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A question that keeps raising its head when working in a regulated laboratory is can chromatographers
integrate peaks manually? If they can, when can they do it? Also if they can manually integrate, when
should they not do it?
One of the red rags to a regulatory change during a run, so getting the the functionality is essentially the same.
bull is the issue of manual integration right overall integration can be a Chromatographic integration begins
of chromatograms. If seen during an balancing act. when the CDS samples the detector
inspection, you can almost see the The regulators are wrong in their output using an analogue to digital
wheels in the inspector’s brain turn in requirement for a procedure on manual converter (A/D). An integration method
mechanical precision as they question: integration. What is required instead is a in the CDS determines the frequency
are they testing into compliance? In a standard operating procedure (SOP) for of the detector data collection and
2014 FDA inspection of a laboratory chromatographic integration, of which analysis run time. Dependent on the
in Europe, one FDA 483 observation manual integration is an important CDS, either an integration method or a
stated: sub-set. Although the focus of this processing method will be automatically
No procedure exists describing how
column is manual integration please applied to the file of data slices to
to perform manual integration.
do not lose sight of the bigger picture. calculate the peak areas or heights.
As such, we will not be discussing The processing method will contain the
A more serious non-compliance the various calibration methods that identities of the peaks of interest and
occurred in the FDA warning letter to could be applied to standards to their expected elution time windows.
Leiner Health Products (1): quantify analytes in samples nor will These data files and their interpretation
In addition, our investigators
we be looking at analogue to digital constitute part of the raw data and
documented many instances with conversion because the latter has primary record for the analysis. We will
extensive manipulation of data been covered in an earlier Questions of discuss the definition of primary record
with no explanation regarding why Quality column (3). Furthermore we will in the next Questions of Quality column
the manipulation was conducted. not be considering the use of system (9) in light of the two MHRA data
This manipulation would include
changing integration parameters suitability tests (SSTs), again because integrity guidance documents issued
or relabelling peaks such that this column has already discussed this year (10,11).
previously resolved peaks would them (4–6). The paper by Hill et al. (7) The two most important parameters
not be integrated and included in on manual reintegration in bioanalysis is for integration are sampling rate
the calculation for impurities.
also a highly recommended publication and peak threshold. In combination
There have been many other cases to read on the subject. they determine the slices for peak
that I summarized in a recent Questions measurement but also suppress noise
of Quality column on the role of Back to Integration Basics to allow better peak measurement (8).
chromatography data systems (CDS) Before we can discuss how to control • Peak width or sampling rate setting
in data falsification (2). What regulatory and manage manual integration it is governs how often the detector
guidance is there to help us? We need important to understand the basics output is sampled, which directly
to consider some basics of integrating of chromatographic integration itself. impacts the accuracy of peak area
chromatographic peaks before we The best book on the subject of measurement. If the sampling rate
can look at manual integration and the integration is by Norman Dyson (8) is too slow it could result in the
regulatory guidance surrounding it. The and, although the second edition was integration missing a small fast
reason for this is simple: if integration published in 1998, it is still applicable eluting peak or a valley between
parameters are set correctly and the and highly recommended if you two peaks. Conversely, too fast
chromatography is acceptable then want to understand chromatographic a data acquisition rate can be
there should be no need to reintegrate integration. The key integration managed by data bunching in the
manually in many cases. However, parameters are shown in Table 1 and CDS software. Typically you should
we also need to acknowledge that the main ones are discussed below. sample a peak at least 20–30 times
chromatographic systems are dynamic Note that some CDS suppliers may call across its width so that it can be
by their nature and separations can these parameters a different name but integrated accurately; for example,
2 LC•GC Europe June 2015
QUESTIONS OF QUALITY
compliance hell.
Figure 2: Examples of peak shaving (2) and peak enhancing (3).
• Integration parameters are different
for standards and the unknown
1000 samples of the same run or between
replicate injections of the same
unknown sample in an analytical
batch.
• Evidence that the audit trail in the
system has been turned off and then
Millivolts
involved as a co-chair, and the outcome and the final integration data should have a fighting chance for automatically
from that meeting was a scientific paper be documented at the laboratory and integrating your peaks and there is no
on the subject (19). After a follow-up should be available upon request. need to intercede manually. However,
conference in 1999, the FDA issued we now need to turn our attention to
Guidance for Industry on Bioanalytical Although both the FDA and EMA manual integration. As we can see
Method Validation (20). In the section allow reintegration of chromatograms, from the regulatory citations and the
dealing with routine analysis of samples it must be under controlled conditions bioanalytical guidance documents,
there is mention of sample data and must be reported in the final what is needed is an SOP to control,
reintegration: report along with who authorized the manage, and authorize integration —
• An SOP or guideline for sample data reintegration and what the original both automatic and manual.
reintegration should be established. results were together with the need In an ideal world there would be
• This SOP or guideline should explain for audit trail entries and justification. a definition of manual integration.
the reasons for reintegration and how Personally, I prefer the European However, there is not a definition
the reintegration is to be performed. approach because the FDA guidance available for manual integration that I
The rationale for reintegration is over-bureaucratic. This is particularly could find. Neither in Dyson, nor on any
should be clearly described and the case as the FDA requirement for regulatory website. This was the point
documented. documentation of the requestor and made by Hill et al. (7), who discussed
• The original and the reintegration data authorization by a manager will have the scope and terminology of manual
should be reported. to be outside of a CDS because there reintegration and they concluded that
are currently no functions available to it is essential to develop a consensus
Later in the document, in the section perform this. If required by regulators with respect to definitions. The problem,
on reports for routine studies, there is this needs to be included as a function they noted, is that that a consensus
another section on Documentation for in future versions of chromatography does not exist.
Reintegrated Data (20), which, in part, data systems. This raises an important question: if
requires: we can’t define manual integration how
• The method used for reintegration. What is Missing? can we write an SOP on integration as
• The reason for the reintegration. In reading both the GMP and GLP a whole?
• The requestor of the reintegration and regulations, the European and US
the manager authorizing reintegration. Pharmacopoeia general chapters Scope of an Integration SOP
• Reintegration of a clinical or on chromatography, and the three In the spirit of the early pioneers,
preclinical sample should be bioanalytical method validation this column will present a possible
performed only under a predefined guidance documents, it strikes me approach to writing an SOP in the form
SOP. that there is a fundamental element of a flowchart that will consider some,
missing from the equation. The only but not all, options for both automatic
In 2013, the FDA issued a draft publications that discuss integration and manual integration. Of course,
revision of this Guidance for Industry are the bioanalytical method validation there is a little trepidation because one
where sample data integration was guidance documents. However, the definition of pioneer is finding new and
updated (please remember that focus in all three publications is on exotic ways to die (!) However, I hope
the guidance is still a draft), but the the application of a validated method that this column and my views stimulate
key requirements are essentially NOT on the validation of the analytical a debate about what constitutes manual
unchanged. There is a rearrangement method itself. integration and we can get a definition
of the order listed above with the It is essential that validation of agreed upon.
additional need to retain audit trail ANY analytical procedure includes In this discussion we need to
information from the CDS (21). the integration parameters along balance sound science with regulatory
At last we are getting somewhere! with other methods measured in any compliance. Therefore, let me pose
We now have some guidance albeit method that utilizes chromatography. a question — which is worse: not
in the good laboratory practice (GLP) Note that the stimulus to the revision reintegrating when you know the results
arena. But wait! There is more! Not paper published in 2013 by Martin et are wrong or accepting wrong results
to be outdone by their American al. (23) for a life cycle approach did when you can see an unknown peak in
cousins, the EMA (European Medicines not discuss the inclusion of integration the sample chromatograms? You see
Agency) produced their own guidance parameters (24). I would strongly the dilemma? We know the outcomes
document on Bioanalytical Method suggest that the draft general chapters of both situations are undesirable, but
Validation (22) in 2011. Section 5.5 is include the requirement for stating as a result of inflexible procedures or
concise and devoted to the subject of integration parameters within the life fear of the regulations sound scientific
integration: cycle of analytical procedures involving judgement cannot be exercised.
• Chromatogram integration and chromatography. First, let us consider a “no manual
reintegration should be described in a integration allowed” option. Personally, I
SOP. What is Manual Integration? think that this is an untenable situation,
• Any deviation from this SOP should So far we have discussed the regulatory particularly if a regulated laboratory
be discussed in the analytical report. issues around peak integration, the is using recently developed methods,
• Chromatogram integration parameters main integration parameters, and the analyzing impurities where the limits of
and in case of re-integration, initial three rules of integration so that you quantification or detection are close to
www.chromatographyonline.com 5
QUESTIONS OF QUALITY
It’s All Plain Sailing Now? using a scientifically sound, justifiable, comments made during the preparation
Let us return to the scenario we and transparent process. We are of this column.
discussed earlier at the top of the looking at consistency of an integration
flowchart in Figure 3. If the automatic technique among all trainees to ensure References
integration has failed because the a consistent approach, which can (1) Leiner Health Products, FDA Warning
Letter (Aug 2007)
peaks have slipped out of the retention be provided via a CDS by copying (2) R.D. McDowall, LCGC Europe 27(9),
windows (option 1 in the manual methods and chromatograms 486–492 (2014).
intervention section) do you want to to a training project or directory (3) C. Burgess, D.G. Jones, and R.D.
McDowall, LCGC International 10(12),
trigger a laboratory investigation? and allowing chromatographers
791–796 (1997).
Especially when the peak windows to integrate the same files. One (4) R.D. McDowall, LCGC Europe 23(7),
are readjusted and, after reintegration, outcome of the training is that trained 368–374 (2010).
the run now passes. The peaks chromatographers will think about (5) R.D. McDowall, LCGC Europe 23(11)
585–589 (2010).
are now correctly labelled and the where they place a baseline when (6) L. Kaminski et al., LCGC Europe 24(8),
peak areas are unchanged after the manually integrating a peak so that it is 418–422 (2011).
manual intervention. Although the FDA scientifically justified and complies with (7) H.M. Hill, D. Bakes, and I. Love,
Bioanalysis 6(9), 1171–1174 (2014)
classifies this situation under “manual the laboratory procedure. (8) N. Dyson, Chromatographic Integration
integration”, there is no change to Another outcome of the training Methods. Second Edition (Royal Society
the actual measurement of the peaks is that all trainees must understand of Chemistry, Cambridge, UK, 1998).
that unauthorized manual integration (9) C. Burgess and R.D. McDowall, LCGC
of interest. Should this situation be
Europe, in preparation
classified as manual integration? outside of the scope of the SOP is (10) MHRA GMP Data Integrity Definitions
In my opinion no – this is a manual considered as data falsification. The and Guidance for Industry, Medicines
intervention but not reintegration. This more times that a run is reprocessed and Healthcare products Regulatory
Agency, London (January 2015).
is not intended to be word play but either via manual intervention or (11) MHRA GMP Data Integrity Definitions
a means of trying to define exactly manual integration the more quality and Guidance for Industry, Medicines
what the regulators want in light of assurance and regulatory scrutiny it and Healthcare products Regulatory
Agency, London (March 2015).
zero guidance and multiple citations will attract, that is, the larger the size
(12) EU GMP Chapter 6 on Quality Control
on the subject. Furthermore, because of the red rag. Unfortunately large red (2014).
there is no agreed definition of the rags are not very effective at stopping (13) FDA Current Good Manufacturing
term we have a problem – would regulatory bulls. Practice for Finished Pharmaceutical
Products, 21 CFR 211 (2009).
this be permitted? Would you take As a final comment, chromatographic (14) R.D. McDowall, LCGC Europe 26(6),
the Clint Eastwood approach to risk integration should be included in the 338–343 (2013).
management by feeling lucky or could data integrity self-inspections to ensure (15) R.D. McDowall, LCGC Europe 26(7),
389–392 (2013)
you justify that this is an acceptable that the training and procedure are (16) FDA Compliance Program Guide
practice? being complied with in operational use. 7346.832 Pre Approval Inspections
Ideally the SST, standards, and QC (2010, effective 2012).
(17) European Pharmacopoeia 2.2.46
samples should be integrated the Summary
Chromatographic Separation Techniques
same way consistently throughout We have discussed manual integration (18) United States Pharmacopoeia <621>
the run; however, this may not be in the context of a regulated laboratory Chromatography (United States
the case, particularly near limits of and have found a number of problems. Pharmacopeial Convention, Rockville,
MD, USA).
quantification or detection. Let us Regulations and guidance are lacking (19) V.P. Shah et al., Pharmaceutical
look at a different situation that can in GMP and the only guidance on the Research 9, 588–592 (1992)
arise when operational efficiency is subject is for regulated bioanalytical (20) FDA Guidance for Industry, Bioanalytical
Methods Validation. FDA, Rockville, MD,
considered and different material laboratories, which can result in
USA (2001).
types are analyzed in a single run. an overly bureaucratic approach. (21) FDA Draft Guidance for Industry,
Although the method is validated for However, we lack an agreed definition Bioanalytical Methods Validation. FDA,
these different sample types, there can of what constitutes manual integration. Rockville, MD, USA (2013).
(22) European Medicines Agency, Committee
be differences in the chromatography Notwithstanding this minor problem, for Medicinal Products for Human Use.
that require different integration a suggested workflow for determining Guideline on Bioanalytical Methods
parameters. So how can you apply the how manual intervention and manual Validation. European Medicines Agency,
London, UK (2011).
same integration parameters across integration can be combined in an (23) G.P. Martin et al., Pharmacopoeial
the run? The classic example is mixing overarching SOP on chromatographic Forum 39(5), (September–October 2013)
APIs and stability samples where integration to meet regulatory concerns. (Available on-line at www.usp.org).
(24) R.D. McDowall, LCGC Europe 27(2),
the methods have different aims; for I hope this will stimulate a debate
91–97 (2014).
example, determination of purity versus to define what constitutes manual
degradation. Perhaps the case of data integration and that regulatory agencies “Questions of Quality” editor Bob
integrity should win over operational will provide guidance on the subject — McDowall is Director at R.D. McDowall
efficiency and it would be better to eventually Ltd, Bromley, Kent, UK. He is also a
separate different types of analytical member of LCGC Europe’s editorial
procedure? Acknowledgements advisory board. Direct correspondence
Regardless of the content of the I would like to thank Chris Burgess, about this column should be addressed
final SOP, chromatographers must be Howard Hill, Brian Jones, Mark to the editor‑in-chief, Alasdair Matheson,
trained to perform manual integration Newton, and Paul Smith for advice and at amatheson@advanstar.com
www.chromatographyonline.com 7