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Proc. Natl. Acad. Sci.

USA
Vol. 82, pp. 1406-1409, March 1985
Biochemistry

Three-dimensional structure of thaumatin I, an intensely


sweet protein
(sweet taste/taste reception/sweet determinants/thaumatin crystal structure)

ABRAHAM M. DE VOS*, MARCOS HATADAt, HENK VAN DER WEL*, H. KRABBENDAM§, A. F. PEERDEMAN§,
AND SUNG-HOU KIMt
tDepartment of Chemistry and Lawrence Berkeley Laboratory, University of California, Berkeley, CA 94720; tUnilever Research Laboratory, Vlaardingen,
The Netherlands; and Department of General Chemistry, University of Utrecht, Utrecht, The Netherlands
Communicated by Daniel E. Koshland, Jr., October 31, 1984

ABSTRACT Thaumatin and monellin are the two sweetest with almost identical molecular weights of 22,000. They con-
compounds known to man-about 100,000 times sweeter than sist of 207 amino acids and have identical amino acid se-
sugar on a molar basis and 3000 times on a weight basis. These quences except for five residues (3, 4). There are no histidine
proteins represent a unique class of proteins that are taste- residues, but there are eight disulfide bonds. Partially pure
active. We report the three-dimensional structure of thauma- thaumatin is available commercially from Sigma and a purifi-
tin I at 3.1 A resolution. cation procedure has been published (2). Although both
monellin and thaumatin are intensely sweet there is a very
Taste is one of the least understood senses from a biochemi- limited amino acid homology between them: five regions of
cal point of view. Sweet taste can be elicited to varying de- thaumatin have tripeptide homologies with five regions of
grees by a wide variety of compounds in high concentration, monellin (3). Whether one of these homologous tripeptides
such as mono- and disaccharides, several amino acids, di- or any combination of them is responsible for the sweet taste
peptide derivatives, glycerol, cyclamates, saccharine, ace- is not known.
sulfame, some hydrated inorganic compounds, and others. Thaumatin, with many basic groups, has a pI of 12. Acyla-
Sensations of sweet taste are elicited by sweet compounds tion and methylation of lysine residues and modification of
binding to sweet receptors of taste buds on the tongue, simi- arginine residues indicate that some lysine residues are im-
lar to hormone-hormone receptor binding. However, the portant for the sweet taste (5, 6), but the data do not identify
similarity ends here. A 50% binding of hormone receptors which basic residue or residues are important for the taste.
usually occurs at around 10-8 to 10-11 M concentration of Antibodies raised against thaumatin have been shown by
hormones, but in the case of sweet receptors the concentra- van der Wel and Bel (7) and Hough and Edwardson (8) to
tion to register sweet taste is about 10-1 to 10-3 M of su- cross-react with monellin. Reciprocal experiments also show
that antibodies raised against monellin cross-react with thau-
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crose. Furthermore, like other sensory perceptions, taste is


associated with a unique set of sensation parameters. These matin (unpublished results). These results suggest structural
are threshold concentration, onset time, intensity, saturation similarity between portions of the two sweet protein mole-
concentration, lingering time, aftertaste, and potentiation of cules. Furthermore, when these proteins are bound to their
other tastes or flavors. Systematic studies of these proper- respective cross-reacting antibodies, the sweetness disap-
ties of taste-active compounds have been difficult in the past pears (unpublished results).
because of high levels of nonspecific binding between the
sweet comnpounds and the sweet receptors due to the high METHODS
concentrations of the sweet compounds required to elicit the
sweet taste. Thaumatin I has been crystallized in two different crystalline
One of the most interesting and unusual recent findings is forms (9). Both crystalline forms are unstable in most heavy
the existence of two intensely sweet proteins, monellin and atom soaking conditions (unpublished results). We have sub-
thaumatin (for a recent review, see ref. 1). The sweet taste of sequently found a new crystallization condition that made it
the proteins can be registered at a very low concentration possible to obtain many heavy atom derivatives. The new
(10' M), comparable to those in hormone-hormone recep- crystal form has the same space group as the previous one
tor interaction. These proteins are about 100,000 times (9) but with slightly different unit cell parameters. These
sweeter than sucrose on a molar basis and several thousand crystals diffract to 1.6 A resolution and are stable in the pres-
times sweeter on a weight basis. In fact, these two proteins ence of many different heavy atom compounds that we have
are the two sweetest compounds known to man. With these tried so far. The best crystal forms are obtained from a solu-
proteins, studies similar to those performed for hormone- tion containing 20 mg of protein per ml, 50 mM Hepes buffer
hormone receptors can be initiated. Three-dimensional (pH 7.0), and 1.5 M ammonium sulfate. This solution is
structures of these proteins are likely to provide a solid foun- equilibrated with 2.0-2.5 M ammonium sulfate through va,
dation upon which studies to understand the molecular basis por-phase equilibrium at room temperature. The crystals are
of sweet taste can be designed. We here report the crystal then transferred to an artificial mother liquor containing 2 M
structure of thaumatin I at 3.1 A resolution. ammonium sulfate and 50 mM Hepes buffer at pH 7. After a
Thaumatins have been isolated from the fruit of a West week or more, they are used for data collection or heavy
African rain forest shrub, Thaumatococcus daniellii Benth atom soaking.
(2), which has been used for centuries by inhabitants of the The space group of the crystal is P212121 with cell parame-
region to sweeten foods such as bread and palm wine, There ters of 74.42 x 53.38 x 52.25 A. Density measurement of the
are two major sweet proteins in the fruit, thaumatin I and II, crystals indicated one protein molecule per asymmetric unit,
The publication costs of this article were defrayed in part by page charge Abbreviation: MIR, multiple isomorphous replacement.
payment. This article must therefore be hereby marked "advertisement" *Visiting Scientist from the University of Utrecht, Utrecht, The
in accordance with 18 U.S.C. §1734 solely to indicate this fact. Netherlands.

1406
Biochemistry: de Vos et aL Proc. NatL Acad. Sci USA 82 (1985) 1407

Table 1. Heavy atom soaking


Concentration, Time, R factor, No. of Temp. factors,
Compound mM days F sites Occupancies, e A2
KAu(CN)2 30 11 13 4 30.1, 13.3, 10.2, 13.5 49, 49, 41, 47
K2Pd(CN)4 30 2 16 3 24.5, 13.4, 14.8 24, 14, 17
K2PtI6 10 13 18 5 18.3, 14.3, 29.4, 17.4, 13.7 31, 29, 21, 23, 25
K2Pt(SCN)6 10 3 19 5 42.6, 30.6, 18.3, 10.5, 9.3 46, 53, 38, 24, 30
K2Hg(SCN)4 10 8 19 5 46.4, 17.2, 15.3, 15.5, 13.0 34, 32, 43, 36, 30
K2HgI4 0.5 7 12 4 18.5, 21.0, 19.0, 11.9 34, 32, 35, 43

with 50o of the crystal volume being solvent. X-ray diffrac- were extended from 3.5 A to 3.1 A by using a program by
tion data were collected at 40C on a Nicolet four-circle auto- Wang (ref. 12; see Table 3). This new map not only resolved
matic diffractometer modified with an extended detector a few ambiguous regions in the MIR map but also enabled us
arm and helium-filled incident and diffracted beam collima- to trace the entire backbone: almost all large side chains,
tors. Ni-filtered CuK-a wavelength was used. Using an o- such as tryptophanes, phenylalanines, and tyrosines, could
step scan, diffraction intensities were measured at seven be recognized at locations expected from the amino acid se-
steps spanning 0.20 in c near each diffraction center, and the quence of the protein. Furthermore, eight disulfide bonds
highest sum of five consecutive steps representing the flat were clearly visible (see below).
peak top (10) was taken to represent the integrated diffrac-
tion intensity of each reflection. Crystal decay was moni- RESULTS
tored by several standard reflections, and an absorption cor-
rection was applied according to the semiempirical method The most prominent feature of the structure (see Fig. 1) is a
using 4i scans (11) of several reflections with X values near domain consisting of a long /3 sheet folded over into a flat-
900. tened "X3 barrel." Of the 11 /3 strands in this domain, each
From many soaking experiments, six derivatives were strand is antiparallel to its neighbors with the exception of
chosen as best for phase determination: KAu(CN)2, the NH2-terminal strand and the COOH-terminal strand,
K2Pd(CN)4, K2PtI6, K2Pt(SCN)6, K2Hg(SCN)4, and which are parallel to each other. Unlike many protein struc-
K2HgI4. R factors between the native and the above six de- tures with 13 barrels (for a review, see ref. 13), the /3 strands
rivative data sets at 3.5 A resolution are 13%, 16%, 18%, of one flat sheet are almost parallel to and on top of those of
19%, 19%, and 12%, respectively (see Table 1). The average the other sheet. Both sheets exhibit the usual right-handed
figure of merit after refinement by the multiple isomorphous twist (13). One short and one long /3 strand at the ends con-
replacement (MIR) method is 0.78 with phasing power (rms nect the two sheets to form the flattened /3 barrel. To this
FH/residual) ranging between 1.4 and 2.0. A summary of the main domain are attached two small domains rich in disul-
phase refinement results is shown in Table 2. fide bonds. Fig. 2 shows a simplified schematic diagram
An electron density map was calculated by using the showing the arrangement of the main domain (I) and the two
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phases determined by the MIR method. The map showed a attached small domain appendages (II and III) with short /3
clear molecular boundary and P structures over a large por- ribbons and disulfide bonds. Fig. 2 also shows the secondary
tion of the molecule. Although most of the backbone could structure topology of the molecules as well as the assignment
be traced into several fragments, it was impossible to trace of the disulfide bonds.
the backbone uniquely from this map. The presence of eight Our backbone structure makes a unique assignment of
disulfide bonds further complicated interpretation of the eight disulfide bonds, as shown in Fig. 2, which agrees very
map. Subsequently, the phases were improved by flattening well with that based on biochemical studies (14) except for
the solvent regions outside the molecular boundaries and the two disulfide bonds 134-145 and 149-158. The electron
Table 2. Refinement statistic for the heavy atom derivatives
Resolution, A 12.6 9.2 7.2 5.9 5.0 4.4 3.9 3.5
Reflections, no. 58 106 184 262 363 476 626 774

KAu(CN)2
R-Cullis 0.54 0.50 0.52 0.52 0.61 0.68 0.73 0.80
rms FH/residual 1.55 1.81 1.75 2.09 1.72 1.48 1.18 1.04
K2Pd(CN)4
R-Cullis 0.41 0.54 0.56 0.51 0.55 0.65 0.61 0.71
rms FH/residual 2.17 1.60 1.75 2.03 1.58 1.25 1.26 1.23
K2PtI
R-Cullis 0.51 0.37 0.44 0.55 0.51 0.57 0.57 0.65
rms FH/residual 1.90 2.00 2.32 2.24 1.92 1.90 1.50 1.52
K2Pt(SCN)6
R-Cullis 0.51 0.51 0.64 0.62 0.71 0.70 0.75 0.78
rms FH/residual 1.37 1.39 1.71 1.91 1.55 1.58 1.43 1.23
K2Hg(SCN)4
R-Cullis 0.61 0.58 0.49 0.47 0.64 0.63 0.67 0.66
rms FH/residual 1.09 1.13 1.55 1.99 1.98 2.02 1.77 1.64
K2HgI4
R-Cullis 0.53 0.45 0.46 0.49 0.47 0.62 0.68 0.70
rms FH/residual 1.99 2.79 3.17 3.27 3.08 1.77 1.26 1.38

Figure of merit 0.83 0.86 0.88 0.87 0.85 0.79 0.73 0.71
1408 Biochemistry: de Vos et aL Proc. NatL Acad Scd USA 82 (198S)

Table 3. Density modification and phase extension I[


lilt
I* Ilt a b
Resolution, A 3.5 3.5 3.5 3.1
Reflections, no. 2614 2614 2614 1034
Figure of merit 0.78 0.89 0.90 0.68
R factor 0.22 0.24 0.27
Aa' 15 15
= S(Fob, - FC,1)2/1F2bs. Aa0 = Average accumulated phase dif-
ference.
*Original MIR data.
tAfter solvent flattening.
tAfter solvent flattening and phase extension; a = original data (to
3.5 A) and b = new data (3.5-3.1 A).

density map of these regions is clear and the assignments are


unambiguous.
Although the sweet intensities of thaumatin and monellin
are similar, there is only a very limited homology in the ami-
no acid sequences of the two proteins. As mentioned earlier,
five tripeptides in monellin have their homologous counter-
parts in thaumatin at residues 94-96, 100-102, 101-103, 118-
120, and 128-130 (3). Four of these are located in the main FIG. 2. Topological structure of thaumatin I. There are two (3
domain I and one is between domains I and II (for a stereo- sheets in the structure. The 13 strands of the top sheet are indicated
drawing of the backbone structure, see Fig. 3). All five re- by wide arrows and those of the bottom sheet, by narrow arrows.
gions are well exposed. It is likely that some of these regions Also shown are three domains of the protein and a crystallographic
are responsible for the immunological cross-reactivity be- assignment of disulfide bonds shown in black vertical bars.
tween monellin and thaumatin, and their conformation may
be important for sweet receptor binding.
ing motifs: a folded 3 sheet, or a flattened P "barrel," and
DISCUSSION the P ribbons and small loops stabilized by disulfide bonds.
The first motif is found in many other proteins (13), and the
Thaumatin and monellin are the two sweetest compounds second is found in snake venom toxin, bungarotoxin, wheat
known to man and represent a unique class of proteins that germ agglutinin, cytotoxins, and ragweed pollen allergens
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are taste-active. The thaumatin structure utilizes two build- (15), all of which bind to membrane-bound receptors. There-
fore, it is tempting to speculate that domain II or III (or both)
may be important for binding to the membrane-bound sweet
receptors.
As mentioned earlier, antibodies raised against thaumatin
cross-react with monellin and vice versa. It will be interest-
ing to compare the crystal structures of both thaumatin and
monellin. The crystal structure of the latter awaits determi-
nation.
Recently the gene for thaumatin II has been cloned (4) and
expressed (16). Thaumatin II is as intensely sweet as thau-
matin I but is different from it at five positions [residues 46,
63, 67, 76, and 113 (4)]. It is almost certain that thaumatin II
has the same three-dimensional structure as thaumatin I de-
scribed here. The crystal structure of thaumatin may provide
an important insight as to what regions of the molecule may
need to be systematically analyzed by either site-specific
mutation or some other methods to investigate the struc-
ture-taste relationship of this protein and the associated
properties of sweet taste.

We are grateful to our colleagues, Stephen Holbrook, Craig


Ogata, David Pearlman, Gary Smith, and Everett Harvey (Universi-
ty of California, Berkeley) for various advice and help on computer
programs and hardware and to Dr. B. C. Wang (Veterans Adminis-
tration Hospital, Pittsburgh, PA) and Dr. T. N. Bhat (National Insti-
tutes of Health, Bethesda, MD) for their programs for phase im-
FIG. 1. Backbone structure of thaumatin I. The main body of the provement by solvent flattening. The purified thaumatin I was pro-
structure consists of two ,B sheets forming a flattened ,B barrel. vided by H.v.d.W. and preliminary crystallographic studies on
Strands in the top sheet are shaded light, and those in the bottom thaumatin I, crystallized from a condition different from that de-
sheet are darker. Open bars represent disulfide bonds, and the re- scribed here, were performed at the laboratory of H.K. and A.F.P.
gions with sequences homologous to monellin are indicated by the The work described here has been performed at the University of
hatched marks. The viewing direction is along the crystallographic C California, Berkeley, with the support of the National Institutes of
axis. Health (NS 15174) and the Department of Energy.
Biochemistry: de Vos et aL Proc. NatL Acad. Sci USA 82 (1985) 1409

FIG. 3. Stereodrawing of the backbone structure of thaumatin I. To improve the visibility of the stereodrawing, the viewing direction is
slightly tilted from the crystallographic C axis.
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Wassenaar, P. D. (1979) Eur. J. Biochem. 96, 193-204. 11. North, A., Phillips, D. & Mathews, F. (1968) Acta Crystal-
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