at pH shearing from surfaces and the ratio of attached-to-
values in the range 5-8. There was again no growth free cells was high. Nitrate oxidation rate per cell was
in batch culture below pH 6. therefore calculated by dividing the total nitrite oxi-
The response to low pH was further investigated in dixed (i.e. the product of dilution rate and steady-
a second experiment at a dilution rate of 0.016 h-i. state nitrate con~ntration) by the total number of
A steady state was initially established at pH 8 and cells. Attached cell concentration was estimated from
a subsequent reduction in pH to 5.5 resulted in an the final attached cell count made during each steady
undershoot in nitrite concentration which fell to state and attached cell activity was based on the
complete oxidation before a steady state of assumption that all attached cells were viable and
21.5 pg NOT-N ml-’ became established. Reduction oxidized nitrite. This assumption may not be valid
in pH was accompanied by a slight decrease in however, particularly for cells attached on the inside
attached cell concentration but free cell concentration of the biofilm or cells covered in slime material to
did not change significantly. which the diffusion of substrates and oxygen may be
Changes in pH were frequently followed by under- limited.
shoots in nitrite concentration before new steady Attached cell activity increased from 0.052 pg N
states became established, but these were sometimes cell-‘h-’ to 0.086pg N cell-‘h-i following the
obscured by complete oxidation of nitrite. In some reduction in pH from 8 to 6 in the first column
cases monotonic changes in nitrite concentration experiment. This contrasts with the effect of pH on
occurred but overshoots were never observed. As cell activity in homogen~~ continuous culture,
discussed above, undershoots may be due to where cell activity decreased with decreasing pH and
changes in maximum specific growth rate and other in the second air-lift column fermenter experiment,
factors as pH optima are approached and passed. where attached cell activity fell with the decrease in
Reduction in pH was, in one case, also associated pH from 8 to 5.5. The increase in attached cell
with a decrease in attached cell concentration and an activity in the first experiment may be related to the
increase in free ceil concentration, indicating desorp. release of attached cells following the change in pH
tion of attached cells. This may correspond with from 8 to 6. Attached cell concentration was high at
G. A. m and 3. I. PRoSa
sved
Fig. 5. Scanning electron micrograph of an anion-exchange resin bead colonized by Nifrobacfer remo
from the air-lift column fermenter described in Fig. 4 at 980 h and prepared by critical point drying: (a)
3lar
a sparsely colonized region, (b) a heavily colonized area showing polysaccharide slime material and p’
orientation of some cells. Scale bars represent 2pm.
pH and surface growth of Mrrobucrer 671
pH 8 and the surface coverage of 73% was estimated ticular the attraction and repulsion of charged
assuming growth as a monolayer. Therefore, the substrates has been shown to be important in
reduction in attached cell concentration may have colonization of anion- and cation-exchange resins
alleviated limitation due to diffusion of substrates, beads by Nitrosomonus and Nitrobucter (Underhill
enhancing the activity of the remaining attached and Prosser, 1987). Despite the relatively minor effect
population. However, attached cell concentration of pH on numbers of cells attached to glass surfaces
rose again following the increase in pH to 8 and cell compared to anion-exchange resins, those attached to
activity remained high. The effect of pH on activity glass exhibited a specific growth rate between 20 and
of attached cells appears to be complicated by other 25% greater than that of free cells. In common with
factors such as the extent of colonization and the free cells, however, attached cells were incapable of
history of the population, but in all cases was lower growth at pH values below 6 in batch culture. An
than the activity of free cells at the same pH. altered pH response of cells attached to various
Attached cell concentrations were in the range surfaces, compared to that of free cells, has been
0.13-1.5 x lo8 cells cmm2 which, assuming growth as reported for several bacteria. Hattori and Furusaka
a monolayer, would provide a 6575% coverage of (1960) reported similar pH-activity curves for the
the surface. However, biomass was not distributed oxidation of a number of growth substrates by cells
evenly, with some areas sparsely populated while of Escherichiu coli attached to anion-exchange resins
others supported colonies several cells deep. Figure 5 and free cells. However, the activity curves were
shows examples of two such areas, with heavily- shifted to the alkaline side for attached cells and
colonized areas associated with extracellular slime maximum oxidation occurred at approximately I pH
material and cells apparently attached in polar orien- unit higher for attached cells compared to free cells.
tation. Figure 5 also shows preferential development This was explained in terms of a cationic layer formed
of colonies in pitted regions at the resin surface which outside an anionic layer on the surface of the resin,
may offer protection from abrasion and shearing such that attached ceils were exposed to a higher H+
forces. concentration than free cells. Conversely, Hattori and
Hattori (1963) reported a pH optimum for succinate
DISCUSSION
oxidation by Pseudomonas jluorescens attached to
cation-exchange resins to be 1 pH unit lower than for
Optimum reported pH values for nitrification in free cells. This was interpreted as the exposure of
liquid culture are usually on the alkaline side of attached cells to a lower H+ concentration than free
neutrality. Direct comparison with other studies is ceils. McLaren and Skujins (1963) reported a 0.5 pH
difficult due to the use of mixed inocula and different unit increase in pH optimum for nitrite oxidation by
growth media and incubation temperatures, but our Nitrobucter in soil, compared to liquid culture. In all
results are similar to published data. of these examples the altered activity of attached cells
The effect of pH on attachment to glass and was interpreted in terms of a pH difference of the
anion-exchange surfaces may be.explained in terms of attachment surface compared to that of the bulk
the variation in cell surface charge with pH. Most phase. However, the enhanced specific growth rate of
reported isoelectric points for bacterial cells lie in the Nitrobucter cells in our study was independent of pH
acidic range and, although the isoelectric point for and both attached and free. cells exhibited the same
Nitrobacter is not known, it is considered unlikely to pH optimum. In addition the similar net charge of
be above pH 6. Surface charge was unlikely to have glass surface and growth substrate, nitrite ions, does
been reversed over the pH range investigated and it not suggest that the enhanced rate is due to substrate
is therefore proposed that the cell surface was nega- accumulation at the attachment surface. Therefore,
tively charged and that enhanced attachment to two major factors which are frequently quoted to
positively charged resin surfaces at alkaline pH values explain the alteration of microbial activity at solid
was due to an increase in the magnitude of this surface, concentration of nutrients and an altered
charge. Conversely electrostatic repulsion between surface pH, do not appear to apply here for Nitro-
negatively charged cells and glass surfaces would butter cells attached to glass surfaces.
occur over the entire pH range investigated, resulting Colonization of anion-exchange resins in batch
in a smaller number of attached cells. Enhanced culture was reduced at lower pH values. This corre-
attachment to glass surfaces at pH 6 and 6.5 may sponds with the release of attached cells in the first
result from a reduction in the net cell surface negative column experiment following the pH reduction from
charge at pH values closer to the isoelectric point. In 8 to 6. In both cases colonization was at an early
continuous culture studies, reductions in pH resulted, stage and a significant proportion of the cells may
in one case, in desorption of a proportion of the have been only reversibly attached. Other reductions
attached population. This phenomenon was not in pH did not result in a decrease in attached cell
always observed and the effect of pH on established concentration or an increase in free cell concen-
attached populations is thought to be complicated by tration. Attached cells removed from the first column
irreversible attachment processes, such as extra- experiment at 980 h were observed by scanning
cellular slime production. This has been shown (Keen electron microscopy to be covered in slime material
and Prosser. 1987) to provide long-term permanent and such cells were unlikely to be susceptible to pH
adhesion of Nitrobacter cells on anion-exchange resin induced detachment.
beads (Cox et al., 1980). The transient response of attached cells in con-
In addition to electrostatic interactions, other tinuous culture following changes in pH was more
forces may be important in the association between variable than that of free cells. In both cases over-
Nitrobacter cells and anion-exchange resins. In par- shoots were never observed following an increase or
672 G. A. KaN and J. I. PROSER
decrease in pH but, while freely suspended cells factors which may influence activity in acid soils, e.g.
always exhibited undershoots, attached cells often microenvironments of neutral or alkaline pH, selec-
gave monotonic changes to new steady-state values. tion of acidophilic populations, but our results indi-
For example the reduction in pH from 8 to 6 imposed cate that these considerations are not necessary to
in the first column experiment resulted in an under- explain activity of autotrophic nitrite oxidizers in
shoot in nitrite concentration, although a similar pH such soils.
change from 8 to 5.5 imposed 800 h later did not
result in an undershoot. The largest undershoot was
observed when a reduction in pH was accompanied
by desorption of attached cells. The attached popu- REFERENCES
lation was therefore more robust to changes in en-
vironmental conditions, particularly when cells were Anthonisen A. C., Loehr R. C.. Prakasam T. B. S. and
reversibly attached, and similar behaviour was ob- Srinath E. G. (1976) Inhibition of nitritication by am-
monia and nitrous acid. Journo[ of rhe Wafer Pollution
served by Keen and Prosser (1987) and Bazin et al.
Control Federation 48, 835-852.
(1982) following step changes in dilution rate. Bazin M. J., Cox D. J. and Scott R. 1. (1982) Nitrilication
The three factors atTecting the influence of pH on in a column reactor: limitations, transient behaviour and
growth of Nitrobacter which were specifically in- effect of growth on a solid substrate. Soil Biology &
vestigated in our study were nitrite concentration, the Biochemistry 14, 477-487.
physiological state of the cells and surface growth. Cox D. J., Bazin M. J. and Gull K. (1980) Distribution of
Data from both batch and continuous culture bacteria in a continuous-flow nitrification column. Soil
demonstrated that the pH minimum for growth could Biology & Biochemistry 12, 241-246.
be. reduced from 6 to 5.5 by reducing nitrite concen- Fletcher M. M. (1985)Effectof solid surfaces on the activity
of attached bacteria. In Bacterial Adhesion: Mechanisms
tration to 4Opg NO; ml-’ or below, but growth at and Significance (D. C. Savage and M. M. Fletcher, Eds),
pH 5 was never observed in batch or continuous pp. 339-361. Plenum Pm&New York.
culture in the absence of surfaces. This applied even Focht 0. 0. and Vestraete W. (1977) Biochemical ecology
when freely suspended cells or cells attached to of nitrification and denitrification. Adrances in Microbial
anion-exchange resins taken from continuous culture Ecology 1, 135-214.
systems at pH 5.5 were used as inocula. Low nitrite Hattoti T. and Furusaka C. (1960) Chemical activities of
concentrations found in soil may therefore be Lcherichia coli adsorbed on a.resin. Journol of Bio-
important in reducing pH minima but would not chemistry (Tokyo) 48, 831-837.
explain nitrification in soils of pH less than 5. Hattori R. and Hattori T. (1963)The erect of a liauid-solid
interface on the life of micr&organisms. Ecoldgiccrl Re-
The physiological state of the cells did not appear
oiews 16, 63-70.
to affect response to pH for freely-suspended cells but Keen G. A. and Presser J. I. (1987) Steady state and
was important for attached cells. Growth in batch transient growth of autotrophic nitrifying bacteria.
culture occurred down to pH 6 (initial nitrite concen- Archives oi Microbioiogy 147, 73-79.
tration 50 pg NOT-N ml-‘) or pH 5.5 (initial nitrite Keen G. A. and Presser J. 1. (1988) The surface growth and
concentration less than 40 pg NO, -N ml-‘), regard- activity of Nilrobacrer. Mi&obiil Ecology lS;(In press).
less of the source of inoculum. In continuous culture Lees H. and Quastel J. H. (1946) Biochemistry of
freely-suspended cells grew at pH 5.5, because of nitrification in soil. 2. Site of soil nitrification. Biochemical
Journal 40, 8 I S-823.
reduced nitrite concentration, but would not grow at
McLaren A. D. and Skujins J. J. (1963) Nit&cation by
pH 5. Ceils attached to anion-exchange resins were
Nitrobacter ugilis on surfaces and in soil with respect to
active at pH 5 and below, but only in continuous hydrogen ion concentration. Canadian Journal of Micro-
culture. When used as inocula for batch culture, biology 9, 729-73 I.
growth did not occur below pH 6 (initial nitrite Painter H. A. (1986) Nitrification in the treatment of sewage
concentration 50 pg NO, -N ml-‘). and waste-waters. In Nirrl$cation (J. I. Presser. Ed.),
The major factor affecting the response to pH pp. 185-21 I. IRL, Oxford.
was surface growth, which allowed nitrite oxidation Prosser J. 1. and Bazin M. J. (1987) The use of packed
in continuous culture down to a pH of 4.5. Our column reactors to study microbial nitrogen trans-
experiments did not distinguish between growth and formations in the soil. In- A Handbook of bborarory
Svsrems for Microbial Ecosvsfem Research (J. W. T.
activity and nitrite oxidation at pH 4.5 may be
kimpenny, Ed.), CRC Press; Florida (In press).
possible without growth. However, the implications Skinner F. A. and Walker N. (1961) Growth of Nirro-
for nitrite oxidation in soil still apply. Established somonas europaea in batch and continuous culture. Archiu
populations of Nitrobacter irreversibly adsorbed to fur Mikrobiologie -38, 339-349.
soil particles and provided with a continuous supply Underhill S. E. and Presser J. I. (1987) Surface attachment
of low concentrations of nitrite may be capable of of nitrifying bacteria and their inhibition by potassium
high rates of nitrite oxidation. There are many other _ xanthate. Mrcrobial Ecology 14, (In press).
ethyl