This document contains an assignment on industrial microbiology from September 2020 made by Addhyan Negi with roll number 18/IBT/002. It includes 11 questions on topics related to bacterial genetics and genetic recombination, such as the Griffith experiment, conjugation, transduction, plasmids, horizontal gene transfer, and the role of viruses in bacterial genetic recombination. Answers are provided for each question discussing the relevant topics in 1-2 sentences each.
This document contains an assignment on industrial microbiology from September 2020 made by Addhyan Negi with roll number 18/IBT/002. It includes 11 questions on topics related to bacterial genetics and genetic recombination, such as the Griffith experiment, conjugation, transduction, plasmids, horizontal gene transfer, and the role of viruses in bacterial genetic recombination. Answers are provided for each question discussing the relevant topics in 1-2 sentences each.
This document contains an assignment on industrial microbiology from September 2020 made by Addhyan Negi with roll number 18/IBT/002. It includes 11 questions on topics related to bacterial genetics and genetic recombination, such as the Griffith experiment, conjugation, transduction, plasmids, horizontal gene transfer, and the role of viruses in bacterial genetic recombination. Answers are provided for each question discussing the relevant topics in 1-2 sentences each.
Teacher’s Signature Q1) Griffith experiment of DNA transfer
Ans - Frederick Griffith performed experiments on
Streptococcus pneumoniae which is responsible for causing pneumonia. He observed that the bacteria produce two colonies as: R strain: rough colonies which are non-virulent. S strain:smooth colonies which are virulent and caused the death of mice. He observed that S cells are virulent due to the production of a smooth polysaccharide coat which is absent in R cells. He performed the following experiment: Mice + R- cell bacteria ----> Mice lived Mice + S- cell bacteria ------> Mice died Then he killed S- celled bacteria by heating which caused denaturation of its genetic material and then injected in mice. Mice + Heat killed S- cells------> Mice lived Now he injected mice with heat killed S- cells and non-virulent R- cells. Mice + Heat killed S- cells + R- cells----->Mice died. Then he recovered living S- cells from the dead mice. Then he concluded that some transforming principle had been transferred from heat killed S- cells to living R- cells which enables R- cells to secrete polysaccharide coat and become virulent. Q2.Which type of bacterial genetic recombination requires cell - cell contact
Ans. Conjugation, Genetic recombination in which there is a
transfer of DNA from a living donor bacterium to a living recipient bacterium by cell-to-cell contact. In Gram-negative bacteria it typically involves a conjugation or sex pilus. Conjugation is encoded by plasmids or transposons.
Q3. What are HFR strains?
Ans - A strain of bacteria that possesses the F factor integrated
into the bacterial genome, hence, when it conjugates with another bacterium, it attempts to transfer a copy of the F factor as well as a portion of or the entire chromosome to the recipient bacterium. Hfr stands for (high frequency of recombination) first described by the population geneticist, Luca Cavalli-Sforza. The bacterial cell that acquires F plasmid and incorporates to the bacterial chromosome through crossover, the cell is now designated as Hfr. Q4. Difference between generalized and specialized transduction
Ans. As we know, Bacterial recombination is a type of genetic
recombination in bacteria characterized by DNA transfer from one organism called donor to another organism as recipient.and we also know this process occurs in three main ways: Transformation, Transduction, Conjugation In transduction, the virus, mediated transfer of DNA between bacteria. Transduction is the process by which foreign DNA is introduced into a cell by a virus or viral vector. An example is the viral transfer of DNA from one bacterium to another and hence an example of horizontal gene transfer. Transduction does not require physical contact between the cell donating the DNA and the cell receiving the DNA (which occurs in conjugation), and it is DNase resistant (transformation is susceptible to DNase). Transduction is a common tool used by molecular biologists to stably introduce a foreign gene into a host cell's genome in both bacterial and mammalian cells as well. Q5. What are Auxotrophs
Ans - Auxotrophy is a term that refers to a situation where an
organism cannot make a compound that is required for its growth. In other words, it needs to pop a few supplement pills in order to grow. auxotroph is an organism requiring increased nourishment. This is usually said with respect to a comparison to another organism or, in general, with respect to an idea like increased nourishment for overall growth regardless of any other comparison to another organism.
Q6. Write short note on F Factor
Ans. Bacterial cells may carry one or more small DNA
molecules in the cytoplasm called plasmids. Of the various kinds of plasmids, a few are involved in conjugation and are called conjugative plasmids. One such conjugative plasmid is the sex element or fertility or F factor. The presence or F factor in different strains has given rise to two mating types in bacteria namely, the donor which possesses the fertility factor and referred to as F+ strain, the second which lacks F factor is the F– strain. The F factor is itself the genetic element which is passed from donor to recipient cells during conjugation. There is no conjugation between two F+ strains or between two F– strains. Structure of F strain The F element contains about 2 per cent of the cell’s total DNA. It is capable of autonomous replication. It is made up of a circular, double stranded DNA molecule of molecular weight approximately 35 x 106. It contains about 15 genes, 8 of which control the formation of F-pili or sex pili which are hair-like appendages extending from the surface of F+ cells. F pili function in conjugation.
Q7.Write short note on EPISOME
Ans. An episome is a portion of genetic material that can exist
independent of the main body of genetic material (called the chromosome) at some times, while at other times is able to integrate into the chromosome.Examples of episomes include insertion sequences and transposons. Viruses are another example of an episome Another example of an episome is called the F factor. Q8. What is competence Cell
Ans. Cell competence refers to a cell’s ability to take up foreign
(extracellular) DNA from its surrounding environment. The process of genetic uptake is referred to as transformation. In some cases, the genetic material taken in by a cell can become incorporated, or recombined, into its own genome
Q9. What is PCR?
Polymerase chain reaction, or PCR, is a technique to make many
copies of a specific DNA region in vitro (in a test tube rather than an organism). PCR relies on a thermostable DNA polymerase, Taq polymerase, and requires DNA primers designed specifically for the DNA region of interest. In PCR, the reaction is repeatedly cycled through a series of temperature changes, which allow many copies of the target region to be produced. PCR has many research and practical applications. It is routinely used in DNA cloning, medical diagnostics, and forensic analysis of DNA. Q10. What is horizontal gene transfer?
Ans Horizontal gene transfer (HGT) is the movement
of genetic information between organisms, a process that includes the spread of antibiotic resistance genes among bacteria (except for those from parent to offspring), fueling pathogen evolution. Many resistance genes evolved long ago in natural environments with no anthropogenic influence but these genes are now rapidly spreading to and among human pathogens. HGT occurs by three well-understood genetic mechanism
Q11. Discuss role of viruses in bacterial genetic
recombination
Ans Bacterial recombination is a type of genetic
recombination in bacteria characterized by DNA transfer from one organism called donor to another organism as recipient.and we also know this process occurs in three main ways: Transformation, Transduction, Conjugation In transduction, the virus, mediated transfer of DNA between bacteria. Transduction is the process by which foreign DNA is introduced into a cell by a virus or viral vector. An example is the viral transfer of DNA from one bacterium to another and hence an example of horizontal gene transfer. Transduction does not require physical contact between the cell donating the DNA and the cell receiving the DNA (which occurs in conjugation), and it is DNase resistant (transformation is susceptible to DNase). Transduction is a common tool used by molecular biologists to stably introduce a foreign gene into a host cell's genome in both bacterial and mammalian cells as well.