Campbell Shawn O. Farrell international.cengage.com/
Chapter Fifteen The Importance of Energy Changes and Electron Transfer in Metabolism
Paul D. Adams • University of Arkansas
Standard States for Free-Energy Changes • Standard states • for pure solids and liquids, the pure substance • for gases, the gas at a pressure of 1 atm • for solutions, a concentration of 1 mol/L • For the reaction
We can rewrite the equation that relates the G for
the reaction under any conditions to the free-energy change under standard conditions (G˚) A Modified Standard State for Biochemical Applications • Standard free energy change, G°, assumes a concentration of 1 M • if [H+] = 1 M, then pH = 0 • but the pH in most cells is near the neutral range • For biochemical reactions, we define a different standard state for the concentration of H+ • standard state for [H+] = 10-7 M, pH = 7.0 • this modified standard state is given the symbol G°’ • Summary The usual thermodynamic standard state implies that the system involved is at pH=0, which is seldom, if ever, found in living things. The modified standard state explicitly states that the system is at pH=7 Biochemical Connections: Thermodynamics The Nature of Metabolism • Metabolism: the chemical reactions of biomolecules. It is the biochemical basis of life processes • catabolism: the breakdown of larger molecules into smaller ones; an oxidative process that releases energy • anabolism: the synthesis of larger molecules from smaller ones; a reductive process that requires energy A Comparison of Catabolism and Anabolism • Metabolism is the sum total of the chemical reactions of biomolecules in an organism The Role of Oxidation and Reduction in Metabolism • Oxidation-Reduction reactions are those in which electrons are transferred from a donor to an acceptor • oxidation: the loss of electrons; the substance that loses the electrons is called a reducing agent • reduction: the gain of electrons; the substance that gains the electrons is called an oxidizing agent • Carbon in most reduced form- alkane • Carbon in most oxidized form- CO2 (final product of catabolism Standard States for Free-Energy Changes (Cont’d) • When the reaction is at equilibrium, G = 0
• If we can determine the concentration of reactants
and products at equilibrium, we can determine Keq and, from it, the change in free energy for conversion of one mole of reactant to product(s) Summary • In catabolism, large molecules are broken down to smaller products, releasing energy and transferring electrons to acceptor molecules of various sorts. The overall process is one of oxidation.
• In anabolism, small molecules react to give rise to
larger ones; this process requires energy and involves acceptance of electrons from a variety of donors. The overall process is one of reduction Coenzymes used in Biologically important Redox Reactions • Conversion of ethanol to acetaldehyde is a two- electron oxidation NAD+/NADH: An Important Coenzyme • Nicotinamide adenine dinucleotide (NAD+) is an important coenzyme • Acts as a biological oxidizing agent • The structure of NADH is comprised of a nicotinamide portion. It is involved in the reaction. It is a derivative of nicotinic acid • NAD+ is a two-electron oxidizing agent, and is reduced to NADH The Structures and Redox States of the Nicotinamide Coenzymes FAD/FADH2 • Flavin adenine dinucleotide (FAD) is also a biological oxidizing agent • Protons, as well as, electrons are accepted by FAD The Structures of Riboflavin, Flavin Mono- nucleotide (FMN), and Flavin Dinucleotide (FAD) Coupling of Production and Use of Energy • The coupling of energy-producing and energy- requiring reactions is a central theme in the metabolism of all organisms • Energy cannot be used directly, must by shuttled into easily accessible forms of chemical energy • “High Energy” bonds- bonds that require or release convenient amounts of energy, depending on the direction of the reaction • ATP is essential high energy bond-containing compound • Phosphorylation of ADP to ATP requires energy • Hydrolysis of ATP to ADP releases energy The Phosphoric Anhydride Bonds in ATP are “High Energy” Bonds ATP • 4 (-) charges on ATP and 3 on ADP, therefore ATP is less stable. • Why is ATP less stable, charge-wise, than ADP? • Energy must be expended to put on additional negative charge on ADP • Also, entropy loss when ADP is phosphorylated because there is a potential loss of resonance hybridization of inorganic phosphate (Pi) upon phosphorylation of ADP to ATP Loss of a Resonance-Stabilized Phosphate Ion in Production of ATP ATP Hydrolysis Decreases in Electrostatic Repulsion • Marked decrease in electrostatic repulsion of -phosphate of GDP upon hydrolysis of ATP to ADP Organophosphates Important in Producing Energy Role of ATP as Energy Currency Summary • Hydrolysis of ATP to ADP releases energy
• In the coupling of biochemical reactions, the energy
released by one reaction, such as ATP hydrolysis, provides energy for another Coenzyme A in Activation of Metabolic Pathways • A step frequently encountered in metabolism is activation • activation: the formation of a more reactive substance • A metabolite is bonded to some other molecule and the free-energy change for breaking the new bond is negative. • Causes next reaction to be exergonic Two Ways of Looking at Coenzyme A • Coenzyme A (CoA-SH) contains units of 2- mercaptoethylamine, mercaptoethylamine pantothenic acid, and 3’,5’- ADP The Hydrolysis of Acetyl-CoA • The metabolically active form of a carboxylic acid is the corresponding acyl-CoA thioester, in which the thioester linkage is a high-energy bond The Role of Electron Transfer and ATP Production in metabolism Summary • Metabolic pathways proceed in many stages, allowing for efficient use of energy