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Virology.
What organisms are considered to be
microbial cells and studied in microbiology
• Dmitri Iosifovich Ivanovsky (28 October 1864 – 20 June 1920) was a Russian botanist, the discoverer of
viruses (1892) and one of the founders of virology.
• Ivanovsky studied and investigate a tobacco disease causing great damage to plantations located there at the
time.
• He discovered that both incidents of disease were caused by an extremely minuscule infectious agent,
capable of permeating porcelain Chamberland filters, something which bacteria could never do.
Structure of tobacco mosaic virus: RNA coiled
in a helix of repeating protein sub-units
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Complex
• These viruses possess a capsid that is neither purely helical nor purely
icosahedral, and that may possess extra structures such as protein
tails or a complex outer wall.
• Some bacteriophages, such as Enterobacteria phage T4, have a
complex structure consisting of an icosahedral head bound to a
helical tail, which may have a hexagonal base plate with protruding
protein tail fibres.
• This tail structure acts like a molecular syringe, attaching to the
bacterial host and then injecting the viral genome into the cell.
Some bacteriophages inject their genomes
into bacterial cells (not to scale)
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DNA viruses
• The genome replication of most DNA viruses takes place in the cell's
nucleus.
• If the cell has the appropriate receptor on its surface, these viruses enter
the cell sometimes by direct fusion with the cell membrane (e.g.,
herpesviruses) or—more usually—by receptor-mediated endocytosis.
• Most DNA viruses are entirely dependent on the host cell's DNA and RNA
synthesising machinery, and RNA processing machinery.
• Viruses with larger genomes may encode much of this machinery
themselves.
• In eukaryotes the viral genome must cross the cell's nuclear membrane to
access this machinery, while in bacteria it need only enter the cell.
RNA viruses
• Replication usually takes place in the cytoplasm. RNA viruses can be
placed into four different groups depending on their modes of
replication. The polarity (whether or not it can be used directly by
ribosomes to make proteins) of single-stranded RNA viruses largely
determines the replicative mechanism; the other major criterion is
whether the genetic material is single-stranded or double-stranded.
• All RNA viruses use their own RNA replicase enzymes to create copies
of their genomes.
Reverse transcribing viruses
• Retroviruses
They form a special group of RNA viruses. Their discovery changed the previously used theory of
genetic information transfer (the so-called central dogma of molecular biology, DNA - RNA -
protein). RNA has been found to produce a complementary strand of viral DNA by the reverse
transcription process. The process catalyzes the enzyme reverse transcriptase.
The viral RNA is transcribed by the virus-borne and encoded reverse transcriptase into the single-
stranded DNA (ssDNA). The RNA-DNA complex is formed in the cells. This is followed by
degradation of the RNA strand and its replacement by the DNA strand to form a dsDNA molecule.
This dsDNA is integrated into the chromosome of the host cell and referred to as provirus
(proviral DNA). Viral proteins are synthesized on a viral mRNA matrix that is transcribed from a
proviral dsDNA. Viral RNA molecules formed by transcription of proviral DNA are used as genomic
RNAs in folding new virions. Retroviruses are agents of sarcomas, lymphomas and leukemias in
birds and mammals.
• Retroviruses integrate the DNA produced by reverse transcription into the host genome as a
provirus as a part of the replication process; pararetroviruses do not, although integrated genome
copies of especially plant pararetroviruses can give rise to infectious virus. They are susceptible to
antiviral drugs that inhibit the reverse transcriptase enzyme, e.g. zidovudine and lamivudine. An
example of the first type is HIV, which is a retrovirus. Examples of the second type are the
Hepadnaviridae, which includes Hepatitis B virus.
Human Immunodeficiency Virus
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Influenza
Influenza, commonly known as the flu, is an infectious disease caused by an
influenza virus. Symptoms can be mild to severe. The most common
symptoms include: high fever, runny nose, sore throat, muscle pains,
headache, coughing, and feeling tired. These symptoms typically begin two
days after exposure to the virus and most last less than a week. The cough,
however, may last for more than two weeks.
Possible complications are bronchitis, pneumonia, less frequent are nervous
system involvement or cardiac muscle inflammation.
Influenza virus is enveloped virus, we distinguish three subtypes A, B and C.
Influenza infections in adults are caused by subtypes A and B, type C is the
cause of upper respiratory tract infections in children.
Antiviral drugs such as the neuraminidase inhibitor oseltamivir, among
others, have been used to treat influenza.
Influenza
• The surface antigens of influenza viruses are hemagglutinin (16 types, H1-H16)
and neuramidase (9 types, N1-N9), are variable and allow differentiation of virus
variants.
• Hemagglutinin binds to susceptible cell receptors and mediates penetration with
subsequent exocytosis of the enveloped virion. Mutations also alter antigenic
properties (this process is called antigenic shift). Subsequently, a new subtype
with the majority of pandemic infection occurs. Also, the exchange between
human and animal viruses (eg pigs) generates new subtypes.
Influenza infection is spread by droplet transmission. It manifests with increased
temperature, headaches, joints and muscles, cold and cough.
• Influenza disease is characterized by a high contagion and a mass incidence of the
disease, characterized as an epidemic or pandemic.
• Influenza viruses can be vaccinated.
Influenza
Larger outbreaks known as
pandemics are less frequent.
In the 20th century, three
influenza pandemics occurred:
Spanish influenza in 1918 (40–
50 million deaths), Asian influenza
in 1957 (two million deaths), and
Hong Kong influenza in 1968 (one
million deaths).
Influenza may also affect other
animals, including pigs, horses,
and birds.
Rabies
• Rabies virus - rabies virus is contagious to all warm-blooded vertebrates, causing most fatal diseases. Rabies
is a viral disease that causes inflammation of the brain in humans and other mammals. These symptoms are
followed by one or more of the following symptoms: violent movements, uncontrolled excitement, fear of
water, an inability to move parts of the body, confusion
• In nature, the reservoir is mainly canine and feline, bats and primates. In the Czech Republic, the reservoir is
a fox, less often other carnivores, rodents and bats. From the infected animal, the virus is transmitted to
other wild and domestic animals.
• The disease has a long incubation period, which allows the litter of the next generation. The time period
between contracting the disease and the start of symptoms is usually one to three months.
• The virus enters the organism after a bite of an infected animal. Neuronal axons spread through the CNS to
the brain. The time depends on the distance the virus must travel along peripheral nerves to reach the
central nervous system.
• Saliva is excreted before the onset of clinical symptoms. However, it may be shorter or last several months or
years. At the beginning, the disease is manifested by fatigue, irritability, headache, insomnia. They quickly
turn into serious CNS disorders, impaired vegetative function (sweating, salivation) and muscle spasms.
Eventually, muscle paralysis and respiratory arrest occur. Passive vaccination was first introduced by L.
Pasteur. Nowadays, the vaccination of dogs against rabies, fox vaccination, in humans is carried out after
biting an infected animal active immunization.
Hepatitis
• Hepatitis is inflammation of the liver tissue. Some people with hepatitis
have no symptoms, whereas others develop yellow discoloration of the
skin and whites of the eyes, poor appetite, vomiting, tiredness, abdominal
pain, and diarrhea.
• Hepatitis is most commonly caused by the viruses hepatitis A, B, C, D, and
E.
• Hepatitis A, B, and D are preventable with immunization.
• Hepatitis A is mainly spread by contaminated food and water.
• Hepatitis B is mainly sexually transmitted, but may also be passed from
mother to baby during pregnancy or childbirth and spread through infected
blood. Hepatitis C is commonly spread through infected blood such as may
occur during needle sharing by intravenous drug users.
Hepatitis A
• Hepatitis A virus is transmitted orofecally.
• Poor hygienic conditions facilitate spreading. Viruses multiply in the
gastrointestinal tract and are excreted in the faeces. Liver swelling
occurs. After about a month the infection recedes.
• Uncomplicated disease does not go into the chronic phase, ends in
healing and man gains lasting immunity.
• Death comes exceptionally, can be vaccinated against the disease.
Hepatitis B
• Hepatitis B virus is a DNA virus. The main sources of infection are body
fluids (blood and blood derivatives) and secretions (breast milk, saliva,
semen).
• Nowadays, the infection spreads through sexual intercourse and
contaminated needles of addicts, rarely by passing mother to fetus.
Healthcare professionals, especially dentists, hemodialysis units, and
laboratories that analyze body fluids and secretions may experience
professional infection.
• The disease is manifested by elevated temperature, liver involvement,
jaundice. In a smaller number of patients it has a severe course, in about
5% it goes into a chronic phase with the possibility of liver cirrhosis. The
virus can be vaccinated.
Hepatitis C
• Hepatitis C virus is transmissible by blood and secretions. Nowadays,
blood transfusion, blood derivatives, is already limited.
• Drug addicts pose a risk, infection can occur when the drug is injected
intravenously.
• It causes chronic inflammation of the liver with subsequent liver
cirrhosis and a risk of developing hepatocellular carcinoma.
• A vaccine vaccine has not yet been developed.
Ebola virus and Marburg virus
• Ebola virus and Marburg virus are viruses that cause severe
haemorrhagic fever in humans with a lethal course of the disease.
Virions in both cases are long, fibrous.
• The incubation period for both viruses is short 3-10 days. Symptoms
of the disease are fever, vomiting and bleeding into the internal
organs. In approximately 80%, Ebola is a fatal disease.
• Viruses are found in Africa. Ebola virus is known in 4 types - Zaire,
Sudan, Ivory Coast and Reston. Reston has been isolated from Filipino
monkeys and is harmless to humans.
• There are no vaccines against viruses yet.