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A Prediction Model

for Mosquito Density1

Lisa Grace S. Bersales, PhD2 and Lilian A. de las Llagas,PhD3

1 based on a study of the UP School of Statistics Research Foundation and the UP Manila College of Public Health funded
by the DOST-PCHRD
2Professor of Statistics, School of Statistics, University of the Philippines Diliman and National Statistican,Philippine

Statistics Authority
3Professor of Parasitology, Department of Parasitology, College of Public Health, University of the Philippines Manila

13th National Convention on Statistics


October 3-4, 2016, EDSA Shangri-La Hotel, Mandaluyong City
Outline of Presentation

•Motivation for the Study


•Objective
•Framework
•Data Collection
•Model
•Results
•Moving Forward

13th National Convention on Statistics


October 3-4, 2016, EDSA Shangri-La Hotel, Mandaluyong City
Motivation for the Study

• Mosquito-borne diseases (MBD) are preventable


public health problems
– Focus for dengue (and zika)
• ages of cases ranged from less than 1 month to 99
years old. (median = 13 years)
• Majority of the cases belong to the 5-14 years age
group (DOH-Epidemiology Bureau, 2015)

13th National Convention on Statistics


October 3-4, 2016, EDSA Shangri-La Hotel, Mandaluyong City
Motivation for the Study

 Realities
• Population at risk are school children
• High mosquito-pupil contact in schools
• 3S prevention and control measures (DOH-2015)
• Search & Destroy
• Self-protection measures
• Say yes to fogging when NOT FULLY
there is an impending WORKING
outbreak

13th National Convention on Statistics


October 3-4, 2016, EDSA Shangri-La Hotel, Mandaluyong City
Motivation for the Study

• active pest surveillance is not routinely done


• an absence of the true picture of mosquito infestation
levels before, during, and after dengue transmission
months
• a threshold size of the pest mosquito is needed to keep a
stable level of disease transmission as initiating and
maintaining transmission
• cost, logistics, and negative attributes relative to larval
surveillance, limit the practice of doing routine vector
surveillance

13th National Convention on Statistics


October 3-4, 2016, EDSA Shangri-La Hotel, Mandaluyong City
Motivation for the Study

• without an active mosquito surveillance, this threshold size


remains unknown and control is a hit and miss thing 
unreliable
• abundance of dengue is closely associated with the vector
abundance and driven by climate, vector control practices,
and human behavior

13th National Convention on Statistics


October 3-4, 2016, EDSA Shangri-La Hotel, Mandaluyong City
Against this background,
this research offers a tool to address these
challenges and realities

A Mosquito Density Prediction Model


(mosquito surveillance without conducting field surveillance)

13th National Convention on Statistics


October 3-4, 2016, EDSA Shangri-La Hotel, Mandaluyong City
Aim of the Research

• To collect field data as inputs to a statistical model


predicting for estimates of OVITRAP INDEX (OI)
• a sensitive and effective surveillance tool in public
elementary & high schools in the PH; situated in Luzon,
Visayas, and Mindanao mega and provincial cities
• outcome variable: OI
• predictor variables: reinfestation index,
productivity container index, climate,
vector control practices

13th National Convention on Statistics


October 3-4, 2016, EDSA Shangri-La Hotel, Mandaluyong City
Research Framework

The ovitrap system and its measurement, the OI, best reflect
and illustrate the interrelationships of the predictor variables
and their response to climate and non-climate influences.

13th National Convention on Statistics


October 3-4, 2016, EDSA Shangri-La Hotel, Mandaluyong City
Ecological-biological-socio- OVITRAP INDEX
economic Vector Control Climate

Eschewed containers:

1. Conspecific attraction No. of gravid females RH (%)


attracted to lay eggs on the Temperature
2. Container characteristics
ovitraps; site
3. Location of the container Conspecific attraction

4. Mosquito adult trap (MAT)


No. of surviving females
Adulticiding through one day to RH (%) Temperature
complete the gonotropic
Genetic Control cycle

Source reduction No. of surviving pupae Air and Water Temperature


emerging as adults
Larviciding
Temperature
Source reduction
No. of larvae Interspecies competition
Mosquito larvicidal trap
metamorphosing to adults Larval food
(MLT)
Predators

Household storing, filling Rainfall (inundation)


Eggs laid on the containers
and emptying of containers
indoor/outdoor
practices

By
13th: National
De Las Llagas (2000,
Convention 2002, 2007, 2009, 2013 & 2014)
on Statistics
October 3-4, 2016, EDSA Shangri-La Hotel, Mandaluyong City
Significance / Application

To have a readily available and accessible mosquito density,


the OI estimates, without doing field surveillance during and
after dengue high transmission for sustained control efforts.

The model serving as an early warning device to prompt the


communities to do an aggressive mosquito search and
destroy activities because their schools are at risk of having
dengue transmission.

13th National Convention on Statistics


October 3-4, 2016, EDSA Shangri-La Hotel, Mandaluyong City
Aim of the Research
• To collect field data as inputs to a statistical model predicting for
estimates of OVITRAP INDEX (OI)
• a sensitive and effective surveillance tool in public
elementary & high schools in the Philippines; situated in
Luzon, Visayas, and Mindanao
• outcome variable: OI
• predictor variables: climate, productivity container
index, reinfestation rate and vector control practices

13th National Convention on Statistics


October 3-4, 2016, EDSA Shangri-La Hotel, Mandaluyong City
Methodology
1.Selected public elementary and high schools located in 4
climate types in the Philippines
•with reported dengue cases
TYPE 1: QC and Tagaytay
TYPE 2: Sorsogon
TYPE 3: Cebu and Tuguegarao
TYPE 4: Davao
2. Profiled the school containers
3. Set the inclusion criteria

13th National Convention on Statistics


October 3-4, 2016, EDSA Shangri-La Hotel, Mandaluyong City
Methodology
4.1 Entomological sampling - weekly from July to 12-15 months
representing the 4 seasons of the year (HD, HW, CW, CD)

4.2 Synoptic- and macro-climate readings

5. Ovitrap surveillance system procedures and activities

6. Data collection and management

13th National Convention on Statistics


October 3-4, 2016, EDSA Shangri-La Hotel, Mandaluyong City
JULY2015 – JUNE2016
DATA PER CLIMATE TYPE
Wet months

DRY WET
CLIMATE
MONTHS MONTHS
6 MONTHS 4 MONTHS
TYPE 1 (pronounced) (pronounced)

TYPE 3 6 MONTH 4 MONTHS

12 MONTHS
TYPE 2 (pronounced)

TYPE 4 12 MONTHS

Climate Map delineated based on Modified Coronas Classification (PAGASA)


13th
by De Las National
Llagas, Convention
L.A. on Statistics
(10 February 2016)
October 3-4, 2016, EDSA Shangri-La Hotel, Mandaluyong City
The Prediction Model

Fixed Effects Model for Panel Data with interaction effects and
seasonal autoregressive errors

Panel: 21 schools

Period Covered to date for estimating the model: July 2015-


June 2016

13th National Convention on Statistics


October 3-4, 2016, EDSA Shangri-La Hotel, Mandaluyong City
The Prediction Model
Dependent variable: Ovitrap Index(OI)

Predictors:

•Productive Container Index


•Reinfestation rate
•Climate Type: Type 1, Type 2, Type 3, Type 4
•Mean Relative Humidity
•Mean Temperature
•Percentage of classrooms with curtains
•Mean number of electric fans in classrooms

13th National Convention on Statistics


October 3-4, 2016, EDSA Shangri-La Hotel, Mandaluyong City
The Estimated Prediction Model

Dependent Variable: OI
Method: Panel Least Squares
Sample (adjusted): 2016M02 2016M06
Periods included: 5
Cross-sections included: 21
Total panel (balanced) observations: 105
White cross-section standard errors & covariance (d.f.
corrected)
Convergence achieved after 24 iterations

13th National Convention on Statistics


October 3-4, 2016, EDSA Shangri-La Hotel, Mandaluyong City
The Estimated Prediction Model

Predictor Coefficient P-value

Constant 72.21 0.43


Mean Relative Humidity
(MEAN_RH) 2.22 0.01
Mean Temperature
(MEAN_TEMP) 8.26 0.01
Percentage of classrooms with curtains
(CURT) -1.06 0.04
Mean number of fans in classrooms
(FANS) -3.82 0.05
Reinfestation Rate(REINFEST) 6.80 0.00
Productivity Container Index(PCI) -0.10 0.05
13th National Convention on Statistics
October 3-4, 2016, EDSA Shangri-La Hotel, Mandaluyong City
Predictor Coefficient P-value
MAY -142.76 0.03
MEAN_RH 2.22 0.01
MEAN_TEMP 8.26 0.01
MEAN_RH*TYPE1 -1.94 0.01
MEAN_RH*TYPE2 -1.95 0.35
MEAN_RH*TYPE3 -1.97 0.08
MEAN_RH*MAY 1.36 0.00
MEAN_TEMP*TYPE1 -8.53 0.01
MEAN_TEMP*TYPE2 -26.39 0.01
MEAN_TEMP*TYPE3 -10.88 0.07
MEAN_TEMP*MAY 1.58 0.27
CURT*TYPE1 0.97 0.09
CURT*TYPE2 0.95 0.14
CURT*TYPE3 1.42 0.01

13th National Convention on Statistics


October 3-4, 2016, EDSA Shangri-La Hotel, Mandaluyong City
Predictor Coefficient P-value
FANS*TYPE1 5.08 0.53
FANS*TYPE2 6.71 0.00
PCI*TYPE2 0.91 0.00
PCI*TYPE3 -0.16 0.06
REINFEST*TYPE1 -9.15 0.00
REINFEST*TYPE2 -19.05 0.00
MAY*PCI 0.05 0.26
MAY*REINFEST -3.23 0.00
AR(1) 0.16 0.19
AR(3) -0.14 0.38
SAR(4) -0.44 0.00

13th National Convention on Statistics


October 3-4, 2016, EDSA Shangri-La Hotel, Mandaluyong City
Performance of the Prediction Model

Measures of Fit:

R-squared 85.0%
Adjusted R-squared 71.6%

Inverted AR Roots 0.5 .19-.19i .19+.19i -.19+.19i

13th National Convention on Statistics


October 3-4, 2016, EDSA Shangri-La Hotel, Mandaluyong City
Performance of the Prediction Model

Measure of Forecasting Performance:

Within-Sample
Mean Absolute Percentage Error(MAPE)= 9.4%

13th National Convention on Statistics


October 3-4, 2016, EDSA Shangri-La Hotel, Mandaluyong City
Performance of the Prediction Model:Projections

forecast for OI Percentage


(sch id-yrmonth) OI
Error
1 - 16M02 71.64 74.45635089 -3.9%
1 - 16M03 74.44 69.1187157 7.1%
1 - 16M04 62.83 75.34047389 -19.9%
1 - 16M05 60.41 58.12877922 3.8%
1 - 16M06 63.46 56.58424163 10.8%

MAPE 9.1%

13th National Convention on Statistics


October 3-4, 2016, EDSA Shangri-La Hotel, Mandaluyong City
Next Steps

• Data Collection from June 2016 to evaluate


performance of projections>out of sample MAPE

• Geospatial map of predicted ovitrap index

13th National Convention on Statistics


October 3-4, 2016, EDSA Shangri-La Hotel, Mandaluyong City
THANK YOU VERY MUCH!

13th National Convention on Statistics


October 3-4, 2016, EDSA Shangri-La Hotel, Mandaluyong City
References
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13th National Convention on Statistics


October 3-4, 2016, EDSA Shangri-La Hotel, Mandaluyong City
References
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13th National Convention on Statistics


October 3-4, 2016, EDSA Shangri-La Hotel, Mandaluyong City
References
Ocampo VR, De Las Llagas LA, Bertuso AG et al. Dengue Vector Surveillance
in Selected Schools in the National Capital Region (NCR) 2014. Unpublished
Report.
Salazar NP, Baltazar JC, Chan VF. Dengue-Dengue Project: A WHO Funded
Project 1978-1979. Unpublished Report.
Williams CR, Long, S.A., Webb, C.E. Bitzhenner, M., Geier, M., Russell, R.C.,
and Ritchie, S.A. Aedes aegypti Population Sampling Using BG-Sentinel Traps
in North Queensland Australia: Statistical Considerations for Trap Deployment
and Sampling Strategy. Entomological Society of America 2007; 44: 345-350.
Yap HH. Distribution of Aedes aegypti (Linnaeus) and Aedes albopictus (Skuse) in
Small Towns and Villages of Penang Island, Malaysia – An Ovitrap Survey. Southeast
Asian. J. Trop. Med. Public Health 1975; 6: 519-524.

13th National Convention on Statistics


October 3-4, 2016, EDSA Shangri-La Hotel, Mandaluyong City

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