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7423 CH 4
7423 CH 4
4.1 INTRODUCTION
59
• Nutrient run-off: residues of fertilizer and sewage get washed via rivers
into the sea and stimulate algal blooms that can become poisonous tides.
The result is local eutrophication and death of marine life due to a lack of
oxygen.
• Siltation: sediments from mining, construction, clearance of mangrove
swamps, clearance of wetlands and dredging add to natural siltation from
river flow, effectively burying coastal ecosystems, destroying coral reefs
and making the water too turbid to sustain marine life.
• Toxic waste: water and seafood are contaminated by discharges of
industrial waste, pesticides etc. Some toxins accumulate in the fat of
predators at the top of the food chain. Estrogen-like compounds, including
phyto-estrogens, may affect the hormonal balance causing infertility in
marine animals.
• Oil: runoff and spills damage marine life most prominently in coastal
areas, affecting fish, molluscs and seabirds.
• Plastics: a mass of plastic containers endanger marine life
Observing and sampling catches on board commercial vessels are widely used
methods of learning what quantities of fish are retained for landing and discarding.
According to Cotter et al.10, a quarterly catch sampling period is appropriate and
helps to isolate seasonal variations for target species, gear and movements of
vessels into and out of fishing areas. Detailed surveys of fish populations have
been carried out in English waters since 197011; these surveys continue to date.
Annual indices of fish abundance derived from these surveys are used to determine
information such as the size of stocks, size and location of nursery grounds,
presence of infrequent migratory species, diversity of the population, temperature
and salinity.
Collection and analysis of relevant data are essential for the creation of fisheries
management controls based on quotas or effort control as suggested by Shepherd12.
The collection of environmental data such as temperature and salinity enables
researchers to relate catch volume and species to specific environment conditions,
thereby generating information about the captured species’ habitats. In turn, this
should allow predictions of the probable location of commercially important
species, which should reduce time at sea and fishing effort costs. The maintenance
of a repository for this sort of data will make it possible to establish any
correlations between variations in capture volumes and changes in environmental
parameters.
It is well established that patterns of biological activity parallel those in the
physical environment13; accordingly any analysis of fisheries data should be
considered hand in hand with environmental factors. In the long term, it is proposed
that the onboard module be linked to a range of sensors and thus allow the system
to collect and archive all the data relevant to stock assessment.
• A single data entry function that is performed very soon after each fishing
operation is completed.
• Data is validated and verified resulting in more complete data records.
• Minimal data entry errors owing to interface design and automated data
collection.
• Reports produced in hard copy and/or transmitted in any of a number of
different ways including ship to shore, to the fisheries agency, or other
interested parties (such as the fishing company).
• Improvements in timeliness and accuracy, along with reductions in data
processing costs are possible. This is especially relevant for certain types
of data, namely catch volume, effort, location, environmental conditions
and type of gear.
• Records of the geographical co-ordinates of each catch and a history of
where the vessel was at each fishing event, thereby offering a basis for
planning future trips.
• Accurate data for use in decision support systems, leading to improved
fisheries management and control15.
The onboard module along with the analysis and vessel tracking modules has
the potential to play an essential role in providing information for the assessment of
fish stocks16,17, for compliance purposes and for the implementation of suitable
management practices. Although similar GIS have been developed18, they tend to
have limited scope, deal with one particular type of fishery and do not integrate a
data collection module. FishCAM on the other hand copes with many different
types of gear and fishing activities, has an integrated data collection module and GI
solutions for spatial decision support. Previous exploratory development work was
carried out by Kemp and Meaden19 and resulted in an early prototype of the
FishCAM system from which the fully-fledged system described in this chapter
emerged.
In the FishCAM system the commercial catch data set is generated and archived
by the onboard module and consists of fishing activity details captured in real time.
The catch data is dynamically geo and temporally referenced.
The georeferencing is carried out at a variety of customized spatial resolutions
depending upon the requirements for analysis and monitoring. For example, the
fishery catch data is georeferenced to the ICES (International Council for
Exploration of the Sea) statistical rectangles specified by the CFP. On the other
hand, the environmental data captured by marine biologists, using multiple
parameter sensors, are georeferenced at much finer spatial and temporal
resolutions. This provides the scientists with more accurate information for spatial
predictive modelling in the context of stock assessment and time series analyses.
The design of the diverse fisheries data sets is based on an extendable data model
that enables data fusion for flexible analysis of various fishery related activities.
For example, Figure 4.1 illustrates how environmental variables, sampled at set
research stations, may be merged with commercial catch data. The rigorous dataset
specifications support flexible data visualization allowing multiple views of the
same data and on demand mapping as well as a highly flexible ‘on-the-fly’ query
facility (Figure 4.2).
problems in creating complete tracks of a moving object is that if the data capture
fails there are segments of the track where positions are unknown. These missing
positions need to be estimated when the data capture method fails (e.g., in the case
of FishCAM when the GPS signal is unavailable). The interpolation technique
selected was a linear weighted distance or ‘straight line method’20 chosen for its
simplicity. The method assumes that the locations of the missing intermediate
track points are distance weighted averages of the data points occurring directly
before and directly after the mapped point. Equation 4.1 was used to interpolate the
location (xi, yi) of the intermediate point i at time ti, where location point a is the
point prior to the missing intermediary point i, and b is the location point directly
after the intermediary point i.
t -t
xi = xa + ( xb − xa ) i a
t b - ta
(4.1)
t -t
yi = y a + ( yb − y a ) i a
t - ta b
Figure 4.3 Plot of octopus fishing trip starting from port. The left inset picture is a photo of the fishing
gear being set and that on the right is an enlarged view of the key activity portion of the trip.
is too infrequent the shape of the track becomes oversimplified and therefore
inaccurate. An ideal sampling frequency during a typical haul is anywhere between
every two seconds to every five minutes.
Plotting the trajectory (Figure 4.3) can be, with some gears, used to estimate the
real length of the gear, in the case of a net (such as a purse seine), as well as the
fishing set duration. Plotting of time versus speed (derived from distance calculated
between two consecutive GPS positions) allows the determining of travel time,
seeking time, number and duration of fishing sets (Figure 4.4). As most vessels tow
gear at speeds between 1.5 and 3.2 knots21 it is possible to identify where the
vessels were undertaking trawling activities as opposed to just cruising.
Figure 4.4 Plot of gillnet fishing trip time versus ship speed. Position sampled at five minute intervals.
• Space
• Time
• Species
• Gear
• Statistical methodology (e.g., the Shannon-Wiener diversity index24)
The current standard resolution used by the International Council for the
Exploration of the Sea (ICES) for recording fishing effort and landings for stock
assessment purposes is 1° longitude x 0.5° latitude (an area of over 3,500 km2 at
55°N, see Figure 4.5). However fishing sets and fishing locations (like bivalve sea
beds) occur on a smaller scale. In the case of the Portuguese south coast, where the
FishCAM sea trials took place, the whole coast is covered by two ICES statistical
rectangles. This provides insufficient data for stock assessment or the use of
technical management measures such as closed areas21. Another problem with this
resolution is that fishing effort is often concentrated in areas of high catch resulting
in fairly localized impacts. Thus, for the results of fisheries research to be
applicable to the activities of commercial fleets there is a requirement for accurate
high-resolution spatial fisheries data25.
Figure 4.5 Examples of the different spatial resolutions required in fisheries analysis. Research
scientists use (upper left) latitude-longitude and (upper right) a 30’ x 30’ grid, while fishers and
authorities use (lower left) ICES statistical rectangles or (lower right) ICES divisions.
quotas at the coarser ICES division level, while fishers and researchers require finer
granularities. For example, Portuguese scientists work at three different levels on
finer grids of a half-mile and a quarter mile as well as at the point data level
provided by monitoring at fixed research stations. The fishers themselves also
require the ability to analyze their activities at various levels; they need quota
analysis at the ICES division level, landings and catch analysis at the ICES
statistical rectangle level (for EU log-sheets) and finer resolutions depending on the
type of fishing they are engaged in (e.g., dredging involves intensive fishing within
a very small area whereas gill nets cover large areas in a single haul).
In addition, there are variations in analytical needs. National monitoring
agencies hold huge archives of data and require analysis over large temporal
ranges, whereas scientists may wish to compare environmental factors with
abundance of a given species over a season or annually. Figures 4.6 and 4.7
provide examples of the types of analyses that can be conducted with FishCAM.
Figure 4.6 Lemon Sole research survey, abundance and environmental parameters at ICES statistical
rectangle resolution and for the same spatio-temporal region.
Figure 4.7 Shannon-Weiner diversity, samples collected at set research stations in the Algarve 2003.
One of the primary visualization challenges faced was how to represent spatio-
temporal change. Patterns of change in environmental parameters, abundance or
migration of a species are traditionally identified by viewing the data in a time-
space series26 (e.g., Figure 4.8).
Figure 4.8 Spatio-temporal change: Shannon-Wiener diversity index for Chamelea gallina in 2002 and
2003 graphed by research station.
The analysis model incorporates the ability to view multiple views of the same
data and hence assists the user in the recognition of spatial and temporal data trends
and anomalies18. Figure 4.9 illustrates the change in the distribution of lemon sole
between the first quarter and second quarter of a year. The distribution of lemon
sole moves west in the second quarter, but they stay abundant in the western
channel throughout the first half of the year.
Figure 4.9 Distribution of Lemon Sole catch by ICES rectangle and two time periods.
Figure 4.10 Selecting the rectangle 35F2: breakdown by species (right) of the catch for the selected
ICES statistical rectangle.
4.4 CONCLUSIONS
• The data models that support a GIS should, preferably, address the spatial,
temporal and thematic dimensions.
• The system should enable multiple user requirements to be addressed,
without undue effort on data fusion and interoperability for ad hoc
analyses.
Thus the modular design of FishCAM includes capabilities to collect and verify
data and to enable flexible extraction and display of different sets of fishery and
environmental data. This includes the means to examine different time periods and
temporal resolutions, areas and spatial resolutions, or species and gear
combinations, as well as the ability to alter symbolization and display formats.
Such an approach enables the industry as well as marine scientists to achieve a
better understanding of the trends in fishery harvests, fluctuations in stocks and, in
the longer term, supports an ecosystem-based approach to the exploitation of
marine resources.
4.5 ACKNOWLEDGMENTS
This project was funded by the EU: CRAFT project, Key Action No. 1.1.1 - 5:
Sustainable Agriculture, Fisheries and Forestry, Ref: Q5CR-2001-70746.
We would also like to thank: IPIMAR (Instituto de Investigação das Pescas e do
Mar), Centro Regional de Investigação Pesqueira do Sul, Avenida 5 de Outubro
s/n, P-8700-305, Olhão, Portugal, for the data from their 2002 and 2003 bivalve
research surveys in the Algarve; Miguel Gaspar and Pedro Lino for their helpful
suggestions during the development of the FishCAM software; and Geoff Meaden
in the Fisheries GIS Unit at Canterbury Christ Church University College,
Canterbury, UK, for his valuable input into the project with regards to the CFP and
EU logbook requirements.
4.6 REFERENCES
1.
European Commission, About the Common Fisheries Policy, http://ec.europa.eu/fisheries/cfp_en.htm,
2006.
2.
European Commission, Statistics on the CFP, http://ec.europa.eu/fisheries/cfp/statistics_cfp_en.htm,
2006.
3.
European Commission, Community Fisheries Control Agency, http://ec.europa.eu/fisheries/cfp/
control_enforcement/control_agency_en.htm, 2006.
4.
Fives, J.M., Acevedo, S., Lloves, M., Whitaker, A., Robinson, M., and King, P.A., The distribution
and abundance of larval mackerel Scomber scrombus L., horse mackerel, Tachurus trachurus (L.), hake,
Merluccius merluccius (L.), and blue whiting Micromesistius poutassou (Risso, 1826) in the Celtic Sea
and west of Ireland during the years 1986, 1989 and 1992, Fisheries Research, 50, 17-26, 2001.
5.
Buckley, R., Ed., World Fishing: Beyond Sustainability, UGI Ltd, Cheltenham, 2002.