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Synthesis and Antimicrobial Activities Evaluation of Some New Thiadiazinone and Thiadiazepinone Derivatives Bearing Sulfonamide Moiety
Synthesis and Antimicrobial Activities Evaluation of Some New Thiadiazinone and Thiadiazepinone Derivatives Bearing Sulfonamide Moiety
ABSTRACT
A new series of novel functionalized 1,3,4-thiadiazin-5-ones and 1,3,4-thiadiazepin-5-ones bearing
sulfonamide moieties by 1,3-dipolar cyclocondensation reaction of nitrilimines with α-mercaptoesters and
mercaptosuccinic acid respectively. The structures of the newly prepared compounds were elucidated by
spectral methods (IR,1H-NMR,13C-NMR and MS spectroscopy) and elemental analysis. The newly
synthesized compounds were screened for their in vitro antimicrobial activity. Some of titled compounds
exhibited significant antimicrobial activity on several strains of microbes.
with α-mercaptoesters and mercaptosuccinic thiazole), 7.93-7.04 (m, 9H, Ar-H), 6.64 (d,
acid in anticipation of expected interesting 1H,J = 4.5 Hz, thiazole), 4.25-4.12 (q, 2H,
biological activities. OCH2), 3.95 (s, 2H, SCH2), 1.28-1.15 (t, 3H,
CH3) ppm. 13C NMR (DMSO-d6): δ = 170.1
EXPERIMENTAL SECTION (ester C=O), 159.4 (amide C=O), 141.7 (C=N),
Instruments and Reagents 167.9-119.3 (Ar-C and thiazole-C), 61.3
(OCH2), 33.2 (SCH2), 13.9 (CH3) ppm. MS: m/z
Melting points were determined using an electro
= 519 [M+.]. Anal. Calcd. for C21H21N5O5S3
thermal melting temperature apparatus and are
(519.62): C, 48.54; H, 4.07; N, 13.48; Found C
uncorrected. The IR spectra were measured as
48.31; H, 3.98; N, 13.60.
KBr pellets using a Satellite 3000 Mid infrared
spectrometer. 1H NMR and 13C NMR spectra Ethyl 4-phenylaminocarbonyl-6-[4-(pyrimidin-
were recorded on a Bruker AM 300 MHz 2-yl-sulfamoyl)phenyl]-3,5,6-thiadiaza-4-
spectrometer at r. t. in DMSO-d6 solution u sing hexenoate (3b). M.p. 236-238 ◦C (ethanol).
tetramethylsilane (TMS) as internal reference. Yield 75%. IR: ν =3358, 3348, 3270 (NH), 1715
Chemical shifts are expressed in δ (ppm) (ester C=O), 1655 (amide C=O), 1595 (C=N),
downfield from TMS and coupling constants are 1230 (C–S), 1139 (S=O) cm−1. 1H NMR
in Hertz (Hz). Electron impact (EI) mass spectra (DMSO-d6): δ = 12.65 (s, 1H, SO2NH), 10.64
were run on a Shimadzu GCMS-QP1000 EX (s, 1H, N-NH), 9.93 (s, 1H, PhNH), 8.84 (d, 2H,
spectrometer at 70 eV. Elemental analysis were J = 8.8 Hz, pyrimidine ring), 8.02-7.07 (m, 9H,
carried out at micro analytical laboratory, Cairo Ar-H), 6.86 (t, 1H, J = 7.5 Hz, pyrimidine ring),
University, Cairo, Egypt. Ethyl mercapto 4.23-4.12 (q, 2H, OCH2), 3.96 (s, 2H, SCH2),
acetate, mercaptosuccinic acid, triethylamine 1.27-1.16 (t, 3H, CH3) ppm. 13C NMR (DMSO-
(TEA), tetrahydrofuran (THF), di cyclo d6): δ = 170.8 (ester C=O), 159.9 (amide C=O),
hexylcarbodiimide (DCC) and 1,4-dioxane were 141.2 (C=N), 168.2-113.8 (Ar-C and
purchased from Avocado Research Chemicals, pyrimidine-C), 61.8 (OCH2), 34.2 (SCH2), 14.1
England, and used without further purification. (CH3) ppm. MS: m/z = 514 [M+.]. Anal. Calcd.
Hydrazonoyl chlorides 1a-c employed in this for C22H22N6O5S2 (514.59): C, 51.35; H, 4.31;
study, were prepared via direct coupling of the N, 16.33; Found C, 51.58; H, 4.45; N, 16.22.
appropriate sulfa drug diazonium chloride with Ethyl 4 - phenylaminocarbonyl - 6- [4- (5-
α-chloroacetoacetanilide in sodium acetate/ methyloxazol – 3 – yl - sulfamoyl) phenyl]-3,5,6-
ethanol solution following standard procedures thiadi-aza-4-hexenoate (3c.) M.p. 218-220 ◦C
[50].
(ethanol). Yield 73 %. IR: ν = 3372, 3343, 3270
General Procedure For Synthesis of 3, 5,6- (N–H), 1712 (ester C=O), 1650 (amide C=O),
Thiadiaza-4-Hexenoates 3a-c. 1598 (C=N), 1226 (C–S), 1138 (S=O) cm−1. 1H
NMR (DMSO-d6): δ = 12.62 (s, 1H, SO2NH),
To a stirred solution of the appropriate
10.46 (s, 1H, N-NH), 9.95 (s, 1H, PhNH), 7.88-
hydrazonoyl halide 1 (10 mmol) and ethyl
7.06 (m, 9H, Ar-H), 6.24 (s, 1H, oxazole ring),
mercaptoacetate (15 mmol) in tetrahydrofuran
4.13-4.01 (q, 2H, OCH2), 3.89 (s, 2H, SCH2),
(THF) (50 mL), triethylamine (5 mmol) in THF
2.38 (s, 3H, CH3 on oxazole ring), 1.25-1.13 (t,
(10 mL) was drop wise added at r. t. Stirring
3H, CH3) ppm. 13C NMR (DMSO-d6): δ = 170.4
was continued for 72 hr, then the solvent was
(ester C=O), 159.4 (amide C=O), 141.5 (C=N),
removed under vacuum, and the residual solid
167.4-115.4 (Ar-C and oxazole-C), 61.3
was washed with water (100 mL). The solid
(OCH2), 33.5 (SCH2), 13.8 (CH3), 12.40 (CH3
products were collected and recrystallized from
oxazole) ppm. MS: m/z = 517 [M+.]. Anal.
an appropriate solvent to afford the desired
Calcd. for C22H23N5O6S2 (517.59): C, 51.05; H,
compounds. The following compounds were
4.48; N, 13.53; Found C, 50.82; H, 4.60; N,
prepared by this method.
13.65.
Ethyl 4-phenylaminocarbonyl-6-[4-(thiazol-2-yl-
Cyclization of Compounds 3a-C To 1, 3,4-
sulfamoyl)phenyl]-3,5,6-thiadiaza-4-hexenoate
Thiadiazin-5-Ones 4a-c
(3a). M.p. 213-215 ◦C (ethanol). Yield 76 %.
IR: ν = 3365, 3346, 3270 (NH), 1718 (ester Method A:Compounds 3a-c (5 mmol) were
C=O), 1650 (amide C=O), 1597 (C=N), 1225 added to a methanolic solution of sodium
(C–S), 1150 (S=O) cm−1. 1H NMR (DMSO-d6): methoxide -prepared from sodium metal (0.12 g,
δ = 12.70 (s, 1H, SO2NH), 10.65 (s, 1H, NH), 5 mmol) and methanol (20 mL)- under stirring
9.96 (s, 1H, PhNH), 8.74 (d, 1H,J = 9.2 Hz, at r. t. The resulting solution was refluxed for 2-
3 h. After cooling the solvent was removed 1645 (amide C=O), 1612 (C=N), 1153 (S=O),
under reduced pressure, and the residue was 682 (C-S) cm−1. 1H NMR (DMSO-d6): δ = 11.58
washed with water. The solid was collected and (s, 1H, SO2NH), 10.13 (s, 1H, PhNH), 7.78-7.10
recrystallized from ethanol to give the desired (m, 9H, Ar-H), 6.34 (s, 1H, oxazole ring), 3.92
1,3,4-thiadi-azinones 4a-c. (s, 2H, CH2), 2.35 (s, 3H, CH3) ppm. 13C NMR
Method B: To a stirred solution of compounds (DMSO-d6): δ = 160.8 (lactam C=O), 158.6
3a-c (5 mmol) in dry THF (30 mL) was (amide C=O), 143.4 (C=N), 166.9-115.6 (Ar-C
carefully added lithium hydride (0.08 g, 10 and oxazole-C), 26.3 (CH2), 12.4 (CH3). ppm.
mmol) at r. t. The resulting reaction mixture was MS: m/z = 471 [M]+. Anal. Calcd. for
refluxed for 30 min. After cooling excess C20H17N5O5S2 (471.52): C, 50.95; H, 3.63; N,
lithium hydride was destroyed with some drops 14.85; Found C, 51.15; H, 3.52; N, 14.97.
of glacial acetic acid. The solvent was Synthesis of Compounds 5a-C (General
evaporated under reduced pressure and the Procedure)
product extracted three times with chloroform.
Reaction of nitrilimines with mercaptosuccinic
The combined organic extracts were dried over
acid: To a mixture of the appropriate hydrazonoyl
anhydrous magnesium sulfate, and the solvent halide 1a-c (0.01 mol) and mercaptosuccinic acid
was removed under reduced pressure. The (7.50 g, 0.05 mol) in dry tetrahydrofuran or 1,4-
resulting solid product was collected and dioxane (100 mL), triethylamine (5 mL, 0.05 mol)
recrystallized from ethanol to give compounds was added at room temperature and the reaction
4a-c that were identical with the ones prepared mixture was controlled by TLC. The stirring
by method A. continued until the starting substrates were
2-phenylaminocarbonyl-4-[4-(thizol-2-yl- completely consumed (4-6 days). The
sulfamoyl)phenyl]-6H-1,3,4-thiadiazin-5-one triethylammonium chloride salt was filtered off,
(4a). M. p. 251-253 ◦C (ethanol). Yield 73 %. IR: ν =
the solvent was removed under reduced pressure
3365, 3273 (NH), 1678 (lactam C=O), 1650 (amide and the residue was partitioned between ethyl
C=O), 1610 (C=N), 1149 (S=O), 684 (C-S) cm−1. 1H acetate and water. The aqueous layer was
NMR (DMSO-d6): δ = 11.61 (s, 1H, SO2NH), 10.12 extracted with ethyl acetate, and the combined
(s, 1H, PhN–H), 8.76 (d, 1H, J = 9.1 Hz, thiazole), organic layers were extracted with saturated
7.87-7.03 (m, 9H, Ar-H), 6.63 (d, 1H J = 4.5 Hz, NaHCO3 solution, washed twice with brine and
thiazole), 3.90 (s, 2H, CH2) ppm. 13C NMR (DMSO- dried over MgSO4. The solvent was evaporated in
d6): δ = 161.5 (lactam C=O), 158.5 (amide C=O), vacuo and the residue was treated with ethanol,
143.3 (C=N), 166.7-119.2 (Ar-C and thiazole-C), whereby 5a-c could be isolated by slow
26.2 (CH2) ppm. MS: m/z = 473 [M]+. Anal. Calcd. evaporation, or immediately cyclized to 6,7.
for C19H15N5O4S3 (473.55): C, 48.19; H, 3.19; N,
The Following Compounds Were Prepared
14.79; Found C, 48.41; H, 3.30; N, 14.67.
Using This Method:
2-phenylaminocarbonyl-4-[4-(pyrimidin-2-yl-
sulfamoyl)phenyl]-6H-1,3,4-thiadiazin-5-one (4b). 2-{2-Anilino-2-oxoethanehydrazonoyl-N-[4-
M. p. 241-243 ◦C (ethanol). Yield 72 %. IR: ν = (thiazol-2-yl-sulfamoyl)phenyl]}thiosuccinic
3375, 3273 (NH), 1680 (lactam C=O), 1640 (amide acid (5a).White solid, yield 73%, mp 216-218oC,
C=O), 1615 (C=N), 1170 (S=O), 683 (C-S) cm−1. 1H
1
H NMR (DMSO-d6) δ: 3.66 (d, 2H, J = 6.7 Hz,
NMR (DMSO-d6): δ = 11.60 (s, 1H, SO2NH), 10.14 CH2 ), 3.76 (t, 1H, J = 6.7 Hz, CH), 6.64 (d, 1H,J
(s, 1H, PhNH), 8.86 (d, 2H, J = 8.8 Hz, pyrimidine), = 4.5 Hz, thiazole), 7.24-8.22 (m, 9H, Ar-CH),
7.97-7.11 (m, 9H, Ar-H), 6.89 (t, 1H, J = 7.5 Hz, 8.78 (d, 1H, J = 9.2 Hz, thiazole), 9.86 (NH
pyrimidine), 3.91 (s, 2H, CH2) ppm. 13C NMR anilino), 10.52 (s, 1H, ArNH),12.70 (s, 1H,
(DMSO-d6): δ = 162.2 (lactam C=O), 159.5 (amide SO2NH).13C NMR (DMSO-d6) δ: 39.7 (CH2),
C=O), 143.6 (C=N), 167.9-110.3 (Ar-C and 42.3 (CH), 125.2-141.6 (Ar-C), 145.9 (C=N),
pyrimidine-C), 26.6 (CH2) ppm. MS: m/z = 468 [M]+. 159.6 (C=O amide), 171.8, 172.5 (COOH). IR
Anal. Calcd. for C20H16N6O4S2 (468.52): C, 51.27; H, (KBr) v/cm-1: 1237 (C-S), 1621 (C=N), 1654
3.44; N, 17.94; Found C, 51.46; H, 3.35; N, (C=O amide), 1723, 1734 (C=O), 2539, 3240
18.05. (OH), 3265, 3347 (NH). MS, (m/z): 549 [M]+.
Analysis (% Calculated / found) for
2-phenylaminocarbonyl-4-[4-(5-methyloxazol-
C21H19N5O7S3 (Mw 549.61) C: 45.89/46.15, H:
3-yl-sulfamoyl)phenyl]-6H-1,3,4-thiadi-azin-5-
3.48/3.62, N: 12.74/12.63.
one (4c). M. p. 232-234 ◦C (ethanol). Yield 71
%. IR: ν =3382, 3272 (NH), 1675 (lactam C=O),
(s, 1H, SO2NH). 13C NMR (DMSO-d6) δ: 24.7 (PhNH), 11.90 (s, 1H, SO2NH). 13C NMR
(CH3), 31.9 (CH2) 36.8 (CH), 126.6-139.7 (Ar- (DMSO-d6) δ: 31.4 (CH2), 36.7 (CH), 126.6-
C), 144.3 (C=N), 160.5 (C=O ring), 171.4 139.7 (Ar-C), 144.4 (C=N), 160.8 (C=O ring),
(COOH), 193.6 (CH3C=O),. IR (KBr) v/cm-1: 171.3 (COOH), 176.2 (RC=O). IR (KBr) v/cm-1:
1208 (C-S), 1624 (C=N), 1692 (RC=O), 1723 1208 (C-S), 1624 (C=N), 1660 (RC=O), 1723
(C=O), 2560-3210 (OH). MS, (m/z ): 531 [M]+. (C=O), 2530-3235 (OH). MS, (m/z ): 529 [M]+.
Analysis (% Calculated/found) for Analysis (% Calculated/found) for
C21H17N5O6S3 (Mw 531.59) C: 47.45/47.65, H: C22H19N5O7S2 (Mw 529.55) C: 49.90/50.15, H:
3.22/3.35, N: 13.17/13.30. 3.62/3.55, N: 13.22/13.35.
5-Oxo-2-phenylaminocarbonyl-4-[4-(pyrimidin- Antimicrobial Activity Screening
2-yl-sulfamoyl)phenyl]-4,5,6,7-tetra-hydro- Antimicrobial activity screening of the
1,3,4-thiadiazepine-7-carboxylic synthesized compounds was determined by the
acid(7b).Yellow solid, yield 56%, mp 279-281 agar dilution technique as recommended by the
o
C, 1H NMR (DMSO-d6) δ: 3.46 (d, 2H, J = 6.9 Clinical and Laboratory Standard Institute
Hz, CH2 ), 4.66 (t, 1H, J = 6.9 Hz, CH), 6.85 (d, (CLSI) [51]. The tested compounds were
1H, J = 7.5 Hz, pyrimidine), 7.14-7.98 (m, 9H, dissolved in dimethyl sulfoxide (DMSO). An
Ar-CH), 8.86 (d, 2H, J = 8.8 Hz, pyrimidine), inoculum of about 1.5 x 108 colony forming unit
9.87 (PhNH), 11.78 (s, 1H, SO2NH). 13C NMR per spot was applied to the surfaces of Mueller–
(DMSO-d6) δ: 31.7 (CH2), 36.6 (CH), 126.6- Hinton agar plates containing graded
139.7 (Ar-C), 144.7 (C=N), 160.8 (C=O ring), concentrations of the respective compound;
171.4 (COOH), 187.6 (CH3C=O). IR (KBr) plates were incubated at 37 oC for 18 h. All
v/cm-1: 1208 (C-S), 1624 (C=N), 1665 (RC=O), organisms used in this study were standard
1723 (C=O), 2520-3230 (OH),. MS, (m/z ): 526 strains were obtained from the Microbiology
[M]+. Analysis (% Calculated/ found) for laboratory (Al-Aqsa University) and included
C22H18N6O6S2 (Mw 526.55) C: 50.18/49.90, H: bacterial strain such as Enterococci, Escherichia
3.45/3.55, N: 15.96/16.11. coli, Staphylococcus aureus, Klebsiella spp,
4-[5-(Methyloxazol-3-yl-sulfamoyl)phenyl]-5- Proteus spp, and fungi strain such as Aspergillus
oxo-2-phenylaminocarbonyl-4,5,6,7-tetra- niger, Candida albicans. The MIC of
hydro-1,3,4-thiadiaze-pine-7-carboxylic Tetracycline and fluconazole was determined
acid(7c).White solid, yield 53%, mp 254-256 concurrently as reference for antibacterial and
o
C, 1H NMR (DMSO-d6) δ: 2.35 (s, 3H, CH3 of antifungal activities, respectively (Table 1).
oxazole), 3.48 (d, 2H, J = 6.9 Hz, CH2 ),4.61 (t, Control DMSO was carried out with each
1H, J = 6.9 Hz, CH), 6.21 (s, 1H, oxazole experiment.
proton), 7.07-7.84 (m, 9H, Ar-CH), 9.88
Table1. Antimicrobial screening results of the tested compounds*
preparation of various thia-aza hetero cycles. are found to react readily with ethyl
The reactive nitrilimines are found to react with mercaptoacetate for 3-4 days at room
2-sulfanyl alkanoic acids or ethyl temperature gave acyclic electrophilic addition
sulfanylacetate yielding acyclic adducts (4- products (3,5,6-thiadiaza-4-hexenoates) 3a-c
arylhydrazono-5-oxo-3-thiahexanoic acid or (Scheme 1). Cyclization to the corresponding
ethyl6-aryl-4-aroyl-3,5,6-thiadiaza-4-hexenoate) 1,3,4-thiadiazin-5-ones 4a-c did not observed.
which underwent cyclization to 1,3,4- The 3,5,6-thiadiaza-4-hexenoates 3a-c were
thiadiazinone ringsin the presence of cyclized intramolecularly to the corresponding
dicyclohexylcarbodiimide (DCC) or lithium 2,4-disubstituted 1,3,4-thiadiazin-5-ones 4a-c by
hydride, or methanolic sodium methoxide [52]. heating them with methanolic sodium
In the present study, the nitrilimines 2a-c having methoxide (NaOMe) or lithium hydride (LiH)
sulfonamide moieties were generated in situ (Scheme 1).
from the respective hydrazonoyl chlorides 1a-c,
Ar
O Ar
O N N
NEt3 N Ar O N NH
H R N- THF, r.t
0 oC +
R Cl(Br) 3-4 days COOEt
2
R S
1 +
HS COOEt 3a-c
R = PhNH- NaOMe or
LiH, Reflux
Ar = SO2NH-X
Ar
O N N
N N N O
a; X = b; X = c; X = O
S N R S
4a-c
Scheme1. Synthetic pathway for the preparation of compounds 3a-c and 4a-c.
Ar
O Ar
O N N
NEt 3 N Ar O N NH
H N- THF, r.t
0 oC
R +
R Cl(Br) 4-6 days COOY
2
+ R S
1 HS COOH COOH
5a-c
DCC/THF
COOH
Reflux
R = PhNH- Ar
Ar
O N N O O N N
Ar = SO2NH-X O
+
R S R S
COOH
7a-c COOH 6a-c
N N N O
a; X = b; X = c; X =
S N
Similarly, the mercaptosuccinic acid reacts with addition products 5a-c (Scheme 2). Acyclic
reactive nitrilimines 2a-c for 4-6 days at room adducts 5a-c underwent cyclization upon
temperature yielding acyclic electrophilic loosing water molecule, to the corresponding (4-
44 Open Access Journal of Chemistry V1● 11 ● 2017
Synthesis and Antimicrobial Activities Evaluation of Some New Thiadiazinone and Thiadiazepinone
Derivatives Bearing Sulfonamide Moiety
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