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Adrenergic Nerve Degeneration in Bone Marrow Drives Aging of The Hematopoietic Stem Cell Niche
Adrenergic Nerve Degeneration in Bone Marrow Drives Aging of The Hematopoietic Stem Cell Niche
https://doi.org/10.1038/s41591-018-0030-x
Noboru Asada1,2,6, Qiaozhi Wei1,2, Xizhe Wang1,2, Paul Ciero1,2, Jianing Xu4, Avigdor Leftin5 and
Paul S. Frenette 1,2,3*
Aging of hematopoietic stem cells (HSCs) is associated with a decline in their regenerative capacity and multilineage differen-
tiation potential, contributing to the development of blood disorders. The bone marrow microenvironment has recently been
suggested to influence HSC aging, but the underlying mechanisms remain largely unknown. Here we show that HSC aging criti-
cally depends on bone marrow innervation by the sympathetic nervous system (SNS), as loss of SNS nerves or adrenoreceptor
β3 signaling in the bone marrow microenvironment of young mice led to premature HSC aging, as evidenced by appearance of
HSC phenotypes reminiscent of physiological aging. Strikingly, supplementation of a sympathomimetic acting selectively on
adrenoreceptor β3 to old mice significantly rejuvenated the in vivo function of aged HSCs, suggesting that the preservation or
restitution of bone marrow SNS innervation during aging may hold the potential for new HSC rejuvenation strategies.
M
ammalian aging can be described as a time-dependent neurotransmitter into the microenvironment in a circadian
functional decline in the physiologic homeostasis of many manner30–32. These autonomic signals regulate the proliferative
tissues, leading to increased risk of cardiovascular dis- state of Nestin-GFP+ MSCs, HSC mobilization, and the hema-
eases, neurodegenerative diseases, cancer, and diabetes1. One of topoietic regenerative capacity following genotoxic stress33–35.
the major causes of age-associated tissue attrition is a functional Here we have evaluated the impact of aging on the bone marrow
decline in tissue-specific stem cells2. In the hematopoietic system, microenvironment and have found, unexpectedly, that the loss of
lifelong blood production depends on the ability of HSCs to self- sympathetic nerve fibers around arteriolar niches was a potent
renew, differentiate, and form all blood cell lineages3. Aging of the driver of hematopoietic aging.
blood system is associated with myeloproliferation, immune senes-
cence, and anemia, attributed to age-dependent decline in HSC Results
function due to loss of regenerative potential and myeloid-biased Aging-related alterations of HSC niches. To define how aging
differentiation4. Studies have identified multiple HSC intrinsic fac- impacts HSC niches, we compared the bone marrow (BM) vascu-
tors that regulate their aging. Among these are mechanisms con- lar architecture by whole-mount three-dimensional confocal fluo-
trolling HSC metabolism (autophagy, mitochondrial dysfunction, rescence imaging24 of young (8- to 10-week-old) and old (20- to
and nutrient sensing)5–9, replicative stress10, and DNA damage and 24-month-old) C57BL/6 mice and Nestin-GFP mice, in which GFP
repair responses11–14. It has also been suggested that alterations in marks putative HSC niche cells23. Nestin-GFP+ niche cells can be
the epigenetic landscape and cell polarity may drive HSC aging divided into two distinct subpopulations based on GFP expression:
manifestations14–16. Recent studies indicate that aging is also associ- Nestin-GFPbright cells are exclusively found along arteries, while the
ated with drastic changes to the bone marrow microenvironment more abundant Nestin-GFPdim population is largely associated with
and suggest that factors extrinsic to HSCs may promote their aged sinusoids24. Consistent with a recent study describing aging-related
phenotype17–21. alterations in BM17, we found that aging imposed drastic remodel-
HSCs reside in a specialized microenvironment in the bone ing of BM vascular architecture (Fig. 1a), as evidenced by an overall
marrow (also referred to as a niche), which represents a critical increase in vascular density (Fig. 1b) and apparent deterioration of
regulatory unit essential to maintaining healthy hematopoiesis22. arteriolar structures marked by significant shortening of Nestin-
HSC niches have recently been identified as perivascular units22 GFPbright arteriole segments (Fig. 1c) and loss of α-smooth muscle
where subsets of quiescent HSCs are closely associated with arte- actin-positive (α-SMA+) cell density (Fig. 1d). FACS analyses con-
riolar perivascular Nestin-GFP+ mesenchymal stem cells (MSCs), firmed the imaging results and revealed that the absolute number
glial fibrillary acidic protein (GFAP)-expressing Schwann cells of CD45−Ter119−CD31high total endothelial cells (ECs) were signifi-
from adrenergic nerves, and megakaryocytes17,23–29. The sympa- cantly increased (P <0.0001) while CD45−Ter119−CD31highSca-1high
thetic nervous system (SNS) represents an important regulatory arteriolar ECs were reduced (P <0.0001) in aged mice compared to
component of the HSC niche, orchestrating release of adrenergic young BM counterparts (Supplementary Fig. 1a).
1
Ruth L. and David S. Gottesman Institute for Stem Cell and Regenerative Medicine Research, Albert Einstein College of Medicine, New York, NY,
USA. 2Department of Cell Biology, Albert Einstein College of Medicine, Bronx, New York, NY, USA. 3Department of Medicine, Albert Einstein College
of Medicine, Bronx, New York, NY, USA. 4Human Oncology and Pathogenesis Program, Memorial Sloan Kettering Cancer Center, New York, NY, USA.
5
Department of Medical Physics, Memorial Sloan Kettering Cancer Center, New York, NY, USA. 6Present address: Okayama University Hospital,
Department of Hematology and Oncology, Okayama, Japan. 7These authors contributed equally: Ali H. Zahalka, Halley Pierce.
*e-mail: paul.frenette@einstein.yu.edu
© 2018 Nature America Inc., part of Springer Nature. All rights reserved.
Nature Medicine Articles
a Young Old
Ratio of Nes-GFPbright
P = 0.0016 P = 0.008 P = 0.0009
P = 0.0018
Ratio of α-SMA+
area/femur area
area/femur area
area/femur area
0.3 300 0.015
arteriole (μm)
Nes-GFPbright
0.008
0.2 200 0.010
0.004
0.1 100 0.005
f Gated on live g
CD45– Ter119– CD31–
250,000
Young Old
Young Young
200,000 Nes-GFPbright 50
0.0046% 0.06 Old
150,000
Nes-GFPbright cells (%)
P = 0.02
100,000 0.05 40
Percent HSCs
P = 0.0047
50,000
0.04 30
1,000 CD31 CD144 CD150
3 3 4
–10 0 10 10 10
5
0.03 Lineage CD48 CD41
250,000 20
Old 0.02
200,000 Nes-GFPbright 10
150,000 0.044% 0.01
100,000 0.00 0
SSC-A
0
00
20
40
60
80
00
20
–2
–4
–6
–8
–1
–1
–1
–1
–1
–2
–2
1,000
3 3 4 5
–10 0 10 10 10
Distance from arteriole (μm)
Nes-GFP
Fig. 1 | Aging induces remodeling of the HSC niche. a, Representative confocal z-stack projection montages of femurs from young (2 months) and old
(20–24 months) Nestin-GFP mice stained for double-positive CD31+CD144+ vasculature and α-SMA+ cells with anti-CD31, anti-CD144, and anti-α-SMA
antibodies. Scale bars, 500 µm for montages and 100 µm for zoomed projections; three independent experiments yielded similar results. b, Vascular
density in young and old mice, as assessed by quantification of CD31+CD144+ double-positive vascular area divided by total femur area (n =9 and 17
projections in young and old mice, respectively; 4 mice per group). c, Arteriolar segment length in femurs of young and old Nestin-GFP mice, as assessed
by quantification of the length of the Nestin-GFPbright signal covering CD31+CD144+ double-positive arterioles (n =11 and 6 projections in young and old
mice, respectively; 4 mice per group). d, α-SMA+ cell density in young and old mice, as assessed by quantification of α-SMA+ area divided by total femur
area (1 projection per mouse in young (n =6) and old (n = 3) mice). e, Nestin-GFPbright density in young and old mice, as assessed by quantification of
Nestin-GFPbright area divided by total femur area (n =9 and 17 projections in young and old mice, respectively; 4 mice per group) f, Left: representative
FACS plots of CD45−Ter119−CD31−Nestin-GFPbright MSCs isolated from young (top) and old (bottom) Nestin-GFP mice. SCC-A, side-scatter area. Gates and
percentages represent frequency of Nestin-GFPbright MSC population. Right: the frequency of Nestin-GFPbright MSCs from young and old Nestin-GFP mice
(n =3 young and 4 old mice). g, Representative whole-mount projections (inset) and quantification of the distribution of Lin−CD41−CD48−CD150+
phenotypic HSCs in the sternal BM relative to Nestin-GFPbrightCD31+CD144+ double-positive arterioles in young and old C57BL/6 mice (n = 47 young
HSCs; 148 old HSCs; 3 mice per group; two-sample Kolmogorov–Smirnov test, P =0.0047). Arrows denote HSCs. Scale bar, 100 µm. Data represented as
mean ± s.e.m.; P value determined by two-tailed t test unless otherwise indicated.
Imaging of the rare Nestin-GFPbright population revealed a sig- megakaryocytes24,26,27,36. To assess the relationship between HSCs
nificant expansion of these cells in old femurs (Fig. 1e), which with niche structures during aging, we imaged endogenous
was further confirmed by FACS analysis, demonstrating a specific CD150+CD48−CD41−Lin− HSCs in whole-mount sterna from
expansion of Nestin-GFPbright cells with age, without significant young and old mice. We found that HSCs in old mice were dis-
changes in the sinusoidal Nestin-GFPdim population (Fig. 1f and tributed significantly away from either niche structure compared
Supplementary Fig. 1b). Notably, expanded niche cells were distrib- to young animals (Fig. 1g and Supplementary Fig. 2a) and some-
uted away from endosteal region, converging significantly closer to times found in clusters, away from arterioles or megakaryocytes
the central vein (Supplementary Fig. 1c,d, P =0.004). However, the (Fig. 1g). The loss of association with megakaryocytes was observed
frequency of Nestin-GFP+ MSCs from compact bones were signifi- despite their overall increased numbers in the BM of old mice
cantly reduced and had a lower colony-forming capacity in culture (Supplementary Fig. 2b,c), with increased numbers of megakaryo-
(Supplementary Fig. 1e,f; P =0.03), indicating differential aging cyte progenitors and age-associated augmentation of platelet counts
manifestations between bone and marrow MSCs. (Supplementary Fig. 2d,e). These results indicate that aging induces
We and others have recently reported that subsets of qui- remodeling of HSC niches, associated with attrition of arteriolar
escent HSCs are significantly associated with arterioles and structures, expansion of total vascular density, and expansion of
Nestin-GFPbright MSCs and megakaryocytes, leading to redistribu- These results thus indicate that the loss of SNS nerves may have
tion of old HSCs away from their putative niches. functional consequences on MSC function during niche aging.
To define better the onset of HSC niche aging, we evaluated
Aging induces the loss of niche-associated adrenergic nerves. The Nestin-GFP BM at 2, 8, and 12 months of age. These analyses revealed
observed arteriolar attrition in old femoral BM (Fig. 1a–c and ref. 17) that the loss of TH+ nerves (P =0.0016) and reduced arteriolar seg-
suggested that aging may compromise SNS innervation, as these ment length (P =0.005), as well as the increased numbers of Nestin-
nerves are tightly associated with arterioles22,24 and are reported GFPbright cells (P =0.02) or CD45−Ter119−CD31−CD51+PDGFRα+
to be lost in hematological malignancies37,38. Staining for tyrosine MSCs (P =0.0015), were already apparent at 8 months of age, whereas
hydroxylase positive (TH+) adrenergic nerve fibers revealed a dra- the changes in overall vascular density were not statistically sig-
matic overall reduction in nerve density in old compared to young nificant at this time (Supplementary Figs. 1a, 4b, and 5a–e). These
femurs (Fig. 2a,b), as well as a significant loss of TH+ nerves per findings are consistent with a recent report documenting the emer-
Nestin-GFPbright arteriole (Fig. 2c). Staining of young and old femurs gence of aging phenotypes, such as HSC expansion and lymphoid
with the pan-neuronal marker β-III tubulin confirmed that aging dysfunction, from 8 months of age44. We also confirmed that the
induced a dramatic loss of BM innervation (Fig. 2d,e). To evalu- frequency and absolute numbers of phenotypic HSCs (Lin−CD48−c-
ate the possibility of neural dysfunction, we assessed the number Kit+Sca-1+CD150+) were significantly increased at 8 months of
of synaptic contacts between nerves and blood vessels by staining age (P =0.04), and found that the HSC population was signifi-
for synaptophysin39. In young mice, the staining pattern of synap- cantly redistributed away from arterioles at this age (Supplementary
tophysin exhibited a spiral-like pattern (similarly to TH staining; Fig. 5f,g; P <0.0001). Thus, SNS neuropathy in BM is an early hall-
Fig. 2c) and highly overlapped with β-III tubulin staining. However, mark of the aging HSC niche, apparent in 8-month-old adult mice
upon aging, the number of synaptophysin+ synapses were signifi- and concurrent with HSC aging.
cantly reduced (Fig. 2f), suggesting a reduction in synapse density
per nerve. The loss of SNS was not generalized during aging because Loss of SNS-nerves induces premature niche and HSC aging.
the nerve density in the aging prostate, an organ highly innervated The loss of sympathetic innervation could merely accompany the
by the SNS40, was not significantly altered compared to young vascular remodeling and aging-associated alterations in hematopoi-
mice (Supplementary Fig. 3a; P =0.285). Additionally, the expres- esis, or alternatively, it could represent a driver of the aging process.
sion of nerve growth factor (Ngf), a major neurotrophin for SNS To investigate this critical issue, we unilaterally denervated the hind
nerves41, which is selectively expressed by MSCs in BM, was sig- limb of young Nestin-GFP or C57BL/6 mice by surgical transection
nificantly reduced upon aging (Supplementary Fig. 3b; P = 0.004). of the femoral and sciatic nerves, as previously described31,45,46, while
As SNS nerves regulate HSC egress in a circadian manner23,30,31,33, the contralateral limb was sham-operated (Fig. 4a). This surgical
we evaluated whether the age-associated BM SNS neuropathy had strategy, of nerve transection in the abdominal area close to their
a functional consequence for circadian rhythms of circulating pro- origin in the spinal column and before neural branching, resulted
genitors. Whereas the number of phenotypic (Lin−Sca-1+c-Kit+) or in a complete loss of TH+ nerves, specifically in the denervated
functional (colony-forming units in culture) progenitors oscillated femur (Supplementary Fig. 6), and thus enabled us to compare the
in a circadian manner in the blood of young mice, the oscillations impact of neural input on the aging phenotype in the same ani-
of blood progenitors were ablated in old mice (Fig. 3a,b). These mal. As we have previously reported, acute BM denervation using
changes were matched by inverse oscillations of HSC retention fac- 6-hydoxydopamine (6OHDA), 7 d post-denervation, did not result
tor Cxcl12 mRNA levels in CD45−Ter119−CD31−CD51+PDGFRα+ in a detectable HSC phenotype at steady state35. Thus, to evaluate
MSCs42 of young mice, while no significant circadian changes were whether SNS nerves play a role in the aging process, we denervated
detected in old MSCs (Fig. 3c). Thus, these results suggest that the mice in their youth (2 months old) and killed them for analysis at
aging HSC niche is associated with the profound loss of functional 4 months postsurgery (6 months of age), to avoid extending the age
SNS nerves. over 8 months when aging phenotypes are apparent (Supplementary
Figs. 1a, 4a–c, and 5a–g and ref. 44).
Aging expands bone marrow MSCs with reduced HSC Strikingly, we found that phenotypic HSCs were more pro-
maintenance capacity. Our previous studies have revealed liferative (Supplementary Fig. 7a) and expanded in the dener-
that CD45−Ter119−CD31−CD51+PDGFRα+ cells highly over- vated but not in the nerve-intact femurs (Fig. 4b), with specific
lap with the Nestin-GFP+ population and contain most expansion of myeloid-biased CD41+ HSCs (Supplementary
MSC- and HSC-maintaining activity42. Consistent with the Fig. 7b), a phenotype reminiscent of chronologically aged
notions that SNS nerves negatively regulated BM MSC prolif- HSCs47. Competitive repopulation assays using whole bone mar-
eration35 and that aging caused BM SNS neuropathy, we found row (WBM) revealed increased overall donor-derived repopula-
that, similarly to Nestin-GFPbright stromal cells (Fig. 1e,f), tion activity in the denervated bone, compared to nerve-intact
CD45−Ter119−CD31−CD51+PDGFRα+ stromal cells obtained from bone, with myeloid-biased differentiation 4 months follow-
old mice were expanded (Fig. 3d and Supplementary Fig. 4b) and ing transplantation and increased engraftment of donor HSCs
were significantly more proliferative compared to young counter- (Supplementary Fig. 7c–i), which is also similar to the previously
parts, as determined by Ki-67 expression (Fig. 3e). Although aging reported competitive advantage of WBM transplantation from
significantly increased the overall BM cellularity (Supplementary old mice48,49. Using a separate cohort of mice, we also evaluated
Fig. 4a; P <0.0001), we did not detect any changes in the absolute the competitive repopulating capacity of 200 sorted HSCs from
numbers and frequency of CD45−Ter119−CD31−CD51−PDGFRα− denervated and nerve-intact BM to assess their self-renewal and
non-MSC cells (Supplementary Fig. 4c), suggesting specificity in differentiation potential. These results revealed dramatic reduc-
MSC expansion. MSCs derived from old mice exhibited lower clo- tions of engraftment capacity and lymphoid cell production of
nogenic potential in vitro (Fig. 3f,g), with reduced osteogenic poten- HSCs harvested from denervated (referred to as denervated
tial (Supplementary Fig. 4d,e), and enhanced in vivo adipogenic HSCs) compared to nerve-intact BM, which was maintained
differentiation following sublethal irradiation, as determined upon secondary transplantation (Fig. 4c,d). To confirm further
by perilipin+ areas (Supplementary Fig. 4f), in line with previ- that unilateral surgical denervation led to aging of HSCs, we
ous reports43. In addition, sorted MSCs from old mice expressed comparatively evaluated the polarity and DNA damage of dener-
lower mRNA levels of the canonical niche factors, Cxcl12, Scf, and vated and nerve-intact HSCs, as aging has previously been sug-
Angpt1 (Fig. 3h), suggesting reduced HSC-maintenance activity. gested to be associated with a loss of polarity and increased DNA
© 2018 Nature America Inc., part of Springer Nature. All rights reserved.
Nature Medicine Articles
a TH+ adrenergic innervation
Young Old
Nes-GFPbright
CD31 CD144
TH
P = 0.0001
2.5
Young Old
e f Young Old
Total nerve density Synapse density
Ratio of synaptophysin
0.005 3.0
area/β-III tubulinarea
P = 0.0016
Ratio of β-III tubulin
2.5 P = 0.0002
area/femur area
0.004
2.0
0.003
1.5
0.002
Merge Merge 1.0
0.001 0.5
0.000 0.0
Young Old CD31 CD144 β-III tubulin Synaptophysin Young Old
Fig. 2 | Aging induces the loss of niche-associated adrenergic nerves. a, Representative confocal z-stack projection montages from the BM of young
and old Nestin-GFP mice stained for CD31+CD144+ double-positive vasculature and TH+ nerve fibers. Scale bar, 500 µm. Arrows denote TH+ nerves.
b, Femoral adrenergic innervation quantified by TH+ area divided by total femur area (normalized to young; n =7 and 12 old projections in young and
old mice, respectively; 4 mice per group). c, Left: representative confocal z-stack projections from the BM of young and old Nestin-GFP mice stained
for CD31+CD144+ double-positive vasculature and TH+ nerve fibers. Scale bar, 100 µm. Right: arteriolar adrenergic innervation quantified by TH+ area
divided by total Nestin-GFPbright arteriole area (normalized to young; n =4 and 10 projections in young and old mice, respectively; 4 mice per group).
d, Representative confocal z-stack projection montages from the femurs of young and old C57BL/6 mice stained for CD31+CD144+ double-positive
vasculature and β-III tubulin+ nerve fibers. Scale bar, 500 µm. Arrows denote β-III tubulin+ nerves. e, Total femoral innervation quantified by β-III
tubulin+ area divided by total femur area (n =9 and 7 projections in young and old mice, respectively; 3 mice per group). f, Left: representative confocal
z-stack projections from femurs of young and old C57BL/6 mice stained for CD31+CD144+ double-positive vasculature, β-III tubulin+ nerve fibers and
synaptophysin+ (Syn+) synaptic vesicles. Scale bar, 100 µm. Right: synapse density as assessed by quantification of Syn+ area per β-III tubulin+ nerve area
(n =54 and 27 projections in young and old mice, respectively; 3 mice per group). Data represented as mean ± s.e.m.; P value determined by two-tailed
t test. At least three independent experiments yielded similar results presented in a and d. For box plots, the box spans from the 25th to 75th percentiles
and the centerline is plotted at the median. Whiskers represent minimum to maximum range.
damage in HSCs10,16. Indeed, immunofluorescence analysis of sorted foci formation was significantly increased in denervated HSCs
HSCs from young, old, sham, or denervated femurs revealed that compared to sham control, reaching frequencies similar to
Cdc42 and tubulin polarity was significantly altered, and γH2AX those seen in old HSCs (Fig. 4e,f and Supplementary Fig. 8a–c).
a Circulating CFU-C
b Circulating LSK
c MSC Cxcl12
2.5 4 2.5
ZT5 ZT5 ZT5
Relative mRNA
P ≤ 0.0001
1.5 1.5
2 P = 0.005
1.0 1.0
1
0.5 0.5
0.0 0 0.0
Young Old Young Old Young Old
d e CD45– Ter119–CD31–
Gated on live
CD51+PDGFRα+
CD45– Ter119–CD31–
CD45– Ter119–CD31– 105 Young
105 Young CD51+PDGFRα+ MSCs
MSCs 104 MSC G0
104
14 0.10 P = 0.002 3
100 P = 0.005
P = 0.006 10
103
12
MSCs per femur (×103)
0.023% 0.08 0 80
0 10 –103 G0 70.6%
MSCs (%)
Cells (%)
8 0.06 60
50 0
10 000
15 000
20 000
0, 0
0
0 103 104 105
25 ,00
00
,
0,
0,
0
6 0.04 40
105 Old
4 MSCs 4 5 Old
10 10
PDGFRα-APC
0.02 20
2
10 3 104
0 0.00 0
Ki-67-PerCP
0.068%
0 Young Old Young Old 103 Young Old
0
0 103 104 105 –103 G0 54.2%
CD51-PE
50 0
10 000
15 000
20 000
0, 0
0
25 ,00
00
,
0,
0,
0
Hoechst
33342
f g h HSC maintenance factors
Mesenspheres
CFU-F 1.5 Cxcl12 1.5 Scf 2.0 Angpt1
(as % of CD51+PDGFRα+ cells)
(as % of CD51+PDGFRα+ cells)
6 2.0
P = 0.0003 P ≤ 0.0001 P = 0.01
P ≤ 0.0001 P ≤ 0.0001
Relative mRNA (fold)
1.5
1.5 1.0
Mesenspheres
1.0
4
CFU-F
1.0 1.0
2 0.5 0.5
0.5 0.5
Fig. 3 | Aging expands MSCs and reduces their HSC maintenance activity. a, b, Circadian oscillations of (a) circulating colony-forming units in culture
(CFU-C; normalized to young at Zeitgeber time (ZT) 5 (n =13 young ZT5, 7 old ZT5, 7 young ZT13, and 4 old ZT13 mice) and (b) Lin−Sca-1+c-Kit+ (LSK)
progenitors (normalized to young at ZT5; n =5 mice per group) in peripheral blood of young and old C57BL/6 mice. c, Quantification of Cxcl12 mRNA
levels relative to Actb in sorted MSCs from young and old C57BL/6 mice at ZT5 and ZT13 (normalized to young at ZT5; n =8 young ZT5, 5 old ZT5,
5 young ZT13, and 4 old ZT13 mice). d, Left: representative FACS plots showing the gating strategy for CD45−Ter119−CD31−CD51+PDGFRα+ MSCs in young
(top) and old (bottom) C57BL/6 mice. Gates and percentages represent frequency of CD51+PDGFRα+ MSCs. Right: absolute numbers and frequency of
MSCs in young and old C57BL/6 mice (n =4 mice per group). e, Left: representative FACS plots showing the gating strategy for MSCs Ki-67 and Hoechst
33342 staining in young (top) and old (bottom) C57BL/6 mice. Right: quantification of Ki-67− G0 MSCs in young and old C57BL/6 mice (n =6 mice per
group). f,g, Frequency of (f) fibroblast colony-forming units (CFU-F; n =15 cultures per group) and (g) mesenspheres (n =9 young, 11 old cultures) from
sorted MSCs plated at equal numbers and clonal densities under CFU-F or mesensphere culture conditions (n =5 mice per group). h, Quantification
of mRNA levels of Cxcl12, Scf, and Angpt1 relative to Gapdh in sorted MSCs (normalized to young; n =7 young, 11 old mice). Data represented as
mean ± s.e.m.; P value determined by two-tailed t test.
These data suggest that the denervation leads to a premature seen in aged mice, characterized by arteriolar segment shorten-
aging-like HSC phenotype, with expansion of myeloid-biased ing (Fig. 4g) and loss of α-SMA+ cells (Supplementary Fig. 8d).
HSCs with reduced long-term self-renewal capacity. In addition, surgical BM denervation in young mice led to aug-
To determine the impact of denervation on aging of the mentations in BM cellularity (Supplementary Fig. 8e) and in
HSC niche, we evaluated the vascular structures and their numbers of CD31high total ECs (Supplementary Fig. 8f) and
associated stromal cells by whole-mount immunofluores- CD45−Ter119−CD31−CD51+PDGFRα+ MSCs (Fig. 4h), which
cence imaging and FACS. Remarkably, denervation induced a exhibited reduced clonogenic potential (Fig. 4i), as observed
remodeling of the BM microenvironment reminiscent of that in chronologically aged mice. Moreover, bone marrow MSCs
© 2018 Nature America Inc., part of Springer Nature. All rights reserved.
Nature Medicine Articles
a b HSCs c Total blood Blood myeloid Blood B cells
60 P = 0.022 80 P = 0.03 60
6 P = 0.0021 P = 0.016
Sham Den P = 0.049
P = 0.02
My
Donor chimerism (%)
80
P = 0.0001 P = 0.009
T
60 60
P = 0.610 Den
40 P = 0.025 40
*
20 ** 20
DAPI
Arteriolar segment
P = 0.006
P ≤ 0.0001 400
80
CD31 CD144
60 300
foci (%)
20 100
Nes-GFPbright
0
0
γH2AX DAPI Young Sham
Sham Den
Old Den
h Gated on live i j
CD45–Ter119–CD31– MSCs CFU-F Cxcl12 Scf Angpt1 Vcam1
Sham 3 1.5 P ≤ 0.0001 P = 0.004 P = 0.024 P = 0.037
30 P = 0.0039 P = 0.013
MSCs
CD51+PDGFRα+ cells)
MSCs per femur (×103)
20 2 1.0
0.06%
PDGFRα-PE/Cy7
Den 10 1 0.5
MSCs
0 0 0.0
0.08%
Sham Den Sham Den Sh D Sh D Sh D Sh D
CD51-PE
Fig. 4 | Surgical denervation of young BM induces premature HSC and niche aging. a, Schematic illustration of the surgical denervation experiment. The
sciatic and femoral nerves were transected in young (2-month-old) C57BL/6 mice and the mice were analyzed 4 months postsurgery, at 6 months of age.
b, Absolute numbers of HSCs (Lin−Sca-1+c-Kit+CD48–CD150+) isolated from sham and denervated (Den) femurs (n = 7 mice). c, Total peripheral blood
(CD45.2+), blood myeloid (Mac-1+CD45.2+), and blood B cell (B220+CD45.2+) donor chimerism at the indicated timepoints post-transplantation. d, Bone
marrow donor chimerism (total CD45.2+ (BM); myeloid (My), Mac-1+CD45.2+; B cell (B), B220+CD45.2+; and T cell (T), CD4+CD8+CD45.2+) 5 months
after (left) primary transplantation of 200 HSCs derived from either sham or Den femurs and transplanted in competition with young BM competitor cells
(n =4 sham, 6 denervated mice) and (right) 5 months after secondary transplantation of 3 × 106 BM from primary recipients. e, Left: representative confocal
z-stack projections of HSCs sorted from sham or denervated femurs and stained with Cdc42, tubulin, and DAPI. Scale bar, 10 µm. Right: quantification of the
percentage of Cdc42 and tubulin polarized HSCs out of total HSCs scored (total of 356 sham and 353 denervated HSCs isolated from 4 mice per group).
f, Left: representative confocal z-stack projections of HSCs sorted from young, old, sham, or denervated femurs and stained with γH2AX and DAPI. Scale
bar, 10 µm. Right: quantification of the percentage of HSCs with γH2AX foci (calculated as the mean percentage of a total of 164 young, 247 old, 381
sham, and 355 Den HSCs isolated from 3 young, 3 old, and 4 denervated mice). g, Left: confocal z-stack projection montages from the femurs of sham
and denervated tibiae from Nestin-GFP mice stained for CD31+CD144+ double-positive vasculature and DAPI. Scale bar, 500 µm. Right: assessment of
arteriolar segment length as assessed by quantification of the length of the Nestin-GFPbright signal covering CD31+CD144+ double-positive arterioles in sham
and denervated tibiae (n =8 and 11 sham and denervated projections, respectively; 4 mice). h, Left: representative gating strategy for FACS quantification
and sorting of MSCs (CD45−Ter119−CD31−CD51+PDGFRα+) in sham (top) and denervated (bottom) femurs. Gated population and percentages represent
frequency of CD51+PDGFRα+ MSCs. Right: quantification of MSCs isolated from sham and denervated femurs (n = 6 mice). i, Frequency of CFU-F from
sorted MSCs from denervated femurs, plated at equal numbers at clonal densities under CFU-F culture conditions (n = 4 mice). j, Quantification of mRNA
levels of Cxcl12, Scf, Angpt1, and Vcam1 relative to Gapdh in sorted bone marrow MSCs derived from sham (Sh) and denervated (D) tibia (normalized to
sham; n =6 mice). Data represented as mean ± s.e.m.; P values determined by two-tailed paired t test in b, h–j and by two-tailed unpaired t test in c–g.
harvested from denervated bones exhibited reduced expression of 3 agonist BRL37344 to denervated mice and found that it could res-
major HSC-maintenance factors (Fig. 4j) and diminished osteo- cue the premature aging phenotypes (Supplementary Fig. 13a–f),
genic potential (Supplementary Fig. 8g), compared to those har- suggesting specificity in the effect of ADRβ3 signaling in the BM
vested from nerve-intact contralateral bones. These data strongly microenvironment.
indicate that the premature loss of SNS nerves in young mice can To confirm further that ADRβ3 agonist treatment rejuvenated
drive the emergence of an aged HSC niche. old HSCs and to obtain further molecular insight, we analyzed
Because unilateral surgical denervation results in complete the transcriptomes by RNA-seq of HSCs sorted from young mice
immobility of the denervated limb, it could be argued that the (yHSCs), old mice (oHSCs), or ADRβ3-agonist rejuvenated old
aging-like HSC and niche phenotypes could be an indirect effect of mice (rHSCs). Using t-distributed stochastic neighbor embedding
reduced limb mobility on the skeleton or to collateral denervation analysis54, we found that the rHSC cluster did not overlap with
of nonhematopoietic organs (for example, muscle). To evaluate this oHSCs and moved closer to yHSCs (Supplementary Fig. 14a), sug-
possibility, we performed a musculocutaneous denervation of the gesting that ADRβ3 agonist treatment altered the gene expression
hindlimb by transecting the sciatic nerve distal to the spinal cord patterns of old HSCs. Unsupervised hierarchical clustering of top
close to the sciatic notch and the femoral nerve distal to the spinal differentially expressed genes also revealed that the rHSCs’ expres-
cord, as previously reported not to directly affect bone and marrow sion signature became similar to that of yHSCs (Supplementary
homeostasis50,51. As expected, hindlimb musculocutaneous dener- Fig. 14b). Pathway analysis of top differentially expressed genes
vation did not eliminate sympathetic nerves in denervated femurs between rHSCs and oHSCs revealed downregulation of genes asso-
and did not induce any aging-like HSC and niche phenotypes ciated with active cell cycle progression, primarily mitosis and cyto-
4 months after surgery (Supplementary Fig. 9a–c), confirming that kinesis (Supplementary Fig. 14c), suggesting that treatment with the
aging-like phenotypes observed in denervated femurs are directly ADRβ3 agonist impacted cell cycle status of old HSCs, reported to
related to BM denervation. be highly variable and a major contributor of heterogeneity within
the aged HSC pool10,55. Moreover, upregulation of genes associated
HSC aging depends on niche-derived ADRβ3 signals. SNS with chemokine activity and cytoskeleton organization was detected
nerves locally deliver noradrenaline as its major neurotransmitter in rHSCs (Supplementary Fig. 14c), pathways reported to be dimin-
targeting β2 (ADRβ2) and β3 (ADRβ3) adrenergic receptors in the ished in old HSCs, and contributing to enhanced mobilization and
BM microenvironment31,33,34. While Adrb2 is broadly expressed in poor homing activity56–58. Further evaluation of lineage-selective
both hematopoietic and nonhematopoietic compartments, Adrb3 gene sets, focusing on those reported to be differentially expressed
expression is restricted to the stroma and does not change with aging in old HSCs11, revealed a restoration toward levels in yHSCs, with
(see our analyses of published HSC52 and stromal53 RNAseq data- more profound effects observed for the lymphoid-lineage genes
sets, as well as Supplementary Fig. 10a–c). We thus tested whether (Fig. 5e). These data indicate that ADRβ3 reprograms an array of
the administration of two sympathomimetics, an ADRβ2-selective pathways that confer rejuvenated phenotypic characteristics.
agonist (clenbuterol) and an ADRβ3-selective agonist (BRL37344), The rejuvenation of old HSCs was likely mediated by the niche
could rejuvenate the HSC niche and HSCs of old mice. Continuous because, in contrast to Adrb2, which is expressed by HSC and pro-
sympathomimetic delivery was achieved by serial subcutaneous genitors, neither young nor old HSCs expressed Adrb3 transcript
implantations of Alzet osmotic pumps in aged C57BL/6 animals or responded to ADRβ3 agonist BRL37344 in vitro (Supplementary
to achieve drug delivery over 12 weeks. As controls, both young Fig. 10a,b). In keeping with an action of the ADRβ3 agonist on the
and old mice received pumps filled with saline (Supplementary niche, immunofluorescence imaging of vascular structures and their
Fig. 11a). Treatment of old mice with either sympathomimetic associated stromal cells revealed partial restoration of arteriolar seg-
was well tolerated and did not produce any hematological toxicity ment length and α-SMA+ cell density by ADRβ3 agonist treatment
as determined by stable blood counts at the termination of drug (Supplementary Fig. 14d–f). In addition, a more detailed analysis
delivery (Supplementary Table 1). Remarkably, the administra- of CD45−Ter119−CD31−CD51+PDGFRα+ MSC functional proper-
tion of either sympathomimetic lowered the absolute numbers and ties revealed significant improvements in Cxcl12, Scf niche factors,
frequencies of MSCs and ECs to levels similar to those observed Ngf expression (Fig. 5f), and CFU-F (fibroblast colony-forming
in young mice, without detectable alterations in BM cellularity unit) activity (Fig. 5g), suggesting a rejuvenated state of aged MSCs.
(Fig. 5a and Supplementary Fig. 11b–e), suggesting a potential for These results suggest that niche rejuvenation by supplementation of
niche rejuvenation. Additionally, treatment of old mice with either ADRβ3 signals in old mice significantly rejuvenates old HSCs and
β-adrenergic-selective sympathomimetic significantly reduced the restored their functional properties.
number of phenotypic HSCs (Fig. 5b and Supplementary Fig. 11f).
To test the rejuvenation potential of these agents on HSC func- Deletion of ADRβ3 in mice induces an accelerated aging of
tion, we then competitively transplanted sorted HSCs obtained HSC niches. Since ADRβ3 mimetics rejuvenated the HSC niche
from these treated mice. While ADRβ2 agonist treatment did not in old mice, we tested whether the constitutive deletion of Adrb3
improve old HSC engraftment or contribution to the lymphoid lin- (Adrb3−/−) could lead to premature aging. Serial analyses of
eage, treatment with the ADRβ3 agonist markedly increased donor Adrb3−/− and control mice at 2.5 and 5 months of age showed a
chimerism to near-normal levels in peripheral blood and BM 5 significant expansion of MSCs with reduced CFU-F and HSC
months following transplantation (Fig. 5c). In addition, the ADRβ maintenance activities at 2.5 months (Fig. 5h–j), without detectable
3 agonist significantly improved multilineage cell production and alterations in BM cellularity or CD31high total ECs (Supplementary
HSC engraftment (Fig. 5c and Supplementary Fig. 11g–j). The Fig. 15a,b). In addition, while other aging phenotypes such as
functional rejuvenation of old HSCs by ADRβ3 agonist treatment reduction in Sca-1highCD31high arteriolar ECs (Supplementary
was also evident following secondary BM transplantation, in which Fig. 15c) and HSC expansion (Fig. 5k) were not present at 2.5
the enhanced BM multilineage contribution and HSC engraftment months of age, they were apparent at 5 months, suggesting that
persisted (Fig. 5d). A separate cohort of animals competitively loss of ADRβ3 signaling in stromal cells may be an initial event
transplanted with WBM also showed similar signs of rejuvena- leading to premature HSC aging. It is notable that the expanded
tion only in the ADRβ3 agonist-treated group, characterized by HSCs were significantly enriched in CD41+ myeloid-biased HSCs47
a reduction in the competitive advantage of old WBM and HSC (Supplementary Fig. 15d; P =0.03), with reductions in lymphoid-
expansion, indistinguishable from that of saline-treated young primed multipotent progenitors (Fig. 5l), common lymphoid pro-
mice (Supplementary Fig. 12a,b). We also administered the ADRβ genitors (Supplementary Fig. 15e), and a trend toward increased
© 2018 Nature America Inc., part of Springer Nature. All rights reserved.
Nature Medicine Articles
a b c Primary HSC transplantation (5 months)
MSCs HSCs Total blood Myeloid Lymphoid HSCs
P = 0.0018
30 P = 0.0001 30 120 P = 0.006
P = 0.0009 0.5
z-score
100 P = 0.002 P ≤ 0.0001 Fgfr1op2 Tia1 Clu
P = 0.007 Hoxb6 Blnk Sdpr 0
80 P = 0.0002 P = 0.02 Hoxb8 Csk Itgb3
P = 0.0016 Osmr Dntt Fhl1
–0.5
60 Plscr2 Elmo1 Tgm2 –1.0
P = 0.043 Anxa7 Flt3
40 Fgr Sdc1 Lymphoid genes Myeloid genes
Fli1 Il15
NES = 1.51
Il17ra
20 Gp1bb
Irf2
P = 0.00
FDR = 0.11
Hip1 NES = –1.34
Lgals3
0 Fgfr1
Mtcp1
P = 0.11
FDR = 0.15
Trim24
f 2.0 P = 0.0198
Epb41 Pik3ap1
Pou2af1
‘YS’ (positively correlated)
yHSC
‘YS’ (positively correlated)
yHSC
Dyrk3
Relative mRNA (fold)
oHSC
Zero cross at 5938
oHSC
P =0.042 Slamf6
P = 0.039
‘OS’ (negatively correlated) ‘OS’ (negatively correlated)
Cebpd
1.5 Mkl1
Sox4 NES = 1.48
P = 0.0065 Ebi3 P = 0.00
P = 0.042 Pml FDR = 0.10
Tnfrsf13c NES = –0.72
Ucp2 P = 0.81
1.0 Ptpn11
Wasl FDR = 0.79
Bcl3
Ncf4
Ddx23
Whsc1l1 ‘OB’ (positively correlated) ‘OB’ (positively correlated)
0.5 Camp
Ikbkb rHSC Zero cross at 5898
rHSC Zero cross at 5898
Ngp
0.0 S100a8
Fyb
yHSC (saline) oHSC (saline)
Hcst
S100a9
Y-saline O-saline O-clenbuterol O-BRL37344 Erg
rHSC (BRL37344)
1.5 P = 0.011
CFU-F (fold)
CFU-F (fold)
100
HSCs per femur (×103)
P = 0.002 P = 0.76
PB lymphoid cells (%)
PB myeloid cells (%)
P = 0.001 P = 0.0002
P = 0.024 Adrb3 +/+ 80
6 30 Adrb3 –/–
10
60
4 P = 0.94 20
P = 0.25 40 Adrb3 +/+
5
2 10 20 Adrb3 –/–
0 0 0 0
2.5 5 2.5 5 2.5 5 2.5 5
Age (months) Age (months) Age (months) Age (months)
Fig. 5 | ADRβ3 signaling is essential for maintenance of aging HSCs. a,b, Absolute numbers of (a) MSCs (CD45−Ter119−CD31−CD51+PDGFRα+) and (b)
HSCs (Lin−Sca-1+c-Kit+CD48−CD150+) in young and old mice implanted with osmotic pumps containing saline, the β2-adrenergic agonist clenbuterol, or
the β3-adrenergic agonist BRL37344 (n = 7 young +saline (Y-saline), 6 old +saline (O-saline), 8 old +clenbuterol (O-clenbuterol), and 5 old + BRL37344
(O-BRL37344) mice). Colors as in f. c, Total blood chimerism (CD45.2+), blood myeloid chimerism (Mac-1+CD45.2+), blood lymphoid chimerism
(B220+CD4+CD8+CD45.2+), and HSC chimerism (Lin−Sca-1+c-Kit+CD48−CD150+CD45.2+) in CD45.1 recipient mice transplanted with 200 HSCs, derived
from the mice described in a and b, at 5 months after transplantation (n = 5 young +saline, 4 old +saline, 4 old +clenbuterol, and 4 old + BRL37344 mice).
d, Bone marrow chimerism following secondary BM transplantation from the mice described in c, 5 months after transplantation. (n = 5 young + saline,
4 old +saline, 5 old +clenbuterol, and 5 old + BRL37344 mice). e, Heat map of mean gene expression levels in yHSCs, oHSCs, and rHSCs (n = 3 samples
per group) of selected myeloid, lymphoid, and megakaryocyte and platelet (Mk/platelet) lineage genes and signature enrichment plots from GSEA using
myeloid and lymphoid signature gene sets11. Shown are the normalized enrichment score (NES), P value, and false discovery rate (FDR) of the enrichment.
f, Quantification of mRNA levels of Cxcl12, Scf, and Ngf relative to Actb in sorted MSCs derived from mice described in a and b (n = 5 young + saline,
4 old +saline, 5 old +clenbuterol, and 4 old +BRL37344; normalized to young + saline). g, CFU-F frequency from sorted MSCs derived from mice
described in a and b (normalized to young + saline; n = 5 young +saline, 6 old +saline, and 4 old + BRL37344 mice). h, Absolute numbers of MSCs from
Adrb3+/+ and Adrb3−/− mice at 2.5 and 5 months of age (normalized to Adrb3+/+; n =4 mice per 2.5-month group, 6 Adrb3+/+, 7 Adrb3−/− per 5-month
group). i,j, CFU-F frequency from sorted MSCs (i; normalized to Adrb3+/+; n =5 mice per group) and quantification of mRNA levels of Cxcl12, Scf, Angpt1,
and Ngf relative to Gapdh in sorted MSCs (j; normalized to Adrb3+/+; n = 5 Adrb3+/+ and 4 Adrb3−/− mice) from 2.5-month-old Adrb3+/+ and Adrb3−/− mice.
k–n, Absolute numbers of (k) HSCs, (l) lymphoid-primed multipotent progenitors (LMPPs; Lin–Sca-1+c-Kit+CD34+Flt3+), (m) peripheral blood (PB)
myeloid cells (Mac-1+Gr-1+), and (n) lymphoid cells (B220+CD4+CD8+) cells in Adrb3+/+ and Adrb3−/− mice at 2.5 and 5 months of age (n =4 mice per
2.5-month group, 7 (k–i) and 8 (m,n) per 5-month group). Data represented as mean ± s.e.m.; P values determined by two-tailed t test. For box plots, the
box spans from the 25th to 75th percentiles and the centerline is plotted at the median. Whiskers represent minimum to maximum range.
common myeloid progenitors and granulocyte-macrophage pro- modulating the neural input to the niche. Protection of endoge-
genitors (Supplementary Fig. 15f,g), leading to myeloid bias and nous SNS nerves or supplementation of ADRβ3 signals in old age
lymphopenia in peripheral blood (Fig. 5m,n), reminiscent of may thus offer an exciting new avenue for niche-targeted stem
premature aging. To confirm further that the accelerated aging cell rejuvenation therapy.
phenotype observed in Adrb3−/− mice derives from the deletion of
Adrb3 in the niche, we carried out reciprocal BM transplantation of Methods
young wild-type BM into lethally irradiated control (Adrb3+/+) or Methods, including statements of data availability and any asso-
Adrb3−/− young mice (Supplementary Fig. 15h). To detect prema- ciated accession codes and references, are available at https://doi.
ture aging phenotypes, chimeric mice were analyzed at 5 months org/10.1038/s41591-018-0030-x.
of age (3 months post-transplantation; Supplementary Fig. 15i).
We found that Adrb3 deletion in the microenvironment was suffi- Received: 12 June 2017; Accepted: 12 March 2018;
cient to induce aging-like changes in BM progenitors, although the Published online: 7 May 2018
numbers of HSCs and lymphoid-primed multipotent progenitors
were not altered at this time (Supplementary Fig. 15k). Moreover, References
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M.M. designed the study, performed most of the experiments, and analyzed data; A.H.Z.
45. Afan, A. M., Broome, C. S., Nicholls, S. E., Whetton, A. D. & Miyan, J. A.
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and their immediate progeny via integrated proteome, transcriptome, and
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© 2018 Nature America Inc., part of Springer Nature. All rights reserved.
Nature Medicine Articles
followed by 3 washes with 2% DS 0.1% Triton X-100/PBS and 30 min incubation In vivo administration of β-adrenergic agonists. For long-term administration
with Alexa Fluor 568-conjugated goat anti-rabbit IgG (cat: A11011, Invitrogen) of β-adrenergic agonists, clenbuterol (Sigma) and BRL37344 (Sigma) were dosed
secondary antibody and 0.2% DAPI (4′,6-diamino-2-phenylindole; Sigma). at 2 mg kg−1 d−1 and 2.4 mg kg−1 d−1, respectively, using subcutaneously implanted
All images were acquired at room temperature using a Zeiss Axio examiner D1 Alzet osmotic pumps (model 2006; DURECT Corporation). Six weeks following
microscope (Zeiss) with confocal scanner unit (Yokogawa), and reconstructed implantation of the first pump, an additional pump was implanted for a total of
in three dimensions with Slide Book software (Intelligent Imaging Innovations). 12 weeks of continuous drug delivery. Control animals were implanted with Alzet
Image analysis was performed using both Slide Book software (Intelligent Imaging pumps containing saline (PBS; Gibco).
Innovations) and the Fiji build of ImageJ (NIH).
Statistics and reproducibility. All data are represented as mean ± s.e.m. No
Immunofluorescence staining and imaging of sorted HSCs. Immunofluorescence statistical method was used to predetermine sample sizes; sample sizes were
staining for either γH2AX or Cdc42 and tubulin was adapted from10,16. determined by previous experience with similar models of hematopoiesis,
Lineage−CD48−Sca-1+c-Kit+CD150+ HSCs were directly sorted on polylysine as shown in previous experiments done in our laboratory23,24,27,35,42,53. For all
coated slides (P0425-72AE; Sigma), 500–2,000 cells per slide, incubated for 10 min, experiments, mice were randomly assigned to experimental groups and no sample
fixed with 4% PFA for 10 min at room temperature (20–25 °C), and permeabilized blinding was used for experiment collection or analysis. Sample exclusion was only
with 0.2% Triton X-100 for 20 min at room temperature. Consequently, the cells done as a result of premature mouse death or infection due injury or improper
were blocked with 1% BSA/PBS overnight at 4 °C. For γH2AX staining, cells were healing postsurgery. Experiments presented were successfully reproduced at least
incubated with 0.125 μg (5 μL of 25 μg mL−1) FITC-conjugated anti-phospho-H2A.X three times. For box plots, box span from the 25th to 75th percentiles and the
(ser139) antibody (clone: 2F3; cat: 613404; Biolegend) for 2 h at 37 °C. Primary centerline is plotted at the median. Whiskers represent minimum to maximum
antibody staining was followed by 3 washes with PBS and 10 min incubation with range. Comparisons between two groups were done using unpaired two-tailed
0.2% DAPI (Sigma). For Cdc42 and tubulin staining, cells were incubated with t tests and paired two-tailed t tests for denervation experiments. The t ratio was
rabbit polyclonal anti-Cdc42 antibody (1:50 dilution, cat: 07-1466; Millipore) and calculated as difference between sample means divided by the standard error of
rat monoclonal anti-tubulin antibody (1:100 dilution, clone: YL1/2; cat: ab6160; the difference and calculated by combining the s.e.m. of the two groups. Degrees
Abcam) for 2 h at 37 °C. Primary antibody staining was followed by 3 washes with of freedom (df) were calculated as total sample size – 2 (t values and degrees of
PBS and 1 h incubation at room temperature with Alexa Fluor 633-conjugated goat freedom are provided in source data). One-way ANOVA with Tukey’s multiple
anti-rabbit IgG (cat: A21071; Invitrogen) and Alexa Fluor 488-conjugated goat anti- comparisons tests were used for multiple group comparisons; two-way ANOVA
rat IgG (cat: A11006; Invitrogen) both at 1:100 dilution. Secondary antibody staining with Bonferroni’s multiple comparison tests were used for multiple-parameter
was followed by 3 washes with PBS and 10 min incubation with 0.2% DAPI (Sigma). analysis, and two-sample Kolmogorov–Smirnov tests were used for comparisons
All images were acquired using a Zeiss Axio examiner D1 microscope (Zeiss) with of distribution patterns. Data statistical analyses and presentation were performed
confocal scanner unit (Yokogawa), and reconstructed in three dimensions with Slide using GraphPad Prism 7 (GraphPad Software, San Diego, CA), FACS Diva 6.1
Book software (Intelligent Imaging Innovations). Image analysis was performed software (BD Biosciences), FlowJo 10.0.8 (LLC), Slide Book (Intelligent Imaging
using Slide Book (Intelligent Imaging Innovations). Innovations), and Fiji build of ImageJ (NIH).
RNA isolation and quantitative real time PCR (q-PCR). RNA isolation and Reporting summary. Further information on experimental design is available in
q-PCR were performed as described previously24. All mRNA expression levels were the Nature Research Reporting Summary.
calculated relative to Gapdh or Actb. To ascertain that the expression levels of the
housekeeping genes did not change with age, for all experiments, Actb mRNA levels Data availability. RNA sequencing data have been deposited in the Gene
were quantified relative to Gapdh and did not show any changes. The sequences of Expression Omnibus under accession number GSE109546. Source data are
the oligonucleotides used can be provided upon reasonable request. available for Figs. 1–5. All other source data are available upon reasonable request
from the corresponding author.
RNA-seq and analysis. Total RNA from 2,000 sorted HSCs was extracted using
the RNeasy Plus Micro kit (Qiagen), and assessed for integrity and purity using an
Aligent 2100 Bioanalyzer (Agilent Technologies). Complementary DNA libraries References
were then generated using the SMART-Seq v4 Ultra Low Input RNA Kit for 60. Pierce, H. et al. Cholinergic signals from the CNS regulate G-CSF-mediated
Sequencing (Clontech Laboratories) and the Nextera XT DNA Sample Preparation HSC mobilization from bone marrow via a glucocorticoid signaling relay.
Kit (Illumina). The libraries were then submitted for Illumina NextSeq 500 Cell Stem Cell 20, 648–658.e4 (2017).
sequencing (150-bp, single-ended) according to standard procedures (ENSEMBL 61. Kawamoto, T. & Shimizu, M. A method for preparing 2- to 50-micron-thick
Mus musculus reference genome GRCm38, release 77). RNA-seq data generated fresh-frozen sections of large samples and undecalcified hard tissues.
from Illumina NextSeq 500 were processed using the following pipeline. Briefly, Histochem. Cell Biol. 113, 331–339 (2000).
single- and double-ended sequencing reads were aligned to the mouse genome 62. Subramanian, A. et al. Gene set enrichment analysis: a knowledge-based
(mm10) using Spliced Transcripts Alignment to a Reference (STAR 2.5.3a). approach for interpreting genome-wide expression profiles. Proc. Natl. Acad.
Aligned reads were then quantified to transcriptome (mm10; Ensembl Transcripts Sci. USA 102, 15545–15550 (2005).
release 83) and normalized. Differentially expressed genes were identified using 63. Mootha, V. K. et al. PGC-1α-responsive genes involved in oxidative
Partek Flow. Hierarchical clustering, and Gene Set Enrichment Analysis (GSEA)62,63 phosphorylation are coordinately downregulated in human diabetes.
was then performed on the top 150 variable genes. Nat. Genet. 34, 267–273 (2003).
© 2018 Nature America Inc., part of Springer Nature. All rights reserved.
nature research | life sciences reporting summary
Corresponding author(s): Paul S. Frenette
Initial submission Revised version Final submission
` Experimental design
1. Sample size
Describe how sample size was determined. No statistical method was used to predetermine sample size. Sample size was
predetermined according to statistical data analysis of previous studies utilizing
similar models of hematopoiesis done in our laboratory. See citations in the
Statistics parts of the Methods section in the manuscript.
2. Data exclusions
Describe any data exclusions. Sample exclusion was done only as a result of premature mouse death or infection
due injury or improper healing post surgery.
3. Replication
Describe whether the experimental findings were All attempts of replication were successful.
reliably reproduced.
4. Randomization
Describe how samples/organisms/participants were Mice were randomly assigned to experimental groups. All experiments were
allocated into experimental groups. repeated in both male and female mice. For all experiments comparing mice at
different ages, age and sex matched mice were randomly assigned to each test
group.
5. Blinding
Describe whether the investigators were blinded to No sample blinding was utilized for either data collection or analysis. Data blinding
group allocation during data collection and/or analysis. was not possible for most experiments due to obvious difference in mouse size and
weight between young and old mice. Denervation experiments compared samples
derived from the same mouse (denervated versus sham limb)
Note: all studies involving animals and/or human research participants must disclose whether blinding and randomization were used.
June 2017
1
6. Statistical parameters
n/a Confirmed
The exact sample size (n) for each experimental group/condition, given as a discrete number and unit of measurement (animals, litters, cultures, etc.)
A description of how samples were collected, noting whether measurements were taken from distinct samples or whether the same
sample was measured repeatedly
A statement indicating how many times each experiment was replicated
The statistical test(s) used and whether they are one- or two-sided (note: only common tests should be described solely by name; more
complex techniques should be described in the Methods section)
A description of any assumptions or corrections, such as an adjustment for multiple comparisons
The test results (e.g. P values) given as exact values whenever possible and with confidence intervals noted
A clear description of statistics including central tendency (e.g. median, mean) and variation (e.g. standard deviation, interquartile range)
Clearly defined error bars
See the web collection on statistics for biologists for further resources and guidance.
` Software
Policy information about availability of computer code
7. Software
Describe the software used to analyze the data in this Data analysis and presentation was performed using either GraphPad Prism 7
study. (GraphPad Software, San Diego, CA), FACS Diva 6.1 software (BD Biosciences),
FlowJo 10.0.8 (LLC), Slide Book software (Intelligent Imaging Innovations) and Fiji
build of ImageJ (NIH). All statistical analyses were performed using GraphPad Prism
7.
For manuscripts utilizing custom algorithms or software that are central to the paper but not yet described in the published literature, software must be made
available to editors and reviewers upon request. We strongly encourage code deposition in a community repository (e.g. GitHub). Nature Methods guidance for
providing algorithms and software for publication provides further information on this topic.
June 2017
2
9. Antibodies
All flow cytometry antibodies were anti-mouse and their specificity was validated
in previous studies performed in our laboratory.
Most imaging antibodies were validated in previous studies done by our
laboratory, the specificity of other antibodies was validated by comparing antibody
staining with staining of isotope control antibodies and secondary antibody only
staining.
Please citations in the Online Methods part of the manuscript for our previous
studies using similar antibodies.
d. If any of the cell lines used are listed in the database N/A
of commonly misidentified cell lines maintained by
ICLAC, provide a scientific rationale for their use.
3
` Animals and human research participants
June 2017
4
nature research | flow cytometry reporting summary
Corresponding author(s): Paul S. Frenette
Initial submission Revised version Final submission
` Data presentation
For all flow cytometry data, confirm that:
1. The axis labels state the marker and fluorochrome used (e.g. CD4-FITC).
2. The axis scales are clearly visible. Include numbers along axes only for bottom left plot of group (a 'group' is an analysis of
identical markers).
3. All plots are contour plots with outliers or pseudocolor plots.
4. A numerical value for number of cells or percentage (with statistics) is provided.
` Methodological details
5. Describe the sample preparation. Nucleated single-cell suspensions enriched from bone marrow were
obtained by flushing and dissociating BM plugs using a 21G needle in
phosphate-buffered saline (PBS; Gibco). Single-cell suspensions enriched
from peripheral blood were obtained by retro orbital or cheek bleeding of
mice. For analysis of stromal and endothelial cell populations, intact
flushed bone marrow plugs were digested for 30 min at 37°C in 1 mg ml-1
Collagenase type IV (Gibco) and 2 mg ml-1 Dispase (Gibco) in Hank’s
balanced salt solution (HBSS; Gibco). Compact bones (after flushing out
marrow) were crushed and digested in 3 mg ml-1 Collagenase type 1A
(Sigma) in 1% FBS/HSBSS for 90 min rotating at 37°C. For FACS analysis or
sorting, cells were stained with antibodies in PEB (PBS containing 0.5% BSA
and 2 mM EDTA). Dead cells and debris were excluded by FSC, SSC and
DAPI (4', 6-diamino-2-phenylindole; Sigma) staining profiles. To eliminate
the non-endothelial CD31+ fraction, total ECs quantified by FACS were
identified as CD45− Ter119− CD31high Sca-1+ and arteriolar ECs were
identified as CD45− Ter119− CD31high Sca-1high. For sorting ECs, anti-
CD31-Alexa Fluor 647 (MEC13.3; 102516) was injected intravenously 10
min prior to sacrificing mice.
6. Identify the instrument used for data collection. BD LSRII Special Order System (BD Bioscience) was used for all data
acquisition (H55100027).
BD FACSAria IIu (P46900051) and BD FACSAria II (P69500137) Special
Order Systems were used for most sorting experiments.
MoFlo Astrios EQ (Beckman coulter) was used for sorting HSCs for RNA-seq
analysis and imaging.
7. Describe the software used to collect and analyze Data was collected using BD FACSDiva 6.1 (BD Biosciences) software
the flow cytometry data. Data was analyzed with FACSDiva 6.1 and FlowJo V.10.1 (LLC) softwares
8. Describe the abundance of the relevant cell Purity of cells sorted or analyzed was determined by their appropriate
populations within post-sort fractions. frequency and absolute numbers determined for control wild-type young
June 2017
1
sort analysis.
9. Describe the gating strategy used. For all flow cytometric analysis and sorting debris were excluded by FSC,
June 2017