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Fully Compiled Chm102-1
Fully Compiled Chm102-1
Fully Compiled Chm102-1
INTRODUCTORY CHEMISTRY II
MODULE 1
INSTRUCTOR 1
BRIEF INTRODUCTION TO
CHM 102 TOPICS
THEORY AND TECHNIQUES OF
QUALITATIVE INORGANIC ANALYSIS
Qualitative Inorganic Analysis:
• A method of analytical chemistry which seeks to
find elemental composition of inorganic
compounds through various reagents.
• Deals with careful detection of ions in
an aqueous solution.
• The solution is treated with various reagents to
test for reactions characteristic of certain ions,
which may cause color change, formation of ppt
or other visible changes.
PHYSICAL APPEARANCE OF
INORGANIC SALTS.
• Black -----
• MnO, MnO2, FeO, CuO, Co3O4, Ni2O3;
Also sulfides of Ag+, Cu+, Cu2+,Ni2+, Fe2+, Co2+,
Pb2+, Hg2+, Bi3+
• Blue------- Hydrated Cu2+ salts
• Red -------HgO, HgI2, Pb3O4
• Green ------Cr3+, Ni2+, hydrated Fe2+ salts
PHYSICAL APPEARANCE OF
INORGANIC SALTS, contd.
• The reagent used is any substance that gives S2− ions in such
solutions; most commonly used are hydrogen sulfide (at 0.2-
0.3 M) in the presence of dilute HCl.
THE PROPOSALS
(1) That, there must be something unique in the
electronic configuration of inert gas atoms which
prevents their combination with other atoms,
(2) That other atoms unite with one another so as to
acquire electronic configuration like the inert gas atoms.
The theory that developed around these models/proposal became
most closely associated with Lewis theory.
LEWIS THEORY,
By Lewis theory, the following basic ideas/points could be
developed:
1. Electrons, especially those of the outermost (i.e. Valence)
electronic shell, play a fundamental role in chemical bonding;
2. In some cases, chemical bonding results from the transfer of one or
more electrons from one atom to another. This leads to the
formation of positive and negative ions and a bond type called
ionic.
3. In other cases, chemical bonding involves the sharing of
electrons between atoms. This leads to formation of
molecules having a bond type called covalent.
MODULE 2
INSTRUCTOR 1
TYPES OF CHEMICAL BONDS
Ionic Bonds
Covalent Bonds
Coordinate covalent or Dative Bonds.
Hydrogen Bonds
TYPES OF CHEMICAL BONDS
In the diagram,
Sodium transfers one of its valence electrons
to chlorine, resulting in formation of a sodium
ion with no electrons in its 3n shell and having
a full 2n shell;
The chloride ion gains the one electron to
have eight electrons in its 3n shell, thereby
giving the chloride ion a stable octet.
IONIC BONDS
MODULE 3
INSTRUCTOR 1
POLAR COVALENT BOND
For example:
H+ Cl-
POLAR COVALENT BOND
Donor Acceptor
COORDINATE COVALENT BOND
• Example:
• The bond between ammonia, (NH3) &
hydrogen ion, (H+) to give ammonium (NH4+).
• Nitrogen contributes the two electrons needed
to bond with hydrogen and therefore form the
ammonium ion with a Coordinate or dative
bond.
COORDINATE COVALENT BOND
EXCEPTIONS TO THE OCTET RULE
a) Odd-Electron species
b) Incomplete octets
c) Expanded octets
Odd-Electron species
INCOMPLETE OCTETS
MODULE 4
INSTRUCTOR 1
EXCEPTIONS TO THE OCTET RULE, contd
EXPANDED OCTETS
•
RESONANCE IN CHEMICAL BONDING, contd
MODULE 5
INSTRUCTOR 1
THE VALENCE BOND THEORY
The theory:
Ammonia 107
Water 104.5
VSEPR THEORY
VSEPR Rules:
1. Identify the central atom
2. Count its valence electrons
3. Add one electron for each bonding atom
If the central atom is positive,
• then subtract 1 electron from the overall electron
total; if the central atom is negative,
• then add 1 electron to the overall electron total.
VSEPR THEORY
4. Add or subtract electrons for charge;
5. Divide the total of these by 2 to find the
total number of electron pairs;
6. Use this number to predict the shape.
CHEMICAL BONDING
MODULE 5B
INSTRUCTOR 1
VALENCE SHELL ELECTRON-PAIR REPULSION
(VSEPR) THEORY, contd
VALENCE SHELL ELECTRON-PAIR REPULSION
(VSEPR) THEORY, contd
MODULE 6
INSTRUCTOR 1
INTERMOLECULAR FORCES OF ATTRACTION
These are:
• Instantaneous and induced dipoles
• Dipole-dipole interactions
•
DIPOLE-DIPOLE ATTRACTIONS
• Permanent dipole-
Exists in all polar molecules due to difference in
E.N values of bonded atoms.
Instantaneous dipole-
• Temporary dipole that exists as a result of
fluctuation in the electron cloud.
Induced dipole-
• Temporary dipole created due to influence of a
neighboring dipole (permanent or instantaneous).
DIPOLE-DIPOLE INTERACTIONS
MODULE 7
INSTRUCTOR 1
HYDROGEN BONDING
MODULE 8
INSTRUCTOR 1
HYBRIDIZATION OF ATOMIC ORBITALS
In Hybridization
• Atomic orbitals with equal energies undergo
hybridization.
• The number of hybrid orbitals formed is equal
to the number of atomic orbitals mixing.
• The bigger lobe of the hybrid orbital always
has a positive sign, while the smaller lobe on
the opposite side has a negative sign.
HYBRIDIZATION PROCESS
• Examples
• All the compounds of Boron i.e. BF3, BH3
• All the compounds of carbon containing a
carbon-carbon double bond, Ethylene (C2H4)
sp3 Hybridization
MODULE 9
INSTRUCTOR 1
NAMES OF THE NOBLE GASES
Argon Krypton
Helium Neon Xenon Radon
Enthalpy of vaporization
0.08 1.74 6.52 9.05 12.65 18.1
(kJ/mol)
Solubility in water at 20 °C
8.61 10.5 33.6 59.4 108.1 230
(cm3/kg)
Coordination Compounds-
• Very electronegative atoms bond to Kr, Xe, Rn;
• Xenon compounds are the most numerous of the noble gas
compounds that have been formed.
• Most of them have the xenon atom in the oxidation state of
+2, +4, +6, or +8 bonded to highly electronegative atoms
such as fluorine or oxygen;
• Xenon reacts with fluorine to form numerous xenon
fluorides according to the following equations:
• Xe + F2 → XeF2
• Xe + 2F2 → XeF4
• Xe + 3F2 → XeF6
COMPOUNDS OF THE NOBLE GASES
CLATHRATES
• They are also known as cage compounds;
• They are compounds of noble gases in which they
are trapped within cavities of crystal lattices of
certain organic and inorganic substances;
• The molecules of the host form a cage-like
crystalline lattice within which there are open
spaces that may be occupied by molecules of a
second compound or element called the guest.
CLATHRATES COMPOUNDS, contd
CLATHRATES COMPOUNDS, contd
CLATHRATES COMPOUNDS, contd
Helium
• Helium is used in breathing gas mixture by deep-
sea divers to prevent oxygen, nitrogen and carbon
dioxide toxicity.
• He is used in preference to nitrogen to dilute
oxygen in the gas cylinders used by divers.
Due to low solubility of He in fluids, He does
not dissolve in blood. It does not form bubbles
on decomposition as N2 does because nitrogen
is quite soluble in blood
USES OF GROUP VIII (O) GASES
NEON
• Neon is used in neon discharge tubes
ARGON
• The largest use of argon is to provide an inert
atmosphere for metallurgical processes e.g. welding
stainless steel, titanium etc. thus, He and Ar are used to
blanket materials that need to be protected from N2, O2;
• Argon – nitrogen mixture used to fill electric light
bulbs, fluorescent lamps to increase efficiency and life
of the bulbs.
USES OF GROUP VIII (O) GASES
body.
radiotherapy.
THE ALKALI METALS
GROUP 1A
MODULE 10
INSTRUCTOR
1
HISTORY/GENERAL PROPERTIES
Atomic no 3 11 19 37 55 87
With Halogens,
• They all form simple halides
• Heavier members form polyhalides in addition
e.g. KI3, RbI3 etc.
CHEMICAL PROPERTIES/REACTIONS OF
ALKALI METALS
With H2O
• they all react vigorously and violently, with water,
liberating hydrogen and forming strong caustic
solutions which are highly soluble.
1
Na + H2O → NaOH + H2
2
With Oxygen
▪ Li and Na form monoxides;
• Heavier elements form superoxides. The
peroxides too can be prepared, Li2O2, Na2O2
CHEMICAL PROPERTIES/REACTIONS OF
ALKALI METALS
With hydrogen
• They form ionic hydrides prepared by heating
the metal in dry hydrogen;
2𝑁𝑎 + 𝐻2 → 2𝑁𝑎𝐻
COMPOUNDS OF GROUP 1A METALS
Hydroxides
Similarly,
• For LiF, NaF, RbF, CsF, µo (lattice energy), decreases from Li to Cs.
Lithium
• Used in metallurgy as a scavenger of impurities e.g. in
the refining of Fe, Ni, Cu, and Zn;
• Used in the production of certain light metal alloys e.g.
gives high temperature strength to aluminum and
ductility to magnesium;
• Alloyed with Ag for brazing (joining metals together);
• In the manufacture of light weight electrical batteries;
• In the manufacture of H-bombs. Isotope Li gives
tritium gas which when bombarded with neutrons gives
H-bombs
USES OF ALKALI METALS
Sodium
• As reducing agent to produce high melting point metals
e.g. Ti, Zr;
• In the detergent industry where sodium alkyl sulfates
are employed;
• NaOH in the manufacture of soap, in petroleum
refining and textiles;
• In the production of dyes and dye intermediates;
• In perfumery;
• As heat transfer fluid in nuclear reactors;
• In the reduction of organic compounds.
USES OF ALKALI METALS
Potassium
• Manufacture of fertilizers
• KO2 used in life support systems. A source of
O2 supply in respiratory equipment since it
generates O2 and absorbs CO2.
USES OF ALKALI METALS
Rubidium
Minor economic significance;
Cesium
• In nuclear reactors;
• Cesium salts used in photomultiplier tubes, IR
lamps and spectrophotometers
CHEMISTRY OF ALKALINE EARTH
METALS,
GROUP IIA (GROUP 12)
MODULE 11
INSTRUCTOR 1
ABUNDANCE/OCCURRENCE
Atomic Ionization
Atomic Mass Oxidation Electron Melting Boiling Redox
Radius Energy
no. (g) State(s) Configuration Point Point potential
(pm) (kJ/mol)
Oxides
All group 2 elements except barium react
directly with oxygen to form the simple oxide
MO.
2𝑀 + 𝑂2 → 2𝑀𝑂
Sulphates
Solubility of Sulphates decreases down the
group.
THERMAL STABILITY OF COMPOUNDS OF GROUP IIA
ELEMENTS
Hydroxides
Solubility of hydroxides increases down the group. Why?
• Ease of ion formation increases
• Lattice energy decreases with increase in size
• Be (OH)2 is covalent because of high polarizing effect of small
size
• Mg OH 2 → Mg ++ + 2OH−
• K sp = Mg ++ OH− = 8.9 × 10−12
Ca OH 2 = 1.3 × 10−6
Sr(OH)2 = 3.2 × 10−4
Ba(OH)2 = 5.0 × 10−3
SOLUBILITIES OF GROUP II COMPOUNDS
Barium
• Medical use of BaSO4 in “barium milkshakes” for
identifying digestive problems by x-rays . Thus BaSO4 is
used as a contrast agent for x-ray imaging of the digestive
system
• BaCO3 as rat poison
• Radium – most radioactive. Exposure can cause cancer etc.
SIMILARITIES BETWEEN BE AND AL
MODULE 12
INSTRUCTOR 1
ABUNDANCE
• Hydrogen is the most abundant chemical
substance in the universe, especially in stars
and gas giant planets.
• However, monoatomic hydrogen is rare on
Earth because of its tendency to form covalent
bonds with most elements.
• Hydrogen is prevalent on Earth in the form of
chemical compounds such as hydrocarbons
and water.
GENERAL PROPERTIES
• Zn + 2HCl → ZnCl2 + H2 ↑
• Zn + H2SO4 → ZnSO4 + H2 ↑
PHYSICAL PROPERTIES OF HYDROGEN
• H2(g)+Cl2(g)→2HCl(g)
• 3H2(g)+N2(g)→2NH3(g)
HYDRIDES
Metallic Hydrides
• Also known as interstitial hydrides;
• It involve hydrogen bonds with transition metals.
• These are usually formed by transition metals and
are mostly non-stoichiometric, hard, high melting
and boiling points.
Examples are:
TiH, cadmium, etc
USES OF HYDRIDES
MODULE 5B
INSTRUCTOR 1
VALENCE SHELL ELECTRON-PAIR REPULSION
(VSEPR) THEORY, contd
VALENCE SHELL ELECTRON-PAIR REPULSION
(VSEPR) THEORY, contd
1
Introduction
Alkanes are aliphatic saturated hydrocarbons that have the general
formula CnH2n+2 i.e. the carbon atoms are surrounded by the highest no of
H-atoms. Pentane for example can be written in the condensed form as
CH3CH2CH2CH2CH3, showing that the C-atoms in pentane are
completely saturated with the maximum number of H-atoms possible.
Alkanes can be unbranched or branched. The C-atoms are sp3 hybridized
and the compounds have a general tetrahedral orientation.
2
Alkanes are found on earth and on other planets. The primary source of
alkanes on earth is petroleum and natural gas. Natural gas consists
mainly of methane with smaller quantities of ethane, propane, butane and
isobutane. Petroleum is a complex mixture of organic compounds formed
from the anaerobic decomposition of plant and animal remains over time,
most of which are alkanes and aromatic compounds. It also contains
small amounts of oxygen-, nitrogen- and sulphur containing compounds.
Refining of petroleum (crude oil) is majorly by fractional distillation to
give gas (C3, C4), gasoline (C5‒C11), kerosene (C9‒C16) and gas oil or
diesel (C15‒C25). Distillation under reduced pressure further gives
lubricating oil and waxes, leaving asphalt behind.
3
It turns out that gasoline obtained straight from distillation of crude
oil is a poor fuel because of the phenomenon of engine knock in
internal combustion engines. The octane number (or rating) of a fuel
is the measure by which its antiknock properties are judged. Straight
chain hydrocarbons are far more prone to induce engine knock than
branched ones. 2,2,4-Trimethylpentane is assigned an octane
number of 100 and heptane is assigned a value of 0. A mixture of
87% 2,2,4-trimethylpentane (isooctane) and 13% heptane would be
rated as 87 - octane gasoline. Catalytic cracking is the method used
to obtain good fuel from high-boiling kerosene fraction (C12-C14).
This method involves the breaking apart of the molecules, which
then rearrange to smaller, highly branched alkanes containing 5‒10
C-atoms. Aromatic compounds also have high octane ratings and are
desirable components of gasoline. Catalytic reforming is the process
by which straight-chain alkanes from straight-run gasoline are
converted into aromatic molecules such as toluene.
4
Important Digression
Organic chemists represent the structural formula of compounds in one
of the following ways:
a. Dash structural formula
It involves drawing the chains of atoms in a straight line and often the
lone pair of electrons are omitted. This shows the connectivity of atoms
in a molecule represented in two dimensions and is a rather convenient
way to draw. It does not represent the actual shape of the molecule
drawn. E.g. H H
H C O C H
H H
b. Condensed structural formula:
Involves writing a formula without showing all the individual bonds. In a
condensed structure, each central atom is shown together with the atoms
that are bonded to it. The atoms bonded to a central atom are often listed
after the central atom (as in CH3CH3 rather than H3C-CH3) even
if that is not their actual bonding order.
5
In many cases, if there are two or more identical groups, parentheses and
a subscript may be used to represent all the identical groups.
When a condensed structural formula is written for a compound
containing double or triple bonds, the multiple bonds are often drawn as
they would be in a Lewis structure. E.g.
2-propanol can be written as CH3CH(OH)CH3, CH3CHOHCH3,
(CH3)2CHOH.
2-butene will be written as CH3CH=CHCH3.
c. Bond-Line formula
This is the quickest of all because it only shows the carbon skeleton. In a
line-angle formula (as it is also called), bonds are represented by lines,
and carbon atoms are assumed to be present wherever two lines meet or a
line begins or ends. Nitrogen, oxygen, and halogen atoms are shown, but
hydrogen atoms are not usually drawn unless they are bonded to an atom
that is drawn. The number of H atoms necessary to fulfill the
carbon atom’s valency is assumed to be present.
6
C l
c y c lo b u ta n e
2 - c h lo r o b u ta n e
7
Nomenclature
1. Choose the longest continuous chain as the parent name.
2
6 4 1
7 5 3
2 -m e th y lp e n ta n e 3 -e th y l-2 -m e th y lh e x a n e
n o t n o t
4 -m e th y lp e n ta n e 4 -e th y l-5 -m e th y lh e x a n e 8
Unbranched alkanes can be referred to as normal with the designation
n. For example, n-hexane refers to the unbranched hexane –
CH3CH2CH2CH2CH2CH3.
Some common branched alkyl substituents include:
1-m ethylethyl CHCH3
(orisopropyl) CH3
1-methylpropyl CHCH2CH3
(orsec-butyl) CH3
CH3
1,1-dim ethylethyl C CH3
(ortert-butyl) CH3
Sec stands for secondary, while tert stands for tertiary. They can also
be represented as s and t, respectively.
9
3. Arrange the substituents alphabetically.
4. Name compound ensuring figures are separated by comma, figures
and letters separated by a hyphen. Also use the prefixes di, tri, to show
repetition of substituents. Note that prefixes such as di, tri, sec, tert, etc
do not affect alphabetical order. So dimethyl falls under m and not d in
terms of order. This however does not affect iso or cyclo prefixes (in
such cases i and c are placed accordingly in the name).
4
-
e
t
h
y
l
-
3
,
3-
d
i
m
e
t
h
yl
h
e
x
a
ne
Note: It is important that you are able to give the name of an organic
structure and also that you can draw the correct structure from the name.
Example: Draw the structure of 4-isopropyl-3,4-dimethyloctane
10
Preparation of Alkanes
1. Reduction of alkyl halides: Most alkyl halides react with Zn and
aqueous acid to produce an alkane.
R-X + Zn + HX → R-H + ZnX2
11
4. Wurtz reaction: treatment of an ethereal solution of an alkyl
halide with sodium to leads to the formation of an alkane.
CH3CH2Br + 2Na + BrCH2CH3 → CH3(CH2)2CH3 + 2NaBr
The reaction can be applied to different alkyl halides resulting in
mixed alkanes.
CH3CH2Br + 2Na + BrCH2CH2CH3 → CH3CH2CH2CH3 +
CH3(CH2)4CH3 + CH3(CH2)3CH3
12
Physical Properties of Alkanes
a. Physical state: At room temperature and pressure, C1-C4
unbranched alkanes are gases, C5-C17 unbranched alkanes are
liquids and unbranched alkanes with 18 or more C atoms are solids.
14
Reactions of Alkanes
Alkanes only have strong sigma (σ) bonds. The fact that the C- and
H-atoms of an alkane have approximately the same electronegativity
results in a roughly equal sharing of the electrons by the bonding
atoms. Thus atoms in alkanes are not partially charged and generally
neither nucleophiles nor electrophiles are attracted to them.
Consequently, alkanes are very unreactive compounds and are
referred to as paraffins (which means “little affinity” for other
compounds). Albeit, they undergo the following reactions.
15
2. Pyrolysis: also known as cracking involves heating of alkanes in the
absence of air. Pyrolysis differs from combustion as it happens in the
absence of air and does not involve compound oxidation. The
breakdown of the alkane involves generation of radicals which then
react with each other.
+C
H
3
C
H
3
+C
H3
16
3. Halogenation: Chlorination and bromination of alkanes may be
brought about by light, heat or catalysts. Iodides are prepared by treating
the chloro- or bromoderivative with sodium iodide in methanol or
acetone.
RH + X2 → No reaction in the dark or at r.t.
ℎ𝑣 𝑜𝑟 ∆
CH4 + Cl2 CH3Cl → CH2Cl2 → CHCl3 → CCl4
This reaction is a radical substitution reaction because radicals are
involved as intermediates and the end result is the substitution of a
halogen atom for one or more of the hydrogen atoms of the alkane. This
reaction gives a mixture of products which can be separated by
fractional distillation. This is a chain reaction with the following stages:
i. Chain initiating step: homolytic cleavage of halogen molecule into
radicals. The energy source for this step is the heat or light supplied.
ℎ𝑣
𝐶𝑙2 𝐶𝑙 . + 𝐶𝑙 .
17
ii. Chain propagating steps: a radical reacts to produce another radical
leading to propagation of radicals. The first propagation step
involving H-atom abstraction is the rate determining step for the
whole reaction.
𝐶𝐻4 + 𝐶𝑙 . → 𝐶𝐻3. + 𝐻𝐶𝑙
𝐶𝐻3. + 𝐶𝑙2 → 𝐶𝐻3 𝐶𝑙 + 𝐶𝑙 .
𝐶𝐻3 𝐶𝑙 + 𝐶𝐻3. → 𝐶2 𝐻6 + 𝐶𝑙 .
iii. Chain terminating steps: combination of any two radicals to form a
molecule brings the reaction to an end by reducing the number of
radicals available for propagation.
𝐶𝑙 . + 𝐶𝑙 . → 𝐶𝑙2
𝐶𝐻3. + 𝐶𝐻3. → 𝐶2 𝐻6
𝐶𝐻3. + 𝐶𝑙 . → 𝐶𝐻3 𝐶𝑙
The radical chlorination of alkanes other than methane follows the
same mechanism described above.
18
However, monochlorination of butane gives two products as shown
in the equation below.
h Cl
C H 3C H 2C H 2C H + C l2 C H 3C H 2C H 2C H 2C l + C H 3C H 2C H C H 3 + HCl
3
b u ta n e 1 -c h lo ro b u ta n e 2 -c h lo ro b u ta n e
28% 72%
19
The stability of radicals is as shown below:
R R R H
RC >RC >HC >HC
R H H H
te
rtia
ry s
eco
nda
ry p
rim
ar
y m
eth
yl
Thus in terms of stability,
C
H
C
H
C
H
3
2C
H
3>
C
H
C
3H
C
H
C
H
2
32
A secondary alkyl radical obtained by abstraction of H-atom from an
internal carbon of butane by a chlorine radical is more stable than the
primary radical formed by a hydrogen atom abstraction from a terminal
carbon. It has been experimentally determine that it is 5.0 times easier
for chlorine radical to abstract a hydrogen atom from a tertiary carbon
than from a primary carbon, and it is 3.8 times easier to abstract a
hydrogen atom from a secondary carbon than from a primary carbon.
Thus, relative rates for alkyl radical formation from chlorine radical for
primary, secondary and tertiary protons is 1.0, 3.8 and 5.0,
respectively.
20
Relative amount of product = probability (number of protons) ×
reactivity
6
Yield of 1-chlorobutane = × 100% = 28.3%
21.2
15.2
Yield of 2-chlorobutane = 21.2
× 100% = 71.7%
21
Conformation of alkanes
The temporary molecular shapes that result from rotation of groups
about single σ-bonds are called conformations of a molecule. Each
possible structure is called a conformer. An analysis of the energies
associated with a molecule undergoing rotation about a single bond
is called conformational analysis. In conformational analysis, the
Newman projection is used. In a Newman projection, an observer’s
focus in on the conformation around a particular C‒C bond by
sighting down the bond to see the arrangement of the atoms on the
carbons relative to each other. The three lines emanating from the
center of the circle represent the bonds coming from the front
carbon, with respect to the observer. The big circle in the back
represents the back carbon, and the three lines coming off the big
circle represent the bonds coming off the back carbon.
22
The two unique conformations in ethane are staggered and eclipsed,
with the staggered conformation being 11.8 kJ/mol lower than the
eclipsed and consequently the more favoured conformation.
Energy diagram for rotation in ethane. Only two of the hydrogens are shown for
23
clarity. For ethane, the rotational energy barrier is 2.9 kcal/mol.
The figure above illustrates the change in distance between the C‒H
bonds in the staggered and eclipsed conformations of ethane. A
staggered conformation of ethane is more stable than an eclipsed
conformation because the staggered conformation maximizes the
separation of the electron pairs in the molecular orbitals of the C‒H
bonds. In the eclipsed conformation, the hydrogens are closer; thus,
the repulsions of the electron pairs are greater. The increase of
energy associated with eclipsed bonds on adjacent atoms torsional
strain.
24
Now consider about the C2‒C3 bond in butane, we find that there are 6
important conformations. The structure of butane has two distinctly
different staggered conformations. In one, the two methyl groups have
a gauche conformation. In the other, the two methyl groups have an anti
conformation. In the gauche conformation, the torsional angle between
the two methyl groups is 60°. For the anti conformation, the two methyl
groups have a torsional angle of 180°. The anti and gauche
conformations of butane have an energy difference of 0.8 kcal/mole.
The anti conformation is more stable than the gauche conformation
because the two methyl groups are farther apart in the anti
conformation. Thus, the anti conformation has less van der Waals strain
than the gauche conformation. The van der Waals radius of a hydrogen
atom is 120 pm, and that of a methyl group is 200 pm - nearly twice as
large as a hydrogen. Because the methyl groups of butane are closer in
the gauche conformation than they are in the anti, the compound has
greater van der Waals strain in the gauche conformation.
25
At 25 °C, about three times as many butane molecules have the anti
conformation as the gauche conformation. The other 2 eclipsed
conformations correspond with an energy level of 14 and 24 kJ/mol
relatively higher than the minimum energy of the anti-conformation.
Steric strain (also known as Van der Waal’s strain) is the strain in a
molecule caused when two atoms or groups of atoms are forced closer
together than their atomic radii allow. Every atom or group of atoms
has a measure of size called its van der Waals radius. When two groups
that are not bonded to each other get within close distance of their van
der Waals radii, they begin repelling one another. The electrons
surrounding one group repel the electrons surrounding the other group.
The van der Waals radii indicate how close two groups can approach
each other before these electron-electron repulsions occur. Chemists
call such repulsion van der Waals strain.
C
H3
H
3C H
H H 26
H
Butane has two distinct eclipsed conformations about its C2‒C3 bond.
In one, the two methyl groups eclipse each other. In the second, each
methyl group eclipses with a hydrogen atom. Both conformations have
the same number of eclipsed bonds and the same amount of torsional
strain. However, the methyl‒methyl eclipsed conformation has
significantly more van der Waals strain than does the methyl‒hydrogen
eclipsed conformation. The greater strain arises from the larger methyl
groups that take up more space, and thus have more electron repulsion,
than the hydrogens.
28
CHM102: ALKENES
1
Introduction
Alkenes (sometimes referred to as olefins) are unsaturated hydrocarbons
in which there is at least one C‒C double bond in which each C-atom
makes use of three sp2 hybrid orbitals to form three σ bonds and both
central C-atoms use the remaining p-orbitals to form a pi bond. Acyclic
(non-cyclic) alkenes have the general formula CnH2n. The double bond is
the functional group in alkenes and is made up of a sigma and a pi bond.
The π-bond is weaker than a σ-bond. The sp2 orbital has more s character
when compared to the sp3 analogue in alkanes, hence due to the
proximity of the s orbital to the nucleus, the effective size of the sp2
orbital decreases in comparison to an sp3. Thus an sp2-s carbon-hydrogen
bond is shorter than an sp3-s carbon-hydrogen bond. The C=C bond in
ethane (1.33 Å) is shorter than the C-C bond (1.54 Å) in ethane.
Ethene is used in the ripening of foods, and in preparation of solvents
like ethylene dichloride, glycol etc. Ethene and propene are very useful
in the polymer industry in the manufacture of polyethylene,
polypropylene, polyvinylchloride, teflon etc.
2
Alkenes are also very useful in the drug and pesticide industries.
Nomenclature
Common names are still used for referring to many simple alkenes.
B
r
C
l
e
thy
le
ne p
ro
pyle
ne v
in
ylc
hlo
rid
e a
lly
lbr
omid
e
1. The IUPAC naming is the most common way of naming alkenes. The
parent compound is the longest continuous chain containing the C=C.
Simply replace the ending -ane of alkane with -ene. E.g.
3
-
p
r
o
p
y
l
-
1
-
h
e
pt
e
n
e
2. Number the parent compound from the end nearest the C=C. If even,
number to give lowest sum for substituent position.
2-methyl-4-octene
3
3. Use an appropriate prefix to indicate the stereochemistry of the alkene.
The lack of easy rotation about double bond gives rise to configurational
or geometrical isomers denoted by cis (same side) or trans (across). Cis
and trans can be used to assign the geometric isomerism in simple
disubstituted alkenes e.g.
c
i
s
-2
-b
u
t
e
ne t
r
a
ns
-2
-
b
ut
e
ne
If two similar groups bonded to the carbons of the double bond are on
the same side of the bond, the alkene is the cis isomer. If the similar
groups are on opposite sides of the bond, the alkene is trans.
4
Stability of Alkenes
Studies of numerous alkenes reveal that the greater the number of
attached alkyl groups to the double bond, the greater the stability of
the alkene. The stabilities of different alkenes as they hydrogenate to
give alkanes is determined by comparing the heats of
hydrogenation. The order is:
RRRR
R HRHRRRHHH
> >
> > > >
RRRH
R HHRHHHHHH
Question:
5
Preparation of Alkenes
1. Dehydrohalogenation of alkyl halides
Dehydrohalogenation is the removal of a hydrogen and a halogen
from an alkyl halide to form an alkene. This involves an elimination
reaction using hot alcoholic base such as ethanolic KOH or KOEt.
Details of elimination reactions would be discussed later.
H
C
l
H E t
O
H
H
C
C
CHK
O
HC
+ H
C
H
=
C
3H
2
H
H
H
In some cases, only a single product is possible, however
dehydrohalogenation of many alkyl halides yields more than one
product. For example, 2-bromo-2-methylbutane will yield two
products: 2-methyl-2-butene and 2-methyl-1-butene. Using a small
base such as ethoxide or hydroxide ion gives the major product as
the more stable alkene.
C
H
3KO
H/
E
tH C
O H
3 CH
2
H
C
H
3C
2C
CH
3 HC
3H
C C +
HC
3H
2C
C
70
°
C CH
B
r CH
3 3
2
-
m
et
h
yl
-
2-
bu
t
e
ne2-
m
et
h
yl
-
1-
bu
t
e
ne6
69
% 31
%
The transition state leading to the formation of 2-methyl-2-butene is
more stable than that of 2-methyl-1-butene (i.e. involves a lower
free energy of activation), and therefore the rate of its formation is
faster (kinetic control).
2. Dehydration of Alcohols
Heating most alcohols with a strong acid causes them to lose a
molecule of water and form an alkene. This is also an elimination
reaction and is favoured at high temperatures. Bronsted acids such
as sulphuric acid and phosphoric acid are often used in the
laboratory. Alumina could also be used at high temperatures.
H
SO C
C
H
3C
H
2H 24 H
O 2C
H
2
1
6
0
17
0°
C
M
e
c
ha
ni
s
m:
H OH
2-
HO -
H
2
C
HC
H
32O
H C
H
3C
H
2 C
HC
H
32 H
C
2CH
2
HO
H
H
CCH
HH 7
3. Dehalogenation of vicinal dihalides
Vicinal dibromides (alkyl halides with two bromines on adjacent
carbon atoms) are converted to alkenes by reduction with either iodide
ion in acetone or zinc in acetic acid.
N
aI
B
r a
ceto
ne
CC CC +I
B r+N
aB
r
Br
B
r C HCO
O
H
3
+ Z
nB
r
2
CC +
ZnC C
Br
8
Some alkynes can be reduced to give cis or trans alkene depending on
the catalyst used. H C
3 CH 3
d
n
ia
la
c
r.
t C
Cc
is
L
/
H
2
H
H
H
C
C
3CC
H
3
N
a
/
Li
q
.N
H
CH 3
H C
3 HC
C
Ht
r
an
s
3
Preparation of
Alkenes
9
Physical Properties of Alkenes
Alkenes just like other hydrocarbons are non polar organic
compounds. Alkenes with two to four carbon atoms are gases, those
with five to seventeen carbon atoms are liquids, while those with
eighteen plus carbon atoms are solids at room temperature and they
burn in air with luminous smoky flame. Alkenes are insoluble in
water but soluble in non-polar solvents. They are also less dense
than water. Alkenes have a lower boiling point than their
corresponding alkanes.
10
Reactions of Alkenes
1. Addition Reaction
The π-bond is particularly susceptible to electron-seeking reagents, i.e.
electrophiles such as positively charged ions and Lewis acids. Thus
alkenes are said to undergo electrophilic addition.
A. Symmetrical reagents:
i. Reduction with H2: Alkenes can be readily hydrogenated under
pressure in the presence of a catalyst. Raney nickel is effective at
room temperature and atmospheric pressure. Both hydrogen atoms
usually add from the same side of the molecule, this is called a syn
addition (same side or face addition).
Pt, Ni, Pd(C)
+ H2
11
The opposite of syn addition is an anti addition and an illustration of
both forms of addition is shown below.
on
C C
i t i Y
n add X
S y
C C + X Y
A n
ti a Y
dd
itio C C
n
X
12
The alkene donates a pair of electrons to the closer bromine, causing
displacement of the distant bromine atom. As this occurs, the newly
bonded bromine atom, due to its size and polarizability, donates an
electron pair to the carbon that would otherwise have been a
carbocation, thereby stabilizing the positive charge by delocalization.
The free bromide ion then attacks at the back side of the other carbon
atom in a substitution reaction, causing the ring to open and resulting
in the formation of a vicinal dibromide.
B
r
-
+B
r
B
r B
r
B
r
B
r
The addition of bromine follows an anti addition, hence the reaction
products are trans.
-
5
°C B
r
+B
r
2
C
Cl
4 B
r
13
B. Unsymmetrical reagents:
i. Hydrohalogenation: These reactions are carried out by dissolving
the hydrogen halide in a solvent such as acetic acid or DCM, or by
bubbling the gaseous HX directly into the alkene, allowing the alkene
to serve as solvent. Order of reactivity of hydrogen halides is HI>
HBr> HCl> HF, and unless the alkene is highly substituted, HCl
reacts so slowly that the reaction is not one that is useful as a
preparative method.
Addition of HX to an unsymmetrical alkene yields one major product
and this can be easily predicted using the rule formulated by Russian
Chemist Vladimir Markovnikov in 1870. The rule simply states that
in the ionic addition of an unsymmetrical reagent to a double bond,
the positive portion of the adding reagent attaches itself to a carbon
atom of the double bond so as to yield the more stable carbocation as
an intermediate.
14
-
+HB
r +B
r
B
r
n
ot
+H
Br
B
r
Carbocations (just like radicals) are intermediates that are classified
according to the number of alkyl substituents that are bonded to the
positively charged carbon. More alkyl groups bonded to a positively
charged carbon decreases the concentration of the positive charge
thereby increasing the stability of the carbocation. Tertiary
carbocations are more stable than secondary and the secondary
carbocations are more stable than primary.
RRHH
R
C
> >
H
>
R
CC
R
C
RHHH
t
e
r
t
i
a
r
ys
e
c
o
n
d
a
r
ym
p
r
i
m
a
r
ye
t
h
y
l
c
a
r
b
o
c
a
t
i
o
nc
a
r
b
o
c
a
t
io
n
c
a
r
b
o
c
a
t
i
o
n 15
When a reaction that can potentially yield two or more constitutional
isomers actually produces only one (or majorly one), the reaction is said
to be regioselective. Addition of HX to unsymmetrical alkenes is
regioselective.
H
I
+ +
I I
2
-
m
e
t
h
y
l
-
2
-
b
u
t
e
n
e 2
-
i
o
d
o
-
2
-
m
e
t
h
y
lb
u
t
a
n
e
2
-
i
od
o
-
3
-
m
e
t
h
y
l
b
ut
a
n
e
m
a
j
o
r
p
r
o
d
uc
tm
i
n
o
r
p
r
o
d
u
c
t
16
There is an exception to the Markovnikov’s rule, which occurs when
HBr is added to alkenes in the presence of peroxides (ROOR). When
alkenes are treated with HBr in the presence of peroxides, an anti-
Markovnikov addition occurs.
R
O
O
R
+
H
B
rC
H
C
HC
H
B
r
32
2
HF, HCl and HI do not give anti-Markovnikov addition even when
peroxides are present.
ii. Hydration: Addition of water to an alkene results in no reaction as
water itself is too weakly acidic to afford sufficient hydrogen
electrophile required for the reaction. However in the presence of an
acid, the reaction takes place resulting in the formation of an alcohol.
This acid catalyzed hydration (addition of water) of an alkene, often
used industrially, follows the Markovnikov’s rule and is regioselective.
17
Since acid-catalysed hydration also involves the generation of
carbocations, rearrangements leading to more stable carbocation species
take place. Strong acids such as sulphuric, hydrochloric or phosphoric
acid are often used to catalyse this reaction.
slow fast
H OH2 CH3CHCH3 + H2O CH3CHCH3
H3CHC CH2 +
OH
H
H2 O
fast
CH3CHCH3 + H3O+
OH
H
H 2O O H H2O
OH
+ Br-
Br Br Br
Br
Br
CH3
CH3 Br2/H2O
OH
Br
Organic molecules are only sparingly soluble in water as solvent.
Thus this reaction is preferrably done in a miture of organic solvent
and water using N-bromosuccinimide (NBS) as electrophilic bromine
source.
O O
H O
B
r
D
MSO
,H
2O
NB
r + N
H
+
O O
19
Note: The aromatic group does not react
2. Oxidation
Alkenes undergo a number of reactions in which the C‒C double bond
is oxidized and some of these lead to cleavage of the double bond
altogether.
A. Syn Dihydroxylation:
The addition of hydroxyl groups to an alkene double bond leading to
the formation of a glycol (1,2-diol) is called hydroxylation. This
reaction takes place using either osmium tetroxide or potassium
permanganate and in both cases a syn addition takes place involving
cyclic intermediates. Osmium tetroxide is more widely applied, though
it is highly toxic, volatile and expensive. Osmium tetroxide reacts with
alkenes in a concerted step to form a cyclic osmate ester. Hydrogen
peroxide hydrolyzes the osmate ester and reoxidizes osmium to
osmium tetroxide. Aqueous sodium sulphite or aqueous sodium
hydrogensulphite can also be used to hydrolyse the osmate ester to give
the glycol. pyridine H2O2
+ OsO4
C C C C
O O HO OH
Os
O O
Os O O
20
O O osmate ester
Methods have been developed for catalytic use of OsO4 in conjunction
with a co-oxidant such as N-methylmorpholine N-oxide (NMO).
+M
n
O HH O
H +M
n
O2
4 HH
O
O H
O
2
H
OO
H
Mn
OO
21
B. Epoxidation of Alkenes:
An epoxide is a three-membered cyclic ether, also called an oxirane.
The most widely used method for synthesis of epoxides is the reaction
of an alkene with a peroxy acid (or peracid). A commonly used peroxy
acid is meta-chloroperoxybenzoic acid (m-CPBA).
OO O
+
R
C
H
C
H R
C
H
C+
HR
C
O
H
2R
C
O
O
H 2
m
-
C
PB
A O
t
r
a
ns
-
st
i
l
l
be
ne t
r
a
ns
-
st
i
l
l
be
ne
o
x
i
de
22
More substituted alkenes epoxidizes faster and thus when 1,2-
dimethylcyclohexa-1,4-diene is treated with m-CPBA, the more
substituted alkene gets epoxidized.
m
-
C
P
B
A
O
23
C. Oxidative Cleavage of Alkenes:
i. Ozonolysis: When an alkene is treated with ozone at low temperatures,
the double bond breaks to give ketones and aldehydes. When ozone is
added to an alkene, a concerted cycloaddition reaction (the oxygen atoms
add to the two carbons in a single step) takes place leading to the
formation of an unstable molozonide which rearranges to an ozonide
intermediate. The ozonide on treatment with a reducing agent such as
zinc metal in acetic acid or dimethyl sulphide, is converted into carbonyl
compounds.
If the ozonide is cleaved by an oxidizing agent such as hydrogen
peroxide the products will be ketones and/or carboxylic acids (the
aldehyde initially gets oxidized to a carboxylic acid).
reductive workup
Zn/HOAc R R
C O + O C
or (CH3)2S R H
R R R O R
R R R C C H
C C R H
R H O O O O
O O O R R
O H2O2 C O + O C
molozonide ozonide R
oxidative workup OH 24
A typical example of an oxidative cleavage is given below.
1
.
O
3
,-
7
8°
C O
+O
2
.
Z
n/
H
OA
c
2
-
m
e
t
h
yl
-
2
-
he
x
e
n
e b
u
t
a
na
la
c
e
t
o
ne
25
End of Lecture 2
26
CHM102: ALKYNES
1
Introduction
Alkynes (also called acetylenes) are unsaturated hydrocarbons that
contain a carbon-carbon triple bond. Acyclic alkynes have the general
formula CnH2n-2. Due to their sp hybridization, they have a bond angle of
180° and so are linear. Although alkynes are not as widespread in nature
as alkenes, the chemical properties of alkynes are similar to those of
alkenes. The only difference is that there are twice as many π bonds to
react. The triple bond is made of two π bonds and one sp-sp σ bond.
There are two classes of alkynes ‒ monosubstituted (terminal) and
disubstituted (internal).
1
-
b
ut
yn
e 2
-
p
en
ty
n
e
Alkynes can also be named as substituted acetylene. Using this common
nomenclature, 1-butyne is named as ethylacetylene and 2-pentyne as
ethylmethylacetylene.
3
Preparation of Alkynes
1. From Calcium carbide: Acetylene can be prepared by the action
of water on calcium carbide, which itself is prepared by the reaction
between calcium oxide (from limestone) and coke (from coal) at the
very high temperatures of the electric furnace.
C aC2 + 2 H 2O H C C H + Ca( OH )
2
2. Dehydrohalogenation of alkyl dihalides: is particularly useful
since the dihalides themselves are readily obtained from the
corresponding alkenes by addition of halogen. This amounts to
conversion by several steps of a double bond into a triple bond.
Br
B r2 K O H , E tO H N aN H 2
Br
Br
Under mild conditions, dehydrohalogenation stops at the vinyl
halide stage; more vigorous conditions using a stronger base is
required for alkyne formation.
4
3. Reaction of sodium acetylides with primary alkyl halides:
The negative charge and unshared electron pair on carbon makes the
acetylide anion strongly nucleophilic. As a result, an acetylide anion
can react with an alkyl halide substituting the halogen group.
H H
H
CN
a+
C H
CC
l H
C
CC
H+N
a
Cl
H H
5
Physical Properties of Alkynes
Alkynes have physical properties similar to those of alkanes and
alkenes in general. They are insoluble in water but soluble in
organic solvents with low polarity such as benzene and ether. They
are less dense than water and, like other homologous series, have
boiling points that increase with increasing molecular weight.
Internal alkynes have higher boiling points than terminal alkynes.
Substituted alkynes have small dipole moments due to differences in
electronegativity between the triple-bonded carbon atoms, which are
sp hybridized, and the single-bonded carbon atoms, which are sp3
hybridized.
6
Reactions of Alkynes
1. Addition reaction: Addition of hydrogen, halogens, and hydrogen
halides to alkynes is similar to addition to alkenes, except that here two
moles of reagent is required per triple bond. it is however possible, by
proper selection of conditions, to limit reaction to the first stage of
addition, formation of alkenes. YZ
YZ CC
CC + YZ CC
YZ YZ
2. Reduction to Alkenes: Controlled reduction of alkynes to alkenes is
possible. Predominantly trans-alkene is obtained by reduction of alkynes
with sodium or lithium in liquid ammonia. Almost entirely cis-alkene is
obtained by hydrogenation of alkynes with several different catalysts
such as Lindlar's catalyst. Na, liq. NH 3 H C 2H 5
C 2H 5 H
C 2 H 5 C CC 2 H 5
C 2H 5 C 2H 5
H H 7
H 2 , Lindlar cat.
3. Reactions of acidic hydrogen: Terminal alkynes are weakly acidic.
The average distance of a 2s electron from the nucleus is less than the
average distance of a 2p electron from the nucleus. Therefore, the
electrons in an sp hybrid orbital (50% s character) are closer, on
average, to the nucleus than those in an sp2 hybrid orbital (33.3% s
character). The sp hybridized carbon is more electronegative. Hence
an alkyne attracts the electrons towards itself and therefore a terminal
H can be readily removed as H+ resulting in an acetylide ion.
Addition of terminal alkyne to sodamide dissolved in ether yields
ammonia and sodium acetylide.
H
C
C
C
H
3+
N
a
NH
2H
3N
a
C
C
C
+N
H
3
Terminal alkynes react with certain heavy metal ions, mainly Ag+ and
Cu+, to form insoluble acetylides. When a terminal alkyne is passed
into ammoniacal silver nitrate solution, silver acetylide (white) is
precipitated. This reaction can be used to differentiate
terminal alkynes from non-terminal alkynes.
8
4. Hydration of alkynes: Passage of alkynes into dilute sulphuric
acid in presence of mercuric sulphate as catalyst results in the
addition of one molecule of water to the alkyne leading to the
formation of either an aldehyde or a ketone.
H 2S O 4
+ H 2O R C CH2 R C CH3
R C CH
H gSO 4 OH O
enol k e to n e
9
A structure with OH attached to double bond carbon is called an enol
(ene for alkene, -ol for alcohol). The vinyl alcohol (enol) expected as
product for this reaction is not obtained, rather the enol intermediate
is transformed into the keto. There is an equilibrium between the two
keto and enol structures, this equilibrium is called tautomerism. The
equilibrium generally lies very much in favour of the keto form.
Compounds whose structures differ markedly in arrangement of
atoms, but which exist in equilibrium, are called tautomers.
10
Concept of double bond equivalence
The Double Bond Equivalence (DBE) is the number of pairs of hydrogen
atoms that must be subtracted from the molecular formula of the
corresponding alkane to give the molecular formula of the compound.
12
End of Lecture 3
13
CHM102: ALKYL HALIDES
1
Introduction
Organic compounds which have halogen atoms bonded to a carbon atom
are called organohalogens. There are three major classes of organo-
halogen compounds: the alkyl halides, which simply have a halogen
atom bonded to one of the sp3 hybrid carbon atoms of an alkyl group; the
vinyl halides, which have a halogen atom bonded to one of the sp2 hybrid
carbon atoms of an alkene; and the aryl halides, which have a halogen
atom bonded to one of the sp2 hybrid carbon atoms of an aryl group.
The arrangement of groups around the carbon atom in alkyl halides (or
haloalkanes) is tetrahedral. Since halogens are more electronegative than
carbon, the carbon‒halogen bond of alkyl halides is polarized. The
carbon‒halogen bond length increases while the bond strength decreases
down the group. Alkyl halides are used as solvents for relatively non-
polar compounds, and they are used as starting materials in the synthesis
of many compounds.
- +
C
X 2
Alkyl halides simply have one of the H-atoms of an alkane replaced by a
halogen atom, e.g. CH3Cl and CH3CH2CH2I.
Alkyl halides can be classified as primary (1°), secondary (2°), or
tertiary (3°) based on the substitution at the carbon atom bearing the
halogen. If the carbon atom that the halogen is directly attached to is
bonded to not more than one carbon atom, then the alkyl halide is
primary. If the carbon bearing the halogen is also attached to two carbon
atoms, then the alkyl halide is secondary. Similarly, when the carbon
bearing the halogen is attached to three other carbon atoms, then the
carbon is a tertiary carbon and the alkyl halide is tertiary.
HH HC
lH C
H3
H
C CB
r HCCCH H
C
3 CB
r
HH HHH C
H3
1
°a
l
kylh
al
i
d e 2
°a
l
kylh
al
i
d e 3
°a
l
kylh
al
i
d e
3
Nomenclature
Alkyl halides are simply represented as RX with the general formula
CnH2n+1X (for a monohalide) where R is an alkyl group.
Common names are used for simple alkyl halides. E.g.
CH3I – Methyl iodide
CH3CH2Cl – Ethyl chloride
CH3CH2CH2Br – Propyl bromide
Using the IUPAC nomenclature, the halogen group comes first and then
this is followed by the alkane from which the alkyl group is derived.
CH3CHBrCH3 – 2-bromopropane
CH3CH(Cl)CH(CH3)CH2CH3 – 2-chloro-3-methylpentane
When the parent chain has both a halo and alkyl substitutent attached to
it, number the chain from the end nearer the first substituent (halo or
alkyl)
4
Preparation of Alkyl Halides
1. From Alcohols
Alcohols react with a variety of reagents to yield alkyl halides. The
most commonly used reagents are hydrogen halides (order of
reactivity is HI > HBr > HCl, HF is generally unreactive),
phosphorus tribromide and thionyl chloride. Some examples of
these reactions are shown below.
CH3CH2CH2CH2OH (or NaBr, H2SO4)
+ c. HBr CH3CH2CH2CH2Br + H2O
OH Cl
+ SOCl2 + SO2 +HCl
5
2. Halogenation of Alkanes
Alkanes react with the first three members of the halogen family
(fluorine, chlorine and bromine) to give a mixture of haloalkanes
and hydrogen halide. Alkanes do not really react with iodine. The
reaction of an alkane with a halogen is a substitution reaction called
halogenation. A halogen atom replaces one or more of the halogen
atoms of the alkane.
CH3 heat, CH3
H3C C CH3 + Cl2 H3C C CH2Cl
or light, h
CH3 CH3
2,2-dimethylpropane 1-chloro-2,2-dimethylpropane
6
3. Addition of Hydrogen Halides to Alkenes
Hydrogen halides add to the double bond of alkenes. These additions
are sometimes carried out by dissolving the hydrogen halide in a
solvent such as acetic acid or dichloromethane, or by bubbling the
gaseous hydrogen halide directly into the alkene, using the alkene
itself as solvent.
+
H
Br
B
r
In unsymmetrical alkenes, this addition follows the Markovnikov rule
and for cases where HBr is used, the introduction of a peroxide would
result in an anti-Markovnikov addition product.
7
Physical Properties of Alkyl Halides
Alkyl halides generally have low solubility in water but they are
miscible with each other. Dichloromethane (CH2Cl2, also called
methylene chloride), trichloromethane also called chloroform
(CHCl3) and tetrachloromethane (CCl4, also called carbon
tetrachloride) are often used as solvents for not so polar compounds.
Many chloroalkanes have cumulative toxicity and are carcinogenic
and so should only be used in the fumehood.
Iodomethane is the only monohalomethane that is a liquid at room
temperature. Bromoethane and iodoethane are both liquids but
chloroethane is a gas. In general, higer chloro-, bromo-, and
iodoalkanes are all liquids and tend to have boiling points near those
of alkanes of similar molecular weights.
8
Reactions of Alkyl Halides
1. Nucleophilic Substitution: Alkyl halides commonly undergo
nucleophilic substitution reaction. In this type of reaction a
nucleophile, a specie (organic or inorganic, charged or neutral) with an
unshared electron pair, reacts with an alkyl halide (called the
substrate) by replacing the halogen. A substitution reaction takes place
and the halogen substituent, called the leaving group, departs as a
halide ion. The carbon‒halogen bond of the substrate undergoes
heterolysis, and the unshared electron pair of the nucleophile is used
to form a new bond to the carbon atom.
N
u
+
R
XRN
u
+
X
The question then arises: when does the carbon‒halogen bond break?
Does it break at the same time the new bond between the nucleophile
and the carbon forms? Or does the carbon‒halogen bond break
first?
9
Some reactions of alkyl halides include the following:
X+
R O
H R OH+ X
a
lc
oho
l
X+
R N
H3 R N
H2+ H
X
a
min
e
X+
R O
R R OR+ X
e
the
r
X+
R I RI + X
a
lk
ylio
did
e
Other nucleophiles include CN-, RC≡C-, N3-, SH-, RCOO-. To better
understand these reactions of alkyl halides, it is important to understand
the mechanism of the reactions. Does the reaction take place in one step
or more? Which intermediates are formed? Which steps are fast and
which are slow?
10
Mechanism of Nucleophilic Substitution Reaction of Alkyl
Halides
There are two types of possible substitution mechanisms:
A. Unimolecular Mechanism
If the rate equation for a substitution reaction is first order with
respect to one of the reactants (in this case the alkyl halide) in the
slowest step of the reaction called the rate determining step, such a
substitution reaction is called a substitution nucleophilic unimolecular
reaction. A general representation is presented below.
O
v
e
r
al
l
: +
R
B
r O
H R
O
H+B
r
E
l
e
men
t
a
ry
st
e
ps r s
: R
B l
o
w +
RBr
f
a
st
+
ROH R
O
H
rate = k[RBr]
As shown above, the first step involves heterolytic cleavage of the
carbon-bromine bond leading to a carbocation formation.
11
The stability of carbocation (earlier discussed) enhances the reaction.
Thus, the order of reactivity of alkyl halides to SN1 reaction is
3° > 2° > 1° > CH3X
A typical example of an SN1 reaction is
C
H3
CH
3
H
2O
O
ve
rall: H
3CCBr + O
H H
3CCOH+ B
r
C
H3
CH
3
C
H3
C
H3
S
te
ps: s
lo
w
H
3CCBr H
3CC + B
r T
heion
sar
e s
olva
ted(
a n
dsta
biliz
ed)
C
H b
ywate
rmole
cule
s
C
H3 3
C
H3 CH
3
HCC + fa
st HCCOH
3 O
H 3
C
H3 CH
3
12
B. Bimolecular Mechanism
In this case the reaction is second order overall. This means that two
species are involved in the rate determining step of the reaction. This
type of substitution reaction is called a substitution nucleophilic
bimolecular reaction. A general representation is presented below.
O
v
er
al
l: R
CH
2r +O
B H R
CH
2O
H+B
r
R R
R
Br H
OC +B
r
M
e
ch
an
i
sm: O
H+ OC B
H r
HH H
HH H
t
ran
si
ti
ons
t
ate
r
ate=
k[
R C
HB
2r
][
O H]
13
For SN2 reactions, it has been experimentally determined that the order
of reactivity is
CH3X > 1° > 2° > 3°
This trend in reactivity is largely due to steric hindrance i.e. the alkyl
groups around the central carbon atom serve as an obstruction to an
incoming group. Thus, primary alkyl halides have the best reactivity in
general.
14
2. Elimination:
Elimination reaction of alkyl halides are important reactions that
compete with substitution reactions. In an elimination reaction the
fragments of some molecule are removed from adjacent atoms of the
reactant. This elimination leads to the introduction of a multiple bond.
XY
C
C
X
Y
Dehydrohalogenation is a widely used method for synthesizing alkenes
and it involves the removal of HX from adjacent atoms of an alkyl
halide. The reaction usually takes place by heating the alkyl halide with
a strong base. Similar to what obtains with substitution reactions,
elimination also involves a leaving group and an attacking Lewis base
that possess and electron pair. The overall transformation leading to the
alkene is called a 1,2-elimination or a β-elimination. Bases used for
dehydrohalogenation include KOH in ethanol, NaOEt in ethanol,
KOBut and NaOH.
15
Chloroalkanes, bromoalkanes and iodoalkanes all undergo elimination
to form alkenes. A general representation of the reaction is:
H
C C + + H B+ X
B
Xb ase
E.g.
E
tOH
,55°
C
C
H3CH
C H
3 + N
aOC
2H5 H
3CCC2 +N
H aBr + C
2HO
5 H
H
Br
C
H3 C
H3
HCCBr + N
aOCH E
tOH
,55°
C
2 5 +N
3 aBr + C
2HO
5 H
C
H3 H
3C C
H2
16
Mechanism of Elimination Reaction of Alkyl Halides
There are two types of possible elimination mechanisms:
A. Unimolecular Mechanism
E1 stands for elimination, unimolecular (1st order) reaction mechanism.
E1 eliminations, like SN1 substitutions, begin with unimolecular
dissociation (in the rate determining step), but the dissociation is
followed by loss of a proton from the ꞵ-carbon as a result of a base
abstraction.
C H 3 C H 3
O v e r a ll: H 3 C C C l + H O H 3 C C O H + H 3 O + C l
2
C H 3 C H 3
C H 3 C H 3
M e c h a n is m : s lo w
H 3 C C C l H 3 C C + C l T h e io n s a r e s o lv a te d ( a n d s ta b iliz e d )
C H b y w a te r m o le c u le s
C H 3 3
C H 3 C H 3
H C C fa s t H C C + H O H
3 + O H 3
H C H H C H 2 H
H
Rate = k[RX] 17
E1 and SN1 normally occur in competition, whenever an alkyl halide is
treated in a protic solvent with a nonbasic, poor nucleophile.
Note: The best E1 substrates are also the best SN1 substrates, and
mixtures of products are usually obtained.
E1 reactions are favoured with substrates that can form stable
carbocations, poor nucleophiles (weak bases) and use of polar solvents.
In most unimolecular reactions the SN1 reactions is favoured over the
E1 reaction, especially at low temperatures. Increasing the temperature
of the reaction favours reaction by the E1 mechanism at the expense of
the SN1 mechanism.
18
B. Bimolecular Mechanism
Elimination bimolecular (E2) reactions of alkyl halides have a
transition state for the rate determining step involving both the alkyl
halide and the base. The rate equation is first order in each reactant and
second order overall. A typical example of an E2 reaction is shown
below.
O
ve
rall: C
2HO+
5
C
HC
3 H
Br
C H
3 H
2CC
HC3 +C
H 2HO
5 H+ B
r
M
ec
han
is
m : C
2HO
5 H C
H3 C
2HOH C
5 H3 H C
H3
H H C + CHO H+B
r
2 5
H
H Br H
H B
r H H
Rate = k[CH3CHBrCH3][C2H5O-]
In the transition state, the double bond is partially formed while the
bond between hydrogen and the β-carbon, and the bond between
carbon and bromine are partially broken.
19
Grignard Reagents:
One of the applications of alkyl halides is in their use in the synthesis of
organometallic compounds. Alkyl halides react with some metals in
ether or tetrahydrofuran to form organometallic compounds (such as
organozinc, organolithium and organomagnesium compounds). While
alkyl halides are electrophiles (with the carbon carrying the halide
having a δ+ charge), their organometallic derivatives are nucleophiles
(with the carbon linked to the metal having a δ- charge.
Grignard reagents are organomagnesium compounds with the general
formula RMgX (where X = Cl, Br or I), which are very reactive and
versatile compounds. These reagents are popular in synthetic chemistry
for their usefulness in forming carbon-carbon bonds. A Grignard reagent
is prepared by reacting an alkyl halide with magnesium turnings in dry
ether. These reagents were discovered by French Chemist Victor
Grignard who won the Nobel prize in Chemistry in 1912 for this work.
d
r
y
d
i
e
t
h
yl
e
t
h
e
r
3 C
+
C
H
I
M
g H
M
g
3I
o
r
T
H
F
20
RX can be alkyl, vinyl or aryl halide (Cl, Br or I)
Synthetic applications of Grignard reagent include the following:
a. Alkane formation:
Grignard reagent are very strong bases. They abstract proton from
water, alcohols and terminal alkynes.
HO
2
R
M
g
X RH
R
X
R
M
g
X
R
R
b. Alcohol formation:
This is arguably the most useful application of Grignard reagents. It
involves the reaction of Grignard reagent with carbonyl compounds.
The general mechanism of the reaction is as presented below:
R R
-
+ hy
d
r
o
l
y
s
es
+
+
R
M
g
X +
O O
M
g
XH
O
3 O
H
-
Grignard reagents react with formaldehyde to give primary
alcohols
H
C
H
O
+R
C
H
O
2H
R
M
g
X
21
m
e
t
h
a
n
a
l1
°
a
l
c
o
h
ol
Grignard reagents react with higher aldehydes to give secondary
alcohols
C
H
3
C
H
C
H
+OR
C
H
O
H
R
M
g
X
3
e
t
h
a
nl2
a°
a
l
c
o
h
o
l
Grignard reagents react with ketones to give tertiary alcohols
OC
H
3
+ R
R
M
g
X
C
O
H
C
H
3
3
°
a
l
c
o
h
ol
Grignard reagents react with esters to give tertiary alcohols
O R
+
2
R
M
g
X R
'
C
O
H
R
'O
E
t
R
3
°
a
l
c
oh
o
l
Also, Grignard reagents react with epoxides to give alcohols
O
RMgX + R C C OH
22
c. Ketone formation:
Grignard reagents react with acid chlorides to give ketones.
O O
R
MX+R
g ' C
l R
' R
23
End of Lecture 4
24
TRANSITION METALS
Winston Doherty
CHEM DEPT, OAU Ife
These are called the inner transition
elements, and they belong here
Electron Configuration of the 1st row
Credit:
Chang: Essential
concepts
METALLIC PROPERTIES &
CATIONS FORMATION
. All are metals
. possess strong metallic bonds
. Loose electron in 4s orbitals
1st & then from the 3d orbitals
Oxidation …most
states of the stable
first-row oxidation
transition numbers
metals. are in red
COLOURED IONS…aqueous solutions of some
transition metal ions
…ions with
partially filled
d-orbitals
tend to be
coloured.
Credit: Blackman
Complexes & Ligands
Ligand Formula Name of ligand
Bidentate
stable complexes.
SHAPES….governed by number of ligands
around the central ion.
…based on electron pair repulsion theory
…change of ligand can affect the shape.
Coordination Number
Coordination No. Shape Example
…..a change of
ligand can affect
6 (six fold) Octahedral [Co(NH3)6]3+ [Co(H2O)6]2+ the coordination
number.
4 (fourfold) Tetrahedral [CuCl4]2-
repelled by a magnetic field and hence tends to set itself at right angles to the
moments on individual atoms become aligned & all point in the same direction.
Selenium Se8
Sulphur S8
Tellurium Te
𝑯𝒆 𝟐𝑺𝟐 𝟐𝑷𝟒
𝑵𝒆 𝟑𝑺𝟐 𝟑𝑷𝟒
Shape: Bent
WHY: H-M (M= O, S, Se, Te) bond length increases down d grp.
Thermal stability: H2O < H2S < H2Se < H2Te < H2Po
Reducing character : H2O < H2S < H2Se < H2Te < H2Po
..all the elements form oxides
FORMATION OF OXIDES
The oxides of the
elements in the same . e.g. SO2
oxidation state become
less acidic as we go
(acidic); TeO2
down the group. (amphoteric))
Monoxides MO – TRIOXIDES: S, Se
except Se, all other and Te form the
elements give MO trioxides of MO3
(SO, TeO, PoO) type.
REDUCING CHARACTER
The reducing Reason : O has a
character of the strong + field that
dioxides decreases attracts the hydroxyl
as we go down the group & the removal
group. of H+ becomes easy
Fluorine
compounds with e.g OF2 used
oxygen are called as rocket fuel
fluoride of oxygen
FORMATION OF HALIDES
MX2, MX4 and MX6 M = Grp 16 elements
Halide's stability decreases in the order F->Cl->Br->I-
shape.
FOMATION OF MX6 (M = S, Se, Te)
Among hexa
halides, M show maximum
fluorides most covalency of six
stable due to using their d-
steric reasons. orbitals.
MF6 - colourless MF6 are stable; stability
gases, M is Sp3d2 decreases from SF6 to
hybridized & TeF6 due to the
structure - increase in size from S
octahedral. to Te atom.
TETRAHALIDES
…prepared by direct rxn between the element and X2 molecules.
𝑀 + 2𝑋2 → 𝑀𝑋4
.
𝑀 = 𝑆, 𝑆𝑒, 𝑇𝑒
.
OXIDES
…the compounds of oxygen & other elements
.
OZONE …. Prepared by
Rhombic ⇌ Monoclinic
…2 forms have S8 molecules & has crown shape
..another allotrope of sulphur
…cyclo S6 adopts a chair form
…rxn is exothermic; low temp & high pressure favour the rxn
SO3(g) + H2SO4 →H2S2O7 (Oleum)
1
Carbohydrates are polyhydroxy aldehydes or ketones, or substances that yield such compounds on hydrolysis. Most
substances of this class have empirical formulas suggesting that they are carbon "hydrates," in which the ratio of
C : H : O is 1: 2 : 1. For example, the empirical formula of glucose is C6H12O6, which can also be written (CH2O)6 or
C6(H2O)6. Although many common carbohydrates conform to the empirical formula (CH2O)n, others do not; some
carbohydrates also contain nitrogen, phosphorus, or sulfur
There are three major size classes of carbohydrates: monosaccharides, oligosaccharides, and polysaccharides (the word
"saccharide" is derived from the Greek sakkharon, meaning "sugar").
Monosaccharides, or simple sugars, consist of a single polyhydroxy aldehyde or ketone unit. The most abundant
monosaccharide in nature is the six carbon sugar D-glucose.
2
Monosaccharides
Monosaccharides are colorless, crystalline solids that are freely soluble in water but insoluble in nonpolar
solvents. Most have a sweet taste. The backbone of monosaccharides is an unbranched carbon chain in which all
the carbon atoms are linked by single bonds. One of the carbon atoms is double-bonded to an oxygen atom to
form a carbonyl group; each of the other carbon atoms has a hydroxyl group. If the carbonyl group is at an end of
the carbon chain, the monosaccharide is an aldehyde and is called an aldose; if the carbonyl group is at any other
position, the monosaccharide is a ketone and is called a ketose. The simplest monosaccharides are the two three-
carbon trioses: glyceraldehyde, an aldose, and dihydroxyacetone, a ketose.
Monosaccharides with four, five, six, and seven carbon atoms in their backbones are called, respectively,
tetroses, pentoses, hexoses, and heptoses. There are aldoses and ketoses of each of these chain lengths:
aldotetroses and ketotetroses, aldopentoses and ketopentoses, and so on.
3
4
5
6
7
8
9
10
11
12
13
Reactions of Monosaccharides
14
15
16
17
18
Ester and Ether Formation
The -OH groups on a monosaccharide can be readily converted to esters and ethers. Esterification can be done with
an acid chloride or acid anhydride, while treatment with an alkyl halide leads to the ether
19
Summary of reactions
20
Formation of glycosides
The hydroxyl group that is attached to the anomeric carbon atom (i.e., the carbon containing the aldehyde or keto
group) of carbohydrates in solution has unusual reactivity, and derivatives, called glycosides, can be formed;
glycosides formed from glucose are called glucosides. It is not possible for equilibration between the α- and β-
anomers of a glycoside in solution (i.e., mutarotation) to occur. The reaction by which a glycoside is formed
involves the hydroxyl group (―OH) of the anomeric carbon atom (numbered 1) of both α and β forms of D-
glucose—α and β forms of D-glucose are shown in equilibrium in the reaction sequence—and the hydroxyl group
of an alcohol (methyl alcohol in the reaction sequence); methyl α-D-glucosides and β-D-glucosides are formed as
products, as is water.
21
Disaccharides
Disaccharides are a specialized type of glycoside in which the anomeric hydroxyl group of one sugar has
combined with the hydroxyl group of a second sugar with the elimination of the elements of water.
Sucrose, or common table sugar, its world production had amounted to more than 170 million tons annually. The
unusual type of linkage between the two anomeric hydroxyl groups of glucose and fructose means that neither a
free aldehyde group (on the glucose moiety) nor a free keto group (on the fructose moiety) is available to react
unless the linkage between the monosaccharides is destroyed; for this reason, sucrose is known as a
nonreducing sugar.
22
Maltose, or malt sugar, is a disaccharide formed by a dehydration reaction between two glucose molecules.
23
Polysaccharides
A long chain of monosaccharides linked by glycosidic bonds is known as a polysaccharide (poly– = “many”). The
chain may be branched or unbranched, and it may contain different types of monosaccharides. The molecular
weight may be 100,000 daltons or more depending on the number of monomers joined. Starch, glycogen,
cellulose, and chitin are primary examples of polysaccharides.
Starch is the stored form of sugars in plants and is made up of a mixture of amylose and amylopectin (both
polymers of glucose).
Starch is made up of glucose monomers that are joined by α 1-4 or α 1-6 glycosidic bonds. The numbers 1-4 and
1-6 refer to the carbon number of the two residues that have joined to form the bond. As illustrated in Figure below
amylose is starch formed by unbranched chains of glucose monomers (only α 1-4 linkages), whereas amylopectin
is a branched polysaccharide (α 1-6 linkages at the branch points)
24
25
Cellulose is the most abundant natural biopolymer. The cell wall of plants is mostly made of cellulose; this
provides structural support to the cell. Wood and paper are mostly cellulosic in nature. Cellulose is made up of
glucose monomers that are linked by β 1-4 glycosidic bonds
As shown in Figure below, every other glucose monomer in cellulose is flipped over, and the monomers are
packed tightly as extended long chains. This gives cellulose its rigidity and high tensile strength—which is so
important to plant cells. While the β 1-4 linkage cannot be broken down by human digestive enzymes, herbivores
such as cows, koalas, buffalos, and horses are able, with the help of the specialized flora in their stomach, to
digest plant material that is rich in cellulose and use it as a food source.
26
Thank you
27
FATS AND OILS
By:
Dr. I. O. Otemuyiwa
Dept of Chemistry
Obafemi Awolowo University, Ile-Ife, Nigeria
Delta Nomenclature
Chemists use Delta Nomenclature, but nutritionists are more focused on the Omega system which
focuses on the nutritional value of the fatty acid. For Delta Nomenclature one needs to know 3 things:
Number of carbons in the fatty acid
Number of double bonds
Number of carbons from the carboxylic acid (alpha) end to the first carbon in the double bond(s)
Fatty acid where the double bond is at the ninth carbon from the end (omega)
Table: Common names of fatty acids[1]
If all three OH groups on the glycerol molecule are esterified with the same fatty acid, the resulting ester is called
a simple triglyceride. However, a typical triglyceride obtained from naturally occurring fats and oils contains two or three
different fatty acid components and is thus termed a mixed triglyceride.
A triglyceride is called a fat if it is a solid at 25°C; it is called an oil if it is a liquid at that temperature. These differences in
melting points reflect differences in the degree of unsaturation and number of carbon atoms in the constituent fatty acids.
Triglycerides obtained from animal sources are usually solids, while those of plant origin are generally oils. Therefore, we
commonly speak of animal fats and vegetable oils.
Physical Properties of Fats and Oils
Contrary to what you might expect, pure fats and oils are colorless, odorless, and tasteless. The characteristic colors,
odors, and flavors that we associate with some of them are imparted by foreign substances that are lipid soluble and have
been absorbed by these lipids. For example, the yellow color of butter is due to the presence of the pigment carotene; the
taste of butter comes from two compounds—diacetyl and 3-hydroxy-2-butanone—produced by bacteria in the ripening
cream from which the butter is made.
Fats and oils are lighter than water, having densities of about 0.8 g/cm3. They are poor conductors of heat and electricity
and therefore serve as excellent insulators for the body, slowing the loss of heat through the skin.
Chemical Reactions of Fats and Oils
Saponification - The hydrolysis of fats and oils in the presence of a base is used to make soap and is
called saponification.
Hydrogenation – fat and oil react with hydrogen in presence of Nickel catalyst to form saturated fat called Margarine
Oxidation/Antioxidants
Oxidation (exposure to air) causes rancidity in fats over time. Fats and oils that are in contact with moist air at room
temperature eventually undergo oxidation and hydrolysis reactions that cause them to turn rancid, acquiring a
characteristic disagreeable odor. This is made worse by combination with certain metals, such as copper.
One cause of the odor is the release of volatile fatty acids by hydrolysis of the ester bonds. Butter, for example, releases
foul-smelling butyric, caprylic, and capric acids. Microorganisms present in the air furnish lipases that catalyze this
process. Hydrolytic rancidity can easily be prevented by covering the fat or oil and keeping it in a refrigerator.
Another cause of volatile, odorous compounds is the oxidation of the unsaturated fatty acid components, particularly the
readily oxidized structural unit in polyunsaturated fatty acids, such as linoleic and linolenic acids. One particularly
offensive product, formed by the oxidative cleavage of both double bonds in this unit, is a compound
called malonaldehyde.
This oxidation can be minimized by the addition of antioxidants. Antioxidants are compounds whose affinity for oxygen is
greater than that of the lipids in the food; thus they function by preferentially depleting the supply of oxygen absorbed into
the product. Some oils contain natural antioxidants, such as tocopherols (vitamin E is one kind), but these are often
destroyed during the processing. As a result, manufacturers add synthetic antioxidants to retard rancidity. BHA and BHT
are synthetic antioxidants commonly used by fat manufacturers.
Cleansing action of Soap
Dirt and grime usually adhere to skin, clothing, and other surfaces by combining with body oils, cooking fats, lubricating
greases, and similar substances that act like glues. Because these substances are not miscible in water, washing with water
alone does little to remove them. Soap removes them, however, because soap molecules have a dual nature. One end, called
the head, carries an ionic charge (a carboxylate anion) and therefore dissolves in water; the other end, the tail, has a
hydrocarbon structure and dissolves in oils. The hydrocarbon tails dissolve in the oil; the ionic heads remain in the aqueous
phase, and the soap breaks the oil into tiny soap-enclosed droplets called micelles, which disperse throughout the solution.
The droplets repel each other because of their charged surfaces and do not coalesce. With the oil no longer “gluing” the dirt
to the soiled surface (skin, cloth, dish), the soap-enclosed dirt can easily be rinsed away.
Chemistry of Amines
By:
Dr. I. O. Otemuyiwa
Dept of Chemistry
Obafemi Awolowo University, Ile-Ife, Nigeria
1
Amines are organic compounds which contain and are often actually based on one or more atoms of nitrogen.
Structurally amines resemble ammonia in that the nitrogen can bond up to three hydrogens, but amines also have
additional properties based on their carbon connectivity. In an amine, one or more of the hydrogen atoms from
ammonia are replaced by organic substituents like alkyl (alkane chain) and aryl (aromatic ring) groups.
Types of amines
Amines can be either primary, secondary or tertiary, depending on the number of carbon-containing groups that are
attached to them.
If there is only one carbon-containing group (such as in the molecule CH3NH2) then that amine is considered
primary. Two carbon-containing groups makes an amine secondary, and three groups makes it tertiary.
Utilizing the lone electron pair of nitrogen, it is sometimes energetically favored to use the nitrogen as a nucleophile
and thus bind a fourth carbon-containing group to the amine. In this case, it could be called a quaternary
ammonium ion.
2
General properties
Hydrogen bonding significantly influences the properties of primary and secondary amines as well as the
protonated derivatives of all amines. Thus the boiling point of amines is higher than those for the corresponding
phosphines (compounds containing phosphorus), but generally lower than the corresponding alcohols. Alcohols,
or alkanols, resemble amines but feature an -OH group in place of NR2. Since oxygen is more electronegative
than nitrogen, RO-H is typically more acidic than the related R2N-H compound.
Methyl, dimethyl, trimethyl, and ethyl amines are gases under standard conditions. Most common alkyl amines
are liquids, and high molecular weight amines are, quite naturally, solids at standard temperatures. Additionally,
gaseous amines possess a characteristic ammonia smell, while liquid amines have a distinctive “fishy” smell.
Most aliphatic amines display some solubility in water, reflecting their ability to form hydrogen bonds. Solubility
decreases relatively proportionally with the increase in the number of carbon atoms in the molecule – especially
when the carbon atom number is greater than six. Aliphatic amines also display significant solubility in organic
solvents, especially in polar organic solvents. Primary amines react readily with ketone compounds (such
as acetone), however, and most amines are incompatible with chloroform and also with carbon tetrachloride as
solvent solutions. 3
Properties as bases
When evaluating the basicity of a nitrogen-containing organic functional group, the central question we need to
ask ourselves is: how reactive (and thus how basic) is the lone pair on the nitrogen? In other words, how much
does that lone pair want to break away from the nitrogen nucleus and form a new bond with a hydrogen?
Like ammonia, amines act as bases and are reasonably strong (see the provided table for some examples of
conjugate acid Ka values). The basicity of amines varies by molecule, and it largely depends on:
The availability of the lone pair of electrons from nitrogen
The electronic properties of the attached substituent groups (e.g., alkyl groups enhance the basicity, aryl groups diminish
it, etc.)
The degree of solvation of the protonated amine, which depends mostly on the solvent used in the reaction
The nitrogen atom of a typical amine features a lone electron pair which can bind a hydrogen ion (H+) in order
to form an ammonium ion — R3NH+. The water solubility of simple amines is largely due to the capability for
hydrogen bonding that can occur between protons on the water molecules and these lone pairs of electrons. 4
Comparing the basicity of alkyl amines to ammonia
Because alkyl groups donate electrons to the more electronegative nitrogen. The inductive effect makes the
electron density on the alkylamine’s nitrogen greater than the nitrogen of ammonium. Correspondingly, primary,
secondary, and tertiary alkyl amines are more basic than ammonia.
In fact, when and amide is reacted with an acid, the protonation occurs at the carbonyl oxygen and not the
nitrogen. This is because the cation resulting from oxygen protonation is resonance stabilized. The cation
resulting for the protonation of nitrogen is not resonance stabilized.
5
Reactions of Amines
Due to the unshared electron pair, amines can act as both bases and nucleophiles.
Reaction with acids
When reacted with acids, amines donate electrons to form ammonium salts.
6
Aldehydes and ketones react with primary amines to give a reaction product (a carbinolamine) that dehydrates to
yield aldimines and ketimines (Schiff bases).
7
Reaction with nitrous acid
Nitrous acid is unstable and must be prepared in the reaction solution by mixing sodium nitrite with acid.
Primary amines react with nitrous acid to yield a diazonium salt, which is highly unstable and degradates into a
carbocation that is capable of reaction with any nucleophile in solution. Therefore, reacting primary amines with
nitrous acid leads to a mixture of alcohol, alkenes, and alkyl halides.
8
Amino acids and Proteins
By:
Dr. I. O. Otemuyiwa
Dept of Chemistry
Obafemi Awolowo University, Ile-Ife, Nigeria 1
Proteins, from the Greek proteios, meaning first, are a class of organic compounds containing Carbon, Hydrogen, Oxygen
and Nitrogen. They are present in and vital to every living cell. In the form of skin, hair, callus, cartilage, muscles, tendons
and ligaments, proteins hold together, protect, and provide structure to the body of a multi-celled organism. In the form of
enzymes, hormones, antibodies, and globulins, they catalyze, regulate, and protect the body chemistry. In the form of
hemoglobin, myoglobin and various lipoproteins, they effect the transport of oxygen and other substances within an
organism. Proteins are generally regarded as beneficial, and are a necessary part of the diet of all animals. Humans can
become seriously ill if they do not eat enough suitable protein, the disease kwashiorkor being an extreme form of protein
deficiency.
2
Amino acid structure and its classification
An amino acid contains both a carboxylic group and an amino group. Amino acids that have an amino
group bonded directly to the alpha-carbon are referred to as alpha amino acids.
Every alpha amino acid has a carbon atom, called an alpha carbon, Cα; bonded to a carboxylic
acid, –COOH group; an amino, –NH2 group; a hydrogen atom; and an R group that is unique for
every amino acid.
3
The n-carboxylic acid group of amino acids is a weak acid, meaning that it releases hydrogen
(such as a proton) at moderate pH values. In other words, carboxylic acid groups (-CO2H) can be
deprotonated to become negative carboxylates (COO - ). The negatively charged carboxylate ion
predominates at pH values greater than the pKa of the carboxylic acid group (meaning that for the
20 common α- amino acids it is about 2.2). In a complementary fashion, the amine of amino acids
is a weak base, meaning that it accepts a proton at moderate pH values. In other words, amino
groups (NH2-) can be protonated to become positive ammonium groups (+NH3-). The positively
charged ammonium group predominates at pH values less than the pKa of the ammonium group
(meaning that for the 20 common α-amino acids it is about 9.4).
Because all amino acids contain amine and carboxylic acid functional groups, they share
amphoteric properties. Below pH 2.2, the predominant form will have a neutral carboxylic acid
group and a positive - ammonium ion (net charge +1), and above pH 9.4, a negative carboxylate
and neutral -amino group (net charge -1). But at pH between 2.2 and 9.4, an amino acid usually
contains both a negative carboxylate and a positive -ammonium group and this result in a zero net
charge. This molecular state is known as a zwitterion, from the
4
The Isoelectric Point
The isoelectric point, pI, is the pH of an aqueous solution of an amino acid (or peptide) at which the molecules on
average have no net charge. In other words, the positively charged groups are exactly balanced by the negatively
charged groups. For simple amino acids such as alanine, the pI is an average of the pKa's of the carboxyl (2.34) and
ammonium (9.69) groups. Thus, the pI for alanine is calculated to be: (2.34 + 9.69)/2 = 6.02, the experimentally
determined value. If additional acidic or basic groups are present as side-chain functions, the pI is the average of the
pKa's of the two most similar acids. To assist in determining similarity we define two classes of acids. The first
consists of acids that are neutral in their protonated form (e.g. CO2H & SH). The second includes acids that are
positively charged in their protonated state (e.g. -NH3+). In the case of aspartic acid, the similar acids are the alpha-
carboxyl function (pKa = 2.1) and the side-chain carboxyl function (pKa = 3.9), so pI = (2.1 + 3.9)/2 = 3.0. For
arginine, the similar acids are the guanidinium species on the side-chain (pKa = 12.5) and the alpha-ammonium
function (pKa = 9.0), so the calculated pI = (12.5 + 9.0)/2 = 10.75.
5
Examples of some α-amino acids
6
Classification of Amino acids
7
Essential Amino acids
An essential amino acid or indispensable amino acid (or proteinogenic amino acid) is an amino acid that cannot be
synthesized de novo by the organism, but must be supplied in its diet. The essential amino acids that must enter the body
through diet are histidine, isoleucine, leucine. lysine. Methionine and cysteine (or sulphur amino acids), phenylalanine
and tyrosine (or aromatic amino acids), threonine, tryptophan, and valine.
8
Synthesis of α-Amino Acids
1) Amination of alpha-bromo-carboxylic acids. The bromoacids are prepared from carboxylic acids by reaction with Br2 +
PCl3. Although this direct approach gave mediocre results when used to prepare simple amines from alkyl halides, it is
more effective for making amino acids, thanks to the reduced nucleophilicity of the nitrogen atom in the product.
Nevertheless, more complex procedures that give good yields of pure compounds are often chosen for amino acid synthesis.
2) The Strecker synthesis, assembles an alpha-amino acid from ammonia (the amine precursor), cyanide (the carboxyl
precursor), and an aldehyde. This reaction (shown below) is essentially an imino analog of cyanohydrin formation. The
alpha-amino nitrile formed in this way can then be hydrolyzed to an amino acid by either acid or base catalysis
9
Reactions of α-Amino Acids
1. Carboxylic Acid Esterification
Amino acids undergo most of the chemical reactions characteristic of each function, assuming the pH is adjusted to an appropriate value.
Esterification of the carboxylic acid is usually conducted under acidic conditions, as shown in the two equations written below. Under
such conditions, amine functions are converted to their ammonium salts and carboxylic acids are not dissociated.
Esterification of α-amino acids in the presence of methanol yields a stable ammonium salt. The amino ester formed by neutralization of
this salt is unstable, due to acylation of the amine by the ester function.
The second reaction illustrates benzylation of the two carboxylic acid functions of aspartic acid, using p-toluene - sulfonic acid as an
acid catalyst. Once the carboxyl function is esterified, zwitterionic species are no longer possible and the product behaves like any 1º-
amine.
10
1. The Ninhydrin Reaction
In addition to these common reactions of amines and carboxylic acids, common alpha-amino acids, except proline, undergo a
unique reaction with the triketohydrindene hydrate known as Ninhydrin. Among the products of this unusual reaction is a
purple colored imino derivative, which provides as a useful color test for these amino acids, most of which are colorless.
11
Peptide bonds
Amino acids are linked together by ‘amide groups’ called peptide bonds.
During protein synthesis, the carboxyl group of amino acid at the end of the growing polypeptide
chain reacts with the amino group of an incoming amino acid, releasing a molecule of water. The
resulting bond between the amino acids is a peptide bond.
Amide linkages between amino acids are known as peptide bonds, and the product of peptide bond formation between two
amino acids is called a dipeptide. The peptide chain may be extended to incorporate three amino acids in a tripeptide, four
in a tetrapeptide, and so on. Polypeptides contain many amino acid units. If the amine and carboxylic acid functional
groups in amino acids join together to form amide bonds, a chain of amino acid units, called a peptide, is formed
12
PROTEINS
13
Structural Classifications of Proteins
Primary Structure
Primary Structure describes the unique order in which amino acids are linked together to form a protein. Proteins are
constructed from a set of 20 amino acids.
14
Secondary Structure
Secondary Structure refers to the coiling or folding of a polypeptide chain that gives the protein its 3-D shape. There are
two types of secondary structures observed in proteins. One type is the alpha (α) helix structure. This structure resembles
a coiled spring and is secured by hydrogen bonding in the polypeptide chain. The second type of secondary structure in
proteins is the beta (β) pleated sheet. This structure appears to be folded or pleated and is held together by hydrogen
bonding between polypeptide units of the folded chain that lie adjacent to one another.
15
16
Tertiary Structure
Tertiary Structure refers to the comprehensive 3-D structure of the polypeptide chain of a protein. There are several types of
bonds and forces that hold a protein in its tertiary structure. They are:
(i) Hydrophobic interactions. The "R" group of the amino acid is either hydrophobic or hydrophilic. The amino acids with
hydrophilic "R" groups will seek contact with their aqueous environment, while amino acids with hydrophobic "R" groups
will seek to avoid water and position themselves towards the center of the protein.
17
Tertiary Structure of Proteins
18
Quaternary Structure
When multiple polypeptide chain subunits come together, then the protein attains its quaternary
structure.
•An example for quaternary structure is hemoglobin. The hemoglobin carries oxygen in the blood
and is made up of four subunits, two each of the α and β types
19
Denaturation and protein folding
Each protein has its own unique shape. If the temperature or pH of a protein's environment is
changed, or if it is exposed to chemicals, these interactions may be disrupted, causing the
protein to lose its three-dimensional structure and turn back into an unstructured string of
amino acids.
When a protein loses its higher-order structure, but not its primary sequence, it is said to be
denatured. Denatured proteins are usually non-functional
The denaturation process can be achieved by any one of the following methods: increasing
temperature, changing pH, using denaturants (i.e.urea, guanidine hydrochloride, beta-
mercaptoethanol, dithiothreitol), inorganic salts (i.e lithium bromide, potassium thiocyanate,
sodium iodide), organic solvents and (i.e. formamide, dimethylformamide, dichloro- and
trichloroacetic acids and their salts), detergents (i.e. sodium dodecyl sulphate), high pressure and
ultrasonic homogenization.
20
Carboxylic acids
By:
Dr. I. O. Otemuyiwa
Dept of Chemistry
Obafemi Awolowo University, Ile-Ife, Nigeria
When a carbonyl carbon also bears a hydroxyl group, then these compounds are appreciably acidic, and are
called carboxylic acids.
Carboxylic acids are classified according to the substituent that is bonded to the carboxyl carbon:
Aliphatic acids have an alkyl group bound to the carboxyl group.
An aromatic acid has an aryl group bound to the carboxyl group.
A carboxylic acid donates protons by the heterolytic cleavage of the O-H bond, generating a carboxylate ion.
Physical Properties of Carboxylic Acids
Carboxyl groups exhibit very strong hydrogen bonding. A given carboxylic acid molecule form two
hydrogen bonds to another carboxylic acid molecule, producing a “dimer”, a complex with a mass
twice that of a single molecule.
Compounds with carboxyl groups have higher boiling points than alcohols. This is because the
carboxyl groups hydrogen bond more strongly than alcohols
Carboxyl groups make molecules very soluble in water because the group can strongly hydrogen
bond with water.
Preparation of Carboxylic Acids
Carboxylic acids are easily by oxidation of primary alcohols and aldehydes. When the oxidation
process begins with an alcohol it is difficult to stop at the aldehyde stage of oxidation.
The reason why carboxylic acids are much more acidic than alcohols is because the carboxylate anion is much more stable
than the alkoxide anion.
Both alcohols and carboxylic acids are acidic since their respective O-H bonds can be broken heterolytically, giving a
proton and an oxygen anion. The difference lies in the fact that the carboxylate anion has the negative charge spread out
over two oxygen atoms, whereas the alkoxide has the negative charge localized on a single oxygen atom.
Esterification
A carboxylic acid and an alcohol will form an ester and water
Reaction with Alkalis- The reaction of carboxylic acids with alkalies will lead to the formation of corresponding salts and
water.
However, most phenols do not release effervescence with an aqueous NaHCO3 solution. Thus the reaction of bicarbonate with
carboxylic acids helps in distinguishing between phenols and carboxylic acids.
1
Introduction
Carbonyl compounds are ubiquitous in nature, and they are of
importance to organic chemistry, biology and biochemistry. Proteins,
carbohydrates and nucleic acids all contain the carbonyl group.
The carbonyl, though sp2 hybridized with a bond angle of 120°, is rather
different from an alkene because O-atom is more electronegative than
carbon, hence the C=O bond is polar. In addition, the carbonyl C=O is
also shorter and stronger than the alkene double bond.
+ -
C O
Aldehydes and ketones are carbonyl compounds attached to groups that
cannot be replaced by a nucleophile. When the carbonyl is linked to one
alkyl group and a hydrogen, it is an aldehyde and when the carbonyl is
connected to two alkyl groups (or a ring residue) it is a ketone.
R R
CO C O
H
R
2
a
l
deh
y
de k
et
one
Both aldehydes and ketones have the general formula of CnH2nO.
Aldehydes are represented generally as RCHO and the functional group
is terminal, while the non terminal ketone is represented as RCORʹ. The
polarization of the carbonyl group contributes to the properties and
reactivity of ketones and aldehydes.
3
Nomenclature
a. Aldehydes
- Trivial names derived from the corresponding carboxylic acids
4
- IUPAC nomenclature
5
b. Ketones
- Trivial naming can be used such that both alkyl groups are named
followed by ketone.
6
- IUPAC nomenclature
7
Preparation
1. Oxidation of primary alcohols gives aldehydes while oxidation of
secondary alcohols gives ketones.
9
3. Hydration of alkynes: Hydroboration-oxidation of an alkyne gives
anti-Markovnikov addition of water across the triple bond. Di
(secondary isoamyl)borane, called disiamylborane, is used, since this
bulky borane cannot add twice across the triple bond. On oxidation of
the borane, the unstable enol quickly tautomerizes to the aldehyde.
OH
1) disiamyl borane
CH3CH2C CH CH3CH2CH=CH2
2) H2O2, NaOH
an enol
B O
H CH3CH2CH2CH
(sia)2BH an aldehyde
10
Sulphuric acid and mercuric ion catalysed hydration of a terminal
alkyne gives the Markovnikov addition of water across the triple bond
leading to the formation of an unstable enol that tautomerizes to the
ketone. Internal alkynes can also be hydrated but a mixture of
products often results.
OH
HgSO 4, H2SO4
CH3CH2C CH CH3CH2C=CH2
H2O
an enol
O
CH3CH2CCH3
a ketone
11
4. Friedel-Crafts Acylation
Friedel-Crafts alkylation is a good way for synthesizing diaryl
ketones or alkyl aryl ketones.
12
The Gatterman-Koch synthesis is a variant of the Friedel-Crafts
acylation in which carbonmonoxide and HCl generate an
intermediate that reacts like formyl chloride.
O
CH
CO, HCl
AlCl 3/CuCl
benzene or activated benzene needed
in situ preparation of formyl chloride
O
C O + HCl HCCl
13
Physical Properties of Aldehydes & Ketones
Neither aldehydes nor ketones possess the ability to H-bond with other
molecules like themselves. Consequently, boiling points for aldehydes
and ketones are lower than for alcohols of similar molar mass.
The C-O double bond in these molecules is polar, so dipole-dipole
forces do exist. As a result, their boiling points tend to be higher than
for alkanes of similar molar mass.
Water molecules can interact (H-bond) with the non-bonding pairs of
the carbonyl group oxygen atom, enabling aldehydes and ketones that
have small carbon chain components to be water-soluble.
In general, the greater the carbon chain length, the lower the water-
solubility (molecule becomes less polar).
14
15
Reactions of Aldehydes & Ketones
In general, aldehydes are more reactive than ketones.
1. Oxidation: Aldehydes can be oxidized easily to carboxylic acids,
but ketones are resistant to oxidation.
16
2. The haloform reaction (base-catalysed halogenation of methyl
ketones) is an example of a reaction occuring at an α-C to a carbonyl.
18
Deoxygenation involves the replacement of the
carbonyl oxygen by 2 hydrogen atoms leading to an
alkane. This can take place under two reaction
conditions:
Clemmenson reduction: this reduction method
works for compounds that are not sensitive to acid.
19
Wolff-Kishner reduction: for compounds that are acid
sensitive.
20
4. Nucleophilic addition
O + OH
O H3O
Nu: Nu Nu
b. Formation of cyanohydrins
O OH
CH C H
HCN, (KCN trace amt.)
CN
+ enant.
Mandelonitrile
H in defense glands of
O millipede A. corrugata
CH
CN 21
c. Formation of acetals
O + HO OCH3
H , CH3OH +
H , CH3OH CH3O OCH3
hemiacetal acetal
O CH3CH2O OCH2CH3
+
excess CH3CH2OH, H + H2O
d. Formation of imines
22
23
End of Lecture 5
24
By:
Dr. I. O. Otemuyiwa
Dept of Chemistry
Obafemi Awolowo University, Ile-Ife, Nigeria
1
Alcohols or Alkanols
Alcohols or Alkanols are organic compounds in which a hydrogen atom of an aliphatic carbon is replaced
with a hydroxyl group
One way of classifying alcohols is based on which carbon atom is bonded to the hydroxyl group. If this carbon is primary
(1°, bonded to only one other carbon atom), the compound is a primary alcohol.
A secondary alcohol has the hydroxyl group on a secondary (2°) carbon atom, which is bonded to two other carbon
atoms.
A tertiary alcohol has the hydroxyl group on a tertiary (3°) carbon atom, which is bonded to three other carbons.
Alcohols are referred to as allylic or benzylic if the hydroxyl group is bonded to an allylic carbon atom (adjacent to a C=C
double bond) or a benzylic carbon atom (next to a benzene ring), respectively
2
3
Nomenclature
Common names
The common name of an alcohol combines the name of the alkyl group with the word alcohol. If the alkyl group is complex,
the common name becomes awkward and the IUPAC name should be used. Common names often incorporate obsolete
terms in the naming of the alkyl group; for example, amyl is frequently used instead of pentyl for a five-carbon chain.
Using the IUPAC system, the name for an alcohol uses the -ol suffix with the name of the parent alkane, together with a
number to give the location of the hydroxyl group. The rules are summarized in a three-step procedure:
*Name the longest carbon chain that contains the carbon atom bearing the ―OH group. Drop the final -e from the alkane
name, and add the suffix -ol.;
*Number the longest carbon chain starting at the end nearest the ―OH group, and use the appropriate number, if necessary,
to indicate the position of the ―OH group; and
4
*Name the substituents, and give their numbers as for an alkane or alkene.
Using the IUPAC system, the name for an alcohol uses the -ol suffix with the name of the parent alkane, together with a
number to give the location of the hydroxyl group. The rules are summarized in a three-step procedure:
*Name the longest carbon chain that contains the carbon atom bearing the ―OH group. Drop the final -e from the alkane
name, and add the suffix -ol.;
*Number the longest carbon chain starting at the end nearest the ―OH group, and use the appropriate number, if necessary,
to indicate the position of the ―OH group; and
*Name the substituents, and give their numbers as for an alkane or alkene.
5
Physical Properties of Alcohol
Most of the common alcohols are colourless liquids at room temperature. Methyl alcohol, ethyl alcohol, and isopropyl
alcohol are free-flowing liquids with fruity odours. The higher alcohols—those containing 4 to 10 carbon atoms—are
somewhat viscous, or oily, and they have heavier fruity odours. Some of the highly branched alcohols and many
alcohols containing more than 12 carbon atoms are solids at room temperature.
The Boiling Point of Alcohols
Alcohols generally have higher boiling points in comparison to other hydrocarbons having equal molecular masses. This
is due to the presence of intermolecular hydrogen bonding between hydroxyl groups of alcohol molecules. In general,
the boiling point of alcohols increases with an increase in the number of carbon atoms in the aliphatic carbon chain.
On the other hand, the boiling point decreases with an increase in branching in aliphatic carbon chains the Van der
Waals forces decreases with a decrease in surface area. Thus, primary alcohols have a higher boiling point.
The oxygen atom of the strongly polarized O―H bond of an alcohol pulls electron density away from the hydrogen
atom. This polarized hydrogen, which bears a partial positive charge, can form a hydrogen bond with a pair of
nonbonding electrons on another oxygen atom.
6
2. Solubility of Alcohols
The solubility of alcohol in water is governed by the hydroxyl group present. The hydroxyl group in alcohol is involved in
the formation of intermolecular hydrogen bonding. Thus, hydrogen bonds are formed between water and alcohol molecules
which make alcohol soluble in water. However, the alkyl group attached to the hydroxyl group is hydrophobic in nature.
Thus, the solubility of alcohol decreases with the increase in the size of the alkyl group. Alcohols with higher molecular
weights tend to be less water-soluble, because the hydrocarbon part of the molecule, which is hydrophobic (“water-hating”),
is larger with increased molecular weight. Because they are strongly polar, alcohols are better solvents than hydrocarbons for
ionic compounds and other polar substances.
7
. The Acidity of Alcohols
Alcohols react with active metals such as sodium, potassium etc. to form the corresponding alkoxide. These reactions of
alcohols indicate their acidic nature. The acidic nature of alcohol is due to the polarity of –OH bond. The acidity of alcohols
decreases when an electron-donating group is attached to the hydroxyl group as it increases the electron density on the oxygen
atom. Thus, primary alcohols are generally more acidic than secondary and tertiary alcohols.
Alcohols are weak acids. The most acidic simple alcohols (methanol and ethanol) are about as acidic as water, and most other
alcohols are somewhat less acidic.
A strong base can deprotonate an alcohol to yield an alkoxide ion (R―O−). For example, sodamide (NaNH2), a very strong
base, abstracts the hydrogen atom of an alcohol. Metallic sodium (Na) or potassium (K) is often used to form an alkoxide by
reducing the proton to hydrogen gas.
8
Preparation of alcohols
By catalytic reaction of carbon monoxide (CO) with hydrogen gas (H2) under high temperature and pressure.
Methanol is synthesized commercially by this method
Hydration of alkenes
The addition of water (hydration) across the double bond of an alkene yields an alcohol. In most cases, water adds in the
direction that places the new hydroxyl group on the more highly substituted end of the double bond according to
the Markovnikov rule, as in acid-catalyzed hydrations. (The more highly substituted end of the double bond is the one that is
bonded to more carbon atoms.)
9
By Fermentation
Ethanol (ethyl alcohol) has been produced since prehistoric times, mostly through the fermentation of fruit juices. Many
different sources can provide the sugars and starches that are broken down to simpler compounds during fermentation.
Ethanol is called grain alcohol because it is often made from grains, such as corn (maize), wheat, rye, and barley. The grain
is first boiled in water to produce the mash, which is incubated with malt (sprouted barley) to yield the wort. Malt provides
an enzyme (diastase) that converts starches in the grain to the sugar maltose. The wort is incubated with brewer’s yeast,
which secretes the enzyme maltase to convert maltose to glucose and the enzyme zymase to convert glucose to ethanol. Two
of the six carbon atoms in glucose are oxidized to carbon dioxide (CO2); this oxidation provides energy to the yeast cells.
10
Chemical Properties of Alcohols
Oxidation of Alcohol
•Alcohols undergo oxidation in the presence of an oxidizing agent to produce aldehydes and ketones which upon further
oxidation give carboxylic acids.
Secondary alcohols are easily oxidized without breaking carbon-carbon bonds only as far as the ketone stage. No further
oxidation is seen except under very stringent conditions. Tertiary alcohols cannot be oxidized at all without breaking carbon-
carbon bonds, whereas primary alcohols can be oxidized to aldehydes or further oxidized to carboxylic acids.
Chromic acid (H2CrO4, generated by mixing sodium dichromate, Na2Cr2O7, with sulfuric acid, H2SO4) is an effective
oxidizing agent for most alcohols. It is a strong oxidant, and it oxidizes the alcohol as far as possible without breaking
carbon-carbon bonds. Chromic acid oxidizes primary alcohols to carboxylic acids, and it oxidizes secondary alcohols to
ketones. Tertiary alcohols do not react with chromic acid under mild conditions. 11
Dehydration to alkenes
Dehydrations are most commonly carried out by warming the alcohol in the presence of a strong dehydrating acid, such as
concentrated sulfuric acid
Most alcohol dehydrations take place by the mechanism shown below Protonation of the hydroxyl group
allows it to leave as a water molecule. The species that remains has a carbon atom with only three bonds
and a positive charge and is called a carbocation. This intermediate species can be stabilized by loss of
a proton from a carbon atom adjacent to the positively charged carbon ion, giving the alkene.
12
Because they involve carbocation intermediates, alcohol dehydrations go more quickly and easily if they form relatively
stable carbocations. More highly substituted carbocations are more stable (3° > 2° > 1°); therefore, more highly substituted
alcohols undergo dehydration more readily than less highly substituted alcohols (3° > 2° > 1°). If more than one alkene
can be formed in a dehydration, the major product is usually the product with the most highly substituted double bond
(Saytzeff’s rule)
13
Dehydration to ethers
Under carefully controlled conditions, simple alcohols can undergo intermolecular dehydration to give ethers. This reaction
is effective only with methanol, ethanol, and other simple primary alcohols, but it is the most economical method for
making ethyl ether (also known as diethyl ether), an important industrial solvent.
Esterification
Alcohols can combine with many kinds of acids to form carboxylic esters that is the ester of an alcohol and a carboxylic
acid. The reaction, called Fischer esterification, is characterized by the combining of an alcohol and an acid (with acid
catalysis) to yield an ester plus water.
14
Substitution to form alkyl halides
Alkyl halides are often synthesized from alcohols, in effect substituting a halogen atom for the hydroxyl group. Hydrochloric
(HCl), hydrobromic (HBr), and hydroiodic (HI) acids are useful reagents for this substitution, giving their best yields with
tertiary alcohols. Thionyl chloride (SOCl2), phosphorus tribromide (PBr3), and phosphorus triiodide (generated
from phosphorus, P, and molecular iodine, I2) are also useful for making alkyl chlorides, bromides, and iodides, respectively.
15