PROTEIN

LANGUAGE
MODELS
An Insight

Harshatha N Reddy
22L10905
PLMs ?..
 PURPOSE OF PLMs
➢ Prediction of Protein Structures
➢ Protein Function Prediction
➢ Protein Engineering and Design
➢ Annotation of Uncharacterized Proteins
➢ Exploration of Protein-Protein Interactions
➢ Analysis of Large-Scale Protein Datasets
➢ Integration of Multiple Data Sources
➢ Accelerating Research and Drug Discovery
EXAMPLES OF PLMs
➢ UniRep
➢ ProtTrans
➢ proteinBERT
➢ AbLang
➢ TAPE (The Amino Acid Property Evaluator)
➢ Alphafold
WORKING OF PLMs
WORKING contd….
A TIMELINE ALWAYS
WORKS WELL

Jupiter is the Venus has a

DAY 1 biggest planet DAY 3 nice name

Earth is where DAY 2 Mars is a cold DAY 4

we live on place
DO YOU PREFER THIS
GRAPH?

Factor 1

Factor 2

To modify this graph,

click on it, follow the
link, change the data
and replace it
300,000
Big numbers catch your
audience’s attention
SOMETIMES, COMPARISONS
ARE GOOD

CONCEPT 1 CONCEPT 2

● You can define one of the
concepts here
● You can define one of the
concepts here
● You can define one of the
concepts here
● You can define one of the
concepts here
● You can define one of the
concepts here
● You can define one of the
concepts here
DO YOU NEED FOUR
COLUMNS?

MARS MERCURY JUPITER VENUS

Despite being Mercury is the It is the biggest Venus has a
red, Mars is a closest planet to planet in the beautiful name,
cold place the Sun Solar System but it’s hot
 333,000
Mercury is the smallest planet

245,00
Jupiter is the biggest planet

386,000
Despite being red, Mars is cold
THESE ARE THE
PERCENTAGES!

18%
48%
Jupiter is the
biggest one

Mercury is the
34% smallest planet

Mars is a cold
place
REVIEWING CONCEPTS IS
A GOOD IDEA

MERCURY VENUS MARS

Mercury is the Venus has a Mars is actually a
smallest planet beautiful name cold place

JUPITER SATURN NEPTUNE

It’s a gas giant and Saturn is the ringed It’s the farthest
the biggest one one and a gas giant planet from the Sun
A SUMMARY IS
GOOD! ● You can write about a concept
here and talk about it a little
● You can write about a concept
here and talk about it a little
You can use bullet points
to talk about the ● You can write about a concept
concepts. It is much more here and talk about it a little
visual than a large text ● You can write about a concept
here and talk about it a little
● You can write about a concept
here and talk about it a little
● You can write about a concept
here and talk about it a little
WHAT THEY SAY ABOUT US?

“Mercury is the closest “Jupiter is the biggest

planet to the Sun” planet of them all”
—SARA BLACK, 19 —HELENA PATTERSON, 22

“Despite being red, Mars “Venus has a beautiful

is actually a cold place” name, but it’s hot”
—JOHN DOE, 31 —WILL WHITMAN
DESKTOP SOFTWARE

You can replace the

image on the screen
with your own work.
Just delete this one,
add yours and
center it properly
TABLET APP

You can replace the

image on the screen
with your own work.
Just delete this one,
add yours and
center it properly
A GOOD WAY TO END THE
PRESENTATION

Mercury is the closest planet to the

Sun and the smallest one in the
Solar System—it’s only a bit larger
than the Moon