Researchers analyzed over 77,000 genome sequences of SARS-CoV-2 and identified over 15,000 mutations. Four amino acid alterations were found near the receptor binding domain of the spike protein but their effects are unknown. The D614G alteration in the spike protein was found more frequently and is a marker for a major variant lineage. Studies found the G614 variant produced higher viral loads but no increased severity, and generated higher infectious titers in pseudovirus experiments, suggesting increased infectivity, though more validation is needed using wild-type viruses. Another marker mutation is involved in virus evolution but its significance requires further investigation.
Researchers analyzed over 77,000 genome sequences of SARS-CoV-2 and identified over 15,000 mutations. Four amino acid alterations were found near the receptor binding domain of the spike protein but their effects are unknown. The D614G alteration in the spike protein was found more frequently and is a marker for a major variant lineage. Studies found the G614 variant produced higher viral loads but no increased severity, and generated higher infectious titers in pseudovirus experiments, suggesting increased infectivity, though more validation is needed using wild-type viruses. Another marker mutation is involved in virus evolution but its significance requires further investigation.
Researchers analyzed over 77,000 genome sequences of SARS-CoV-2 and identified over 15,000 mutations. Four amino acid alterations were found near the receptor binding domain of the spike protein but their effects are unknown. The D614G alteration in the spike protein was found more frequently and is a marker for a major variant lineage. Studies found the G614 variant produced higher viral loads but no increased severity, and generated higher infectious titers in pseudovirus experiments, suggesting increased infectivity, though more validation is needed using wild-type viruses. Another marker mutation is involved in virus evolution but its significance requires further investigation.
To assess the genetic variation of different SARSCoV-2 strains, the 2019 Novel
Coronavirus Resource of China National Center for Bioinformation aligned 77,801
genome sequences of SARS-CoV-2 detected globally and identified a total of 15,018 mutations, including 14,824 single-nucleotide polymorphisms (BIGD)31. In the S protein, four amino acid alterations, V483A, L4551, F456V and G476S, are located near the binding interface in the RBD, but their effects on binding to the host receptor are unknown. The alteration D614G in the S1 subunit was found far more frequently than other S variant sites, and it is the marker of a major subclade of SARS-CoV-2 (clade G). Since March 2020, SARS-CoV-2 variants with G614 in the S protein have replaced the original D614 variants and become the dominant form circulating globally. Compared with the D614 variant, higher viral loads were found in patients infected with the G614 variant, but clinical data suggested no significant link between the D614G alteration and disease severity32. Pseudotyped viruses carrying the S protein with G614 generated higher infectious titres than viruses carrying the S protein with D614, suggesting the alteration may have increased the infectivity of SARS-CoV-2 (REF.32). However, the results of in vitro experiments based on pseudovirus models may not exactly reflect natural infection. This preliminary finding should be validated by more studies using wild-type SARS-CoV-2 variants to infect different target cells and animal models. Whether this amino acid change enhanced virus transmissibility is also to be determined. Another marker mutation for SARS-CoV-2 evolution is the single-nucleotide