You are on page 1of 319

Crystal Growth Using Low Temperature

Gradient Sublimation in Vacuo


Jolanta Karpinska M.Sc.

PhD Thesis

Supervisors: Dr. Andrea Erxleben, Prof. Patrick McArdle

National University of Ireland, Galway


OE Gaillimh

Thesis submitted to the School of Chemistry, National


University of Ireland, Galway.

October 2012

Declaration
I declare that the work included in this thesis is entirely my own work and has not
been previously submitted for a degree to this or any other academic institution.

Jolanta Karpinska

Table of Content
Aim of Thesis

vi

Abstract

vii

Acknowledgements

ix

List of Publications

Abbreviations

xii

Symbols and Terms Used in Crystallography

xiv

Chapter 1: Theory
Crystalline solids:

1
2

Polymorphism

Pseudo-polymorphism

Nucleation and Crystal Growth:

Nucleation

Nucleation in polymorphic systems

10

Crystal growth

10

Continuous growth

12

Surface nucleation

12

Spiral growth

13

Crystallization Methods:

15

Solution crystallization

15

Vapour crystallization

16

Melt crystallization

18

Chapter 2: Experimental Section

19

Materials

20

Instrumentation and Techniques:

20

Low temperature gradient sublimation in vacuo,


method A

20

Sublimation in a vacuum oven using an externally


i

Controlled heater, method B

23

X-Ray diffraction techniques

24

Thermal analysis

26

Microscopy

27

ATR-Infrared spectroscopy

28

Chapter 3: Crystal Growth of Pure Form not Available From


Solution: Application to Stanozolol

30

Introduction: Crystalline forms of stanozolol

31

Experimental Section:

32

Crystallization of polymorphic forms stanozolol

32

Crystallization of solvated forms of stanozolol

33

Results:

36

Structural analysis of polymorphism in stanozolol

36

Structural diversity of stanozolol solvates

44

Molecular packing and hydrogen bonding of stanozolol


solvates

55

Tautomerism in stanozolol solvates

63

Thermal analysis of stanozolol solvates: strength of


intermolecular interaction
Discussion

65
72

Chapter 4: Crystal Growth of Pure Form not Available From


Solution: Application to Ethinylstradiol
Introduction:
Crystalline forms of ethinylestradiol
Experimental Section:

73
74
74
75

Crystallization of ethinylestradiol

75

Crystallization of solvated forms of ethinylestradiol

76

Results:

78

Polymorphism in the crystal structures of ethinylestradiol 78


ii

Structural diversity of ethinylestradiol solvates

82

Molecular packing and hydrogen bonding of


ethinylestradiol solvates

89

Unused Hydrogen Bonding Capacity in Steroid Crystal


Structures

91

Discussion

92

Chapter 5: Detection of Bending Properties of Organic Crystals:


Application to Naftazone and 1,3-Dinitrobenzene

93

Introduction: Bending phenomena of molecular crystals

94

Experimental Section:

95

Synthesis of naftazone

95

Crystal growth of naftazone and 1,3-dinitrobenzene

95

Results:

97

Detection of bending properties of naftazone

97

Detection of bending properties of 1,3-dinitrobenzene

99

Discussion

101

Chapter 6: Combined Synthesis, by Thermal Transformation,


and Crystal Growth of
p-(phenylsulfonyl)biphenyls

102

Introduction

103

Experimental Section:

104

Synthesis of 1-[(1E,3E,5E)-4,6-bis(phenylsulfonyl)
hexa-1,3,5-trien-1-yl]-4-benzene, OMe and NO2
derivatives

104

Crystallization of 1-[(1E,3E,5E)-4,6-bis(phenylsulfonyl)
hexa-1,3,5-trien-1-yl]-4-benzene, OMe and NO2
derivatives

104

Synthesis and crystal growth of 4-(phenylsulfonyl)


biphenyl, OMe and NO2 derivatives

106
iii

Results:

108

Combined synthesis, by thermal transformation,


and crystal growth

108

Analysis of intra-molecular interactions

109

Discussion

115

Chapter 7: Using Driving Force to Control Crystal Morphology:


Application to Metal - Free Phthalocyanine,
1,4-Naphthaquinone and Benzoic Acid

116

Introduction

117

Experimental Section

118

Results:

119

Application to metal-free phthalocyanine

119

Application to 1,4-naphthaquinone

120

Application to benzoic acid

123

Application to tetraphenyltin

124

Discussion

Chapter 8: Crystallographic Data: Electronic Information

125

126

1) Stanozolol, polymorph 1 (stanozolol_1.cif):


17-hydroxy-17-methylandrostano[3, 2-c]pyrazole

127

2) Stanozolol, polymorph 2 (stanozolol_2.cif):


17-hydroxy-17-methylandrostano[3, 2-c]pyrazole

137

3) Stanozolol ethanol solvate (stanozolol_3.cif)

147

4) Stanozolol isopropanol solvate (stanozolol_4.cif)

153

5) Stanozolol butan-2-ol solvate (stanozolol_5.cif)

160

6) Stanozolol ethanol dihydrate solvate (stanozolol_6.cif)

167

7) Stanozolol isopropanol dihydrate solvate (stanozolol_7.cif)

177

8) Stanozolol monohydrate (stanozolol_8.cif)

184

9) Stanozolol acetic acid solvate (stanozolol_9.cif)

190

10) Stanozolol formamide solvate (stanozolol_10.cif)

197
iv

11) Stanozolol pyridine solvate (stanozolol_11.cif)

207

12) Stanozolol dimethylformamide solvate (stanozolol_12.cif)

217

13) Ethinylestradiol: (EE_1.cif)


19-Nor-17-pregna-1,3,5(10)-trien-20-yne-3,17-diol

227

14) Ethinylestradiol acetone solvate (EE_2.cif)

235

15) Ethinylestradiol pentan-2-ol solvate (EE_3.cif)

241

16) Ethinylestradiol DMSO solvate (EE_4.cif)

247

17) 1-[(1E,3E,5E)-4,6-bis(phenylsulfonyl)hexa-1,3,5trien-1-yl]-4-benzene (phsulf_1.cif)

254

18) 1-[(1E,3E,5E)-4,6-bis(phenylsulfonyl)hexa-1,3,5trien-1-yl]-4-methoxybenzene (phsulf_2.cif)

260

19) 1-[(1E,3E,5E)-4,6-bis(phenylylsulfonyl)hexa-1,3,5trien-1-yl]-4-nitrobenzene (phsulf_3.cif)

266

20) 4-(phenylsulfonyl)biphenyl (phsulf_11.cif)

273

21) 4-methoxybiphen-4-yl phenyl sulphone (phsulf_22.cif)

278

22) 4-nitrobiphen-4-yl phenyl sulphone (phsulf_33.cif)

283

23) 1,4-naphthaquinone (14naph.cif)

288

Bibliography

292

Publications

302

Aim of Thesis
Crystals of pure organic materials are often grown by methods fundamentally
based on crystallization from solution. A range of factors affect the process of
nucleation and crystal growth in solution. The solvent can influence the crystal habit
and impurities which are always present may cause crystallization difficulties by
acting as nucleation and crystal growth inhibitors. Indeed some compounds are
known to be difficult to crystallize in any other than a solvated form. Sometimes
crystallization from solution may even require the use of additives to induce crystal
growth. These additives and the concentration at which nucleation occurs can also
affect the nature of the product obtained. All of these problems are avoided when
crystals are grown from the gas phase.
It is estimated that approximately two-thirds of all organic compounds are
able to convert from the solid to the gaseous state on heating. However, sublimation
is not normally a first choice crystallization method despite the wide range of
experimental setups that has been developed for crystal growth from the vapour. The
aim of this thesis was to develop a convenient and rapid sublimation based technique
that can be easily implemented in any chemistry laboratory for crystal growth of
organic compounds.

vi

Abstract
A sublimation method based on the use of a conventional vacuum oven was
developed for growing high quality single crystals of organic compounds suitable for
structure determination. Key features of the method are the use of a low thermal
gradient which favours the growth of large crystals and the use of vacuum which is
ideal for air sensitive compounds. Crystals grown from the vapour are not affected
by solvent effects and impurities have far less influence than when crystals are grown
from solution. This low temperature gradient sublimation in vacuo technique was
successfully applied to: compounds which give only solvated crystals from solution
crystallization; fragile crystals which can be bent on the application of mechanical
stress and systems whose crystal habit is influenced by the crystallization driving
force. It was also possible to combine thermal transformation and crystal growth for
some 1-[(1E,3E,5E)-4,6-bis(phenylsulfonyl)hexa-1,3,5-trien-1-yl]-4-benzenes which
gave crystals of the corresponding 4-(phenylsulfonyl)biphenyls.
Stanozolol and ethinylestradiol are two important steroids which before this
work were known only as solvates but are shown here to have two polymorphs and
just one crystal form respectively when crystallized from the vapour. Solution
crystallization experiments run in parallel gave a wide range of solvated structures.
All crystalline forms of stanozolol and ethinylestradiol were analysed using
diffraction techniques (single crystal X-ray diffraction and powder X-ray diffraction)
and thermal methods (differential scanning calorimetry and thermogravimetric
analysis). Infrared spectroscopy was additionally used for the characterisation and
identification of polymorphic forms.
Crystal growth using the sublimation method also provides easy detection of
the bending properties of molecular crystals. Crystal faces of naftazone and 1,3dinitrobenzene when grown by sublimation tend to be curved in the bending
direction. This effect is not observed for solution grown crystals. These bent crystals
can be easily detected using optical microscopy.
Crystal growth of 1,4-naphthaquinone, metal-free phthalocyanine and
benzoic acid from the vapour was investigated under a range of crystallization
driving forces. The results show that the crystal habit of planar molecules, which

vii

have stacked structures and no directional intermolecular interactions, strongly


depends on crystallization driving force.

viii

Acknowledgements

Firstly I would like to express my gratitude to Prof. Patrick McArdle for his
expertise, guidance and for all stimulating discussions throughout the course of my
work. It was a great pleasure and privilege to work with you!
I am very grateful to Dr. Andrea Erxleben for all discussions, valuable
suggestions and help with my project.
I also wish to thank Prof. Paul V. Murphy and Dr. Fawaz Aldabbagh for their
assistance in explaining reaction mechanisms. To Dr. Liam Carroll for training and
providing his expertise in SEM.
Many thanks to the technical staff in NUI, Galway for their assistance. I
would especially like to thank Seamus Kellehan for all the help with setting up the
sublimation equipment and Dermot McGrath for running all the DSC-TG
experiments.
A big thanks to the SSPC group in NUIG, especially Michelle Hennigan and
Nicole Walsh for many motivating conversations, support and advice. It was a lot of
fun to work with you! Also, thanks to the Woods group for allowing me to marry
into their group.
Finally to my family, to my husband Oliver, thanks for the encouragement
and for making everything so much easier. Thanks to my Mum and Dad who always
believe in me. To Conor, Katie and Alanna for being so cute and Patricia, Colm,
Jenny, Rachel and Claire for your wonderful support over the last few years!

ix

List of Publications
17-Hydroxy-17-methylandrostano[3,2-c]pyrazole, Stanozolol: The Crystal
Structures of Polymorphs 1 and 2 and 10 Solvates; Jolanta Karpinska, Andrea
Erxleben, and Patrick McArdle; Crystal Growth & Design, 2011, 11 (7), pp 2829
2838;
Ethyl [2-(4-phenoxyphenoxy)ethyl]carbamate; Jolanta Karpinska, Manuel Kuhs,
Ake Rasmuson, Andrea Erxleben and Patrick McArdle; Acta Crystallographica,
2012, Section E68, o2834-o2835;

Manuscripts in Preparation
Applications of Low Temperature Gradient Sublimation in Vacuo: Rapid
Production of High Quality Crystals; The First Solvent Free Crystals of Ethinyl
Estradiol and Crystal Habit Control of Flat Molecule Systems which have
Stacked Structures; Jolanta Karpinska, Andrea Erxleben and Patrick McArdle; for
Cryst. Growth & Design;
Crystallization properties of Fenoxycarb; Manuel Kuhs, Jacek Zeglinski,
Michael Svard, Jolanta Karpinska, Patrick McArdle and Ake Rasmuson;

Additional Papers and Conference Contribution


Acetic anhydride mediated condensation of aromatic o-diacid dichlorides with
benzimidazoles to provide electro-reducible p-dione adducts; Eamonn Joyce, Paul
Kavanagh, Dnal Leech, Jolanta Karpinska, Patrick McArdle, Fawaz Aldabbagh;

Tetrahedron Letters, Volume 53, Issue 29, pp 37883791;


Crystal Growth by Low Thermal Gradient Sublimation; Oral presentation at
10th International Workshop on Crystal Growth of Organic Materials CGOM10;
University of Limerick, Limerick, Ireland;
x

Crystal Growth by Low Thermal Gradient Sublimation: Sublimation


Combines the Synthesis, by Thermal Transformation, and Crystal Growth of
Diphenyl Phenyl Sulfones; Poster presentation at CGOM10; University of
Limerick, Limerick, Ireland;
Using crystallization driving force to control crystal morphology; Poster
presentation at CGOM10; University of Limerick, Limerick, Ireland;
Crystal growth using low temperature gradient sublimation in vacuo; Oral
presentation at the 2011 Eli Lilly Chemistry Postgraduate symposium in Galway,
National University of Ireland, Galway, Ireland;
Crystal growth using low temperature gradient sublimation; Poster
presentation at XXII International Congress and General Assembly of the IUCr (Aug
2011) in Municipal Conference Centre, Madrid, Spain;
Unused hydrogen bonding capacity in the crystal structures of steroid
compounds; Poster presentation at 2011 Spring Meeting of the British
Crystallographic Association; University of Keele, England;
Crystal growth of steroid compounds via LTGSV; Oral presentation at SSPC
Technical meeting, University of Limerick, Limerick, Ireland;
17-hydroxy-17 methylandrostano[3,2-c]pyrazole, Stanozolol : the crystal
structures of polymorph I and ten solvates; Poster presentation at 9th International
Workshop on Crystal Growth of Organic Materials (CGOM9); School of Chemical
and Biomedical Engineering, Nanyang Technological University, Singapore;

xi

Abbreviations
Abbreviations

Description

0D, 1D, 2D, 3D

Zero, One, Two and Three-Dimensional

API

Active Pharmaceutical Ingredient

ATR-IR

Attenuated Total Reflectance-Infrared Spectroscopy

CCDC

Cambridge Crystallographic Data Centre

CSD

Cambridge Structural Database

DMF

N,n-Dimethylformamide

DMSO

Dimethyl Sulfoxide

DSC

Differential Scanning Calorimetry

EDX

Energy Dispersive X-ray

EE

Ethinylestradiol

FT-FIR

Fourier Transform Far Infrared Spectroscopy

FT-IR

Fourier Transform Infrared Spectroscopy

H-bond

Hydrogen Bond

IUCr

International Union of Crystallography

LTGSV

Low Temperature Gradient Sublimation in the Vacuum

NO2

Nitro

OMe

Methoxy

SEM

Scanning Electron Microscopy

Temperature

TPT

Tetraphenyltin

TGA

Thermal Gravimetric Analysis

THF

Tetrahydrofuran

xii

PhEur

Pharmacopoeia European

PXRD

X-Ray Powder Diffraction

ROY

5-methyl-2-[(2-nitrophenyl)amino]-3-thiophenecarbonitrile

xiii

Symbols and Terms used in Crystallography


Symbols

Description

a, b, c

Vectors of the edges of the unit cell

, ,

Angles between the edges of the unit cell

V / 3

Cell volume

x, y, z

Coordination of a point expressed in units of a, b, c

h, k, l

Crystal face indices, also known as Miller indices

Number of molecules in the unit cell

/ mm-1

Absorption coefficient

Wavelength

/ [Mg/m-3]

Density

U11, Uii, Uij

Anisotropic vibrational parameter

Mw / [g/mol]

Molecular weight

F(000)

Total number of electrons in the unit cell


It is a mathematical function describing the amplitude and
phase of a wave diffracted from crystal lattice planes

F(hkl)

characterised by Miller indices h, k, l

|F(hkl)|, |F|

Amplitude of structure factor without phase indication

|FO| and |FC|

Observed and calculated structure factors


A measure of agreement based on F between the calculated
and observed model

R1 (I > 2(I))
Reliability index
wR2

A measure of agreement based on F2 between the

xiv

calculated and observed model which takes into account


the errors in (r) during refinement

A measure of the extent to which calculated model


approaches the observed values. Ideally it is expected to be
close to unity.

GooF

xv

Chapter 1:
Theory

Crystalline solids
Crystalline solids can be described in terms of atoms, molecules or ions
which are arranged in regular systematic 3D patterns [1, 2]. They can exist in
different crystalline forms such as polymorphs and solvates (the latter are also known
as pseudo-polymorphs). Polymorphs are single component solid forms, while
solvates contain more than one constituent in the crystal structure, Fig. 1.1 [3].
Differences in the molecular arrangement of polymorphs, or the chemical
composition in the case of solvates, vary the inter- and intra-molecular interactions.
These differences lead to changes in the chemical and physical properties which are
especially important to the pharmaceutical industry.

Fig. 1.1 Crystalline forms of an API: (a) pure API, (b) polymorphic form of an API,
(c) clathrate or solvate of an API, (d) solvated form of an API.

The energy differences between polymorphic forms are usually quite small
making it easy to generate a new form unintentionally. The various steps of drug
processing and development in particular create a variety of opportunities for phase
transformation, solvate formation, solvate desolvatation or a change in the degree of
crystallinity. Since form conversion may also take place during storage or use, drug
stability is a major concern for the pharmaceutical industry. Appearance of a new,
more stable crystalline form during late stage of development can cause product
delay or even API withdrawal [4].

Every compound has different polymorphic forms, and that, in general, the number
of forms known for a given compound is proportional to the time and money spent in
research on that compound
McCrone, 1963 [5]

Insufficient understanding of solid-state properties has led to problematic


situations in the past. Sometimes it is not possible to continue the production of a
polymorph of interest due to the occurrence of a more stable form. In this situation
the less stable polymorphs are often referred to as disappearing polymorphs [6]. A
well-known example is the sudden occurrence of a new polymorphic form of
Ritonavir, once used to treat Acquired Immunodeficiency Syndrome (AIDS) [7]. The
lower solubility and bioavailability of the new stable form forced Abbott
Laboratories Ltd. to withdraw the drug from sale. It required a lot of time and effort
before they were able to reproduce the original polymorph [8]. Sometimes the
change in impurity profile can lead to disappearing polymorphs as in the case of the
female steroid hormone; progesterone [9]. After some time in production the
metastable polymorph of this compound could no longer be produced. The analysis
of a fifty-year old sample revealed the presence of eleven impurities, including
another steroid compound which had been added during the synthesis to enhance
crystal growth. Some of these factors were responsible for the stabilisation of
metastable form II. Appearance of a new crystalline forms or a phase change results
in differences in dissolution rate, oral absorption, bioavailability, toxicology and
ultimately clinical trial results. Therefore early isolation and characterisation of all
possible crystalline forms of a drug compound is a major concern for the
pharmaceutical industry.
In the chemistry of crystalline solids the main focus is to understand
polymorphism and pseudo-polymorphism at a molecular level. Knowledge of how
molecules interact with each other and how they arrange and pack to form 3D
structures helps in the prediction and preparation of the most stable form of a given
compound. Also, an understanding of the physicochemical properties of crystalline
solids is crucial to the selection of the most stable form for development of
successful pharmaceutical products.

Polymorphism
It is thought that Klaproth was the first to be aware of polymorphism when he
observed in 1788 that calcium carbonate can crystallize as calcite and aragonite [10].
In 1809 Humphrey Davy made a remark that diamond and graphite are both carbon
and they only differ in the arrangement of carbon atoms in the solid state. However,
the term polymorphism was first coined in 1822 by Eilhard Mitscherlich during his
work on the isomorphous sulphates of cobalt, copper, iron, magnesium, manganese,
nickel and zinc [11, 12]. In 1965 McCrone [5] defined polymorphism as:
A solid crystalline phase of a given compound resulting from the possibility of at
least two different arrangements of the molecule of that compound in the solid state.

In other words it is the ability of a compound to exist in two or more crystalline


phases with different conformations and/or crystal packing giving rise to a variety of
crystal structures. As a consequence, polymorphs have different chemical and
physical properties. These differences vanish in the liquid and vapour phase [13].
Structural diversity of polymorphic compounds which results in different
crystal lattices arises from packing polymorphism and conformational polymorphism.
Packing polymorphism takes place when relatively rigid molecules can pack into
different 3D structures [14-16]. Often organic molecules can exist in a variety of
different conformations. This also results in different 3D structures when molecules
pack to form a crystal. Conformational polymorphism can be therefore defined as the
existence of different conformers of the same molecule in different polymorphic
modifications [17-19]. To describe situations when organic molecules in
polymorphic systems can exist as geometric isomers or tautomers the term
configurational polymorphism was introduced [20]. In some cases it is not clear
whether a system should be recognised as having packing or conformational
polymorphism because the differences in packing influence the geometry of the
molecule and the different conformations make the molecules pack differently.
Therefore it is common that polymorphic systems have a mixed origin as they exhibit
both packing and conformational differences [21].

In 1888 terms such as monotropy and enantiotropy were introduced by


Lehmann to describe the relative thermodynamic stability of polymorphic systems
[22]. When one polymorph is stable at all temperatures below the melting point,
while all other polymorphs are unstable, the system is monotropic [23, 24]. This
means that the free energy curves for each of the polymorphs do no cross and
therefore no reversible transition can take place below the melting point. In contrary,
in other polymorphic systems these free energy curves cross, meaning that their
relative stabilities are reversed at a particular temperature. This is characteristic for
enantiotropic polymorphs [25].
It was estimated that in pharmaceuticals 70% of barbiturates, 60% of
sulphonamides and 23% of steroids exist in different polymorphic forms. 5-methyl2-[(2-nitrophenyl)amino]-3-thiophenecarbonitrile (ROY) is the top polymorphic
system with seven determined crystal structures and three other polymorphic forms
observed using Raman spectroscopy, Fig. 1.2 [26, 27].

Fig. 1.2 Polymorphism of 5-methyl-2-[(2-nitrophenyl)amino]-3thiophenecarbonitrile, also known as ROY for red, orange and yellow crystals.

The discovery of all the potential polymorphic forms requires extensive


crystallization studies. Many factors which influence the relative nucleation and
5

growth rates need to be examined. To obtain different forms of the same compound a
variety of methods are available, such as: crystallization from single or mixed
solvents, sublimation, cooling from the melt, thermal treatment, vapour diffusion,
grinding or desolvatation of crystalline solvates. Crystallization from solution may
involve pH adjustment, the presence of tailor-made additives and the adjustment of
experimental conditions like temperature, initial supersaturation and rate of agitation
[28]. Crystallization is a multi-step process which involves nucleation, crystal growth
and Ostwald ripening [29] of the crystals. Both nucleation and crystal growth
determine the nature of the polymorphic form that will be formed from solvent
crystallization.

Pseudo-polymorphism
Substances are often exposed to solvents or solvent vapour during different
stages of industrial processing. In the pharmaceutical industry the most common
solvent-based processes include: wet granulation, spray-drying, lyophilisation,
precipitation, crystallization and recrystallization. Solvent molecules are often found
to co-crystallize with the mother compound. They are likely to affect crystal packing
and molecular conformation and for these reasons are sometimes considered as
unwanted impurities [30]. However solvent molecules often play an important role in
the crystal structures. They can act as H-bond donors or acceptors contributing to the
formation of the H-bonding network. If either the molecule or the crystal structure
contains voids or empty channels due to the crystal packing, solvent molecules tend
to fill these empty spaces. Some solvent molecules have both hydrophobic and
hydrophilic parts and they can be used as bridges between polar and non-polar
regions. In coordination chemistry they frequently act as ligands, completing the
coordination sphere of the metal ion [30].
Solvates are defined as crystalline solids of a compound in which solvent
molecules are present as an integral part of the crystal structure [31]. If the
incorporated solvent is water then it is referred to as a hydrate. Some solvates of the
same substance have the ability to crystallize in identical crystal structures [32-34].
Molecules in these isostructural (isomorphous) solvates are arranged in the same
manner forming identical intermolecular interactions and crystallizing in the same

space group. Only relatively small differences can be observed in the unit cell
dimensions if the systems remain isomorphous. Often molecules of the same solvent
can be incorporated in the crystal lattice in different proportions forming solvates
with different stoichiometic ratios. Like other organic compounds some solvates may
exhibit

polymorphism

themselves.

They

have

identical

components

and

stoichiometry ratio but different packing arrangements. This was demonstrated for
three monohydrates of tranilast [35], two hydrates of succinyl sulfathiazole [36] and
two hydrates of oxazepam [37]. The case of indantrione 1,2-dioxime is particularly
interesting as the compound is capable of forming polymorphic solvates with
different stochiometic ratios: 1:1 and 1:2 with methanol and 1:1 with ethanol [38].
Sometimes crystallization from a wet solvent or a solvent mixture may lead to the
formation of a crystal with more than one type of solvent molecule included in the
structure. These types of solvates are also known as heterosolvates [39].
Solvates were once obtained unintentionally during various solvent based
crystallization or purification processes [40]. Nowadays to satisfy regulatory
authorities [41] it has become essential to find every possible crystalline form of an
API in systematic polymorph screenings. Although some organic solvents of
solvated crystals are classified as unsafe they can be ideal precursors for the
development of a desired polymorphic form [42, 43]. In contrast, solvates containing
non-toxic organic solvents may have a higher solubility than the pure form which
could improve the bioavailability and dissolution rate of an API [44].
CSD provides valuable information on the solvent-forming properties of
organic compounds [45]. An analysis of every entry containing solvent molecules
has been performed by many researchers [39, 46]. It was shown that water, with
more than 11,000 hits, is the most common solvent incorporated in the crystal
structures of solvated forms. Approximately 2,800 hits were found for
dichloromethane and about 1,000 to 1,400 hits for other solvents (methanol, benzene,
ethanol and acetone). Among pharmaceutically relevant organic compounds listed in
the 4.02 edition of Pharmacopoeia European (PhEur) it was found that 36% may
exist in different polymorphic forms, 29% occur as hydrates and 10% are known to
form solvates [47]. All statistics place water molecule as a top solvate forming
solvent. This can be attributed to some specific features of this molecule. Water can
easily fit into even small structural voids due to the small size. The multidirectional

H-bonding capability is also responsible for the inclusion of water molecule into the
crystal structures of APIs.
Many classification systems have been developed for hydrates in the past.
Most of them are based on the location of the water molecule in the crystal lattice
and were introduced by Jeffrey, Clark and Morris [48]. These include: isolated site
hydrates, channel hydrates and ion associated hydrates. The first category represents
hydrates where water molecules are isolated from direct contact with other water
molecules by intervening drug molecules. The second category describes hydrates
with water molecules arranged next to each other forming channels through the
crystal structure. This category is further subdivided into expanded channels and
planar hydrates. Expanded channels may increase or contract the lattice volume by
absorbing or desorbing moisture depending on the humidity conditions. In planar
hydrates water molecules are arranged in 2D order forming planes in the crystal
lattice. The ion-associated hydrates belong to the third category of crystalline
hydrates in which water molecules are coordinated to a metal ion. Another
classification which does not require knowledge of the crystal structure was given by
Gal, Kuhnert-Brandstatter and Grimm [49]. It is based on the thermal behaviour of
organic hydrates. The most recent model which takes into account the mechanism
and structural changes upon dehydration was proposed by Petit and Coquerel [50].

Nucleation and Crystal Growth


Nucleation
Crystal nucleation is a key factor in controlling many properties of the
appearing crystalline phase [51]. The ability to control this preliminary stage of
crystal growth allows control of polymorphism and the size and distribution of
crystals.
Nucleation is a process which leads to the creation of a new crystalline entity
[52]. It is defined as a series of atomic or molecular events which cause the
rearrangement of atoms or molecules into a cluster according to the scheme:

A + A = A2
A2 + A = A3

An-1 + A = An (cluster)
This cluster, also known as a nucleus or critical nuclei, must have the ability to grow
irreversibly to a macroscopically large size. The size and the frequency of critical
nuclei strongly depend on the conditions within the crystallization medium.
The absence of foreign particles or crystals in the crystallization media is
known as homogeneous nucleation. In contrast, heterogeneous nucleation takes place
in the presence of foreign particles or surfaces which can encourage the formation of
nuclei at supersaturations lower than required for homogeneous nucleation.
Heterogeneous nucleation is more likely to occur since it is practically impossible to
perform crystallization experiments free from foreign bodies. Both types of
mechanism are referred to as primary nucleation. Formations of new crystals can be
induced by the presence of the crystals, also referred to as seeds, of the same
substance. This mechanism, known as secondary nucleation, is more favourable than
both homogeneous and heterogeneous primary nucleation and thus it occurs at lower
supersaturation.

Nucleation in polymorphic systems: rule of stages


In 1897, for compounds which can crystallize in more than one form
(polymorphs or solvates), Ostwald developed the Rule of Stages [53, 54]:
When leaving a given state and in transforming to another state, the state which is
sought out is not the thermodynamically stable one, but the state nearest in stability
to the original state.

This means that the crystallizing system advances from the supersaturated state to
equilibrium in stages with the smallest possible change in free energy, Fig. 1.3.
Hence, before the crystals of the most stable form appear, a polymorphic compound
will form every possible metastable form. The Rule of stages is a general rule, based
on the observation of many polymorphic systems, thus there are many exceptions
known [55].

Fig. 1.3 Schematic representation of Ostwald Rule of Stages with form 1 being the
least stable and form 4 the most stable polymorph.

Crystal growth
Following the nucleation step, crystals continue to grow, reaching a visible
size. Growth occurs when the amount of atoms leaving the growth medium and
joining the crystal surface is greater than the amount of atoms leaving the crystal
10

surface and going back into the growth medium. For crystals to grow a driving force
is necessary. According to the law of thermodynamics during the crystallization
process a decrease in free energy is required to promote crystal growth. The
difference between the chemical potential m of the growth medium (solution, melt,
vapor) and the chemical potential c of the crystalline phase is defined as the driving
force:
= m - c
If the growth medium is vapour the level of supersaturation becomes the driving
force as the crystals grow when the vapour pressure is higher than the equilibrium or
saturated vapour pressure.
On an atomic scale the growth surface of a crystal is irregular. It contains
many kinks, free vacancies and unfinished atomic layers which may be used by
atoms joining the crystal surface, Fig. 1.4 [56]. Kinks and edges are more likely to be
occupied by an atom. This is due to the larger contact surface. Some atoms might be
placed directly in favoured positions but most of them will have to migrate through
the crystal surface to find such a site.

Fig. 1.4 Kossel model of a crystal surface.

Many attempts have been made to explain the mechanism and rate of crystal
growth. This includes the surface energy theory, diffusion theory, adsorption layer
theory and screw dislocation theory [57, 58]. Surface energy theories were originated
by Gibbs (1878) and Curie (1885) and according to their hypothesis the growing
crystal assumed that shape for which the surface energy is lowest. Noyes, Whitney
(1897) and Nernst (1904) gave rise to diffusion theories which presume that the
11

substance is deposited constantly on a crystal face at a rate proportional to the


difference in concentration between deposition point and the bulk of solution. In
1922 Volmer proposed that crystal growth is a discontinuous process where crystal
surfaces grow by adsorption in a layer by layer mode. This is known as adsorption
layer theory and modifications were suggested by Kossel and Stranski. The screw
dislocation theory, also known as BCF theory, was first developed by F. C. Frank
(1949) and further analysed by W. K. Burton, N. Cabrera and F. C. Frank. Growth on
a crystal surface can occur by one of the following mechanisms: continuous growth,
surface nucleation or spiral growth.

Continuous growth
In the continuous model the surface of the crystal is molecularly rough and
retains this form during the crystal growth [53]. The energy which is essential to
form a new step is low thus the crystal surface contains many growth sites such as
kink and step sites, Fig 1.5 [59]. These kinks and steps are randomly distributed over
the crystal surface and are used as growth positions for arriving units.

Fig. 1.5 Rough crystal surface during the continuous growth model.

Surface nucleation
Surface nucleation mechanisms originate from adsorption layer theory [60].
Growth patterns of surface nucleation can be classified into two mechanisms. The
first one is known as layer by layer growth or single nucleation growth, where one
2D nucleus spreading over the whole crystal surface is responsible for the growth of
12

a single layer. A modification of this mechanism occurs when the nucleation rate is
faster than the time needed to form one layer on the crystal surface. Many nuclei
which appear all over the surface spread and combine into a layer. This type of
mechanism is known as multinucleation growth. 2D nuclei can also form all over the
surface and on top of existing nuclei which already started to spread contributing to
the growth of multiple layers simultaneously. This growth pattern is known as
multinucleation multilayer growth or birth and spread, Fig. 1.6 [61].

Fig. 1.6 The creation of the nuclei on a surface during crystal growth by birth and
spread mode.

Spiral growth
An energy barrier associated with 2D nucleation has to be overcome for the
crystal growth to happen [57]. This means that the event should occur at relatively
high supersaturation. However, the growth of 2D nuclei was observed at a low level
of supersaturation and this could not be explained using Volmer, Kossel and Stranski
theory. Hence F. C. Frank proposed the presence of screw dislocations as a result of
a continuous source of steps which promote crystal growth [62].
A dislocation is a consequence of stress that arises during crystal growth [63].
Screw dislocation is a line defect which, when exposed to the crystal surface, creates
a step, giving a rise to the spiral growth pattern, Fig. 1.7 [64]. As the dislocation is a
source of a step, this growth mechanism requires less energy than continuous or
surface nucleation growth and thus it will occur at low supersaturation, generating
13

spiral patterns around the dislocation centre. As a result of spiral growth each crystal
can have a unique growth rate based on the specific dislocation structure.

Fig.1.7 Formation and progress of spiral growth by screw dislocation mechanism.

14

Crystallization Methods
In general crystal growth can take place from solution, melt or vapour [65].
The choice of crystallization technique has the most important influence on the
nature and form of the obtained material and is often limited by the small amount of
sample [13, 58]. Crystallization processes are sensitive to many factors [66]. These
include the type of solvent used, initial saturation, impurities, additives, rate of
cooling, temperature of crystallization and temperature gradient. If conditions such
as pressure, temperature or supersaturation within a medium are changing too rapidly
it might not be possible to obtain a crystalline material [67]. A formation of
amorphous or glassy matter will take place instead. In some cases under constant
crystallization conditions, even if the solid is formed, spontaneous nucleation will
only occur after seeding.
Many classical crystallization methods [68] such as slow evaporation from a
single

or

mixture

of

solvents,

rapid

cooling,

precipitation

(anti-solvent

crystallization), vapour diffusion, slurry ripening and lyophilization require the use
of solvent. Other methods which are often employed for crystal growth of organic
compounds include crystallization from melt, heat induced transformation,
sublimation and desolvatation of solvates. Newer techniques have also been
developed and successfully applied to generate metastable polymorphic forms:
capillary crystallization [69], epitaxial matching [70, 71], laser-induced nucleation
[72], supercritical fluid crystallization [73] and ultrasound [74]. The work included in
this thesis is focused on crystal growth from the vapour, therefore sublimation
methods will be reviewed in more detail.

Solvent crystallization
Crystallization from solution takes place below the melting point of
crystallized matter, therefore it is the method of choice for compounds which are not
thermally stable [58, 75]. Crystals grow freely in solution and their faces are not
affected by contact with foreign surfaces, which can often allow optical recognition
of crystallographic axes. However, sometimes the presence of solvent may lead to

15

the formation of an undesired solvate [30]. Also, specific solvent interaction may
have an effect on nucleation or the crystal morphology.
Some polymorphs are sensitive to the type of solvent used, as in the case of
sulfathiazole form I, which was found to be stabilized by the use of 1-propanol or 1butanol. Both solvents inhibit the formation of the -dimer which is required for
nucleation and transformation into forms II and IV [76].
Many methods have been developed for crystal growth from solution. The
simplest is slow evaporation of solvent from solution at room temperature.
Minimalization of nucleation sites results in larger crystals. This can be achieved by
initial filtration, the use of unscratched flasks and a constant temperature. Slow
evaporation of solvent may take several weeks depending on the type and scale of
the performed crystallization. Sometimes, to minimise the chances of solvent
inclusion, mixtures of solvents are used for slow evaporation or for cooling supersaturated solutions. This was demonstrated in the co-crystallization of carbamazepine
and nineteen co-crystal formers [77].
Cooling of hot super-saturated solutions is also a common approach in
solvent based crystallization methods [78]. The use of stirred vessels aids the
production of uniform crystals. Although larger amounts of compounds are required
(as not all of the compound will crystallize), this method is more suited for the
growth of single crystals because the level of super-saturation can be more closely
controlled than in a slow evaporation process [58].
Vapour diffusion requires the presence of two solvents. The solute solution in
an open container is placed in a larger sealed vessel which contains a miscible and
volatile anti-solvent (i.e. a solvent in which the compound has little or no solubility)
[79, 80]. As the anti-solvent diffuses into the solute solution, saturation is achieved
forcing the nucleation and crystal growth. This method is often used for growing
large single crystals for structure determination [80].

Vapour crystallization
Sublimation is defined as a direct transition of a solid to a vapour without
passing through the liquid phase [81]. Approximately two-thirds of all organic
compounds are able to convert from solid to gas state on heating [82]. Vapour

16

growth gives solvent free crystals with well-defined faces. The temperatures at which
compounds sublime and crystallize, the distance between the sublimed compound
and the condensation area, the pressure and the type of collecting surface all have a
great influence on the size, habit and form of the grown crystals [82, 83]. Also, slow
growth rates and clean surfaces with a low level of nucleation sites contribute to the
growth of large crystals with low dislocation content. Very slow growth rates which
favour high quality crystals can be achieved using small temperature gradients in the
sublimation equipment [84].
The type of polymorph formed depends on the sublimation temperature, with
high temperatures favouring stable forms and low temperatures yielding unstable or
metastable crystals. It is possible to adjust crystallization conditions in order to
obtain crystals of one polymorphic form however, mixtures of several polymorphs
are often found to crystallize together [85]. Concomitant sublimation takes place
when polymorphs have similar vapour pressures at a particular temperature. This
often happens near the temperature of polymorphic transition.
Generally sublimation methods can be classified into three groups [86]:
simple, vacuum and entrainer. Simple sublimation is the most common type of
crystal growth from the vapour phase. The compound changes phase from solid to
vapour upon heating and diffuses towards the condensation area. The difference in
partial pressures between the vaporised and condensed matter is the driving force for
diffusion. In vacuum sublimation the transport of vapour onto the condenser is
increased by reducing the pressure which further increases the partial pressure
driving force. Entrained sublimation is also known as carrier sublimation due to the
use of inert gases. They enhance the rate of flow of vapour and thus increase the
yield of condensed matter.
A wide variety of experimental apparatus types have been developed over the
years for growing crystals from the gas phase. The most common is the use of a cold
finger. A horizontal glass tube was applied for the crystallization and crystal habit
control of succinic acid polymorphs [87]. Sealed tubes are used for the preparation of
metals (zinc and cadmium) and non-metallic sulphides [88]. Silver halide crystals
can be grown in quartz tubes on copper and quartz substrates [89]. A train
sublimation system was developed and applied to the purification of organic
pigments [90]. Two and three zone furnaces were employed to control and maintain

17

a temperature gradient and to keep a constant rate of sublimation during the growth
of single crystals [91].
Crystals obtained by sublimation are often used as seeds in solution phase
crystallization on a larger scale.

Melt crystallization
Melt refers to a liquid state of matter close to its freezing point. Crystal
growth from the melt is only suitable for thermally stable compounds. Also, it is not
possible to grow mixed crystals of uniform composition [92].
Melt crystallization can be used to obtain meta-stable forms of polymorphic
systems [93]. Often, super-cooling of melts first give the least stable form which
afterwards transforms into a more stable polymorph. Sometimes quench cooling a
melt can result in the formation of an amorphous solid which undergoes glass
transition and then crystallization upon further heating [94, 95].
The most widely used melt crystallization techniques are divided into four
groups. These include: the pulling (Kyropoulos and Czochralski), crucible, zone
melting and flame fusion techniques. The Kyropoulos and Czochralski methods were
applied to the single crystal growth of many organic and inorganic compounds [96,
97]. These methods require the presence of a seed crystal which in the Kyropoulos
method is allowed to grow into the molten phase and in the Czochralski method is
slowly withdrawn from the molten phase pulling out a growing single crystal. In the
crucible technique a melt is placed in a crucible which is slowly transferred from a
hot to a cold zone. For this purpose a furnace can be used to control the rate of
cooling [98]. The zone refining method also requires presence of a seed and it is
applicable to materials having a large surface tension. Zone refining has the
advantage of producing high purity, dislocation free crystals of organic and inorganic
materials [99, 100]. The flame fusion technique was developed by Verneuil in 1904
for the production of artificial gemstones [101]. Nowadays it is used for the mass
production of jewels and scientific instruments [102, 103].

18

Chapter 2:
Experimental Section

19

Materials
50g of Stanozolol (>98%), 1g of Methandrostenolone (>95%), 5g of
Ethynilestradiol (>98%) and 25g of metal-free phthalocyanine (>93%) were
purchased from TCI Europe. 25g of 1,3-dinitrobenzene (>97%), 5g of
nitrocinnamaldehyde (>97%) and 100g of methoxycinnamaldehyde (>98%) were
obtained from Sigma Aldrich.

Instrumentation and Techniques


Low temperature gradient sublimation in vacuo, method A
A sublimation method for growing high quality single crystals has been
developed. The combination of Low (and very low) Temperature Gradients with
Sublimation in Vacuum, LTGSV, has several important advantages over other
crystallization techniques. Sublimation (which is also a purification technique) gives
high quality single crystals in a few hours (or less) without the necessity of using
solvents. Working in vacuo protects compounds from oxidation and the use of a low
thermal gradient favors the growth of good quality large crystals, suitable for
structure determination. The crystalline form and morphology of the crystals grown
by this method are not affected by solvents and impurities are less important than
when crystals are grown from solution.
Method A which uses the vacuum ovens heater as a temperature source has
been successfully applied to several different classes of compounds. These include
systems for which: 1) crystals of pure forms are not available from solution due to
difficulties with crystal packing, 2) there is a problematic habit when grown from
solution 3) polymorphs are formed and 4) crystals grown from solution are of poor
quality.

20

a)

b)

Fig. 2.1 Containers for growing crystals by low temperature gradient sublimation in
the vacuum.

Crystals of the compounds listed in Table 2.1 were grown in almost closed
containers in a Heraeus VT025 vacutherm oven which was operated at 10-9 GPa
pressure. The two sample container types used for the compounds in Table 2.1 are
shown in Fig. 2.1. The glass sample bottle (25mm diameter), Fig. 2.1 (a), is covered
with aluminium foil (shiny side up) in which a pinhole has been made and crystals
grow on the smooth side of the bottle. In Fig. 2.1 (b) a Petri glass covering a clock
glass is used. The total weight losses observed for stanozolol after 48 hours in the
oven were 4% and 15% respectively. The Petri dish has the significant advantage of
allowing more accurate examination of any crystals grown under a microscope. The
use of smooth surfaces favours growth of large single crystals, whereas scratched
surfaces enhance the level of nucleation which leads to the production of larger
quantities of small crystals. This was demonstrated for methandrostenolone, Fig. 2.2.

Fig. 2.2 Crystals of methandrostenolone grown on scratched and smooth surface.


21

Table 2.1 List of compounds grown by LTGSV.

Compound name

Sublimation
Temp [C]

Benzoic acid***

89

Caffeine

170

Carbamazepine

110

o-chlorobenzoic acid
m-chlorobenzoic acid
p-chlorobenzoic acid
Cholesterol
Ethinyl estradiol
4-hydroxy-N-phenylbenzenesulfonamide
Methandrostenolone
Naftazone
1,4-naphthaquinone***

80

4-Nitro benzoic acid


Oxalic acid
Phenacetin
Phenathraquinone
monosemicarbazide
Phthalocyanine***
Progesterone
ROY
Salicylanilide

Approx. time
required to observe
first crystals*
30 min

100
110
160
115
135

Plates to needles
Needles +
hexagonal
blocks**
Blocks
(From III)
Plates
Plates
Plates
Needles
Needles

135

Plates

12 h

120
160

6h
6h

180
75
95

Blocks
Plates
Blocks to
needles
Plates
Needles
Plates

190

Blocks

8h

475
95

Plates to needles
Blocks

4h
1h

100

Yellow blocks +
Orange needles

4h

> 115
120

Orange needles
Plates

3h
30 min

140

Needles + blocks
(polymorph I +
polymorph II)

12 h

Stanozolol
> 150
Succinic acid
Sulfamerazine
Sulfapirydyne
Sulfathiazole

Crystal Habit

130
180
150
135

Needles
(polymorph I)
Plates
Blocks
Blocks
Blocks

8h
15 min
30 min
35 min
2h
12 h
8h

30 min
12 h
20 min
30 min

6h
5h
8h
6h
24 h

22

(Forms I + II)
Blocks
110
28 h
(Forms III)
* Crystals of suitable size for single crystal X-ray analysis
** Hexagonal crystals were not stable enough at atmospheric pressure for structure
determination
*** External heater was used to create a range of driving forces across the condensation
area

Sublimation in a vacuum oven using an externally controlled heater,


method B

The experimental setup which used two Petri dishes is shown in Fig. 2.3. This
was placed inside a Heraeus VT025 vacutherm oven. Six small holes were drilled in
the pressure relief valve on the rear of the oven. Insulated wires were cemented to the
pressure relief valve using epoxy resin. The six wires were used to connect two
thermocouples and a small heater. The heater was wound onto a 3 x 1 cm ceramic
rod using 70 cm of 0.4 mm nichrome which had a resistance of 4.2

. A variable

voltage transformer was used to control the temperature using voltages in the range
of 15 to 25 volts. The sample was placed in the centre of the Petri dish directly above
the heater. The sublimation temperature was measured using a thermocouple held on
the glass surface in place of the sample by a piece of high temperature tape. The
heater generated a radial temperature gradient illustrated by the colour gradient in
Fig. 2.3. Glass wool was placed around the setup to minimize heat loss and reduce
temperature gradients. The temperature at the walls of the oven did not exceed 100
C at the highest temperatures used.

Fig. 2.3 Sublimation equipment setup showing how the driving force changes across
the condensation area.
23

This setup was applied to the crystal growth of 1,4-naphthaquinone, metalfree phthalocyanine and benzoic acid. In each of the performed experiments it was
observed that the high driving force (in the centre of the Petri dish) promotes
nucleation at the expense of crystal growth. However, towards the edge of the Petri
dish, the nucleation rate is lower and the reduced driving force promotes the growth
of larger crystals.

X-Ray diffraction techniques


X-rays are scattered in all directions when they hit electrons passing through
the matter [104, 105]. However when the matter is crystalline the scattering of the Xrays occurs in specific directions which strictly depend on the nature of the repeating
pattern. This relationship applied in the X-ray diffraction methods provides a
comprehensive description of the arrangement of the atoms in the solid state
structure of crystalline solids.

Single Crystal X-Ray Diffraction


Single X-ray crystallographic studies give the most detailed characterisation
of solid state [106]. The determination of the unit cell reveals the periodicity of the
crystal and the assignment of the phases to the structure factors allows the generation
of the 3D electron density map of the crystal and this gives detailed information
about the structure of small molecules and macromolecules at the atomic level.
However, if it is not possible to grow high quality single crystals for structure
determination powder X-ray diffraction, PXRD, is the method of choice for
polymorph identification and characterisation [107].

An Oxford Diffraction Xcalibur system equipped with Sapphire CCD


detector was used to collect X-ray diffraction data at both ambient temperature and
150K. The crystal structures were solved by direct methods, Shelxs-97, and refined
by full matrix least squares using Shelxl-97 [108]. Both are included in the Oscail
package [109] which was also used for the analysis of crystal packing and
intermolecular interactions. The only twinned crystal structure of 1-[(1E,3E,5E)-4,6-

24

bis(phenylsulfonyl)hexa-1,3,5-trien-1-yl]-4-methoxybenzene was resolved with the


program Rotax [110]. In all cases non-hydrogen atoms were refined anisotropically.
Hydrogen atoms were included in calculated positions except those of the water
molecules in the crystal structures of hydrates, where the hydrogens were refined
with a distance restraint of 0.89. Some of the packing diagrams were produced
using Mercury [111].

Powder X-Ray diffraction (PXRD)


Diffraction from a powder gives essentially the same information as single
crystal X-ray diffraction however the reflection data collapsed onto a line plot of 2
vs. intensity. Thus reflections with identical 2 values are on top of each other. It is
possible to obtain crystal structures from powder data using the Rietveld method but
the work is not trivial nor is it always successful [112]. It should also be pointed out
that PXRD examines more than one crystal and thus gives a better overview of a
sample than results based on just one crystal. Thanks to the specific fingerprints of
microcrystalline

powders

PXRD

is

the

preferred

method

for

routine

polymorph/solvates identification and characterisation. PXRD can also be employed


in quantitative analysis of polymorphic mixtures [113].

Powder diffraction patterns were collected using Inel Equinox 3000 and
Siemens D500 powder diffractometers between 4-90 and 4-40 (2) respectively
using CuK radiation with steps of 0.05. Powder patterns were also calculated using
the atom coordinates by programs within the Oscail package.

PatMatch
Calculated powder patterns were compared using program PatMatch included
in the Oscail package. To compare two PXRD patterns, A and B, program selects n
(usually twelve) peaks with the highest intensity. For those peaks their positions, 2,
and intensities, I, are compared within the errors of 0.85 and 0.70 respectively. The
program reports the number of matching peaks (m) for both PXRD patterns. For
matching peaks the difference in their intensities, I, is calculated: I=IA-IB. For
isomorphous structures this value will be close to zero. Match indices, Match, for
two PXRD patterns are calculated using following equation:
25

Match = 1-(I * Weight),


Weight =

Isomorphous compounds will have match indices > 0.85.

Thermal analysis
The role of thermal analysis is to monitor the properties of the sample against
time or temperature as compounds undergo both physical and chemical changes [12,
37, 114, 115]. These changes include; colour change, sublimation, melting and phase
changes. The factors which affect the kinetics of these processes include particle
size, impurities, crystal shape and presence of polymorphic nuclei. Also the mass and
heating rate of the sample have a direct effect on the resolution of thermal events. A
combination of DSC and TGA is often employed for distinguishing polymorphs and
solvates of pharmaceutical solids [37, 116, 117]. Thermal methods have been applied
in many other areas, such as: polymers, electronics, material science and in quality
control.

Thermogravimetric analysis (TGA)


Thermogravimetric analysis is an analytical technique used to determine the
thermal stability of a sample [107]. The principle is to measure weight changes as a
function of temperature. TGA measurements play an important role in
characterization of solvates and excipients. The main application of TGA is the
determination of solvate stoichiometry which can be calculated from the weight loss
per known amount of analyzed compound [106]. It is also useful in identifying
sublimation and decomposition processes [118, 119]. The key disadvantage of
thermogravimetric analysis is that it does not provide any information about the
nature of the compound and for this reason TGA is often coupled with another
analytical technique.

Differential scanning calorimetry (DSC)

26

DSC measures the amount of energy that is absorbed (endothermic event) and
released (exothermic event) by a sample during heating, cooling or at constant
temperature [71]. This technique provides information on melting point, heat
capacity and heat of fusion of examined material. The identification of different
polymorphs is often possible on the basis of differences of their melting points [106].
Phase transitions and stability relations between different polymorphic forms can
also be investigated using this technique [107, 120]. It is possible to analyse the
relative stability of different solvates by estimating the strength of the host-solvent
interaction using the enthalpy of desolvatation (HDSC) obtained from a DSC
thermogram. This can be compared with the enthalpy of vaporisation (Hvap) of the
pure solvent [121-123]. Because of the low sensitivity this method cannot detect
polymorphic impurities (<5%). In rare cases this method may not be sensitive to
polymorphic systems at all. For instance only one form of mannitol can be
distinguished by DSC [37]. The analysis of pseudo-polymorphic compounds may be
affected by the type of pan used in the experiment. Also the method is not suitable
for substances which decompose before melting [37].

Thermogravimetric analysis (TGA) and Differential scanning calorimetry


(DSC) were performed on a STA625 thermal analyzer from Rheometric Scientific.
The samples were scanned at a rate of 10C/min from 25 to 400 C under a nitrogen
purge at 50ml/min in open aluminium crucibles. The system was calibrated using an
indium standard. The enthalpy of vaporisation values were taken from Bunger
Riddick and Sakano [124].

Microscopy
Optical microscopy
Optical microscopy is often a primary choice in screening crystal morphology
or monitoring crystal growth or phase transformations of polymorphic systems [12].
Polymorphs differ in their crystal shape and somethimes colour and this can be
observed using optical or scanning electron microscopy. Visual differences in the
crystal morphology do not reflect polymorphism itself. Because there is no intrinsic
relationship between crystal morphology and crystal structure, microscopy alone is
not enough to study polymorphism. Changes in crystal morphology can be caused by
27

different solvents, impurities, additives, etc. Optical microscopy has been applied to
the study of the growth rates of individual faces of many polymorphic systems such
as sulfathiazole [125] and methylprednisolone [126].

Scanning Electron Microscopy


Scanning Electron Microscope (SEM) is routinely used to generate high
resolution images [127]. It can detect and analyse surface fractures, examine surface
contamination, crystal morphology, and the presence and location of crystal defects
[128]. When additionally equipped with an Energy Dispersive X-ray system (EDX)
it provides rapid determination of elemental composition. SEM work will usually
require the sample to be kept in a vacuum. This can be a limiting factor especially
when dealing with solvated crystals or compounds which are vulnerable to
sublimation at room temperature. SEM is widely used in many areas including:
metallurgy, life science, biology, gemology and medical and forensic science. It has
also been applied to the determination of crystal growth mechanisms [129, 130],
topographical control of crystal nucleation [131] and the investigation of the stability
of crystalline drugs[132, 133].

The Olympus SZX16 stereozoom microscope and a Hitachi S-4700 SEM


coupled with EDX were used to perform surface analysis of organic compounds in
this study.

ATR-Infrared spectroscopy
Infrared (IR) spectroscopy provides valuable information on structure and
molecular conformation in the solid state [134, 135]. Significantly changes arising
from intermolecular interactions such as H-bonding affect the observed spectrum.
This is particularly important when studying polymorphism [136]. Sometimes
however IR spectra of polymorphic systems do not differ significantly and this
indicates that the fingerprints of vibrational modes are not greatly affected by the
differences in the crystal structures. In general IR spectroscopic techniques are
robust, inexpensive, require only small quantities of a compound and very little
sample preparation [135]. Therefore they are highly suitable for preliminary
examination, identification and characterisation of pharmaceutical products. As the
28

older dispersive equipment has now been replaced by the more accurate Fourier
transform (FT) spectrometers IR has been successfully employed in the quantitative
analysis of polymorphic systems [137, 138].
Attenuated total reflectance (ATR) is a widely used and particularly
convenient sampling technique which allows for qualitative and quantitative analysis
of solid state pharmaceutical compounds with almost no sample preparation [1].
ATR-IR spectra were collected from 4000-650 cm-1 on a PerkinElmer FTIR/FT_FIR Spectrum 400 using 32 accumulations at a resolution of 4cm-1 using
Spectrum v6.3.2 software. The ATR was a DATR 1 bounce diamond/ZeSe universal
ATR sampling accessory.

29

Chapter 3:
Crystallization of Solvent Free Crystals not
Available from Solution: Study Case
Stanozolol

30

Introduction
Crystalline forms of stanozolol
Stanozolol is an anabolic steroid that was developed by Winthrop
Laboratories in 1962 [139]. It proved to be successful in treating anaemia,
osteoporosis and hereditary angioedema and it is also popularly used as a female
body builder [140-142]. It is commonly sold under the names Winstrol, Tenabol and
Winstrol Depot [143].
Stanozolol was described in the early literature as having three polymorphic
forms and several solvated forms. In 1993 W. L Rocco characterised polymorphs 1
and 2 and four solvates (monohydrate, methanol, ethanol and isopropanol) using
differential scanning calorimetry (DSC), X-ray powder diffraction (PXRD) and
infrared spectroscopy (FT-IR) [144]. PXRD studies revealed the diversity in crystal
structures among the crystalline forms of stanozolol and its pseudo-polymorphs. In
2003 the first and only crystal structure (before this work) of stanozolol in its ethanol
solvate was published by D. R. Lisgarten [145]. No crystal structures of pure
stanozolol polymorphs had been reported before this work.
Sublimation method A was applied to grow solvent free crystals of
stanozolol. Solution crystallization gave crystals of four already known and seven
new solvated forms. Thus the crystal structures of two polymorphs and ten solvates
were determined. Structural diversities among crystalline forms of stanozolol were
further investigated comparing experimental and calculated PXRD patterns using the
Patmatch program within the Oscail package. Thermal analysis was applied to
establish stoichiometry ratios of solvates and to investigate the strength of solventstanozolol interactions. This work provides an understanding of why no solvent free
crystal forms of stanozolol are available from solution in contrast to the ease with
which solvated forms may be crystallized.

31

Experimental Section
Crystallization of stanozolol
Despite the wide range of organic solvents used, only crystals of solvated
forms were obtained. High quality single crystals of polymorphs 1 and 2 were grown
by sublimation, method A, described in the Chapter 2. The amount of sample used in
the experiments varied from 10 to 100 mg. The temperature range used for
stanozolol sublimation was from 135 to 170 C. Both polymorphs were observed at
150 C. However, at the lower end of the temperature range block shaped crystals
dominate whereas at 170 C only needles were produced. This temperature range
was chosen as DSC measurements indicated that there were no transformations in
this region, Fig. 3.1.

Fig. 3.1 DSC-TG curves for stanozolol, showing the solid-solid polymorphic
transformation of form 2 form 1 at 235 C and melting of form 1 at 242 C
followed by decomposition at 353 C.

32

Typical crystals are shown in Fig. 3.2. Crystals of pure polymorphs were used
as seeds but only transformation to one of already known solvated form was
observed.

Fig.3.2 Crystal habit of stanozolol polymorph 1 (left) and 2 (right).

Crystallization of solvated forms of stanozolol


The solvents listed in Table 3.1, were used in crystallization experiments but
all attempts led to crystalline solvates. Crystals of eleven solvates were grown and
pictures of all of these are shown in Fig. 3.3.

Table 3.1 Overview of the solvents used in crystallization experiment.


Overview of the solvents used
acetic acid B

diethyl ether C

propanol A

acetone C

DMF B

propan-2-ol B

acetonitrile C

1,4 - dioxane A

pyridine B

benzene B

ethanol B

THF C

butanol C

ethyl acetate A

toluene C

butan-2-ol B

formamide B

wet ethanol B

chloroform C

methanol B

wet isopropanol B

cyclohexan C

pentanol C

xylene A

Formation of monohydrate form, B solvate formation, C crystals were not observed

Solvated crystals containing methanol, ethanol, isopropanol, 2-butanol, acetic


acid and formamide were obtained by cooling hot saturated solutions. Crystals of the
ethanol dihydrate, the isopropanol dihydrate, the dimethylformamide hydrate and the
pyridine solvate were prepared by slow evaporation from wet solvent solutions. The
33

monohydrate was obtained from wet solvents which do not give solvates by slow
evaporation. These solvents were: propanol, 1,4-dioxane, ethyl acetate and xylene.

a) monohydrate

b) methanol solvate

c) ethanol solvate

d) isopropanol solvate

e) butan-2-ol solvate

f) ethanol dihydrate solvate


34

g) isopropanol dihydrate solvate

h) acetic acid solvate

i) formamide solvate

j) pyridine solvate

k) dimethylformamide hydrate solvate


Fig. 3.3 Crystal habit of stanozolol solvates.

35

Results
Structural analysis of polymorphism in stanozolol
Both needle and block shaped crystals were suitable for single crystal X-ray
analysis. Crystallographic results for both polymorphs are given in Table 3.2.

Table 3.2 Crystal data for polymorphs of stanozolol.


Crystalline form of

Polymorph 1

Polymorph 2

Empirical formula

C21 H32 N2 O1

C21 H32 N2 O1

Formula weight

328.49

328.49

Temperature / K

298(2)

298(2)

Wavelength /

0.7107

0.7107

Crystal system

Orthorhombic

Orthorhombic

Space group

P212121

P21212

a/

7.3164(4)

19.4540(7)

b/

21.562(2)

18.7009(8)

c/

24.0058(11)

10.8348(4)

V / 3

3787.1(5)

3941.8(3)

/ Mg/m-3 (calculated)

1.152

1.107

/ mm-1

0.070

0.068

Reflections collected

11756

12685

Independent reflections

6695

6908

[Rint = 0.0278]

[Rint = 0.0185]

Reflections observed (>2)

3213

5298

Goodness-of-fit on F2

0.756

1.026

Final R indices [I>2(I)]

R1 = 0.0380

R1 = 0.0487

wR2 = 0.0616

wR2 = 0.1023

R1 = 0.1056

R1 = 0.0718

wR2 = 0.0703

wR2 = 0.1138

stanozolol

R indices (all data)

36

calculated XPRD
of polymorph 1

observed XPRD
of polymorph 1
(needles)
5

10

15

20

25

30

35

40

2
Fig. 3.4 Observed and calculated PXRD patterns of polymorph 1.

calculated XPRD
of polymorph 2

observed XPRD
of polymorph 2
(blocks)
5

10

15

20

25

30

35

40

2
Fig. 3.5 Observed and calculated PXRD patterns of polymorphs 2.

37

The needles and blocks were identified as polymorphs 1 and 2 respectively


by comparing their PXRD patterns with those reported in the literature [144]. The
calculated PXRD patterns for the needles and the blocks are also in good agreement
with both the reported and observed patterns, Fig. 3.4-5.
Polymorph 1 crystallised in the orthorhombic space group P212121 with two
molecules per asymmetric unit. The molecules within the asymmetric unit are
tautomers A and B, Fig. 3.6. The tautomers were identified on the basis of the C-C
and C-N bond lengths in the heterocyclic ring and by the way in which the hydrogen
atoms of the N-H and O-H bonds fitted into the hydrogen bonded network. Thus the
C-C ring junction bonds were C2-C18, 1.381(6) and C23-C39, 1.352(6)
respectively and H1N1 and O1H1 were close to the intermolecular contact lines
joining the N1O1 and O1N4 respectively.

20
7
6
19
1

3
2

1 E
2

A
18

B
16

13

41

21

28
10

10
22

12
4

1
9

23

14

E
3

17
15
tautomer A

29
C
33

A
39

26

24

11
4

27

25

37
38
36
tautomer B

42

30

34

31

32

35

Fig. 3.6 Tautomers of polymorph 1 showing the numbering scheme for the non
hydrogen atoms.

There are two potential hydrogen bond donors and three potential hydrogen
bond acceptors in each of the tautomers. Hydrogen bonded chains form a spiral motif
in the a direction. The motif involves (N1-HO1-HN4-N3-HN2-)n, Table 3.3.
This is illustrated in Fig. 3.7 and 3.8 and in graph set notation this is described as
C33(8) chains [146]. The double ended nature of tautomer As hydrogen bonding
links the spiral motifs into a 3D network.

38

Fig. 3.7 View of hydrogen bonded spiral down a showing the C33(8) graph set of
polymorph 1.

Fig. 3.8 Spirals of polymorph 1 linked by tautomer A molecules.

39

Table 3.3 Hydrogen bonding interactions in the crystal structures of polymorph 1


and polymorph 2.
Orientation
Form of

of

stanozolol

stanozolol

Tautomer

head - tail

A and B

polymorph
1

head - head

DA

Dimensionality

H-bond

[]

of network

N1H1N1O1

2.817

2D

N4H1N4N2

2.978

O1H1O1N3

2.808

O1H1O1N3

2.833

polymorph

tail - tail

O2H1O2O1

2.743

head - tail

N2H1N2O2

2.778

N4H1N4N1

2.885

3D

However, the O-H group of tautomer B, O2, is not involved in hydrogen bonding.
This agrees with the reported analysis of IR spectra where a high frequency nonhydrogen bonded O-H band was observed at 3619 cm-1, Fig. 3.9. Unused hydrogen
bonding capacity is not common as it breaks the first rule of Etters analysis of
hydrogen bonding which states that All good proton donors and acceptors are used
in hydrogen bonding [146]. There are, however, several well established exceptions
to this rule. Alloxan for example has no hydrogen bonds in its crystal structure and
an analysis using crystal structure prediction methods of possible interactions
between alloxan molecules and those of related systems shows that some dipoledipole interactions, for example (C=O)(C=O), can compete with conventional
hydrogen bonding [147]. Since there are no dipoles in the stanozolol molecule other
than hydrogen bond donors and acceptors it is more likely that it belongs to the class
of rigid awkward shaped molecules which have packing difficulties of which
desloratadine is an example [148].

40

Fig. 3.9 FT-IR spectra of Stanozolol polymorph 1 (red) and 2 (green) showing high

3600

3200

2800

2400

2000

1800
cm-1

1600

1400

1200

1000

800

650.0

frequency non-hydrogen bonded O-H band at 3619 cm-1.

%T

4000.0

3619 cm-1

41

Polymorph 2 crystallized in space group P21212 with two molecules of


tautomer B per asymmetric unit. All potential H-bond donors and acceptors are
involved in the formation of a 3D H-bonding network which consists of two
identical, independent, interpenetrating 3D networks, Fig. 3.10.

Fig. 3.10 Colour coded two identical, independent 3D hydrogen bonded networks of
polymorph 2 down a.

Fig. 3.11 H-bonded ring of polymorph 2 down c displaying the R44(10) graph set.
42

All nitrogen atoms of two molecules and oxygen atoms of another two
molecules are involved in the formation of a ring motif, Fig. 3.11. This ring pattern,
R44(10), involves (O1-HN3-N4-HN1-N2-HO2-H).
A void search, which was performed with the PC void program within the
Oscail package [149], shows that both structures contain voids. One sphere of radius
1.6 can be fitted into the polymorph 1 structure and two spheres of 1.85 radius
can be fitted into polymorph 2. The void in polymorph 1 is adjacent to O2 which is
not involved in hydrogen bonding, Fig. 3.12, and the voids in polymorph 2 are at the
origin at 0.5, 0, 0, and 0.75 0, 0. The structure adopted by polymorph 1 is a
compromise between the loss of some hydrogen bonding and the generation of a
more dense structure. The calculated densities of polymorphs 1 and 2 are 1.152 and
1.107 mg/m3 respectively. The presence of voids in these structures is probably due
to the molecules packing difficulties. These packing problems may also explain why
it has not proved possible to obtain solvent free crystals from solution. The
observation of the less dense less stable polymorph is formed at lower temperature
and its conversion to the more stable form at higher temperature is in agreement with
Ostwalds rule of stages [54].

Fig. 3.12 Arrangement of voids in polymorph 1.


43

Structural diversity of stanozolol solvates


Crystals of eleven solvates were grown and the crystal structures of ten of
them were determined. The crystallographic data is given in Tables 3.4-8.

Table 3.4 Crystal data for monohydrate and ethanol solvate.

Crystalline form of

monohydrate

ethanol solvate

Empirical formula

C21 H34 N2 O2

C23 H38 N2 O2

Formula weight

346.50

374.55

Temperature / K

298(2)

150(2)

Wavelength /

0.7107

0.7107

Crystal system

Orthorhombic

Orthorhombic

Space group

P212121

P212121

a/

7.2098(5)

7.1392(5)

b/

10.4654(7)

10.9541(8)

c/

26.0313(13)

26.8891(16)

V / 3

1964.2(2)

2102.8(3)

/ Mg/m-3 (calculated)

1.172

1.183

/ mm-1

0.075

0.075

Reflections collected

10407

6211

Independent reflections

3552

3627

[Rint = 0.0345]

[Rint = 0.0460]

Reflections observed (>2)

2182

2219

Goodness-of-fit on F2

0.801

0.892

Final R indices [I>2(I)]

R1 = 0.0372

R1 = 0.0550

wR2 = 0.0631

wR2 = 0.0705

R1 = 0.0720

R1 = 0.0993

wR2 = 0.0676

wR2 = 0.0894

stanozolol

R indices (all data)

44

Table 3.5 Crystal data for isopropanol and butan-2-ol solvate.

Crystalline form of
isopropanol solvate

butan-2-ol solvate

Empirical formula

C24 H40 N2 O2

C25 H42 N2 O2

Formula weight

388.58

402.61

Temperature / K

150(2)

298(2)

Wavelength /

0.7107

0.7107

Crystal system

Monoclinic

Monoclinic

Space group

C2

C2

a/

24.5445(13)

25.321(2)

b/

7.2894(3)

7.421(2)

c/

15.2500(8)

15.393(2)

122.679(7)

123.40

V / 3

2296.56(19)

2414.6(7)

/ Mg/m-3 (calculated)

1.124

1.107

/ mm-1

0.071

0.069

Reflections collected

5444

17882

Independent reflections

3446

4402

[Rint = 0.0161]

[Rint = 0.0472]

Reflections observed (>2)

3029

3388

Goodness-of-fit on F2

0.980

1.039

Final R indices [I>2(I)]

R1 = 0.0318

R1 = 0.0503

wR2 = 0.0725

wR2 = 0.1290

R1 = 0.0375

R1 = 0.0691

wR2 = 0.0739

wR2 = 0.1418

stanozolol

R indices (all data)

45

Table 3.6 Crystal data for ethanol dihydrate and isopropanol dihydrate solvate.

Crystalline form of

ethanol

isopropanol

stanozolol

dihydrate solvate

dihydrate solvate

Empirical formula

C44 H74 N4 O5

C24 H44 N2 O4

Formula weight

739.07

424.61

Temperature / K

150(2)

150(2)

Wavelength /

0.7107

0.7107

Crystal system

Monoclinic

Monoclinic

Space group

P21

P21

a/

7.3934(2)

10.5093(3)

b/

27.5812(6)

7.2906(2)

c/

10.5964(3)

15.5622(5)

109.234(3)

94.812(3)

V / 3

2040.19(9)

1188.16(6)

/ Mg/m-3 (calculated)

1.203

1.187

/ mm-1

0.078

0.080

Reflections collected

9236

5499

Independent reflections

5277

3650

[Rint = 0.0197]

[Rint = 0.0169]

Reflections observed (>2)

4629

3157

Goodness-of-fit on F2

0.980

0.973

Final R indices [I>2(I)]

R1 = 0.0327

R1 = 0.0332

wR2 = 0.0701

wR2 = 0.0733

R1 = 0.0379

R1 = 0.0397

wR2 = 0.0711

wR2 = 0.0747

R indices (all data)

46

Table 3.7 Crystal data for acetic acid and formamide solvate.

Crystalline form of
acetic acid solvate

formamide solvate

Empirical formula

C25 H40 N2 O5

C43 H64 N5 O3

Formula weight

448.59

698.99

Temperature / K

298(2)

293(2)

Wavelength /

0.7107

0.7107

Crystal system

Monoclinic

Orthorhombic

Space group

P21

P212121

a/

10.3775(8)

7.5672(3)

b/

7.4347(6)

19.6475(9)

c/

15.5801(8)

26.3375(9)

91.895(6)

V / 3

1201.40(14)

3915.8(3)

/ Mg/m-3 (calculated)

1.240

1.186

/ mm-1

0.086

0.075

Reflections collected

5253

14471

Independent reflections

3275

6840

[Rint = 0.0395]

[Rint = 0.0264]

Reflections observed (>2)

1872

4211

Goodness-of-fit on F2

0.875

0.909

Final R indices [I>2(I)]

R1 = 0.0504

R1 = 0.0476

wR2 = 0.0824

wR2 = 0.1086

R1 = 0.0921

R1 = 0.0852

wR2 = 0.0900

wR2 = 0.1176

stanozolol

R indices (all data)

47

Table 3.8 Crystal data for pyridine and dimethylformamide hydrate solvate.

Crystalline form of
pyridine solvate

DMF hydrate solvate

Empirical formula

C47 H69 N5 O2

C45 H73 N5 O4

Formula weight

736.07

748.08

Temperature / K

298(2)

298(2)

Wavelength /

0.7107

0.7107

Crystal system

Orthorhombic

Monoclinic

Space group

P212121

P21

a/

7.233(2)

10.4243(10)

b/

11.850(2)

7.4432(5)

c/

48.672(2)

27.018(2)

stanozolol

94.069(9)

V / 3

4171.8(14)

2091.1(3)

/ Mg/m-3 (calculated)

1.172

1.188

/ mm-1

0.072

0.076

Reflections collected

12520

9056

Independent reflections

6556

5784

[Rint = 0.0251]

[Rint = 0.0169]

Reflections observed (>2)

4847

4640

Goodness-of-fit on F2

1.085

1.025

Final R indices [I>2(I)]

R1 = 0.0679

R1 = 0.0493

wR2 = 0.1132

wR2 = 0.1208

R1 = 0.0962

R1 = 0.0668

wR2 = 0.1223

wR2 = 0.1327

R indices (all data)

48

DMF hydrate

Formamide
Pyridine

Acetic acid
Isopropanol
dihydrate
Ethanol
dihydrate
Butan-2-ol
Isopropanol

Ethanol
Monohydrate
5

10

15

20

25

2
Fig. 3.13 Calculated PXRD patterns for ten pseudo-polymorphs of stanozolol.
49

The crystals of the methanol solvate which appeared to be of good optical


quality were not suitable for single crystal X-ray diffraction as less than 2% of the
reflections could be indexed. A possible explanation for the failure of the methanol
solvate to form crystals with long range order is that methanol is trying to crystallize
with a structure similar to polymorph 1 with the solvent molecules in the voids.
However, the void volume which is about the size of a water molecule is just too
small to properly accommodate a methanol molecule.
Visual inspection of Fig. 3.13 suggests that the isopropanol and butan-2-ol
solvates are isomorphous. There are several different powder pattern matching
methods available and most of them are in commercial software packages. The
generalized expression for the similarity of powder diffraction patterns shows that
the criteria described in literature all refer to the correlation function and are point by
point comparisons [150]. The Xmatch program was developed to include point
neighbourhoods and was claimed to be an improvement on traditional methods
[150]. Xmatch does not pick out this isomorphous pair of solvates. The PatMatch
program within the Oscail package was successfully used to analyse calculated
PXRD patterns of the crystalline forms of stanozolol, Fig. 3.13. A brief description
of the PatMatch method is given above in Chapter 2. A twelve peak comparison was
used and the selected peaks are given in Table 3.10. Table 3.9 contains a list of
identification numbers assigned to the analysed crystalline forms of stanozolol. The
PatMatch results are presented in Tables 3.11 and 3.12. Table 3.11 is the matrix of
the numbers of matching peaks and the diagonals which correspond to identities
show the expected 12 in Table 3.11 while the expected 1.0 along the diagonal of
Table 3.12 is set to 0 to make it easier to visualize the results using bar charts etc.
The program also lists the top matches and these are shown in Table 3.13 and clearly
only two solvates are isomorphous, Fig. 3.14-15.

50

Table 3.9 List of crystalline forms of stanozolol and their corresponding


identification numbers.
Identification
number

Crystalline form of stanozolol

Polymorph 1

Polymorph 2

Stanozolol ethanol dihydrate solvate

Stanozolol acetic acid solvate

Stanozolol butan-2-ol solvate

Stanozolol DMF hydrate solvate

Stanozolol ethanol solvate

Stanozolol formamide solvate

Stanozolol monohydrate

10

Stanozolol isopropanol dihydrate solvate

11

Stanozolol isopropanol solvate

12

Stanozolol pyridine solvate

Table 3.10 Position of the peaks with highest intensities chosen for PXRD analysis.
Identification
Position of the peaks [2]
number
1

6
7

12.75, 13.25, 14.15, 16.35, 16.55, 16.85,


18.35, 20.75, 33.25, 35.55, 38.25, 38.50;
12.20, 12.45, 13.10, 14.40, 15.45, 16.60,
17.00, 18.50, 20.50, 24.55, 26.75, 36.25;
12.80, 17.95, 18.80, 25.80, 26.25, 26.85,
29.70, 31.85, 33.30, 34.25, 36.00, 38.10;
14.60, 15.60, 17.80, 20.20, 20.85, 23.50,
24.10, 25.40, 26.15, 26.55, 30.35, 39.25;
12.60, 13.20, 14.65, 15.85, 17.30, 20.35,
21.00, 22.10, 23.10, 27.70, 28.25, 37.30;
14.60, 15.75, 17.00, 17.55, 17.80, 20.30,
21.25, 22.50, 25.65, 28.70, 34.85, 38.60;
13.95, 15.05, 15.95, 20.50, 21.25, 22.50,

51

24.25, 24.70, 27.10, 27.90, 34.80, 35.85;


14.75, 17.85, 18.00, 18.20, 19.10, 22.40,

22.85, 27.20, 27.40, 29.75, 38.40, 38.65;


14.00, 14.90, 15.25, 16.90, 17.25, 21.20,

22.00, 27.00, 28.25, 29.20, 34.40, 37.15;


14.75, 15.55, 16.90, 18.30, 22.00, 23.75,

10

25.45, 28.00, 28.30, 29.30, 36.45, 39.85;


12.85, 13.45, 15.10, 16.25, 17.65, 20.50,

11

21.65, 22.75, 23.65, 28.45, 29.15, 38.40;


14.40, 14.75, 15.35, 15.90, 16.05, 16.95,

12

17.50, 18.50, 20.65, 21.40, 22.25, 31.65;

Table 3.11 Number of peaks matched.


1

10

11

12

12

12

12

0 12

0 12

10

3 12

12

12

12

10

12

11

12

12

12

Ten out of twelve matching peaks were found for the isopropanol and butan2-ol solvates. For these peaks a match indices of 0.88 was calculated. The
isomorphous pair, isopropanol and butan-2-ol solvates, are both monoclinic (space
group C2) with one molecule per asymmetric unit. Although there is a significant
difference in their unit cell dimensions, for example the a dimensions differ by 0.776
, the observed and calculated PXRD patterns are very similar, Fig. 3.14-15. It is
interesting that there are considerable differences in observed and calculated
52

intensities. This is due to preferred orientation effects as both observed patterns are
dominated by their 4 0 2 reflections. Thus these solvates are isomorphus and also
have similar crystal morphologies.

Table 3.12 Pattern match indices.


4
5
6
7
8
9

10

11

12

1 0.00 0.00 0.00 0.00 0.16 0.00 0.00 0.00 0.00 0.00 0.38 0.00
2 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00
3 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00
4 0.00 0.00 0.00 0.00 0.00 0.34 0.00 0.00 0.00 0.00 0.00 0.00
5 0.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.88 0.00
6 0.00 0.00 0.00 0.34 0.00 0.00 0.00 0.00 0.00 0.46 0.06 0.00
7 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00
8 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00
9 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00
10 0.00 0.00 0.00 0.00 0.00 0.46 0.00 0.00 0.00 0.00 0.00 0.00
11 0.38 0.00 0.00 0.00 0.88 0.06 0.00 0.00 0.00 0.00 0.00 0.00
12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00

Table 3.13 Top matches for the pairs of PXRD patterns of crystalline forms of
stanozolol.
Match Indices
Identification numbers of pairs of forms of stanozolol
0.88

5 and 11 Stanozolol butan-2-ol and isopropanol solvates

0.46

6 and 10 Stanozolol DMF hydrate and isopropanol


dihydrate solvates

0.38

1 and 11 Polymorph 1 and stanozolol isopropanol solvate

0.34

4 and 6 Stanozolol DMF hydrate and acetic acid solvates

0.16

1 and 5 Polymorph 1 and stanozolol butan-2-ol solvate

0.06

6 and 11 Stanozolol DMF hydrate and isopropanol solvates

53

calculated XPRD
butan-2-ol

calculated XPRD
isopropanol
5

10

15

20

25

30

35

40

2
Fig. 3.14 Calculated PXRD patterns of the isopropanol and butan-2-ol solvates.
.

observed XPRD
butan-2-ol

observed XPRD
isopropanol
5

10

15

20

25

30

35

40

2
Fig. 3.15 Observed PXRD patterns of the isopropanol and butan-2-ol solvates.

54

Molecular packing and hydrogen bonding of stanozolol solvates


Although stanozolol has the facility of co-crystallizing with many solvents
forming distinctly different structures some similarities in H-bonding patterns were
recognised. Stanozolol can form H-bonds with the solvent molecules through the
hydroxyl group located on one end of the molecule and both of the nitrogen atoms in
the pyrazole ring at the other end of the molecule. The solvent molecules act as Hbond donors and or acceptors and can form two and three dimensional H-bonded
networks. There is no unused H-bonding capacity in any of the solvated forms. The
list of all H-bonds in the crystal structures of the stanozolol solvates is in Table 3.14.

Table 3.14 H-bonding interactions in the crystal structures of stanozolol solvates.


Crystalline

Orientation

form of

of

stanozolol

stanozolol

ethanol

head - tail

Tautomer

H-bond

DA

Dimensionality

[]

of network

O1H1O1O2 2.790

2D

O2H1O2N2 2.808

solvate

N1H1N1O1 2.833
isopropanol

head - tail

N1H1N1O1 2.785

2D

O1H1O1O2 2.747

solvate

O2H1O2N2 2.857
butan-2-ol

head - tail

N1H1N1O1 2.816

2D

O1H1O1O2 2.774

solvate

O2H1O2N2 2.916
ethanol

head - head

dihydrate

tail - tail

solvate

A and B

O1H1O1O3 2.820

2D

O2H1O2O5 2.720
O3H1O3N2 2.759
O4H1O4O2 2.764
O4H2O4O3 2.911
O5H1O5O1 2.773
O5H2O5N3 3.086
N1H1N1N3 2.937
N4H1N4O4 2.747
55

isopropanol

head - tail

O1H1O1O2 2.722

dihydrate

O2H2O2O4 2.783

solvate

O3H1O3O1 2.798

2D

O3H2O3N2 2.873
O4H1O4O3 2.831
O4H2O4O3 2.848
N1H1N1O4 2.855
monohydrate

head - tail

O1H1O1O2 2.725

3D

O2H1O2N1 2.899
O2H2O2O1 2.916
N2H1N2O1 2.897
acetic acid

head - head

solvate

tail - tail

O1H1O1O2 2.608

2D

O3H1O3O1 2.795
O5H1O5N2 2.719
N1H1N1O4 2.876

formamide

head - head

solvate

tail - tail

A and B

O1H1O1O2 2.745

2D

O2H1O2O3 2.746
N1H1N1N3 3.063
N4H1N4N2 3.099

pyridine

head - tail

O1H1O1O2 2.830

3D

O2H1O2N2 2.865

solvate

N1H1N1N5 2.952
N3H1N3O1 2.830
DMF

head - head

hydrate

tail - tail

A and B

solvate

O1H1O1O3 2.744

2D

O2H1O2O1 2.831
O4H1O4N2 2.834
N1H1N1N3 2.954
N4H4O4

2.764

2D Hydrogen bonded layer structures


Isopropanol and butan-2-ol solvates, have stanozolol molecules hydrogen
bonded head to tail forming chains via N1H1N1O1 hydrogen bonds. Solvent
molecules link these chains into 2D sheets via the solvent oxygen O2 and
O1H1O1O2 and O2H1O2N2 hydrogen bonds. The hydrogen bonding chain
56

within the sheets can be classified as C33(7), Fig. 3.16-17. These 2D sheets are not
hydrogen bonded to each other. The ethanol solvate has a similar hydrogen bond
network but alternate molecules are rotated preventing the adoption of a sheet
structure, Fig. 3.18.

Fig. 3.16 The view of hydrogen bonding pattern in a direction of isopropanol


solvate.

Fig. 3.17 The view of hydrogen bonding pattern in a direction of butan-2-ol solvate.

57

Fig. 3.18 The view of hydrogen bonding pattern in a direction of ethanol solvate.

Solvates from wet ethanol, acetic acid, formamide and wet DMF, have layer
structures in which stanozolol molecules are oriented head to head and tail to tail,
Fig. 3.19-21. There are no H-bonds between stanozolol molecules in the structure of
the acetic acid solvate. Stanozolol is orientated in the headtohead, tailtotail
fashion with H-bonded acetic acid molecules in between.

Fig. 3.19 Layered nature of ethanol dihydrate solvate.

58

Fig. 3.20 Layered nature of acetic acid solvate.

Fig. 3.20 Layered nature of formamide solvate.

Fig. 3.21 Layered nature of DMF hydrate solvate.

The isopropanol dihydrate solvate has a double layer sheet structure with no
hydrogen bonding between the double layers, Fig. 3.22. These double layers are
connected by the water molecules via the O3O4 H-bond (2.848 ). Stanozolol
59

molecules are not H-bonded with each other. They are linked to the isopropanol and
two water molecules via O1H1O1O2 (2.722 ), N1H1N1O4 (2.855 ) and
O3H2O3N2 (2.873 ) respectively.

Fig. 3.22 Double layers of isopropanol dihydrate solvate.

3D Hydrogen bonded networks


The monohydrate and the pyridine solvate have 3D hydrogen bonded
networks. The structure of the monohydrated form consists of 2D sheets parallel to
the ac face, Fig. 3.23. These layers are connected via the water molecules into a 3D
arrangement. Fig. 3.24 shows a view down the a axis of the interconnected layers.
The structure of the pyridine solvate is unlike the other solvates where a layered
arrangement of the molecules can be observed. The pyridine molecule is H-bonded
to stanozolol via N1H1N1N5 (2.722 ). It is not involved in the propagation of
hydrogen bonds but it does force the stanozolol molecules to pack into a 3D network
in which there is no unused hydrogen bonding capacity, Fig. 3.25.

60

Fig. 3.23 View of interconnected layers of monohydrate solvate.

Fig. 3.24 View of 2D sheets and of monohydrate solvate.

61

Fig. 3.25 3D hydrogen bonding network of pyridine solvate.

62

Tautomerism in stanozolol solvates


The stanozolol tautomers A and B are observed both alone and together in the
crystal structures of polymorphs and solvates, Table 3.14. DFT gas phase
calculations performed using Gaussian 09 [151] show that the energies of both
tautomers are very close with tautomer A just 1.2 kJ/mol lower than tautomer B. A
value of 81kJ/mol was calculated for the lattice energy of polymorph 1 using the
Habit program within the Oscail package [109]. Thus differences in packing energies
can easily overcome the small energy difference between the tautomers. Both
tautomers were found in the crystal structures of the ethanol dihydrate, formamide
and the DMF hydrate solvates. The monohydrate has only tautomer B present. The
ethanol solvate has one stanozolol molecule per asymmetric unit but it appears that
the structure is disordered with both tautomers present in nearly equal amounts as the
bond lengths in the heterocyclic ring have values which are the mean of the
tautomers observed in the other structures. The rest of the solvates contain only
tautomer A.

(a)

63

(b)

(c)
Fig 3.26 Tautomers of (a) ethanol dihydrate (view down c), (b) formamide (view
down b) and (c) DMF hydrate (view down a) solvates.

64

Thermal analysis of stanozolol solvates: strength of intermolecular


interaction
Thermal analysis was used to check the stanozolol to solvent stoichiometric
ratio in bulk samples and to investigate the strength of solvent stanozolol
interactions. The TGA and DSC results for the monohydrate, methanol, ethanol and
isopropanol solvates were also in good agreement with the data found in the
literature [144]. Due to the complex nature of the ethanol dihydrate and the DMF
hydrate, total weight loss was calculated for all solvent molecules present.

Fig 3.27 DSC-TG curves for monohydrate, showing the weight loss of water
molecule, solid-solid polymorphic transformation of form 2 form 1 at 228 C,
melting of polymorph 1 at 242 C and decomposition.

65

Fig 3.28 DSC-TG curves for methanol solvate showing the solvent weight loss at
158 C, polymorphic transformation of form 3 form 2 form 1 at 208 C and
228 C respectively, followed by the melting peak of polymorph 1 at 245 C and
decomposition.

66

Fig 3.29 DSC-TG curves for ethanol solvate showing the solvent weight loss at 123
C, before the melting at 241 C and decomposition.

Fig 3.30 DSC-TG curves for isopropanol solvate showing the solvent weight loss at
128 C, before the melting at 242 C and decomposition.
67

Fig 3.31 DSC-TG curves for butan-2-ol solvate showing the solvent weight loss,
melting at 241 C and decomposition.

Fig 3.32 DSC-TG curves for ethanol dihydrate solvate showing the solvent weight
loss, melting at 242 C and decomposition.
68

Fig 3.33 DSC-TG curves for acetic acid solvate showing the solvent weight loss,
melting at 242 C and decomposition.

Fig 3.34 DSC-TG curves for pyridine solvate showing the solvent weight loss at 159
C, followed by the melting peak at 244 C and decomposition.

69

Fig 3.35 DSC-TG curves for dimethylformamide hydrate solvate showing the solvent
weight loss, melting at 242 C and decomposition.

Thermograms for some of the solvates are shown in Fig. 3.27-35 and Table
3.15 gives data for solvent weight loss and enthalpy changes. Solvent loss occurs as a
one step process in most cases but multi step processes are observed for solvates with
more than one solvent molecule in the lattice. There is excellent agreement between
the observed and calculated weight loss on heating.
The endotherms of desolvatation are followed by a sharp endotherm at 244C
which corresponds to the melting of polymorph 1. The extra peaks between 200 and
240 C which are observed for the methanol solvate and the monohydrate have also
been reported for the ethanol solvate and have been attributed the transformation
along polymorphs 3 2 1 [144]. The transformations and melting occur at
211.9C, 231.5C, 245.2C and 211.1C, 229.9C, 244.5C for the methanol solvate
and the monohydrate respectively. In sublimation experiments only forms 1 and 2
have been observed and it has not been possible to produce crystals for form 3.
Thermal analysis can be used to estimate the strength of the host-solvent
interaction by comparing the enthalpy of desolvatation (HDSC) obtained from DSC
thermogram with the enthalpy of vaporisation (Hvap) of the pure solvent. If the
70

solvent is strongly bound then the enthalpy of desolvatation will exceed the enthalpy
of vaporisation [121-123]. HDSC was calculated using the relationship: HDSC =
[(Hexp100)/Mcalc], where is the molecular weight of the solvent and Mcalc is the
theoretical loss of solvent weight.

Table 3.15 DSC-TG analysis of some stanozolol solvates.


Solvated form of

host/guest

Mcalc

Mexpa

Hexp

HDSC

stanozolol

ratio

[%]

[%]

[J/g]

[kJ/mol] [kJ/mol]

monohydrate

(1:1)

5.2

4.9

104.4

36.2

40.7

methanol

(1:1)

8.9

8.8

162.5

33.9

35.3

ethanol

(1:1)

12.3

12.1

195.5

73.2

38.7

isopropanol

(1:1)

15.5

14.7

164.6

63.8

39.9

butan-2-ol

(1:1)

18.4

17.8

157.1

63.3

40.8

acetic acid

(1:2)

26.8

25.2

295.2

66.2

24.4

pyridine

(2:1)

10.7

10.7

31.7

23.4

36.4

ethanol dihydrate

(2:1:2)

11.1

10.9

DMF hydrate

(2:1:1)

12.2

11.4

Hvap

Observed solvent weight obtained from TGA analysis.


For ethanol, butan-2-ol and acetic acid solvates HDSC values are greater than

Hvap. This suggests that in these cases the solvent molecules are tightly bound in the
crystal lattice. The lower value HDSC for the monohydrate is probably not an
indication of weak binding as the relative value of Hvap for water is expected to be
high since in water all atoms are involved in its hydrogen bonding. The data does
indicate weaker binding for methanol and pyridine and this is probably due to the
lack of long range order in the methanol solvate and the presence of just a single
hydrogen bonding interaction involving the pyridine.

71

Discussion
All attempts to crystallize stanozolol from solution gave solvated crystals.
Sublimation proved to be a successful method for the growth of the first high quality
solvent free crystals of stanozolol polymorphs 1 and 2. Their crystal structures
contain voids and in the case of polymorph 1 unused H-bonding capacity. Both
features are the consequence of packing difficulties due to the rigid awkward shape
of the molecule. The ready crystallization of solvates which have structures without
voids and their near maximal use of hydrogen bonding capacity is due to their greater
range of packing options.
DSC coupled with TG provided valuable information on the nature of
analyzed materials. It provides easy identification of the methanol solvate whose
crystal quality was not good enough for single crystal X-ray diffraction analysis.
Programs within the Oscail software provide a rapid analysis of the degree of
similarities between the calculated PXRD patterns. The results showed that only two
solvates of stanozolol are isomorphous. This isomorphous pair also had similar
experimental PXRD patterns and crystal morphologies.

72

Chapter 4:
Crystallization of Solvent Free Crystals not
Available from Solution: Study Case Ethynyl
Estradiol (EE)

73

Introduction
Crystalline forms of ethinylestradiol
Ethinylestradiol (EE) is a synthetic derivative of the natural estrogen
estradiol. It is one of the most widely prescribed medicines and is a component of the
combined oral contraceptive pill. It has also proved to be successful in the treatment
of breast cancer [152].
EE was reported to exist in two polymorphic forms with the following
melting points [153]: 146 C, 183 C. Although the polymorphism and pseudopolymorphism of EE was investigated by several research groups no solvent free
crystals have been reported before this work. Seven solvated crystal structures of EE
have been published and some of them have been analyzed by DSC, TGA, FT-IR
and PXRD. The first structure of the hemihydrate form (CSD refcode: FISWIN) was
reported in 1987 by van Geerestein [154]. In 1989 the hemihydrate was redetermined
and the structures of two new solvates, acetonitrile and methanolate, determined. C.
Guguta studied pseudo-polymorphic properties of EE in 2007 [155]. This resulted in
four new solvated forms (dimethylformamide, dioxin, ethanol and nitromethane) and
a detailed comparison of their crystal structures. In spite of these rather
comprehensive studies no crystals of pure form were obtained.
Sublimation method A was used to grow the first solvent free crystals of EE.
They were used as seeds in an attempt to obtain solvent free crystals from solution
but only crystals of new or known solvates were formed. The crystal structures of
solvent free EE and three new solvates were determined. Thermal analysis was
applied to investigate the polymorphism of EE and desolvatation of solvated crystals.
PXRD patterns were calculated and compared for all crystalline forms of EE and
used to analyze further if the reported structural diversity among the solvated forms
continues. A CSD search for non H-bonded carbonyl and hydroxyl groups was
performed to investigate this phenomenon among steroid compounds.

74

Experimental Section
Crystallization of ethinylestradiol
100 mg of EE was used to obtain high quality single crystals by sublimation
method A suitable for structure determination. Colourless lath type crystals were
observed in the temperature range: 110 to 140 C, Fig. 4.2. This range of temperature
was chosen as no events were observed on this portion of the DSC curve, Fig. 4.1.
Below the lower end of that temperature range sublimation was still observed but no
crystal formation took place and only white powder was obtained.

The FT-IR

spectrum of this white powder was identical to spectra of crystals grown by


sublimation.

Fig. 4.1 DSC-TG curves for EE, showing melting at 183 C and decomposition at
310 C.

75

Fig. 4.2 Ethinylestradiol crystal grown by LTGSV via method A.

Crystallization of solvated forms of ethinylestradiol


Crystals of EE grown by sublimation were used as seeds in an attempt to
obtain solvent free crystals from solution. Despite the use of a wide range of
solvents, Table 4.1, no crystals of a pure form were obtained. Crystallization from
butan-2-ol and propanol gave the already known hemihydrate form. Crystallization
from acetone, DMSO and pentan-2-ol yield crystals of the corresponding new
solvates, Fig. 4.3.

Table 4.1 Overview of the solvents used in crystallization experiment.


Overview of the solvents used
acetic acid

diethyl ether

pentan-2-ol B

acetone B

DMF C

propanol A

acetonitrile C

DMSO B

propan-2-ol

benzene

1,4-dioxane C

Pyridine

butanol

ethanol C

THF

butan-2-ol A

ethyl acetate

Toluene

chloroform

Formamide

Xylene

cyclohexan

methanol

Formation of hemihydrate form, B New solvate formation, C Known

solvate formation

76

a) acetone solvate

b) pentan-2-ol solvate

c) DMSO solvate

Fig. 4.3 Crystals of EE acetone, pentan-2-ol and DMSO solvates.

77

Results
Polymorphism in crystal structures of ethinylestradiol
Suitable crystals of EE were analyzed using single crystal X-ray diffraction.
Table 4.2 contains crystallographic data for pure form of EE.

Table 4.2 Crystal data for pure form of EE.


Crystalline form of EE

Solvent free EE

Empirical formula

C20 H24 O2

Formula weight

296.39

Temperature / K

150.1

Wavelength /

0.7107

Crystal system

Orthorhombic

Space group

P212121

a/

6.8664(3)

b/

20.9003(11)

c/

22.0448(8)

V / 3

3163.6(2)

/ Mg/m-3 (calculated)

1.245

/ mm-1

0.078

Reflections collected

9428

Independent reflections

5434 [Rint = 0.0424]

Reflections observed (>2)

3926

Goodness-of-fit on F2

1.027

Final R indices [I>2(I)]

R1 = 0.0626, wR2 = 0.1001

R indices (all data)

R1 = 0.0991, wR2 = 0.1145

78

EE was found to crystallize in the orthorhombic space group P212121 with two
molecules per asymmetric unit. Fig. 4.4 shows the numbering scheme of non
hydrogen atoms.

C20

O2

C38

C18
C12
C13
C16
C17
O1

C2

C9

C36
C37

C8

C5

C3

C19
C33

C7
C6

C1

C10

C32

C11

C14
C15

C40

O4

C4

O3

C27

C29

C28

C25

C23
C22

C39

C31

C34
C35
C26

C21

C30

C24

Fig. 4.4 Numbering scheme of EE for the non hydrogen atoms.

The hydroxyl groups form 1D hydrogen bonded chains through two


moderately strong interactions O3H1O3O4 (2.755 ) and O4H1O4O2
(2.774 ), Fig. 4.5. Although each of the molecules has two hydroxy groups that can
act as potential hydrogen bond donors and acceptors the O1 hydroxyl does not
participate in hydrogen bonding.

Fig. 4.5 1D hydrogen bonded chain of EE extending in c direction.

79

Table 4.3 H-bonding interactions in the crystal structures of pure form of EE.
DHA

DH []

HA []

DA []

DHA []

O4H1O4O2

0.891

1.912

2.774

162.36

O3H1O3O4

0.901

1.862

2.755

170.65

O2H1O2

3.438

This observation is supported by the presence of a high frequency nonhydrogen bonded O-H band in the IR spectrum at 3607 cm-1, Fig. 4.6. The
intermolecular interactions in the structure of EE are listed in Table 4.3.

80

Fig. 4.6 FT-IR spectra of pure form of EE with high frequency non-hydrogen bonded

%T

4000.0

3607 cm-1

3600

3200

2800

2400

2000

1800
cm-1

1600

1400

1200

1000

800

650.0

O-H band at 3607 cm-1.

81

Structural diversity of ethinylestradiol solvates


It has been shown that EE forms a broad range of different crystal structures
with solvent molecules. The most recent report of EE structures presents a detailed
analysis of crystal packing and H-bonding networks which show a large diversity
among the seven solvated forms of EE. In this study an attempt was again made to
obtain solvent free crystals from solution using the crystals obtained by sublimation
as seeds. However, again only crystals of three new solvates (acetone, DMSO and
pentan-2-ol) were formed. The crystal structures of these new solvates were
determined to see if the diversity of solvate structures continued, Table 4.4-6.

Table 4.4 Crystal data for EE acetone solvate.


Crystalline form of EE

acetone solvate

Empirical formula

C23 H30 O3

Formula weight

354.47

Temperature / K

149.9

Wavelength /

0.7107

Crystal system

Monoclinic

Space group

P21

a/

6.8006(4)

b/

22.1731(9)

c/

7.3916(5)

117.031(7)

V / 3

992.83(9)

2
-3

/ Mg/m (calculated)

1.186

/ mm-1

0.077

Reflections collected

3018

Independent reflections

2106, Rint = 0.0216

Reflections observed (>2)

1978

Goodness-of-fit on F

1.043

Final R indices [I>2(I)]

0.0315, R2 = 0.0735

R indices (all data)

0.0348, R2 = 0.0756
82

Table 4.5 Crystal data for EE DMSO solvate.

Crystalline form of EE

DMSO solvate

Empirical formula

C24 H36 O4 S2

Formula weight

452.65

Temperature / K

150.0

Wavelength /

0.7107

Crystal system

Orthorhombic

Space group

P21212

a/

6.9652 (3)

b/

10.9689 (3)

c/

31.2143 (11)

V / 3

2384.78(15)

/ Mg/m-3 (calculated)

1.261

/ mm-1

0.250

Reflections collected

7212

Independent reflections

4224, Rint = 0.0204

Reflections observed (>2)

3945

Goodness-of-fit on F2

1.119

Final R indices [I>2(I)]

0.432, R2 = 0.924

R indices (all data)

0.0476, R2 = 0.0982

83

Table 4.6 Crystal data for EE pentan-2-ol solvate.

Crystalline form of EE

Pentan-2-ol solvate

Empirical formula

C25 H36 O3

Formula weight

384.54

Temperature / K

149.9

Wavelength /

0.7107

Crystal system

Monoclinic

Space group

P21

a/

12.3596(6)

b/

6.9442(3)

c/

13.9837(8)

111.000(6)

V / 3

1120.47(9)

/ Mg/m-3 (calculated)

1.140

/ mm-1

0.073

Reflections collected

5341

Independent reflections

3508, Rint = 0.0324

Reflections observed (>2)

2899

Goodness-of-fit on F2

1.048

Final R indices [I>2(I)]

0.0578, R2 = 0.1400

R indices (all data)

0.0729, R2 = 0.1516

84

1,4-dioxan

nitromethan

DMSO

DMF

acetonitrile

acetone

penthan-2-ol

ethanol

methanol
hemihydrate
5

10

15

20

25

30

2
Fig. 4.7 Calculated PXRD patterns of ten solvates of EE.

85

The crystal structures of ten known EE solvates were analyzed by comparing


their calculated powder patterns, Fig. 4.7, using the PatMatch program. Identification
numbers assigned to the crystalline forms of EE are listed in Table 4.7. Table 4.8
gives the position of the peaks chosen for the analysis of calculated powder
diffraction patterns.

Table 4.7 List of crystalline forms of EE and their corresponding identification


numbers.
Identification
number

Crystalline form of EE

EE acetonitrile solvate

EE 1,4 - dioxan solvate

EE DMF solvate

EE ethanol solvate

EE hemihydrate

EE methanol solvate

EE nitromethane solvate

EE

EE acetone solvate

10

EE DMSO solvate

11

EE pentan-2-ol solvate

Table 4.8 Position of the peaks with highest intensities chosen for PXRD analysis.
Identification
number
1

Position of the peaks [2]


14.90, 17.10, 17.30, 19.35, 20.65, 21.20,
22.80, 22.95, 24.05, 26.05, 28.85 31.70;

14.80, 15.05, 15.85, 16.75, 17.40, 19.30,


19.55, 19.85, 21.35, 22.05, 23.25, 36.05;

14.80, 15.50, 15.70, 16.45, 25.40, 25.65,


26.00, 26.45, 26.85, 27.55, 28.10, 39.10;

13.70, 14.50, 15.35, 16.65, 18.45, 19.55


20.50, 21.95, 24.35, 25.35, 26.70, 37.00;

86

14.05,16.85, 18.45, 19.75, 22.60, 23.45

25.10, 26.25, 32.70, 37.95, 38.05, 39.40;


14.95, 15.05, 15.85, 17.50, 19.25, 22.00

22.45, 24.00, 24.50, 27.35, 29.00, 30.90;


15.30, 15.40, 16.05, 16.55, 18.00, 20.70

21.85, 22.50, 22.60, 23.00, 24.55, 31.60;


13.30, 14.10, 15.90, 17.40, 18.55, 19.80

21.60, 22.70, 22.80, 24.55, 24.90, 28.95;


14.00, 14.65, 15.10, 15.20, 15.60, 16.70,

24.00, 26.15, 26.45, 27.40, 31.55, 35.05;


15.30, 18.85, 20.70, 22.75, 24.15, 25.05,

10

25.50, 25.70, 26.80, 26.95, 28.80, 36.00


11.90, 13.50, 14.40, 15.15, 18.60, 19.00,

11

20.35, 20.65, 21.95, 22.80, 24.10, 25.50

Table 4.9 Number of peaks matched.


1

10

11

12

12

12

12

12

12

12

12

12

10

12

11

12

87

The number of matching peaks and calculated match indices are illustrated in
Tables 4.9-4.10. The results show that there are no isomorphous structures among all
known solvates of EE. The highest match index was just 0.57 and it was found for
1,4-dioxan and nitromethane which show a similar arrangement of EE molecules into
sheets. Other solvates of EE show a range of distinctly different structures, Table
4.11.

Table 4.10 Pattern match indices.


1

10

11

1 0.00 0.00 0.00 0.00 0.00 0.31 0.00 0.00 0.00 0.00 0.00
2 0.00 0.00 0.00 0.00 0.00 0.25 0.57 0.00 0.00 0.00 0.00
3 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00
4 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.17 0.00 0.00 0.00
5 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00
6 0.31 0.25 0.00 0.00 0.00 0.00 0.49 0.00 0.00 0.00 0.00
7 0.00 0.57 0.00 0.00 0.00 0.49 0.00 0.18 0.00 0.00 0.00
8 0.00 0.00 0.00 0.17 0.00 0.00 0.18 0.00 0.00 0.00 0.00
9 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00
10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00
11 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00

Table 4.11 Top matches for the pairs of PXRD patterns of crystalline forms of EE.
Match indices

Identification numbers of pairs of forms of EE

0.57

2 and 7 EE 1,4-dioxan and nitromethane solvates

0.49

6 and 7 EE methanol and nitromethane solvates

0.31

1 and 6 EE acetonitrile and methanol solvates

0.25

2 and EE 1,4-dioxane and methanol solvates

0.18

7 and 8 EE nitromethane solvate and EE

0.17

4 and 8 EE ethanol solvate and EE

88

Molecular packing and H-bonding of ethinylestradiol solvates


The hydrogen bonding network of the EE acetone solvate is similar to the 1D
chain found in the pure form of EE with the solvent taking the place of the second
EE molecule. The EE molecules are orientated headtotail with O1H1O2
(2.703 ) interactions. The acetone carbonyl acts as an acceptor in the O2H2O3
(2.678 ) H-bond, Fig 4.8.

Fig. 4.8 1D H- bonded chain of EE acetone solvate extending in b direction.

The DMSO solvate has a DMSO:EE ratio of 2:1 and it is the only one with
zero-dimensional H-bonding. Both ends of the EE molecule are H-bonded to DMSO
molecules through O1H1O3 (2.673 ) and O2H2O4 (2.710 ) interactions,
Fig. 4.9.

Fig. 4.9 0D H-bonding network of EE DMSO solvate.

In the structure of EE pentan-2-ol solvate molecules of EE are orientated


headtotail way and linked through the O2H2O1 (2.801 ) H-bond. Pentan-2ol molecules participate in another two H-bonds: O1H1O3 (2.674 ) and
O3H3O2 (2.776 ). This forms 2D H-bonding network which is parallel to the
ab direction, Fig. 4.10.

89

Fig. 4.10 2D H-bonded sheets of EE pentan-2-ol solvate.

90

Unused Hydrogen Bonding Capacity in Steroid Crystal


Structures
Several well established examples of structures with non-hydrogen-bonded
donors or acceptors can be found in the literature. This has been explained by steric
hindrance, rigid, awkward shaped molecules or dipole-dipole interactions which
stabilize the crystal lattice and allow for molecules to pack into more favourable
structures than those with H-bonding motifs [148, 156]. Unused hydroxyl groups
were also analyzed by X-ray diffraction and IR spectroscopy in some carboxylic
acids [157].
To investigate lack of conventional hydrogen bonding among steroid
compounds two searches of the Cambridge Database (CSD, version 1.13) [45] were
performed for entries containing both C=O and O-H groups in the first case and only
O-H in the second case. The constraints in both searches were as follows: steroids:
no solvates and hydrates, 3D determined, no ions, no powders, no errors, no
polymeric, only organic structures, no(C=OH-O or O-HO-H). 85 hits for lack of
C=OH-O and 134 hits for no O-HO-H contact were found. The hits were
analysed manually and inappropriate entries were eliminated. Examining steroid
structures on the CSD reveals 14 related examples with unused O-H groups
(FNPEYO, FUFDAL, GAPGAF, KANYAA, LAKJAJ, LALXIF, MBRHES,
NPREYO, QEYBAX, QUMJOX, RAMYAG, SUQDUE, WATRIT, YAPZEU) and
10 with unused C=O groups (AFAWOU, CAZXAC10, EYHENO, HMESDP,
ISTEST, LOHVAF, NOTEST01, NPTYMO, PAMLUL, ZUKRUS).
Unused good proton donors and acceptors are rare in the crystal structures of
organic solids. However several entries which were found in CSD represent
examples of unused hydroxyl and carbonyl groups in steroids compound. It seems
that this feature is more likely to occur for steroids rather than any other classes of
compounds due to their rigid nature and molecular shape.

91

Discussion

It has been shown that shape of the molecule has a significant influence on
the crystal packing and nature of intramolecular interactions formed in the crystal
structures. Incorporation of solvent molecules into the crystal lattice can compensate
for the inefficiency with which rigid awkward shaped molecules pack during crystal
growth. The first high quality solvent free crystals of EE were grown by sublimation.
Solution crystallization of EE gave a wide variety of solvated structures. Seeding of
saturated solutions with crystals of the solvent free form also resulted in formation of
three new or already known solvates. This leads to the conclusion that crystals of the
pure form of EE can only be obtained from the vapour phase. No other solvent free
form of EE was observed during the crystallization experiments and DSC-TG
analysis of solvated forms. The low melting form, reported in the literature as well as
in the introduction to this chapter, is thus probably wrong.
The analysis of H-bonding shows similarities between EE and polymorph 1
of Stanozolol. The hydroxyl group of one of the molecules in the asymmetric unit is
not H-bonded. These features were attributed to the rigid awkward shape of the
molecule. All H-bonding donors and acceptors are used in the solvated structures
forming a range of different H-bonding patterns. No voids were found in the pure
form of EE.
Crystal structures of all of the crystalline forms of EE were compared and
analysed using their calculated powder patterns. No isomorphous structures were
found. Small similarities can be found for 1,4-dioxan and nitromethane EE solvates
which have the highest calculated match index of 0.57.

92

Chapter 5:
Detection of Bending Properties of Organic
Crystals: Application to Naftazone and 1,3Dinitrobenzene

93

Introduction
Bending phenomena of molecular crystals

Correlation between bending properties of molecular solids and crystal


packing was first described by C. M. Reddy and his co-workers [158]. His study
includes the investigation of 60 molecular crystals and he reports that 17 can be bent
without breaking on application of a mechanical stress. This phenomenon, although
now widespread for organic compounds is still rare among pharmaceuticals. Indeed,
venlafaxine hydrochloride is the only pharmaceutical that has been reported to have
bending properties.
The bending direction of molecular crystals is associated with anisotropy in
the intermolecular interactions [159, 160]. In the presence of interactions of
comparable strength in all directions, (i.e. a normal 3D H-bonding network), crystals
are hard and brittle. If the crystal structure contains strong and weak interactions in
nearly perpendicular directions the crystal is likely to bend on the application of
mechanical stress.
For reasons which will be clear below it was decided to examine the bending
properties of two compounds, naftazone and 1,3-dinitrobenzene. Crystals were
grown both by sublimation and from solution. SEM and optical microscopy were
used in the preliminary examination of morphology changes. In order to establish the
bending direction, crystal faces were indexed using Oxford program suite CrysAlis
Pro, version 171.34.36.

94

Experimental Section
Synthesis of naftazone
0.11 g of semicarbazide hydrochloride was dissolved in 3ml of distilled water
and added to 30ml of an ethanol suspension of 0.32g of 1,2-naphtoquinone. The clear
brown solution was heated under reflux for 4 hours and the solution was left to cool
overnight. The orange needle shaped crystals of naftazone (meta-stable form II) were
filtered off, washed with ethanol and dried.

H2O

HCl

Scheme 5.1 Synthesis of naftazone.

Crystal growth of naftazone and 1,3-dinitrobenzene


When metastable form II was recrystallized from ethanol, orange crystals of
stable form I were collected, Fig. 5.1. Crystallization by sublimation, method A, in
the temperature range 140 to 160 C gave only the stable form I of naftazone, Fig.
5.2.

Fig. 5.1 Crystals of naftazone grown from ethanol (form II).


95

Fig. 5.2 Crystals of naftazone (form I) grown by LTGSV via method A.

1,3-dinitrobenzene crystals were grown by slow evaporation of saturated


solution from acetonitrile at room temperature and by vacuum sublimation at 75 C,
Fig. 5.3.

Fig. 5.3 Crystals of 1,3-dinitrobenzene grown by LTGSV via method A.

96

Results
Detection of bending properties of naftazone
Naftazone is an API which is a veinotonic and vasculoprotector drug. Two
polymorphic forms are known and it is quite difficult to ensure the crystallization of
one pure form from solution. It is an example of concomitant polymorphism and has
been examined in some detail [55]. Following the successful use of sublimation for
polymorph selection for stanozolol and EE it was decided to apply it to naftazone. In
the temperature range from 140 to 160 C, crystallization of naftazone by method A
sublimation gave good quality crystals of the stable form I only. No crystals of the
metastable form were detected.

Fig. 5.4 Bending nature of naftazone crystals grown from the gas phase.

Several different crystal habits were observed. Together with flattened rod
and plate like crystals there were also bent rods and some ultra-thin plates which
were curved, Fig. 5.4. The bent rods and curved plates were not observed for crystals
grown from solution. It was also noticed that the crystals bent without breaking in the
direction of the initially observed bend on application of a mechanical stress, like
shown on Fig. 5.5. This property, although established for a range of organic
compounds, is still rare among pharmaceuticals and naftazone is just the second
example. The only other reported case is venlafaxine hydrochloride. It was the
observation of curved plates on sublimation of the compound that suggested that this

97

might be a method for the detection of bending crystals. It was also decided to study
1,3-dinitrobenzene which had been described by C.M. Reddy but which was difficult
to crystallize from solution and could not be face indexed.

Fig. 5.5 Naftazone crystal mounted on a fibre (left and face indexation (right) of
crystal with plate habit.
In the naftazone structure molecules are connected via N3H2O2 (2.915
) into H-bonded chains which extend in the b direction. Apart from weak
C3H2O2 interactions no significant short contacts in the other two directions are
present in the crystal structure of naftazone. Face indexation showed that bending is
about the b-axis which is also the direction of the 1D H-bonding motif, Fig. 5.6-7.
Thus the 1D chains are not broken when the lattice bends.

Fig. 5.6 Molecular arrangements of naftazone, Form I, view down the c axis.

98

Fig. 5.7 Molecular arrangements of naftazone, Form I, view down the b axis.

Detection of bending properties of 1,3-dinitrobenzene


1,3-dinitrobenzene is known to bend on the application of mechanical stress
but the crystals grown from solution were of poor quality and it was not possible to
index their faces and to determine the bending direction. Crystals which were grown
by sublimation, method A, reveal their bending properties as among the rod shaped
crystals some bent crystals were observed, Fig 5.3. The crystal quality was suitable
for face indexation. To establish the bending face, one of these crystals was mounted
on a fibre, Fig. 5.8.

Fig. 5.8 Face indexation of 1,3-dinitrobenzene.

99

Face indexation established that the bending of 1,3-dinitrobenzene crystals is


about the b axis. This was predicted by C. M. Reddy from the crystal packing which
shows anisotropic distribution of intermolecular interaction [158]. The molecules are
stacked in a zigzag fashion along the c axis, Fig 5.9. There are also weak CHO
interactions are present in a and b directions.

Fig. 5.9 Molecular arrangement 1,3-dinitrobenzene.

100

Discussion
Sublimation especially when LTGSV is used provides easy optical detection
of molecular solids which have plastic behaviour. This phenomenon is unique for
crystals grown from the gaseous phase and it was not observed for crystals of the
same compound grown from solution.
The examples presented here of naftazone and 1,3-dinitrobenzene show that
compounds with bending properties tend to yield crystals with bent and curved faces
among normal crystals only when grown by sublimation. The ability to grow such
crystals is particularly important when experimental recognition of bending direction
is difficult. Deformed crystals grown by sublimation can be directly mounted on a
fibre and used for face indexation without the necessity of applying any mechanical
stress.

101

Chapter 6:
Combined Synthesis, by Thermal
Transformation, and Crystal Growth of p(phenylsulfonyl)biphenyls

102

Introduction
Organosulfones are very useful intermediates in many different fields such as
agrochemicals, pharmaceuticals [161] and polymers [162]. Aryl sulphones in
particular were reported as potential antifungal, antibacterial, antitummoral and antiHIV-1 agents [163].
Application of method A to 1-[(1E,3E,5E)-4,6-bis(phenylsulfonyl)hexa-1,3,5trien-1-yl]-4-benzene led to the production of crystals of the corresponding 4(phenylsulfonyl)biphenyl. Methoxy (OMe) and nitro (NO2) derivatives of 1[(1E,3E,5E)- 4,6-bis (phenylsulfonyl) hexa- 1,3,5- trien-1-yl]- 4-benzene were
synthesized and crystal formation of the corresponding 4-(phenylsulfonyl)biphenyls
was observed.
4-(phenylsulfonyl)biphenyl is usually prepared in Suzuki-Miyaura coupling
[164], Friedel-Crafts [165] and other multistep reactions which require use of both
solvents and catalysts [161]. Method A was applied as a combined process of
synthesis and crystal growth. The process is then a one-step synthesis which does not
require the presence of solvents, a catalyst or further purification. The product is
crystalline and suitable for structure determination.
Crystal structures of all compounds included in this study were determined
and the influence of para-substitution on the inter-molecular interactions have been
analysed.

103

Experimental Section
Synthesis of 1-[(1E,3E,5E)-4,6-bis(phenylsulfonyl)hexa-1,3,5-trien-1yl]-4-benzene and OMe and NO2 derivatives
Equivalent amounts (1eq) of 1,3-bisphenylsulfonyl, trans-cinnamaldehyde
and 33eq. of aluminium oxide were used in the synthesis of (1). The suspension was
stirred for 4 hours at room temperature. The aluminium oxide was extracted with
CH2Cl2 and the resulting solution was concentrated to bright yellow oil. This oil was
dissolved in hot isopropyl alcohol and then chilled in a -20C freezer for one hour.
The resulting participate was readily filtered. Trans-nitrocinnamaldehyde and transmethoxycinnamaldehyde were used for the preparation of their corresponding
derivatives, scheme 6.1.

+
O

(1)
O

R= OCH3, NO2
Scheme 6.1 Synthesis of 1-[(1E,3E,5E)-4,6-bis(phenylsulfonyl)hexa-1,3,5-trien-1yl]-4-benzene, methoxy and nitro derivatives.

Crystallization of 1-[(1E,3E,5E)-4,6-bis(phenylsulfonyl)hexa-1,3,5trien-1-yl]-4-benzene, OMe and NO2 derivatives


Crystallization from a range of organic solvents gave twinned crystals or noncrystalline matter. Crystallization by slow evaporation from acetonitrile at room
temperature gave yellow crystals of 1-[(1E,3E,5E)-4,6-bis(phenylsulfonyl)hexa-

104

1,3,5-trien-1-yl]-4-benzene and corresponding OMe and NO2 derivatives suitable for


single X-ray diffraction analysis, Fig. 6.1-3.

Fig. 6.1 Crystals of 1-[(1E,3E,5E)-4,6-bis(phenylsulfonyl)hexa-1,3,5-trien-1-yl]-4benzene grown from acetonitrile and corresponding numbering scheme.

Fig. 6.2 Crystals of 1-[(1E,3E,5E)-4,6-bis(phenylsulfonyl)hexa-1,3,5-trien-1-yl]-4methoxybenzene grown from acetonitrile and corresponding numbering scheme.

Fig. 6.3 Crystals of 1-[(1E,3E,5E)-4,6-bis(phenylsulfonyl)hexa-1,3,5-trien-1-yl]-4nitrobenzene grown from acetonitrile and corresponding numbering scheme.

105

Synthesis and crystal growth of 4-(phenylsulfonyl)biphenyl, OMe


and NO2 derivatives

Preparation and crystal growth of p-(phenylsulfonyl)biphenyls took place on


a Petri dish in a Heraeus VT025 vacutherm oven maintained at a pressure of 10-9
GPa using sublimation temperatures of 115 C (R = H and OCH3) and 125 C (R =
NO2). After approximately five hours colourless crystals formed on the lid of the
Petri dish, Fig. 6.4-6, and a brown residue was observed on the bottom dish.

Fig. 6.4 Crystals of 4-(phenylsulfonyl)biphenyl grown by sublimation, method A, and


corresponding numbering scheme.

Fig. 6.5 Crystals of 4-methoxybiphen-4-yl phenyl sulphone


grown by sublimation, method A, and corresponding numbering scheme.

106

Fig. 6.6 Crystals of 4-nitrobiphen-4-yl phenyl sulphone grown by sublimation,


method A, and corresponding numbering scheme.

107

Results
Combined synthesis, by thermal transformation, and crystal growth
Method A, as a rapid technique for crystal growth, was applied to 1[(1E,3E,5E)-4,6-bis(phenylsulfonyl)hexa-1,3,5-trien-1-yl]-4-benzene

and

para

substituted OCH3 and NO2 derivatives. Upon heating and in vacuum these
compounds undergo cyclization which leads to the formation and crystal growth of
4-(phenylsulfonyl)biphenyl and related OCH3 and NO2 compounds. Schemes 6.2 and
6.3 illustrate possible mechanisms for this thermal transformation. However because
the formation of a highly unstable vinyl radical shown in scheme 6.2 is problematical
and because the existence of a zwiterion form in the gas phase was reported for some
amino acids [166] and because gas phase reaction kinetics have suggested a gas
phase zwitterion mechanism [167] a zwitterion mechanism is presented as a
possibility in scheme 6.3.

SO 2Ph

R = H, NO 2, OCH 3
SO 2Ph

SO 2Ph

SO 2Ph

(1)

homolysis
SO 2Ph

PhSO 2H

SO 2Ph

SO 2Ph

radical

aromatisation
H

(2)

HC

R
SO 2Ph

Scheme 6.2 Possible mechanism of thermal transformation of 1-[(1E,3E,5E)-4,6bis(phenylsulfonyl)hexa-1,3,5-trien-1-yl]-4-benzene via radical aromatisation.

108

R = H, NO 2, OCH 3
SO 2Ph

SO 2Ph

SO 2Ph

(1)

PhO 2S

SO 2Ph

SO 2Ph

PhSO 2H

Elimination of
PhSO2H

H
R

(2)

SO 2Ph

Elimination of PhSO2H:
H

O S O
Ph

O S O

H+

Ph

HO S O
Ph

B-

Scheme 6.3 Possible mechanism of thermal transformation of 1-[(1E,3E,5E)-4,6bis(phenylsulfonyl)hexa-1,3,5-trien-1-yl]-4-benzene via formation of zwitterion.

Analysis of intra-molecular interactions


Crystal data for 1-[(1E,3E,5E)-4,6-bis(phenylsulfonyl)hexa-1,3,5-trien-1-yl]4-benzene, bis(phenylsulfonyl)-hexatrienes and corresponding NO2 and OCH3
derivatives are given in Tables 6.1-3.

109

Table 6.1 Crystal data for 1-[(1E,3E,5E)-4,6-bis(phenylsulfonyl)hexa-1,3,5-trien-1yl]-4-benzene I and bis(phenylsulfonyl)-hexatrienes II.

Identification number

(I)

(II)

Empirical formula

C24 H20 O4 S2

C18 H14 O2 S

Formula weight

436.52

294.35

Temperature / T

299.1

297.0

Wavelength /

0.7107

0.7107

Crystal system

Monoclinic

Monoclinic

Space group

P21

P21/c

a/

5.9436(3)

16.5020(12)

b/

14.0768(8)

7.8520(5)

c/

13.0684(8)

11.3748(9)

100.537(5)

101.480(8)

V / 3

1074.95(11)

1444.39(18)

/ Mg/m-3 (calculated)

1.349

1.354

/ mm-1

0.276

0.225

Reflections collected

5206

6662

Independent reflections

2704 [Rint = 0.0344]

2650 [Rint = 0.0331]

Reflections observed (>2)

2287

1648

Data Completeness

0.999

0.999

Goodness-of-fit on F2

1.059

1.066

Final R indices [I>2(I)]

R1 = 0.0540

R1 = 0.0519

wR2 = 0.1286

wR2 = 0.1115

R1 = 0.0666

R1 = 0.0970

wR2 = 0.1436

wR2 = 0.1506

R indices (all data)

110

Table 6.2 Crystal data for 1-[(1E,3E,5E)-4,6-bis(phenylsulfonyl)hexa-1,3,5-trien-1yl]-4-methoxybenzene III and 4-methoxybiphen-4-yl phenyl sulphone IV.

Identification number

(III)

(IV)

Empirical formula

C25 H22 O5 S2

C19 H16 O3 S

Formula weight

466.55

324.38

Temperature / T

150.0

296.3

Wavelength /

0.7107

0.7107

Crystal system

Monoclinic

Monoclinic

Space group

P21/c

P21

a/

5.84331(18)

a = 6.7378(3)

b/

25.5606(8)

b = 7.9901(4)

c/

14.9540(5)

c = 15.1328(7)

90.258(3)

98.700(5)

Volume / 3

2233.49(12)

805.31(7)

/ Mg/m-3 (calculated)

1.387

1.338

/ mm-1

0.274

0.213

Reflections collected

32900

3681

Independent reflections

4078 [Rint = 0.0516]

2209 [Rint = 0.0255]

Reflections observed (>2)

3615

1914

Data Completeness

0.999

0.998

Goodness-of-fit on F2

1.018

1.055

Final R indices [I>2(I)]

R1 = 0.0384

R1 = 0.0384

wR2 = 0.0838

wR2 = 0.0854

R1 = 0.0463

R1 = 0.0482

wR2 = 0.0875

wR2 = 0.0909

R indices (all data)

111

Table 6.3 Crystal data for 1-[(1E,3E,5E)-4,6-bis(phenylsulfonyl)hexa-1,3,5-trien-1yl]-4-nitrobenzene V and 4-nitrobiphen-4-yl phenyl sulphone VI.

Identification number

(V)

(VI)

Empirical formula

C24 H19 N O6 S2

C18 H13 N O4 S

Formula weight

481.52

339.35

Temperature / K

149.9

149.9

Wavelength /

0.7107

0.7107

Crystal system

Triclinic

Monoclinic

Space group

P1

P21/c

a/

5.86394(16)

13.1110(9)

b/

8.2153(3)

7.6752(5)

c/

11.8849(4)

15.2536(13)

87.204(3)

77.171(3)

86.386(2)

Volume / 3

556.78(3)

1513.47(19)

/ Mg/m-3 (calculated)

1.436

1.489

/ mm-1

0.281

0.237

Reflections collected

4109

6953

Independent reflections

2552 [Rint = 0.0125]

2766 [Rint = 0.0445]

Reflections observed (>2)

2466

1772

Data Completeness

0.999

0.999

Goodness-of-fit on F2

1.150

0.998

Final R indices [I>2(I)]

R1 = 0.0321

R1 = 0.0541

wR2 = 0.0961

wR2 = 0.870

R1 = 0.0335

R1 = 0.1014

wR2 = 0.0974

wR2 = 0.1021

R indices (all data)

99.600(7)

112

I and III crystallized in the monoclinic space groups P21 and P21/c, whereas
V was found in triclinic space group P1. The analysis of the inter-molecular
interactions shows phenyl rings are not involved in - stacking interactions. The
only phenyl which participates in C-H contact was found in the structure of III,
Fig. 6.7. In the crystal structures of I and V only weak C-HO contacts were found,
Fig. 6.8.

Fig. 6.7 Weak C-H interaction in the structure of1-[(1E,3E,5E)-4,6bis(phenylsulfonyl)hexa-1,3,5-trien-1-yl]-4-methoxybenzene, III.

Fig. 6.8 Weak C-HO interaction in the structure of 1-[(1E,3E,5E)-4,6bis(phenylsulfonyl)hexa-1,3,5-trien-1-yl]-4-nitrobenzene, V.

II, IV and VI crystallized in the monoclinic space groups P21/c, P21 and
P21/c respectively. The biphenyl group in the crystal structure of II was found to be
113

almost planar, with the twist angle of just 3.85. This differs significantly from the
gas phase structure of biphenyl where the twist angle is approximately 40 [168].
This is also often found in the crystal structures of other biphenyls [169, 170]. For IV
and VI the values of the dihedral angles correspond to 11.48 and 18.73.
The analysis of the inter-molecular interactions shows that all the phenyl
rings in the crystal structure of II participate in - stacking interactions, Fig. 6.9.
These interactions are reduced in the crystal structure of IV where only para
substituted phenyl is involved, Fig. 6.10. No - stacking interactions were found in
the structure of VI where the para-phenyl position was substituted with a OMe
group.

Fig. 6.9 Crystal packing of 4-(phenylsulfonyl)biphenyl showing maximum capacity of


- stacking interaction.

Fig. 6.10 - stacking interaction in the structure of 4-nitrobiphen-4-yl phenyl


sulphone, VI.
114

Discussion
Application

of

method

to

some

1-[(1E,3E,5E)-4,6-

bis(phenylsulfonyl)hexa-1,3,5-trien-1-yl]-4-benzenes led to the production of


crystals of the corresponding 4-(phenylsulfonyl)biphenyls. Method A can be an
alternative and effective method for preparation of 4-(phenylsulfonyl) biphenyl and
related derivatives. This approach allows rapid production of already crystalline
material without the necessity of using solvents and catalysts. Also due to the
formation of crystals by sublimation further purification of the product is also
unnecessary.
Crystals were analyzed using single crystal X-ray diffraction. The
intermolecular interactions in the crystal structures of the 4-(phenylsulfonyl)
biphenyls show that - stacking interactions are reduced by para-phenyl substitution
with NO2 and OMe groups.

115

Chapter 7:
Using the Crystallization Driving Force to
Control Crystal Morphology:
Application to 1,4-Naphthaquinone, MetalFree Phthalocyanine and Benzoic Acid

116

Introduction
The presence of a radial temperature gradient across the de-sublimation
surface, when crystals are grown via method B, suggested that there might also be a
driving force gradient present. To investigate any effect that a driving force gradient
might have on crystal habit compounds were chosen which are known to have a
tendency to give needle growth from solution and which have simple stacked
structures without any strong H-bonding networks [171, 172]. The compounds
chosen were metal-free phtalocyanine, 1,4-naphthoquinone and benzoic acid. The
same method was used to grow crystals of tetraphenyltin (TPT). TPT is similar to the
three compounds chosen for this study in that it does not have any strong directional
H-bonding but in contrast to the others it does not have a stacked structure due to its
near spherical shape.
The growth of crystals of metal free phthalocyanine by sublimation has been
reported using a horizontal two zone furnace by two groups with and without the use
of a carrier gas [90, 171]. It is difficult to compare the crystallization driving force
variations in those experiments with those observed here. It is suggested in both
studies that the driving force is lowest closest to the sublimation region. In the
second study a ring of amorphous material was reported closest to the heater with a
clear gap before any crystals were observed. This latter observation supports the
contrary idea that the driving force would be highest close to the heater. In this study
the highest driving force region was recognized on the basis of high nucleation level
and glass formation which was found close to the small heater. In contrast the edge
of the de-sublimation surface which displayed a significantly lower number of
nucleation sites was defined as the lowest driving force region.
The results for all compounds were analyzed using optical microscopy, SEM
and single crystal X-ray diffraction. The crystal structure of 1,4-naphthoquinone was
re-determined as the only one found in the CSD, which was reported in 1965 [173].

117

Experimental section
Metal-free phthalocyanine, 1,4-naphthaquinone, benzoic acid and TPT were
grown by sublimation, method B, described in chapter 2. The crystals obtained in
each experiment are shown in Fig. 7.1. Experimental conditions are listed in Table
7.1. Crystals of metal-free phthalocyanine were identified as the form by
comparing their FT-IR spectra with those reported in the literature [174].

Fig. 7.1 Left to right: 1,4-naphthaquinone, metal-free phthalocyanine and benzoic


acid crystals grown under different driving force conditions: 1) high driving force
and 4) low driving force region.

Table 7.1 Crystallization conditions during crystal growth of metal-free


phthalocyanine (1), 1,4-naphthaquinone (2), benzoic acid (3) and TPT (4).
Identification
number

Sublimation

T1 [C]*

T4 [C]**

T [C]

T [C]

(1)

474

328

314

14

(2)

81.5

67.4

63.6

3.8

(3)

89.0

64.1

56.1

4.0

(4)

157

123

117

T1 - temperature on the de-sublimation surface in the high crystallization driving


force region

**

T4 - temperature on the de-sublimation surface in the low crystallization driving


force region

118

Results
Application to metal-free phthalocyanine

Fig. 7.2 Crystal growth of metal-free phthalocyanine under a range of crystallization


driving forces.

The longest needles were observed close to the temperature region where the
driving force is relatively low, Fig. 7.2.2-.3. As the driving force increases a rapid
change in the crystal habit was observed, Fig. 7.3.

Fig. 7.3 SEM image of metal-free phthalocyanine crystals grown under high driving
force conditions.

Phthalocyanine has a highly anisotropic structure, where the intermolecular


interactions are only defined by - interactions and which extend in the b direction,
Fig. 7.4. Molecular packing shows that in the low driving force conditions
phthalocyanine forms needles parallel to the stacking direction. The stacking
direction was defined on the basis of the angles between the plane of the molecule
and the 100, 010 and 001 faces and they are -49.330 , -45.848 , -62.960 respectively.
119

Fig. 7.4 Face indexation and molecular packing of metal-free phthalocyanine.

Application to 1,4-naphthaquinone

Fig. 7.5 Crystal growth of 1,4-naphthaquinone under a range of crystallization


driving forces.

Crystal data for 1,4-naphthoquinone are given in Table 7.2. The observed
habit changes of 1,4-naphthoquinone crystals grown from the vapour are shown in
Fig 7.5. In the high driving force region the sublimed compound is glass like, Fig.
7.5.1, and no single crystals were observed. As the driving force decreases with the
distance from the heater, block shaped crystals are initially observed, Fig. 7.5.2.
However towards the edge of the Petri dish the blocks evolve into needles as shown
in Fig. 7.5.4. The aspect ratio (length/thickness) of the crystals was calculated and
found to be inversely proportional to the distance from the centre of the desublimation surface, Fig. 7.6.

120

Table 7.2 Crystal data and for 1,4-naphthaquinone.

Compound name

1,4-naphthoquinone

Empirical formula

C10 H6 O2

Formula weight

158.15

Temperature / T

150.0

Wavelength /

0.7107

Crystal system

Monoclinic

Space group

P21/c

a/

8.1933(3)

b/

7.7393(3)

c/

11.4405(4)

94.486(3)

Volume / 3

723.23(4)

/ Mg/m-3 (calculated)

1.452

/ mm-1

0.102

Reflections collected

3141

Independent reflections

1320 [Rint = 0.0120]

Reflections observed (>2)

1184

Data Completeness

0.996

Goodness-of-fit on F2

1.054

Final R indices [I>2(I)]

R1 = 0.0306, wR2 = 0.0834

R indices (all data)

R1 = 0.0347, wR2 = 0.0859

121

Fig. 7.6 Aspect ratio vs. distance from the centre of the Petri dish.

The crystal faces of the blocks and needles were indexed, Fig 7.7-8. The
molecular packing, Fig 7.7, shows that low driving force conditions, similar to
phthalocyanine, favours the growth of needles parallel to the stacking direction. The
angles between the plane of the molecules and 100 (38.479 ), 010 (-70.107 ) and 001
(-62.695) faces illustrate that under low driving force conditions growth along the a
direction is dominated by molecules attaching flat to the 100 face.

Fig. 7.7 Face indexation of needle shaped crystal grown at low driving forces and
molecular packing of 1,4-naphthaquinone.

122

Fig. 7.8 Face indexation of block shaped crystal grown at high driving forces.

Application to benzoic acid

Fig. 7.9 Crystal growth of benzoic acid under a range of crystallization driving
forces.

Fig. 7.9 represents the effect of a range of driving forces on the crystal habit
of benzoic acid. At a high driving force, Fig. 7.9.1, benzoic acid forms twinned
crystals. As the temperature decreases across the condensation area, plate like
crystals, Fig. 7.9.2, change into needles approximately 15 mm in length, Fig. 7.9.4.
Benzoic acid forms hydrogen bonded dimers which extend into ribbons with
weak C-HO interactions. There are also - stacking interactions parallel to the
needle growth direction. The angle between the plane of the molecule and the 100 (53.896 ), 010 (48.217 ) and 001 (-58.052 ) crystal faces show the same tendency
observed for the other two cases above of 1,4-naphthaquinone and metal-free
phthalocyanine.

123

Fig. 7.10 Crystal packing of benzoic acid view down b direction.

Application to tetraphenyltin
The crystallization driving force range provided by method B has no effect on
the crystal habit of TPT, Fig. 7.11, as crystals of the same size and shape were
observed across the de-sublimation surface. This leads to the conclusion that only the
crystal habit of planar molecules with stacked structures and no strong intermolecular
interactions are dependent on the crystallization driving force.

Fig. 7.11 Crystals of TPT grown by the sublimation, method B.

124

Discussion
Sublimation method B requires the use of a small heater in a conventional
vacuum oven which is only employed as a vacuum chamber. The use of a small
heater allows generation of a range of crystallization driving forces across the
condensation area and expands the sublimation temperature range up to 500 C. A
high driving force region, at the center of the Petri dish, favors the formation of new
nuclei at the expense of the growth of existing crystals. A decreasing driving force
towards the edge of the Petri dish results in a lower level of nucleation and growth of
the nuclei into larger crystals.
The crystal habit of the compounds studied was found to be highly dependent
on the crystallization driving force. A low crystallization driving force favors needle
growth. In the absence of directional hydrogen-bonds the crystal growth of planar
molecules in the stacking direction is intrinsically promoted by the low step
generation energies in that direction and if flat molecules initially attach flat to all
crystal faces when the crystallization driving force is low then growth in all other
directions will be disfavored and long needles will be observed. In contrast to the
behavior observed for flat molecules tetraphenyltin, which has a near spherical shape
and no directional intermolecular forces, gives isotropic crystals under the same
crystallization conditions.

125

Chapter 8:
Crystallographic Data Electronic
Information

126

1) Polymorph 1 of stanozolol

7
Table 8.1 Crystal data and structure refinement for polymorph 1 of stanozolol.
Identification code

stanozolol_1

Empirical formula

C21H32N2O

Formula weight

328.49

Temperature

298(2) K

Wavelength

0.7107

Crystal system

Orthorhombic

Space group

P212121

Unit cell dimensions

a = 7.3164(4)
b = 21.562(2)
c = 24.0058(11)

Volume

3787.1(5) 3

Density (calculated)

1.152 Mg/m3

Absorption coefficient

0.070 mm-1

F(000)

1440

Crystal size

0.80 x 0.10 x 0.10 mm


127

Theta range for data collection

2.9360 to 29.1583

Index ranges

-5<=h<=9; -28<=k<=17; -16<=l<=32

Reflections collected

11756

Independent reflections

6695 [Rint = 0.0278]

Reflections observed (>2)

3213

Data Completeness

0.998

Absorption correction

Semi-empirical from equivalents

Max. and min. transmission

1.00000 and 0.97969

Refinement method

Full-matrix least-squares on F2

Data / restraints / parameters

6695 / 0 / 440

Goodness-of-fit on F

0.756

Final R indices [I>2(I)]

R1 = 0.0380 wR2 = 0.0616

R indices (all data)

R1 = 0.1056 wR2 = 0.0703

Absolute structure parameter

-1.2(14)

Largest diff. peak and hole

0.163 and -0.129 e.-3

Table 8.2 Atomic coordinates ( x 104) and equivalent isotropic displacement


parameters (2 x 103) for polymorph 1 of stanozolol. U(eq) is defined as one third of
the trace of the orthogonalized Uij tensor.
Atom

U(eq)

O(1)

8683(2)

7743(1)

9076(1)

54(1)

O(2)

8633(3)

1717(1)

8157(1)

93(1)

N(1)

8533(3)

3450(1)

6427(1)

54(1)

N(2)

6725(3)

3530(1)

6533(1)

51(1)

N(3)

12265(3)

6178(1)

10432(1)

54(1)

N(4)

10585(3)

6003(1)

10601(1)

48(1)

C(1)

9599(4)

3854(1)

6709(1)

57(1)

C(2)

8447(3)

4222(1)

7019(1)

43(1)

C(3)

8815(3)

4748(1)

7409(1)

50(1)

C(4)

7093(3)

5152(1)

7498(1)

34(1)

C(5)

7403(3)

5585(1)

8003(1)

34(1)

C(6)

9089(3)

5999(1)

7948(1)

51(1)

C(7)

9389(3)

6423(1)

8456(1)

47(1)
128

C(8)

7710(3)

6810(1)

8576(1)

31(1)

C(9)

7677(3)

7175(1)

9129(1)

36(1)

C(10)

5610(3)

7291(1)

9220(1)

46(1)

C(11)

4569(3)

6804(1)

8867(1)

41(1)

C(12)

6079(3)

6372(1)

8655(1)

31(1)

C(13)

5677(3)

5952(1)

8163(1)

35(1)

C(14)

4136(3)

5500(1)

8299(1)

52(1)

C(15)

3753(3)

5054(1)

7813(1)

56(1)

C(16)

5477(3)

4712(1)

7629(1)

42(1)

C(17)

5006(3)

4272(1)

7144(1)

56(1)

C(18)

6716(3)

3999(1)

6901(1)

42(1)

C(19)

6710(4)

5528(1)

6962(1)

61(1)

C(20)

7391(3)

7273(1)

8096(1)

52(1)

C(21)

8486(4)

6823(1)

9622(1)

60(1)

C(22)

12647(4)

5782(1)

10016(1)

50(1)

C(23)

11212(4)

5365(1)

9920(1)

39(1)

C(24)

10961(3)

4847(1)

9518(1)

42(1)

C(25)

9495(3)

4382(1)

9722(1)

34(1)

C(26)

8944(3)

3939(1)

9239(1)

35(1)

C(27)

10571(3)

3586(1)

8978(1)

51(1)

C(28)

10007(3)

3138(1)

8515(1)

52(1)

C(29)

8525(3)

2689(1)

8719(1)

41(1)

C(30)

7606(4)

2269(1)

8273(1)

55(1)

C(31)

5754(4)

2109(1)

8541(1)

63(1)

C(32)

5376(4)

2598(1)

8990(1)

60(1)

C(33)

6904(3)

3075(1)

8917(1)

39(1)

C(34)

7346(3)

3507(1)

9400(1)

37(1)

C(35)

5688(3)

3893(1)

9570(1)

49(1)

C(36)

6142(3)

4341(1)

10038(1)

50(1)

C(37)

7772(3)

4757(1)

9899(1)

36(1)

C(38)

8132(3)

5205(1)

10385(1)

44(1)

C(39)

9918(4)

5522(1)

10302(1)

40(1)

C(40)

10287(3)

4025(1)

10222(1)

51(1)

129

C(41)

9306(4)

2270(1)

9177(1)

66(1)

C(42)

7357(4)

2579(1)

7712(1)

83(1)

Table 8.3 Bond lengths [] and angles [] for polymorph 1 of stanozolol.


Bond lengths []
O(1)-C(9)

1.435(2)

O(2)-C(30)

1.435(3)

N(1)-C(1)

1.351(3)

N(1)-N(2)

1.358(2)

N(2)-C(18)

1.342(3)

N(3)-C(22)

1.343(3)

N(3)-N(4)

1.348(2)

N(4)-C(39)

1.354(3)

C(1)-C(2)

1.376(3)

C(2)-C(18)

1.384(3)

C(2)-C(3)

1.496(3)

C(3)-C(4)

1.547(3)

C(4)-C(19)

1.545(3

C(4)-C(5)

1.547(3)

C(4)-C(16)

1.549(3

C(5)-C(6)

1.529(3)

C(5)-C(13)

1.539(3

C(6)-C(7)

1.539(3)

C(7)-C(8)

1.513(3)

C(8)-C(12)

1.535(3)

C(8)-C(20)

1.542(3

C(8)-C(9)

1.542(3)

C(9)-C(21)

1.524(3)

C(9)-C(10)

1.549(3)

C(10)-C(11)

1.549(3)

C(11)-C(12)

1.532(3)

C(12)-C(13)

1.517(3)

C(13)-C(14)

1.525(3)

C(14)-C(15)

1.537(3)

C(15)-C(16)

1.526(3)

C(16)-C(17)

1.542(3)

C(17)-C(18)

1.502(3)

C(22)-C(23)

1.402(3)

C(23)-C(39)

1.361(3)

C(23)-C(24)

1.487(3)

C(24)-C(25)

1.548(3)

C(25)-C(40)

1.540(3)

C(25)-C(26)

1.556(3)

C(25)-C(37)

1.558(3)

C(26)-C(34)

1.543(3)

C(26)-C(27)

1.545(3)

C(27)-C(28)

1.529(3)

C(28)-C(29)

1.534(3)

C(29)-C(33)

1.525(3)

C(29)-C(41)

1.532(3)

C(29)-C(30)

1.555(3)

C(30)-C(42)

1.515(3)

C(30)-C(31)

1.539(3)

C(31)-C(32)

1.533(3)

C(32)-C(33)

1.529(3)

C(33)-C(34)

1.521(3)

C(34)-C(35)

1.527(3)

C(35)-C(36)

1.519(3)

C(36)-C(37)

1.530(3)

C(37)-C(38)

1.537(3)

C(38)-C(39)

1.488(3)
130

Bond angles []
C(1)-N(1)-N(2)

112.8(2)

C(18)-N(2)-N(1)

102.86(19)

C(22)-N(3)-N(4)

103.7(2)

N(3)-N(4)-C(39)

112.5(2)

N(1)-C(1)-C(2)

106.8(2)

C(1)-C(2)-C(18)

104.4(2)

C(1)-C(2)-C(3)

131.7(2)

C(18)-C(2)-C(3)

123.8(2)

C(2)-C(3)-C(4)

111.56(19)

C(19)-C(4)-C(3)

109.11(19)

C(19)-C(4)-C(5)

111.3(2)

C(3)-C(4)-C(5)

109.17(18)

C(19)-C(4)-C(16)

110.7(2)

C(3)-C(4)-C(16)

107.76(19)

C(5)-C(4)-C(16)

108.76(18)

C(6)-C(5)-C(13)

112.52(17)

C(6)-C(5)-C(4)

113.76(18)

C(13)-C(5)-C(4)

112.67(18)

C(5)-C(6)-C(7)

113.20(19)

C(8)-C(7)-C(6)

111.3(2)

C(7)-C(8)-C(12)

108.35(18)

C(7)-C(8)-C(20)

109.61(19)

C(12)-C(8)-C(20)

111.93(19)

C(7)-C(8)-C(9)

117.3(2)

C(12)-C(8)-C(9)

101.27(17)

C(20)-C(8)-C(9)

108.23(18)

O(1)-C(9)-C(21)

107.15(19)

O(1)-C(9)-C(8)

110.51(19)

C(21)-C(9)-C(8)

114.06(18)

O(1)-C(9)-C(10)

112.02(18)

C(21)-C(9)-C(10)

110.5(2)

C(8)-C(9)-C(10)

102.65(18)

C(9)-C(10)-C(11)

107.02(19)

C(12)-C(11)-C(10)

103.87(18)

C(13)-C(12)-C(11)

118.81(18)

C(13)-C(12)-C(8)

114.97(18)

C(11)-C(12)-C(8)

103.08(18)

C(12)-C(13)-C(14)

111.01(18)

C(12)-C(13)-C(5)

110.03(17)

C(14)-C(13)-C(5)

109.32(18)

C(13)-C(14)-C(15)

111.92(19)

C(16)-C(15)-C(14)

111.76(19)

C(15)-C(16)-C(17)

109.32(19)

C(15)-C(16)-C(4)

113.18(19)

C(17)-C(16)-C(4)

113.2(2)

C(18)-C(17)-C(16)

110.4(2)

N(2)-C(18)-C(2)

113.1(2)

N(2)-C(18)-C(17)

123.7(2)

C(2)-C(18)-C(17)

123.1(2)

N(3)-C(22)-C(23)

112.0(2)

C(39)-C(23)-C(22)

104.5(2)

C(39)-C(23)-C(24)

122.6(2)

C(22)-C(23)-C(24)

132.9(2)

C(23)-C(24)-C(25)

111.50(19)

C(40)-C(25)-C(24)

108.01(19)

C(40)-C(25)-C(26)

111.85(17)

C(24)-C(25)-C(26)

110.00(18)

C(40)-C(25)-C(37)

110.55(19)

C(24)-C(25)-C(37)

108.10(17)

C(26)-C(25)-C(37)

108.26(18)

C(34)-C(26)-C(27)

112.84(19)

C(34)-C(26)-C(25)

112.32(18)

131

C(27)-C(26)-C(25)

113.84(18)

C(28)-C(27)-C(26)

113.40(19)

C(27)-C(28)-C(29)

110.92(19)

C(33)-C(29)-C(41)

112.8(2)

C(33)-C(29)-C(28)

107.8(2)

C(41)-C(29)-C(28)

109.7(2)

C(33)-C(29)-C(30)

101.3(2)

C(41)-C(29)-C(30)

108.1(2)

C(28)-C(29)-C(30)

117.0(2)

O(2)-C(30)-C(42)

104.9(2)

O(2)-C(30)-C(31)

110.8(2)

C(42)-C(30)-C(31)

111.4(2)

O(2)-C(30)-C(29)

113.0(2)

C(42)-C(30)-C(29)

114.0(2)

C(31)-C(30)-C(29)

102.9(2)

C(32)-C(31)-C(30)

107.3(2)

C(33)-C(32)-C(31)

104.6(2)

C(34)-C(33)-C(29)

114.00(19)

C(34)-C(33)-C(32)

118.74(19)

C(29)-C(33)-C(32)

103.7(2)

C(33)-C(34)-C(35)

111.65(19)

C(33)-C(34)-C(26)

109.83(18)

C(35)-C(34)-C(26)

109.87(18)

C(36)-C(35)-C(34)

111.79(19)

C(35)-C(36)-C(37)

112.4(2)

C(36)-C(37)-C(38)

109.67(19)

C(36)-C(37)-C(25)

112.68(18)

C(38)-C(37)-C(25)

113.26(19)

C(39)-C(38)-C(37)

109.74(19)

N(4)-C(39)-C(23)

107.3(2)

N(4)-C(39)-C(38)

126.8(2)

C(23)-C(39)-C(38)

125.9(2)

Table 8.4 Anisotropic displacement parameters (2 x 103) for polymorph 1 of


stanozolol. The anisotropic displacement factor exponent takes the form: -2 2 [h2 a*2
U11 + ... + 2 h k a* b* U12].
Atom

U11

U22

U33

U23

U13

U12

O(1)

59(1)

36(1)

68(1)

-18(1)

13(1)

-12(1)

O(2)

116(2)

64(2)

99(2)

-36(1)

-2(2)

12(1)

N(1)

59(2)

45(2)

57(2)

-18(1)

5(1)

11(1)

N(2)

55(2)

43(1)

55(2)

-19(1)

-3(1)

5(1)

N(3)

55(2)

40(1)

67(2)

-3(1)

-6(1)

-3(1)

N(4)

63(2)

37(1)

43(1)

-8(1)

-3(1)

3(1)

C(1)

49(2)

48(2)

75(2)

-25(2)

-4(2)

0(2)

C(2)

38(2)

39(2)

53(2)

-21(2)

-1(2)

5(1)

C(3)

36(2)

51(2)

62(2)

-21(2)

1(2)

4(1)

C(4)

27(1)

36(2)

40(2)

-11(1)

-4(1)

3(1)

C(5)

28(1)

34(1)

39(2)

-7(1)

-2(1)

0(1)

C(6)

36(2)

48(2)

70(2)

-26(2)

10(1)

-3(1)
132

C(7)

27(1)

46(2)

67(2)

-18(2)

1(1)

-2(1)

C(8)

35(1)

29(1)

30(1)

-2(1)

3(1)

4(1)

C(9)

43(2)

24(1)

41(2)

-2(1)

0(1)

-1(1)

C(10)

51(2)

37(2)

49(2)

-11(2)

10(2)

-1(1)

C(11)

40(1)

39(2)

43(2)

1(1)

10(1)

4(1)

C(12)

31(1)

32(1)

31(1)

-4(1)

-1(1)

5(1)

C(13)

28(1)

39(2)

39(2)

-10(1)

-1(1)

2(1)

C(14)

30(2)

61(2)

65(2)

-23(2)

8(1)

2(1)

C(15)

33(2)

62(2)

73(2)

-31(2)

6(2)

-5(2)

C(16)

32(2)

42(2)

51(2)

-16(2)

-3(1)

-2(1)

C(17)

41(2)

53(2)

75(2)

-29(2)

-2(2)

-3(2)

C(18)

39(2)

39(2)

49(2)

-12(2)

-2(2)

6(1)

C(19)

74(2)

63(2)

45(2)

-16(2)

-3(2)

3(2)

C(20)

59(2)

55(2)

42(2)

2(2)

8(2)

-3(2)

C(21)

85(2)

48(2)

47(2)

-10(2)

-27(2)

-3(2)

C(22)

50(2)

38(2)

64(2)

-13(2)

5(2)

3(2)

C(23)

41(2)

28(2)

47(2)

-4(1)

-5(2)

0(1)

C(24)

45(2)

36(2)

45(2)

-4(2)

3(1)

-4(1)

C(25)

38(2)

29(1)

34(1)

-1(1)

-5(1)

-1(1)

C(26)

37(1)

30(1)

37(2)

-4(1)

-3(1)

2(1)

C(27)

39(2)

51(2)

65(2)

-21(2)

12(1)

-7(1)

C(28)

47(2)

54(2)

55(2)

-20(2)

5(2)

2(2)

C(29)

45(2)

37(2)

40(2)

-8(2)

-1(1)

-1(2)

C(30)

67(2)

46(2)

52(2)

-16(2)

6(2)

-5(2)

C(31)

71(2)

57(2)

62(2)

-17(2)

5(2)

-20(2)

C(32)

57(2)

52(2)

70(2)

-18(2)

4(2)

-19(2)

C(33)

41(2)

34(2)

42(2)

-5(1)

-1(1)

1(1)

C(34)

38(2)

36(2)

39(2)

-5(1)

1(1)

-2(1)

C(35)

39(2)

43(2)

64(2)

-11(2)

10(2)

-1(1)

C(36)

47(2)

43(2)

59(2)

-13(2)

10(2)

2(1)

C(37)

43(2)

27(1)

38(2)

-2(1)

1(1)

4(1)

C(38)

52(2)

39(2)

40(2)

-6(2)

-1(2)

-1(1)

C(39)

55(2)

28(2)

37(2)

-6(1)

-11(2)

2(1)

133

C(40)

66(2)

36(2)

52(2)

-1(2)

-11(2)

5(1)

C(41)

78(2)

50(2)

69(2)

-11(2)

-9(2)

11(2)

C(42)

104(3)

100(3)

46(2)

-17(2)

-1(2)

-35(2)

Table 8.5 Hydrogen coordinates ( x 104) and isotropic displacement parameters (2 x


103) for polymorph 1 of stanozolol.
Atom

U(eq)

H(1O1)

8581

7945

9364

71

H(2O2)

8809

1526

8447

121

H(1N1)

8954

3172

6204

70

H(4)

10002

6179

10869

62

H(1)

10868

3879

6695

75

H(3A)

9789

5004

7259

64

H(3B)

9219

4585

7764

64

H(5)

7652

5310

8319

44

H(6A)

8962

6254

7618

66

H(6B)

10159

5739

7899

66

H(7A)

9677

6172

8779

61

H(7B)

10420

6695

8385

61

H(10A)

5286

7707

9103

59

H(10B)

5301

7246

9611

59

H(11A)

3692

6579

9093

53

H(11B)

3933

7000

8559

53

H(12)

6394

6098

8967

40

H(13)

5308

6209

7846

46

H(14A)

3034

5732

8383

68

H(14B)

4462

5262

8627

68

H(15A)

2837

4754

7926

73

H(15B)

3266

5286

7501

73

H(16)

5858

4451

7943

54

H(17A)

4219

3942

7277

73

H(17B)

4350

4499

6858

73

H(19A)

7680

5820

6903

79
134

H(19B)

5573

5745

7001

79

H(19C)

6641

5251

6650

79

H(20A)

7069

7049

7764

67

H(20B)

8489

7506

8031

67

H(20C)

6418

7551

8193

67

H(21A)

8321

7060

9956

78

H(21B)

9768

6756

9559

78

H(21C)

7881

6430

9659

78

H(22)

13734

5784

9815

65

H(24A)

12114

4631

9469

55

H(24B)

10598

5014

9160

55

H(26)

8470

4207

8942

45

H(27A)

11431

3884

8828

67

H(27B)

11192

3354

9269

67

H(28A)

11066

2904

8393

68

H(28B)

9549

3372

8199

68

H(31A)

4795

2114

8262

82

H(31B)

5799

1698

8706

82

H(32A)

4188

2788

8934

77

H(32B)

5415

2415

9358

77

H(33)

6548

3340

8604

50

H(34)

7724

3255

9719

49

H(35A)

5254

4125

9250

63

H(35B)

4714

3618

9689

63

H(36A)

6413

4106

10373

64

H(36B)

5083

4598

10114

64

H(37)

7414

5011

9579

47

H(38A)

7161

5510

10405

57

H(38B)

8149

4976

10733

57

H(40A)

11351

3798

10106

66

H(40B)

9387

3741

10362

66

H(40C)

10618

4313

10510

66

H(41A)

9671

2520

9489

85

135

H(41B)

10346

2050

9035

85

H(41C)

8389

1979

9293

85

H(42A)

6671

2311

7471

108

H(42B)

8532

2660

7550

108

H(42C)

6710

2963

7760

108

136

2) Polymorph 2 of stanozolol.

Table 8.6 Crystal data and structure refinement for polymorph 2 of stanozolol.
Identification code

stanozolol_2

Empirical formula

C21 H32 N2 O

Formula weight

328.49

Temperature

298(2) K

Wavelength

0.7107

Crystal system

Orthorhombic

Space group

P21212

Unit cell dimensions

a = 19.4540(7)
b = 18.7009(8)
c = 10.8348(4)

Volume

3941.8(3) 3

Density (calculated)

1.107 Mg/m3

137

Absorption coefficient

0.068 mm-1

F(000)

1440

Crystal size

0.40 x 0.30 x 0.25 mm

Theta range for data collection

3.0117 to 29.2370

Index ranges

-15<=h<=24; -14<=k<=25; -13<=l<=7

Reflections collected

12685

Independent reflections

6908 [Rint = 0.0185]

Reflections observed (>2)

5298

Data Completeness

0.997

Absorption correction

Semi-empirical from equivalents

Max. and min. transmission

1.00000 and 0.98866

Refinement method

Full-matrix least-squares on F2

Data / restraints / parameters

6908 / 2 / 447

Goodness-of-fit on F2

1.026

Final R indices [I>2(I)]

R1 = 0.0487 wR2 = 0.1023

R indices (all data)

R1 = 0.0718 wR2 = 0.1138

Absolute structure parameter

1.2(17)

Largest diff. peak and hole

0.189 and -0.157 e.-3

Table 8.7 Atomic coordinates ( x 104) and equivalent isotropic displacement


parameters (2 x 103) for polymorph 2 of stanozolol. U(eq) is defined as one third of
the trace of the orthogonalized Uij tensor.
Atom

U(eq)

O(1)

7216(1)

3487(1)

9450(2)

53(1)

O(2)

11695(1)

7432(1)

-294(2)

62(1)

N(1)

8099(1)

6189(1)

127(2)

59(1)

N(2)

7442(1)

6304(1)

434(2)

59(1)

N(3)

8648(1)

7920(1)

8686(2)

55(1)

N(4)

8680(1)

7214(1)

8432(2)

54(1)

C(1)

8363(2)

5739(2)

963(3)

59(1)

C(2)

7867(1)

5561(1)

1829(2)

49(1)

C(3)

7867(1)

5101(2)

2965(2)

51(1)

C(4)

7294(1)

5320(1)

3870(2)

38(1)

138

C(5)

7200(1)

4729(1)

4864(2)

38(1)

C(6)

7839(1)

4572(2)

5647(2)

51(1)

C(7)

7733(1)

3983(2)

6610(2)

48(1)

C(8)

7124(1)

4139(1)

7454(2)

38(1)

C(9)

6857(1)

3520(2)

8288(2)

47(1)

C(10)

6104(1)

3743(2)

8527(3)

80(1)

C(11)

5889(1)

4260(2)

7496(3)

79(1)

C(12)

6499(1)

4255(2)

6611(2)

45(1)

C(13)

6572(1)

4865(1)

5699(2)

42(1)

C(14)

5924(1)

4938(2)

4938(3)

69(1)

C(15)

5993(1)

5501(2)

3937(3)

60(1)

C(16)

6616(1)

5375(1)

3122(2)

45(1)

C(17)

6629(1)

5947(2)

2114(3)

58(1)

C(18)

7293(1)

5931(1)

1444(2)

50(1)

C(19)

7478(1)

6046(1)

4452(3)

56(1)

C(20)

7282(2)

4791(2)

8255(3)

62(1)

C(21)

6902(2)

2783(2)

7707(3)

73(1)

C(22)

8995(1)

8265(2)

7808(2)

52(1)

C(23)

9249(1)

7782(1)

6959(2)

40(1)

C(24)

9655(1)

7876(1)

5783(2)

43(1)

C(25)

9957(1)

7168(1)

5309(2)

35(1)

C(26)

10144(1)

7256(1)

3921(2)

35(1)

C(27)

10695(1)

7827(1)

3675(2)

46(1)

C(28)

10843(1)

7935(1)

2297(2)

45(1)

C(29)

11029(1)

7236(1)

1660(2)

37(1)

C(30)

11041(1)

7231(1)

212(2)

47(1)

C(31)

10901(2)

6438(2)

-112(3)

65(1)

C(32)

10607(2)

6078(2)

1049(2)

58(1)

C(33)

10447(1)

6701(1)

1907(2)

40(1)

C(34)

10318(1)

6549(1)

3268(2)

39(1)

C(35)

9735(2)

6011(1)

3431(2)

54(1)

C(36)

9594(2)

5882(1)

4800(3)

56(1)

C(37)

9396(1)

6581(1)

5433(2)

40(1)

139

C(38)

9181(1)

6439(1)

6768(2)

50(1)

C(39)

9041(1)

7129(1)

7393(2)

43(1)

C(40)

10594(1)

6974(2)

6077(2)

56(1)

C(41)

11728(1)

6966(2)

2137(3)

58(1)

C(42)

10520(2)

7730(2)

-362(2)

64(1)

Table 8.8 Bond lengths [] and angles [] for polymorph 2 of stanozolol.


Bond lengths []
O(1)-C(9)

1.440(3)

O(2)-C(30)

1.436(3)

N(1)-C(1)

1.338(3)

N(1)-N(2)

1.339(3)

N(2)-C(18)

1.330(3)

N(3)-C(22)

1.334(3)

N(3)-N(4)

1.350(3)

N(4)-C(39)

1.336(3)

C(1)-C(2)

1.387(4)

C(2)-C(18)

1.379(4)

C(2)-C(3)

1.501(3)

C(3)-C(4)

1.541(3)

C(4)-C(19)

1.540(4)

C(4)-C(16)

1.552(3)

C(4)-C(5)

1.554(3)

C(5)-C(6)

1.533(3)

C(5)-C(13)

1.540(3

C(6)-C(7)

1.532(3)

C(7)-C(8)

1.525(3)

C(8)-C(20)

1.528(4)

C(8)-C(12)

1.535(3

C(8)-C(9)

1.558(3)

C(9)-C(21)

1.517(4)

C(9)-C(10)

1.546(4)

C(10)-C(11)

1.535(4)

C(11)-C(12)

1.525(3)

C(12)-C(13)

1.516(3)

C(13)-C(14)

1.513(3)

C(14)-C(15)

1.518(4)

C(15)-C(16)

1.517(4)

C(16)-C(17)

1.529(3)

C(17)-C(18)

1.482(4)

C(22)-C(23)

1.380(3)

C(23)-C(39)

1.370(3)

C(23)-C(24)

1.510(3)

C(24)-C(25)

1.537(3)

C(25)-C(40)

1.536(3)

C(25)-C(37)

1.555(3)

C(25)-C(26)

1.556(3)

C(26)-C(27)

1.537(3)

C(26)-C(34)

1.538(3)

C(27)-C(28)

1.534(3)

C(28)-C(29)

1.522(3)

C(29)-C(33)

1.534(3)

C(29)-C(41)

1.540(3)

C(29)-C(30)

1.570(3)

C(30)-C(42)

1.512(4)

C(30)-C(31)

1.548(4)

C(31)-C(32)

1.537(4)

C(32)-C(33)

1.523(3)

140

C(33)-C(34)

1.523(3)

C(34)-C(35)

1.527(3)

C(35)-C(36)

1.527(4)

C(36)-C(37)

1.525(3)

C(37)-C(38)

1.529(3)

C(38)-C(39)

1.483(3)

Bond angles []
C(1)-N(1)-N(2)

107.5(2)

C(18)-N(2)-N(1)

109.1(2)

C(22)-N(3)-N(4)

107.7(2)

C(39)-N(4)-N(3)

108.2(2)

N(1)-C(1)-C(2)

110.0(3)

C(18)-C(2)-C(1)

103.8(2)

C(18)-C(2)-C(3)

122.4(2)

C(1)-C(2)-C(3)

133.8(3)

C(2)-C(3)-C(4)

111.7(2)

C(19)-C(4)-C(3)

109.0(2)

C(19)-C(4)-C(16)

110.7(2)

C(3)-C(4)-C(16)

107.5(2)

C(19)-C(4)-C(5)

111.8(2)

C(3)-C(4)-C(5)

109.74(19)

C(16)-C(4)-C(5)

108.03(19)

C(6)-C(5)-C(13)

110.42(19)

C(6)-C(5)-C(4)

115.10(19)

C(13)-C(5)-C(4)

112.54(19)

C(7)-C(6)-C(5)

113.9(2)

C(8)-C(7)-C(6)

112.0(2)

C(7)-C(8)-C(20)

109.7(2)

C(7)-C(8)-C(12)

106.62(19)

C(20)-C(8)-C(12)

112.6(2)

C(7)-C(8)-C(9)

117.7(2)

C(20)-C(8)-C(9)

109.3(2)

C(12)-C(8)-C(9)

100.76(18)

O(1)-C(9)-C(21)

107.3(2)

O(1)-C(9)-C(10)

108.9(2)

C(21)-C(9)-C(10)

111.7(3)

O(1)-C(9)-C(8)

112.2(2)

C(21)-C(9)-C(8)

114.5(2)

C(10)-C(9)-C(8)

102.2(2)

C(11)-C(10)-C(9)

107.8(2)

C(12)-C(11)-C(10)

104.0(2)

C(13)-C(12)-C(11)

118.6(2)

C(13)-C(12)-C(8)

114.76(19)

C(11)-C(12)-C(8)

104.1(2)

C(14)-C(13)-C(12)

110.2(2)

C(14)-C(13)-C(5)

110.8(2)

C(12)-C(13)-C(5)

109.51(19)

C(13)-C(14)-C(15)

112.3(2)

C(16)-C(15)-C(14)

112.2(2)

C(15)-C(16)-C(17)

108.7(2)

C(15)-C(16)-C(4)

112.7(2)

C(17)-C(16)-C(4)

113.9(2)

C(18)-C(17)-C(16)

110.5(2)

N(2)-C(18)-C(2)

109.7(2)

N(2)-C(18)-C(17)

125.6(3)

C(2)-C(18)-C(17)

124.6(2)

N(3)-C(22)-C(23)

109.8(2)

C(39)-C(23)-C(22)

104.4(2)

C(39)-C(23)-C(24)

123.2(2)

C(22)-C(23)-C(24)

132.4(2)

C(23)-C(24)-C(25)

112.5(2)

C(40)-C(25)-C(24)

109.4(2)

C(40)-C(25)-C(37)

110.7(2)

141

C(24)-C(25)-C(37)

108.09(18)

C(40)-C(25)-C(26)

111.15(19)

C(24)-C(25)-C(26)

108.74(19)

C(37)-C(25)-C(26)

108.75(18)

C(27)-C(26)-C(34)

111.31(18)

C(27)-C(26)-C(25)

113.76(19)

C(34)-C(26)-C(25)

113.92(19)

C(28)-C(27)-C(26)

113.0(2)

C(29)-C(28)-C(27)

111.8(2)

C(28)-C(29)-C(33)

107.79(18)

C(28)-C(29)-C(41)

109.9(2)

C(33)-C(29)-C(41)

112.3(2)

C(28)-C(29)-C(30)

117.5(2)

C(33)-C(29)-C(30)

100.43(19)

C(41)-C(29)-C(30)

108.7(2)

O(2)-C(30)-C(42)

106.0(2)

O(2)-C(30)-C(31)

108.7(2)

C(42)-C(30)-C(31)

112.4(2)

O(2)-C(30)-C(29)

113.2(2)

C(42)-C(30)-C(29)

113.4(2)

C(31)-C(30)-C(29)

103.3(2)

C(32)-C(31)-C(30)

107.4(2)

C(33)-C(32)-C(31)

103.9(2)

C(34)-C(33)-C(32)

118.7(2)

C(34)-C(33)-C(29)

114.3(2)

C(32)-C(33)-C(29)

104.00(19)

C(33)-C(34)-C(35)

111.0(2)

C(33)-C(34)-C(26)

108.70(19)

C(35)-C(34)-C(26)

110.40(19)

C(36)-C(35)-C(34)

110.5(2)

C(37)-C(36)-C(35)

110.3(2)

C(36)-C(37)-C(38)

110.3(2)

C(36)-C(37)-C(25)

112.93(19)

C(38)-C(37)-C(25)

113.4(2)

C(39)-C(38)-C(37)

109.4(2)

N(4)-C(39)-C(23)

109.8(2)

N(4)-C(39)-C(38)

125.8(2)

C(23)-C(39)-C(38)

124.4(2)

Table 8.9 Anisotropic displacement parameters (2 x 103) for polymorph 2 of


stanozolol. The anisotropic displacement factor exponent takes the form: -2 2 [h2 a*2
U11 + ... + 2 h k a* b* U12].
Atom

U11

U22

U33

U23

U13

U12

O(1)

50(1)

73(1)

36(1)

17(1)

2(1)

-2(1)

O(2)

52(1)

77(1)

57(1)

9(1)

25(1)

4(1)

N(1)

83(2)

54(2)

40(1)

3(1)

13(1)

-2(1)

N(2)

90(2)

48(1)

40(1)

9(1)

5(1)

-1(1)

N(3)

60(1)

60(2)

45(1)

-2(1)

13(1)

5(1)

N(4)

61(1)

61(2)

40(1)

8(1)

19(1)

-3(1)

C(1)

67(2)

64(2)

46(2)

6(2)

14(1)

6(2)

C(2)

62(2)

45(2)

41(2)

5(1)

13(1)

5(1)

C(3)

54(2)

55(2)

46(2)

12(1)

14(1)

10(1)

142

C(4)

38(1)

37(1)

39(1)

5(1)

6(1)

2(1)

C(5)

36(1)

38(1)

40(1)

4(1)

4(1)

2(1)

C(6)

32(1)

71(2)

49(2)

18(2)

8(1)

5(1)

C(7)

35(1)

62(2)

46(1)

19(1)

4(1)

10(1)

C(8)

32(1)

44(1)

37(1)

7(1)

3(1)

-1(1)

C(9)

37(1)

60(2)

43(2)

16(1)

-2(1)

-6(1)

C(10)

38(2)

122(3)

79(2)

52(2)

9(2)

-1(2)

C(11)

35(2)

125(3)

78(2)

60(2)

14(1)

5(2)

C(12)

29(1)

58(2)

49(2)

18(1)

4(1)

-3(1)

C(13)

32(1)

47(2)

47(2)

14(1)

7(1)

3(1)

C(14)

34(1)

97(2)

75(2)

48(2)

0(1)

4(1)

C(15)

40(1)

76(2)

64(2)

32(2)

2(1)

9(1)

C(16)

48(1)

43(1)

45(1)

11(1)

-1(1)

0(1)

C(17)

59(2)

58(2)

57(2)

21(2)

2(1)

6(2)

C(18)

66(2)

42(2)

42(2)

8(1)

9(1)

0(1)

C(19)

66(2)

45(2)

56(2)

6(1)

9(1)

-9(1)

C(20)

76(2)

57(2)

53(2)

4(2)

-2(2)

-4(2)

C(21)

98(2)

56(2)

66(2)

25(2)

-28(2)

-21(2)

C(22)

64(2)

51(2)

40(2)

-4(1)

12(1)

3(1)

C(23)

46(1)

44(2)

31(1)

-1(1)

8(1)

2(1)

C(24)

56(2)

37(1)

36(1)

-4(1)

13(1)

-6(1)

C(25)

41(1)

36(1)

28(1)

2(1)

3(1)

1(1)

C(26)

36(1)

36(1)

32(1)

1(1)

6(1)

1(1)

C(27)

53(2)

47(2)

37(1)

-8(1)

8(1)

-11(1)

C(28)

50(1)

42(1)

42(1)

1(1)

12(1)

-7(1)

C(29)

35(1)

42(1)

35(1)

0(1)

7(1)

2(1)

C(30)

47(1)

54(2)

39(1)

-1(1)

14(1)

0(1)

C(31)

78(2)

68(2)

48(2)

-15(2)

20(2)

-9(2)

C(32)

72(2)

53(2)

49(2)

-13(1)

23(1)

-6(2)

C(33)

44(1)

39(1)

37(1)

-4(1)

9(1)

1(1)

C(34)

47(1)

35(1)

37(1)

-1(1)

8(1)

4(1)

C(35)

82(2)

33(1)

48(2)

-9(1)

24(1)

-9(1)

C(36)

78(2)

34(1)

55(2)

1(1)

25(2)

-7(1)

143

C(37)

48(1)

33(1)

39(1)

0(1)

9(1)

0(1)

C(38)

64(2)

43(2)

42(2)

6(1)

15(1)

-2(1)

C(39)

46(1)

49(2)

33(1)

1(1)

9(1)

0(1)

C(40)

53(2)

82(2)

33(1)

5(2)

0(1)

4(2)

C(41)

42(2)

74(2)

56(2)

6(2)

7(1)

6(1)

Table 8.10 Hydrogen coordinates ( x 104) and isotropic displacement parameters (2


x 103) for polymorph 2 of stanozolol.
Atom

U(eq)

H(1N2)

7160

6576

41

77

H(1N4)

8500

6877

8864

70

H(1)

8813

5571

963

77

H(3A)

8309

5142

3375

67

H(3B)

7804

4606

2729

67

H(5)

7100

4287

4412

49

H(6A)

8212

4434

5103

66

H(6B)

7976

5008

6066

66

H(7A)

7658

3531

6192

62

H(7B)

8146

3937

7105

62

H(10A)

5808

3325

8525

104

H(10B)

6064

3975

9324

104

H(11A)

5475

4095

7088

103

H(11B)

5809

4736

7821

103

H(12)

6454

3818

6117

59

H(13)

6646

5309

6159

54

H(14A)

5545

5064

5477

89

H(14B)

5818

4481

4560

89

H(15A)

5582

5498

3430

78

H(15B)

6030

5969

4318

78

H(16)

6548

4914

2711

59

H(17A)

6256

5864

1538

75

H(17B)

6563

6415

2482

75

H(19A)

7563

6389

3811

72

144

H(19B)

7883

5995

4951

72

H(19C)

7103

6207

4956

72

H(20A)

7361

5198

7736

81

H(20B)

7684

4698

8742

81

H(20C)

6899

4884

8791

81

H(21A)

6688

2439

8240

95

H(21B)

7376

2657

7589

95

H(21C)

6672

2787

6924

95

H(22)

9057

8758

7773

68

H(24A)

10025

8212

5928

56

H(24B)

9357

8077

5153

56

H(26)

9725

7432

3521

45

H(27A)

10545

8277

4028

59

H(27B)

11117

7688

4088

59

H(28A)

10440

8139

1902

58

H(28B)

11219

8271

2202

58

H(31A)

10574

6406

-786

84

H(31B)

11323

6204

-362

84

H(32A)

10194

5809

857

76

H(32B)

10942

5758

1418

76

H(33)

10026

6923

1590

52

H(34)

10738

6351

3632

51

H(35A)

9322

6192

3037

70

H(35B)

9857

5563

3038

70

H(36A)

9224

5538

4891

72

H(36B)

10002

5686

5189

72

H(37)

8988

6760

5004

52

H(38A)

8772

6143

6782

65

H(38B)

9545

6187

7198

65

H(40A)

10461

6894

6919

73

H(40B)

10920

7359

6041

73

H(40C)

10800

6548

5751

73

H(41A)

11691

6849

2997

75

145

H(41B)

12068

7332

2028

75

H(41C)

11861

6547

1682

75

H(42A)

10547

7698

-1244

83

H(42B)

10615

8212

-107

83

H(42C)

10067

7598

-96

83

H(1O1)

6960(20)

3290(20)

10050(30)

160(20)

H(1O2)

12084(14)

7210(20)

-140(50)

180(20)

146

3) Stanozolol ethanol solvate.

Table 8.11 Crystal data and structure refinement for stanozolol ethanol solvate.
Identification code

stanozolol_3

Empirical formula

C23 H38 N2 O2

Formula weight

374.55

Temperature

150(2) K

Wavelength

0.7107

Crystal system

Orthorhombic

Space group

P212121

Unit cell dimensions

a = 7.1392(5)
b = 10.9541(8)
c = 26.8891(16)

Volume

2102.8(3) 3

Density (calculated)

1.183 Mg/m3

Absorption coefficient

0.075 mm-1

F(000)

824

Crystal size

0.80 x 0.35 x 0.15 mm

Theta range for data collection

2.9306 to 28.8699

Index ranges

-9<=h<=4; -13<=k<=11; -35<=l<=33

Reflections collected

6211

Independent reflections

3627 [Rint = 0.0460]


147

Reflections observed (>2)

2219

Data Completeness

0.999

Absorption correction

Semi-empirical from equivalents

Max. and min. transmission

1.00000 and 0.92877

Refinement method

Full-matrix least-squares on F2

Data / restraints / parameters

3627 / 3 / 260

Goodness-of-fit on F2

0.892

Final R indices [I>2(I)]

R1 = 0.0550 wR2 = 0.0705

R indices (all data)

R1 = 0.0993 wR2 = 0.0894

Absolute structure parameter

0(2)

Largest diff. peak and hole

0.198 and -0.182 e.-3

Table 8.12 Atomic coordinates ( x 104) and equivalent isotropic displacement


parameters (2 x 103) for stanozolol ethanol solvate. U(eq) is defined as one third of
the trace of the orthogonalized Uij tensor.
Atom

U(eq)

O(1)

5486(4)

-475(3)

12128(1)

24(1)

O(2)

4027(4)

6468(3)

7702(1)

43(1)

N(1)

1641(5)

290(3)

8015(1)

25(1)

N(2)

3466(4)

642(3)

8029(1)

22(1)

C(1)

1005(5)

-43(3)

8468(1)

27(1)

C(2)

2462(5)

120(3)

8803(1)

22(1)

C(3)

2586(5)

-40(3)

9360(1)

22(1)

C(4)

4636(5)

-91(3)

9543(1)

17(1)

C(5)

4665(5)

184(3)

10113(1)

18(1)

C(6)

3502(5)

-707(3)

10431(1)

30(1)

C(7)

3445(5)

-335(4)

10983(1)

27(1)

C(8)

5428(5)

-218(3)

11196(1)

18(1)

C(9)

5640(5)

392(3)

11723(1)

22(1)

C(10)

7613(6)

981(3)

11708(1)

28(1)

C(11)

8318(5)

922(3)

11166(1)

28(1)

C(12)

6509(5)

684(3)

10872(1)

18(1)

C(13)

6664(5)

327(3)

10323(1)

17(1)

148

C(14)

7762(5)

1290(3)

10037(1)

29(1)

C(15)

7749(5)

1054(4)

9477(1)

28(1)

C(16)

5760(5)

932(3)

9279(1)

20(1)

C(17)

5830(5)

813(3)

8709(1)

24(1)

C(18)

3938(5)

542(3)

8516(1)

19(1)

C(19)

5429(6)

-1368(3)

9423(1)

27(1)

C(20)

6366(6)

-1496(3)

11217(1)

28(1)

C(21)

4113(6)

1337(3)

11833(1)

42(1)

C(22)

4545(6)

7712(3)

7754(1)

31(1)

C(23)

6506(6)

7853(3)

7953(1)

37(1)

Table 8.13 Bond lengths [] and angles [] for stanozolol ethanol solvate.
Bond lengths []
O(1)-C(9)

1.450(4)

O(2)-C(22)

1.419(4)

N(1)-C(1)

1.352(4)

N(1)-N(2)

1.359(4)

N(2)-C(18)

1.354(4

C(1)-C(2)

1.387(5)

C(2)-C(18)

1.386(5

C(2)-C(3)

1.511(4)

C(3)-C(4)

1.545(5)

C(4)-C(19)

1.543(4)

C(4)-C(16)

1.551(4

C(4)-C(5)

1.562(4)

C(5)-C(6)

1.541(4)

C(5)-C(13)

1.543(5)

C(6)-C(7)

1.539(4)

C(7)-C(8)

1.533(5)

C(8)-C(12)

1.527(4)

C(8)-C(20)

1.552(4)

C(8)-C(9)

1.573(4)

C(9)-C(21)

1.532(5)

C(9)-C(10)

1.550(5)

C(10)-C(11)

1.542(4)

C(11)-C(12)

1.536(5)

C(12)-C(13)

1.532(4)

C(13)-C(14)

1.523(4)

C(14)-C(15)

1.527(4)

C(15)-C(16)

1.522(5)

C(16)-C(17)

1.539(4)

C(17)-C(18)

1.478(5)

C(22)-C(23)

1.507(5)

Bond angles []
C(1)-N(1)-N(2)

111.8(3)

C(18)-N(2)-N(1)

104.1(3)

N(1)-C(1)-C(2)

107.4(3)

C(18)-C(2)-C(1)

104.6(3)

C(18)-C(2)-C(3)

123.2(3)

C(1)-C(2)-C(3)

132.2(4)
149

C(2)-C(3)-C(4)

112.1(3)

C(19)-C(4)-C(3)

108.3(3)

C(19)-C(4)-C(16)

111.7(3)

C(3)-C(4)-C(16)

108.5(3)

C(19)-C(4)-C(5)

112.1(3)

C(3)-C(4)-C(5)

108.6(3)

C(16)-C(4)-C(5)

107.6(3)

C(6)-C(5)-C(13)

111.1(3)

C(6)-C(5)-C(4)

114.5(3)

C(13)-C(5)-C(4)

113.0(3)

C(7)-C(6)-C(5)

112.5(3)

C(8)-C(7)-C(6)

111.0(3)

C(12)-C(8)-C(7)

107.9(3)

C(12)-C(8)-C(20)

112.7(3)

C(7)-C(8)-C(20)

109.6(3)

C(12)-C(8)-C(9)

100.9(3)

C(7)-C(8)-C(9)

117.4(3)

C(20)-C(8)-C(9)

108.1(3)

O(1)-C(9)-C(21)

104.1(3)

O(1)-C(9)-C(10)

111.2(3)

C(21)-C(9)-C(10)

111.7(3)

O(1)-C(9)-C(8)

113.0(3)

C(21)-C(9)-C(8)

113.1(3)

C(10)-C(9)-C(8)

103.9(3)

C(11)-C(10)-C(9)

107.7(3)

C(12)-C(11)-C(10)

102.6(3)

C(8)-C(12)-C(13)

114.9(3)

C(8)-C(12)-C(11)

104.0(3)

C(13)-C(12)-C(11)

118.6(3)

C(14)-C(13)-C(12)

110.3(3)

C(14)-C(13)-C(5)

111.2(3)

C(12)-C(13)-C(5)

108.2(3)

C(13)-C(14)-C(15)

112.2(3)

C(16)-C(15)-C(14)

111.4(3)

C(15)-C(16)-C(17)

109.0(3)

C(15)-C(16)-C(4)

112.7(3)

C(17)-C(16)-C(4)

114.3(3)

C(18)-C(17)-C(16)

109.8(3)

N(2)-C(18)-C(2)

112.0(3)

N(2)-C(18)-C(17)

123.5(3)

C(2)-C(18)-C(17)

124.4(3)

O(2)-C(22)-C(23)

112.1(3)

Table 8.14 Anisotropic displacement parameters (2 x 103) for stanozolol ethanol


solvate. The anisotropic displacement factor exponent takes the form: -2 2 [h2 a*2
U11 + ... + 2 h k a* b* U12].
Atom

U11

U22

U33

U23

U13

U12

O(1)

27(2)

31(2)

14(1)

8(1)

1(1)

4(2)

O(2)

45(2)

32(2)

52(2)

-6(2)

26(2)

-13(2)

N(1)

27(2)

31(2)

16(2)

4(2)

-7(2)

2(2)

N(2)

24(2)

23(2)

20(2)

-1(1)

1(2)

5(2)

C(1)

18(2)

40(2)

22(2)

3(2)

0(2)

3(2)

C(2)

16(2)

23(2)

25(2)

0(2)

-2(2)

0(2)

C(3)

18(2)

30(2)

19(2)

4(2)

-1(2)

-4(2)

150

C(4)

17(2)

19(2)

15(2)

1(2)

2(2)

-2(2)

C(5)

20(2)

19(2)

15(2)

1(2)

1(2)

-2(2)

C(6)

21(2)

49(3)

21(2)

7(2)

-4(2)

-8(2)

C(7)

21(2)

46(3)

13(2)

6(2)

1(2)

-9(2)

C(8)

24(2)

19(2)

13(2)

0(2)

4(2)

-5(2)

C(9)

23(2)

30(2)

12(2)

-5(2)

1(2)

4(2)

C(10)

43(3)

21(2)

21(2)

-3(2)

-7(2)

-7(2)

C(11)

31(2)

37(2)

17(2)

3(2)

-7(2)

-17(2)

C(12)

21(2)

17(2)

15(2)

1(2)

-2(2)

0(2)

C(13)

16(2)

21(2)

15(2)

-1(2)

-2(2)

-1(2)

C(14)

27(2)

41(3)

19(2)

1(2)

-3(2)

-16(2)

C(15)

26(2)

45(3)

14(2)

1(2)

-1(2)

-12(2)

C(16)

26(2)

22(2)

12(2)

1(2)

-1(2)

-6(2)

C(17)

24(2)

29(2)

18(2)

1(2)

-5(2)

-2(2)

C(18)

25(2)

17(2)

15(2)

-4(2)

-5(2)

8(2)

C(19)

34(2)

23(2)

25(2)

-3(2)

-6(2)

5(2)

C(20)

44(3)

21(2)

19(2)

-2(2)

-4(2)

6(2)

C(21)

52(3)

51(3)

23(2)

-2(2)

-1(2)

27(3)

C(22)

35(2)

26(2)

32(2)

8(2)

6(2)

3(2)

C(23)

47(3)

36(2)

27(2)

-5(2)

-5(2)

8(3)

Table 8.15 Hydrogen coordinates ( x 104) and isotropic displacement parameters (2


x 103) for stanozolol ethanol solvate.
Atom

U(eq)

H(1O1)

6430(40)

-820(40)

12203(15)

66(17)

H(1O2)

4710(50)

6150(30)

7477(10)

34(14)

H(1N1)

1070(50)

300(40)

7728(9)

60(15)

H(1)

-215

-336

8544

35

H(3A)

1938

-804

9456

29

H(3B)

1935

648

9525

29

H(5)

4056

1000

10153

23

H(6A)

2207

-738

10300

39

H(6B)

4044

-1536

10403

39

151

H(7A)

2783

455

11017

35

H(7B)

2739

-956

11174

35

H(10A)

7547

1840

11821

37

H(10B)

8479

532

11930

37

H(11A)

8908

1701

11065

37

H(11B)

9228

249

11121

37

H(12)

5784

1465

10881

23

H(13)

7332

-473

10297

22

H(14A)

9072

1298

10157

38

H(14B)

7212

2103

10103

38

H(15A)

8387

1735

9305

36

H(15B)

8452

295

9405

36

H(16)

5107

1719

9354

26

H(17A)

6296

1583

8562

31

H(17B)

6702

149

8615

31

H(19A)

6761

-1395

9510

36

H(19B)

5282

-1534

9067

36

H(19C)

4749

-1986

9615

36

H(20A)

7652

-1413

11339

36

H(20B)

6383

-1853

10882

36

H(20C)

5654

-2027

11441

36

H(21A)

4374

1733

12152

55

H(21B)

2892

929

11849

55

H(21C)

4096

1952

11568

55

H(22A)

3656

8120

7982

40

H(22B)

4458

8119

7426

40

H(23A)

7367

7350

7757

48

H(23B)

6540

7589

8301

48

H(23C)

6885

8711

7931

48

152

4) Stanozolol isopropanol solvate.

Table 8.16 Crystal data and structure refinement for stanozolol isopropanol solvate.
Identification code

stanozolol_4

Empirical formula

C24 H40 N2 O2

Formula weight

388.58

Temperature

150(2) K

Wavelength

0.7107

Crystal system

Monoclinic

Space group

C2

Unit cell dimensions

a = 24.5445(13)
b = 7.2894(3), = 122.679(7)
c = 15.2500(8)

Volume

2296.56(19) 3

Density (calculated)

1.124 Mg/m3

Absorption coefficient

0.071 mm-1

F(000)

856

Crystal size

0.51 x 0.32 x 0.26 mm

Theta range for data collection

2.9565 to 29.1381 .

Index ranges

-24<=h<=31; -6<=k<=9; -20<=l<=20

Reflections collected

5444

Independent reflections

3446 [Rint = 0.0161]


153

Reflections observed (>2)

3029

Data Completeness

0.996

Absorption correction

Semi-empirical from equivalents

Max. and min. transmission

1.00000 and 0.99757

Refinement method

Full-matrix least-squares on F2

Data / restraints / parameters

3446 / 1 / 266

Goodness-of-fit on F2

0.980

Final R indices [I>2(I)]

R1 = 0.0318 wR2 = 0.0725

R indices (all data)

R1 = 0.0375 wR2 = 0.0739

Absolute structure parameter

1.2(11)

Largest diff. peak and hole

0.164 and -0.183 e.-3

Table 8.17 Atomic coordinates ( x 104) and equivalent isotropic displacement


parameters (2 x 103) for stanozolol isopropanol solvate. U(eq) is defined as one
third of the trace of the orthogonalized Uij tensor.
Atom

U(eq)

O(1)

10475(1)

2553(2)

13827(1)

28(1)

O(2)

5862(1)

4010(2)

3842(1)

31(1)

N(1)

6403(1)

-321(2)

5483(1)

21(1)

N(2)

6378(1)

1520(2)

5556(1)

23(1)

C(1)

6871(1)

-1086(3)

6379(1)

20(1)

C(2)

7179(1)

318(2)

7082(1)

18(1)

C(3)

7735(1)

318(2)

8208(1)

19(1)

C(4)

8009(1)

2264(2)

8588(1)

16(1)

C(5)

8407(1)

2270(2)

9804(1)

17(1)

C(6)

8983(1)

924(3)

10294(1)

25(1)

C(7)

9336(1)

841(2)

11486(1)

24(1)

C(8)

9548(1)

2737(2)

11969(1)

19(1)

C(9)

9792(1)

2927(3)

13144(1)

23(1)

C(10)

9684(1)

4976(3)

13258(1)

33(1)

C(11)

9189(1)

5711(3)

12158(1)

30(1)

C(12)

8953(1)

3992(2)

11474(1)

18(1)

C(13)

8614(1)

4195(2)

10294(1)

17(1)

154

C(14)

8030(1)

5457(3)

9857(1)

23(1)

C(15)

7649(1)

5529(2)

8671(1)

23(1)

C(16)

7435(1)

3628(2)

8197(1)

18(1)

C(17)

7019(1)

3763(2)

7001(1)

23(1)

C(18)

6854(1)

1892(2)

6538(1)

19(1)

C(19)

8433(1)

2789(2)

8169(1)

23(1)

C(20)

10072(1)

3489(3)

11805(1)

28(1)

C(21)

9434(1)

1686(3)

13469(1)

33(1)

C(22)

6961(1)

4973(3)

4466(2)

42(1)

C(23)

6342(1)

4163(3)

3581(1)

30(1)

C(24)

6449(1)

2355(3)

3227(2)

47(1)

Table 8.18 Bond lengths [] and angles [] for stanozolol isopropanol solvate.
Bond lengths []
O(1)-C(9)

1.4438(18)

O(2)-C(23)

1.438(2)

N(1)-C(1)

1.343(2)

N(1)-N(2)

1.351(2)

N(2)-C(18)

1.3386(

C(1)-C(2)

1.376(2)

C(2)-C(18)

1.388(2

C(2)-C(3)

1.510(2)

C(3)-C(4)

1.542(2)

C(4)-C(19)

1.533(2)

C(4)-C(16)

1.556(2)

C(4)-C(5)

1.5602(19)

C(5)-C(13)

1.542(2

C(5)-C(6)

1.542(2)

C(6)-C(7)

1.536(2)

C(7)-C(8)

1.520(2)

C(8)-C(12)

1.533(2)

C(8)-C(20)

1.538(2)

C(8)-C(9)

1.559(2)

C(9)-C(21)

1.517(3)

C(9)-C(10)

1.543(3)

C(10)-C(11)

1.542(2)

C(11)-C(12)

1.530(2)

C(12)-C(13)

1.527(2)

C(13)-C(14)

1.522(2)

C(14)-C(15)

1.523(2)

C(15)-C(16)

1.520(2)

C(16)-C(17)

1.539(2)

C(17)-C(18)

1.488(2)

C(22)-C(23)

1.504(2)

C(23)-C(24)

1.499(3)

Bond angles []
C(1)-N(1)-N(2)

112.39(15)

C(18)-N(2)-N(1)

104.02(13)
155

N(1)-C(1)-C(2)

106.99(16)

C(1)-C(2)-C(18)

104.63(13)

C(1)-C(2)-C(3)

131.72(15)

C(18)-C(2)-C(3)

123.64(14)

C(2)-C(3)-C(4)

111.76(13)

C(19)-C(4)-C(3)

109.27(13)

C(19)-C(4)-C(16)

110.93(13)

C(3)-C(4)-C(16)

108.76(12)

C(19)-C(4)-C(5)

111.37(12)

C(3)-C(4)-C(5)

108.37(13)

C(16)-C(4)-C(5)

108.07(12)

C(13)-C(5)-C(6)

111.57(12)

C(13)-C(5)-C(4)

114.22(13)

C(6)-C(5)-C(4)

113.33(13)

C(7)-C(6)-C(5)

112.49(14)

C(8)-C(7)-C(6)

111.38(14)

C(7)-C(8)-C(12)

108.52(12)

C(7)-C(8)-C(20)

110.08(14)

C(12)-C(8)-C(20)

111.44(14)

C(7)-C(8)-C(9)

117.13(14)

C(12)-C(8)-C(9)

100.73(12)

C(20)-C(8)-C(9)

108.62(12)

O(1)-C(9)-C(21)

107.67(14)

O(1)-C(9)-C(10)

107.76(14)

C(21)-C(9)-C(10)

112.08(16)

O(1)-C(9)-C(8)

112.79(13)

C(21)-C(9)-C(8)

113.05(13)

C(10)-C(9)-C(8)

103.41(14)

C(11)-C(10)-C(9)

107.27(14)

C(12)-C(11)-C(10)

104.08(15)

C(13)-C(12)-C(11)

119.28(15)

C(13)-C(12)-C(8)

113.90(12)

C(11)-C(12)-C(8)

104.08(12)

C(14)-C(13)-C(12)

111.02(13)

C(14)-C(13)-C(5)

110.57(12)

C(12)-C(13)-C(5)

108.12(13)

C(13)-C(14)-C(15)

111.73(13)

C(16)-C(15)-C(14)

111.50(14)

C(15)-C(16)-C(17)

110.10(13)

C(15)-C(16)-C(4)

113.05(12)

C(17)-C(16)-C(4)

112.36(13)

C(18)-C(17)-C(16)

109.87(14)

N(2)-C(18)-C(2)

111.97(14)

N(2)-C(18)-C(17)

124.44(14)

C(2)-C(18)-C(17)

123.60(13)

O(2)-C(23)-C(24)

111.09(16)

O(2)-C(23)-C(22)

111.34(15)

C(24)-C(23)-C(22)

112.35(16)

Table 8.19 Anisotropic displacement parameters (2 x 103) for stanozolol


isopropanol solvate. The anisotropic displacement factor exponent takes the form: -2
2 [h2 a*2 U11 + ... + 2 h k a* b* U12].
Atom

U11

U22

U33

U23

U13

U12

O(1)

16(1)

28(1)

22(1)

-6(1)

-1(1)

2(1)

O(2)

25(1)

34(1)

35(1)

14(1)

17(1)

7(1)

N(1)

22(1)

21(1)

14(1)

-3(1)

5(1)

-4(1)

N(2)

24(1)

22(1)

18(1)

-2(1)

7(1)

-2(1)

156

C(1)

19(1)

20(1)

17(1)

2(1)

7(1)

0(1)

C(2)

18(1)

18(1)

16(1)

-2(1)

9(1)

-3(1)

C(3)

20(1)

18(1)

15(1)

2(1)

7(1)

2(1)

C(4)

19(1)

14(1)

15(1)

0(1)

8(1)

1(1)

C(5)

17(1)

16(1)

17(1)

-1(1)

9(1)

0(1)

C(6)

26(1)

21(1)

19(1)

-5(1)

5(1)

4(1)

C(7)

24(1)

19(1)

18(1)

-2(1)

4(1)

2(1)

C(8)

15(1)

18(1)

19(1)

-4(1)

6(1)

-1(1)

C(9)

13(1)

30(1)

16(1)

-4(1)

1(1)

0(1)

C(10)

25(1)

37(1)

23(1)

-10(1)

4(1)

5(1)

C(11)

27(1)

27(1)

24(1)

-9(1)

5(1)

5(1)

C(12)

16(1)

20(1)

18(1)

-3(1)

9(1)

0(1)

C(13)

16(1)

17(1)

18(1)

-2(1)

9(1)

-2(1)

C(14)

23(1)

20(1)

21(1)

-5(1)

9(1)

1(1)

C(15)

23(1)

17(1)

22(1)

-1(1)

8(1)

5(1)

C(16)

17(1)

17(1)

17(1)

0(1)

8(1)

0(1)

C(17)

24(1)

19(1)

19(1)

1(1)

7(1)

3(1)

C(18)

18(1)

20(1)

16(1)

-1(1)

7(1)

0(1)

C(19)

24(1)

25(1)

21(1)

-3(1)

13(1)

-2(1)

C(20)

17(1)

35(1)

30(1)

2(1)

11(1)

1(1)

C(21)

25(1)

50(1)

17(1)

4(1)

7(1)

1(1)

C(22)

42(1)

49(2)

45(1)

-16(1)

31(1)

-15(1)

C(23)

31(1)

33(1)

29(1)

5(1)

18(1)

0(1)

C(24)

51(1)

47(2)

55(1)

-16(1)

36(1)

-13(1)

Table 8.20 Hydrogen coordinates ( x 104) and isotropic displacement parameters (2


x 103) for stanozolol isopropanol solvate.
Atom

U(eq)

H(1N1)

6141

-948

4913

28

H(1)

6971

-2356

6503

25

H(3A)

8083

-493

8290

25

H(3B)

7584

-178

8646

25

H(5)

8106

1799

10003

22

157

H(6A)

8823

-317

10004

33

H(6B)

9293

1306

10103

33

H(7A)

9044

301

11679

31

H(7B)

9720

38

11767

31

H(10A)

9517

5123

13716

43

H(10B)

10097

5658

13567

43

H(11A)

8826

6338

12142

39

H(11B)

9395

6580

11924

39

H(12)

8633

3389

11596

24

H(13)

8927

4722

10133

22

H(14A)

8177

6708

10139

29

H(14B)

7743

5017

10084

29

H(15A)

7263

6318

8416

30

H(15B)

7922

6084

8445

30

H(16)

7151

3130

8424

23

H(17A)

6616

4448

6781

30

H(17B)

7259

4437

6749

30

H(19A)

8177

2696

7407

30

H(19B)

8804

1955

8457

30

H(19C)

8587

4051

8375

30

H(20A)

10203

4715

12114

36

H(20B)

9899

3561

11058

36

H(20C)

10448

2670

12140

36

H(21A)

9559

1995

14180

43

H(21B)

9546

404

13445

43

H(21C)

8967

1858

12992

43

H(22A)

7155

4127

5059

54

H(22B)

6868

6146

4672

54

H(22C)

7263

5173

4242

54

H(23)

6170

5031

2980

39

H(24A)

6039

1918

2624

61

H(24B)

6611

1461

3794

61

H(24C)

6767

2506

3031

61

158

H(1O2)

6009(10)

3260(30)

4353(17)

53(7)

H(1O1)

10538(10)

1470(30)

13822(16)

45(7)

159

5) Stanozolol butan-2-ol solvate.

Table 8.21 Crystal data and structure refinement for stanozolol butan-2-ol solvate.
Identification code

stanozolol_5

Empirical formula

C25 H42 N2 O2

Formula weight

402.61

Temperature

298(2) K

Wavelength

0.7107

Crystal system

Monoclinic

Space group

C2

Unit cell dimensions

a = 25.321(2)
b = 7.421(2), = 123.40
c = 15.393(2)

Volume

2414.6(7) 3

Density (calculated)

1.107 Mg/m3

Absorption coefficient

0.069 mm-1

F(000)

888

Crystal size

0.50 x 0.40 x 0.15 mm

Theta range for data collection

3.0427 to 29.1956

Index ranges

-33<=h<=34; -10<=k<=9; -20<=l<=20

Reflections collected

17882

Independent reflections

4402 [Rint = 0.0472]


160

Reflections observed (>2)

3388

Data Completeness

0.998

Absorption correction

Semi-empirical from equivalents

Max. and min. transmission

1.00000 and 0.69278

Refinement method

Full-matrix least-squares on F2

Data / restraints / parameters

4402 / 1 / 267

Goodness-of-fit on F2

1.039

Final R indices [I>2(I)]

R1 = 0.0503 wR2 = 0.1290

R indices (all data)

R1 = 0.0691 wR2 = 0.1418

Absolute structure parameter

0.7(19)

Largest diff. peak and hole

0.166 and -0.156 e.-3

Table 8.22 Atomic coordinates ( x 104) and equivalent isotropic displacement


parameters (2 x 103) for stanozolol butan-2-ol solvate. U(eq) is defined as one third
of the trace of the orthogonalized Uij tensor.
Atom

U(eq)

N(1)

8688(1)

3919(3)

14631(2)

56(1)

N(2)

8732(1)

5712(3)

14551(2)

61(1)

O(1)

4536(1)

6851(3)

6397(1)

67(1)

O(2)

4115(1)

13333(4)

6207(2)

94(1)

C(1)

8225(1)

3178(4)

13739(2)

47(1)

C(2)

7940(1)

4517(3)

13025(2)

42(1)

C(3)

7398(1)

4539(3)

11897(2)

43(1)

C(4)

7115(1)

6441(3)

11527(2)

37(1)

C(5)

6695(1)

6457(3)

10319(2)

37(1)

C(6)

6148(1)

5092(3)

9849(2)

52(1)

C(7)

5757(1)

5069(3)

8648(2)

52(1)

C(8)

5509(1)

6949(3)

8209(2)

43(1)

C(9)

5206(1)

7218(4)

7016(2)

57(1)

C(10)

5292(2)

9245(5)

6927(2)

80(1)

C(11)

5803(1)

9940(4)

8021(2)

67(1)

C(12)

6082(1)

8219(3)

8669(2)

43(1)

161

C(13)

6464(1)

8355(3)

9855(2)

39(1)

C(14)

7028(1)

9615(3)

10262(2)

50(1)

C(15)

7441(1)

9655(3)

11435(2)

51(1)

C(16)

7672(1)

7779(3)

11897(2)

41(1)

C(17)

8115(1)

7898(3)

13089(2)

58(1)

C(18)

8272(1)

6066(3)

13562(2)

47(1)

C(19)

6738(1)

6921(4)

11995(2)

53(1)

C(20)

5036(1)

7550(4)

8473(2)

61(1)

C(21)

5513(2)

6078(6)

6592(2)

89(1)

C(22)

4164(2)

11956(8)

8106(5)

145(2)

C(23)

3634(3)

11934(8)

7062(5)

135(2)

C(24)

3618(2)

13459(7)

6400(4)

119(2)

C(25)

2993(2)

13829(11)

5448(4)

142(2)

Table 8.23 Bond lengths [] and angles [] for stanozolol butan-2-ol solvate.
Bond lengths []
N(1)-C(1)

1.337(3)

N(1)-N(2)

1.346(3)

N(2)-C(18)

1.339(3

O(1)-C(9)

1.441(3)

O(2)-C(24)

1.446(5

C(1)-C(2)

1.358(3)

C(2)-C(18)

1.395(4

C(2)-C(3)

1.507(3)

C(3)-C(4)

1.544(3)

C(4)-C(19)

1.520(3)

C(4)-C(5)

1.553(3)

C(4)-C(16)

1.554(3)

C(5)-C(6)

1.539(3)

C(5)-C(13)

1.541(3)

C(6)-C(7)

1.544(4)

C(7)-C(8)

1.526(3)

C(8)-C(20)

1.529(3)

C(8)-C(12)

1.536(3)

C(8)-C(9)

1.565(3)

C(9)-C(21)

1.519(5)

C(9)-C(10)

1.536(4)

C(10)-C(11)

1.542(4)

C(11)-C(12)

1.533(3)

C(12)-C(13)

1.527(3)

C(13)-C(14)

1.523(3)

C(14)-C(15)

1.509(3)

C(15)-C(16)

1.525(3)

C(16)-C(17)

1.539(3)

C(17)-C(18)

1.489(3)

C(22)-C(23)

1.417(6)

C(23)-C(24)

1.508(7)

C(24)-C(25)

1.475(6)

162

Bond angles []
C(1)-N(1)-N(2)

112.5(2)

C(18)-N(2)-N(1)

103.6(2)

N(1)-C(1)-C(2)

107.8(2)

C(1)-C(2)-C(18)

104.2(2)

C(1)-C(2)-C(3)

133.0(2)

C(18)-C(2)-C(3)

122.9(2)

C(2)-C(3)-C(4)

112.24(18)

C(19)-C(4)-C(3)

108.96(19)

C(19)-C(4)-C(5)

111.81(18)

C(3)-C(4)-C(5)

108.77(17)

C(19)-C(4)-C(16)

110.91(19)

C(3)-C(4)-C(16)

107.74(17)

C(5)-C(4)-C(16)

108.55(17)

C(6)-C(5)-C(13)

111.75(17)

C(6)-C(5)-C(4)

113.78(18)

C(13)-C(5)-C(4)

113.38(17)

C(5)-C(6)-C(7)

112.8(2)

C(8)-C(7)-C(6)

110.9(2)

C(7)-C(8)-C(20)

109.9(2)

C(7)-C(8)-C(12)

107.64(18)

C(20)-C(8)-C(12)

112.2(2)

C(7)-C(8)-C(9)

116.9(2)

C(20)-C(8)-C(9)

108.95(19)

C(12)-C(8)-C(9)

101.06(19)

O(1)-C(9)-C(21)

107.7(2)

O(1)-C(9)-C(10)

107.4(2)

C(21)-C(9)-C(10)

112.1(3)

O(1)-C(9)-C(8)

113.0(2)

C(21)-C(9)-C(8)

113.4(2)

C(10)-C(9)-C(8)

103.1(2)

C(9)-C(10)-C(11)

107.8(2)

C(12)-C(11)-C(10)

103.9(2)

C(13)-C(12)-C(11)

119.0(2)

C(13)-C(12)-C(8)

114.12(18)

C(11)-C(12)-C(8)

103.42(17)

C(14)-C(13)-C(12)

111.51(18)

C(14)-C(13)-C(5)

109.92(18)

C(12)-C(13)-C(5)

108.83(19)

C(15)-C(14)-C(13)

112.35(19)

C(14)-C(15)-C(16)

112.0(2)

C(15)-C(16)-C(17)

110.11(19)

C(15)-C(16)-C(4)

112.03(17)

C(17)-C(16)-C(4)

113.07(19)

C(18)-C(17)-C(16)

110.7(2)

N(2)-C(18)-C(2)

112.0(2)

N(2)-C(18)-C(17)

124.5(2)

C(2)-C(18)-C(17)

123.4(2)

C(22)-C(23)-C(24)

114.5(5)

O(2)-C(24)-C(25)

112.8(4)

O(2)-C(24)-C(23)

112.8(4)

C(25)-C(24)-C(23)

115.2(5)

163

Table 8.24 Anisotropic displacement parameters (2 x 103) for stanozolol butan-2-ol


solvate. The anisotropic displacement factor exponent takes the form: -2 2 [h2 a*2
U11 + ... + 2 h k a* b* U12].
Atom

U11

U22

U33

U23

U13

U12

N(1)

56(1)

51(1)

35(1)

10(1)

8(1)

10(1)

N(2)

55(1)

52(2)

40(1)

5(1)

4(1)

-1(1)

O(1)

43(1)

58(1)

53(1)

16(1)

-3(1)

-2(1)

O(2)

90(2)

86(2)

122(2)

-36(2)

69(2)

-25(1)

C(1)

48(1)

38(1)

37(1)

2(1)

11(1)

4(1)

C(2)

42(1)

39(1)

32(1)

4(1)

13(1)

5(1)

C(3)

46(1)

31(1)

32(1)

2(1)

10(1)

1(1)

C(4)

40(1)

30(1)

30(1)

4(1)

14(1)

1(1)

C(5)

37(1)

29(1)

34(1)

5(1)

13(1)

2(1)

C(6)

53(1)

36(1)

38(1)

7(1)

7(1)

-7(1)

C(7)

48(1)

35(1)

40(1)

3(1)

5(1)

1(1)

C(8)

38(1)

36(1)

38(1)

5(1)

10(1)

0(1)

C(9)

41(1)

63(2)

39(1)

13(1)

5(1)

4(1)

C(10)

61(2)

76(2)

54(2)

30(2)

0(1)

-10(2)

C(11)

53(2)

57(2)

55(2)

24(1)

6(1)

-9(1)

C(12)

36(1)

42(1)

37(1)

14(1)

12(1)

4(1)

C(13)

38(1)

33(1)

38(1)

6(1)

16(1)

0(1)

C(14)

48(1)

37(1)

47(1)

10(1)

15(1)

-6(1)

C(15)

48(1)

33(1)

49(2)

4(1)

12(1)

-11(1)

C(16)

38(1)

33(1)

38(1)

4(1)

12(1)

-2(1)

C(17)

59(2)

42(2)

43(2)

0(1)

9(1)

-10(1)

C(18)

44(1)

43(1)

37(1)

4(1)

11(1)

1(1)

C(19)

55(1)

54(2)

43(1)

2(1)

24(1)

2(1)

C(20)

41(1)

58(2)

69(2)

2(1)

22(1)

-2(1)

C(21)

73(2)

133(3)

34(2)

-1(2)

13(2)

8(2)

C(22)

150(4)

111(4)

164(5)

-8(4)

80(5)

24(4)

C(23)

136(4)

126(4)

146(5)

-9(4)

79(4)

-8(4)

C(24)

149(4)

102(3)

150(4)

-10(3)

109(4)

-19(3)

C(25)

109(3)

211(6)

129(4)

-2(4)

81(3)

11(4)

164

Table 8.25 Hydrogen coordinates ( x 104) and isotropic displacement parameters (2


x 103) for stanozolol butan-2-ol solvate.
Atom

U(eq)

H(1N1)

8930

3317

15193

73

H(1O1)

4477

5774

6431

87

H(1O2)

3963

13454

5582

122

H(1)

8118

1963

13628

61

H(3A)

7071

3725

11802

55

H(3B)

7546

4106

11473

55

H(5)

6971

6064

10093

48

H(6A)

5871

5384

10080

67

H(6B)

6319

3897

10105

67

H(7A)

6019

4639

8411

67

H(7B)

5403

4246

8392

67

H(10A)

4896

9875

6668

104

H(10B)

5422

9449

6449

104

H(11A)

6125

10619

8004

87

H(11B)

5619

10701

8300

87

H(12)

6365

7706

8487

55

H(13)

6190

8818

10068

51

H(14A)

7278

9229

9995

65

H(14B)

6875

10823

10005

65

H(15A)

7205

10169

11700

67

H(15B)

7804

10425

11655

67

H(16)

7924

7323

11638

53

H(17A)

8501

8517

13275

75

H(17B)

7911

8589

13361

75

H(19A)

6581

8131

11803

68

H(19B)

7006

6831

12739

68

H(19C)

6388

6104

11738

68

H(20A)

5249

7676

9214

79

H(20B)

4707

6664

8228

79

165

H(20C)

4854

8685

8145

79

H(21A)

5345

6412

5883

115

H(21B)

5426

4828

6621

115

H(21C)

5962

6273

7003

115

H(22A)

4546

12021

8115

189

H(22B)

4167

10876

8452

189

H(22C)

4138

12986

8458

189

H(23A)

3252

11980

7064

176

H(23B)

3632

10802

6746

176

H(24)

3720

14540

6830

155

H(25A)

2876

12855

4964

184

H(25B)

3011

14930

5138

184

H(25C)

2684

13944

5621

184

166

6) Stanozolol ethanol dihydrate solvate.

Table 8.26 Crystal data and structure refinement for stanozolol ethanol dihydrate
solvate.
Identification code

stanozolol_6

Empirical formula

C44 H74 N4 O5

Formula weight

739.07

Temperature

150(2) K

Wavelength

0.7107

Crystal system

Monoclinic

Space group

P21

Unit cell dimensions

a = 7.3934(2)
b = 27.5812(6), = 109.234(3)
c = 10.5964(3)

Volume

2040.19(9) 3

Density (calculated)

1.203 Mg/m3

Absorption coefficient

0.078 mm-1

F(000)

812

Crystal size

0.50 x 0.30 x 0.15 mm

Theta range for data collection

2.9481 to 29.0073

Index ranges

-9<=h<=8; -34<=k<=21; -8<=l<=14

167

Reflections collected

9236

Independent reflections

5277 [Rint = 0.0197]

Reflections observed (>2)

4629

Data Completeness

0.997

Absorption correction

Semi-empirical from equivalents

Max. and min. transmission

1.00000 and 0.98656

Refinement method

Full-matrix least-squares on F2

Data / restraints / parameters

5277 / 7 / 505

Goodness-of-fit on F2

0.980

Final R indices [I>2(I)]

R1 = 0.0327 wR2 = 0.0701

R indices (all data)

R1 = 0.0379 wR2 = 0.0711

Absolute structure parameter

0.7(8)

Largest diff. peak and hole

0.174 and -0.209 e.-3

Table 8.27 Atomic coordinates ( x 104) and equivalent isotropic displacement


parameters (2 x 103) for stanozolol ethanol dihydrate solvate. U(eq) is defined as
one third of the trace of the orthogonalized Uij tensor.
Atom

U(eq)

O(1)

1709(2)

823(1)

3003(1)

26(1)

O(2)

1501(2)

4871(1)

10164(1)

22(1)

O(3)

-4186(2)

5290(1)

4847(1)

26(1)

O(4)

6696(2)

524(1)

7838(2)

30(1)

O(5)

1978(2)

309(1)

823(2)

28(1)

N(1)

-1537(2)

4830(1)

2753(2)

21(1)

N(2)

-2212(3)

4670(1)

3724(2)

22(1)

N(3)

2045(3)

829(1)

8260(2)

26(1)

N(4)

3743(3)

1023(1)

8276(2)

25(1)

C(1)

-807(3)

4468(1)

2224(2)

20(1)

C(2)

-1004(3)

4049(1)

2869(2)

18(1)

C(3)

-498(3)

3531(1)

2687(2)

18(1)

C(4)

-451(3)

3215(1)

3901(2)

16(1)

C(5)

-495(3)

2672(1)

3501(2)

17(1)

C(6)

1222(3)

2518(1)

3078(2)

27(1)

168

C(7)

1023(4)

1996(1)

2538(2)

27(1)

C(8)

738(3)

1639(1)

3559(2)

19(1)

C(9)

130(3)

1115(1)

3064(2)

23(1)

C(10)

-778(4)

928(1)

4091(2)

29(1)

C(11)

-1386(3)

1376(1)

4732(2)

27(1)

C(12)

-999(3)

1802(1)

3945(2)

19(1)

C(13)

-822(3)

2314(1)

4527(2)

17(1)

C(14)

-2598(3)

2452(1)

4871(2)

23(1)

C(15)

-2555(3)

2977(1)

5306(2)

23(1)

C(16)

-2292(3)

3324(1)

4261(2)

18(1)

C(17)

-2400(3)

3853(1)

4698(2)

23(1)

C(18)

-1881(3)

4196(1)

3783(2)

18(1)

C(19)

1361(3)

3337(1)

5062(2)

22(1)

C(20)

2566(3)

1613(1)

4775(2)

27(1)

C(21)

-1294(3)

1091(1)

1644(2)

32(1)

C(22)

1025(3)

1211(1)

8421(2)

24(1)

C(23)

2050(3)

1642(1)

8547(2)

18(1)

C(24)

1584(3)

2160(1)

8737(2)

18(1)

C(25)

3407(3)

2480(1)

9197(2)

15(1)

C(26)

2822(3)

3022(1)

8990(2)

16(1)

C(27)

1500(3)

3187(1)

9766(2)

17(1)

C(28)

816(3)

3710(1)

9453(2)

18(1)

C(29)

2511(3)

4056(1)

9721(2)

15(1)

C(30)

2067(3)

4585(1)

9219(2)

18(1)

C(31)

4017(3)

4763(1)

9149(2)

24(1)

C(32)

5160(3)

4308(1)

9011(2)

22(1)

C(33)

3755(3)

3887(1)

8895(2)

17(1)

C(34)

4521(3)

3376(1)

9213(2)

15(1)

C(35)

5737(3)

3231(1)

8347(2)

19(1)

C(36)

6354(3)

2705(1)

8555(2)

20(1)

C(37)

4672(3)

2361(1)

8320(2)

17(1)

C(38)

5381(3)

1836(1)

8465(2)

22(1)

C(39)

3771(3)

1504(1)

8429(2)

20(1)

169

C(40)

4509(3)

2371(1)

10676(2)

21(1)

C(41)

3652(3)

4071(1)

11226(2)

21(1)

C(42)

499(3)

4627(1)

7865(2)

24(1)

C(43)

-4861(3)

5007(1)

5731(2)

31(1)

C(44)

-6672(4)

4740(1)

5030(2)

40(1)

Table 8.28 Bond lengths [] and angles [] for stanozolol ethanol dihydrate solvate.
Bond lengths []
O(1)-C(9)

1.438(3)

O(2)-C(30)

1.442(2)

O(3)-C(43)

1.431(3

N(1)-C(1)

1.341(3)

N(1)-N(2)

1.357(2)

N(2)-C(18)

1.330(2)

N(3)-C(22)

1.337(3

N(3)-N(4)

1.360(2)

N(4)-C(39)

1.334(3

C(1)-C(2)

1.375(3)

C(2)-C(18)

1.391(3

C(2)-C(3)

1.505(3)

C(3)-C(4)

1.544(3)

C(4)-C(19)

1.528(3)

C(4)-C(5)

1.553(3)

C(4)-C(16)

1.559(3)

C(5)-C(6)

1.539(3)

C(5)-C(13)

1.546(3)

C(6)-C(7)

1.537(3)

C(7)-C(8)

1.529(3)

C(8)-C(20)

1.531(3)

C(8)-C(12)

1.538(3)

C(8)-C(9)

1.551(3)

C(9)-C(21)

1.527(3)

C(9)-C(10)

1.544(3)

C(10)-C(11)

1.546(3)

C(11)-C(12)

1.522(3)

C(12)-C(13)

1.529(3)

C(13)-C(14)

1.522(3)

C(14)-C(15)

1.517(3)

C(15)-C(16)

1.524(3)

C(16)-C(17)

1.539(3)

C(17)-C(18)

1.493(3)

C(22)-C(23)

1.393(3)

C(23)-C(39)

1.373(3)

C(23)-C(24)

1.498(3)

C(24)-C(25)

1.550(3)

C(25)-C(40)

1.539(3)

C(25)-C(26)

1.551(3)

C(25)-C(37)

1.555(3)

C(26)-C(27)

1.539(3)

C(26)-C(34)

1.546(3)

C(27)-C(28)

1.528(3)

C(28)-C(29)

1.526(3)

C(29)-C(33)

1.535(3)

C(29)-C(41)

1.540(3)

C(29)-C(30)

1.552(3)

C(30)-C(42)

1.523(3)

C(30)-C(31)

1.548(3)

C(31)-C(32)

1.547(3)

170

C(32)-C(33)

1.536(3)

C(33)-C(34)

1.516(3)

C(34)-C(35)

1.533(3)

C(35)-C(36)

1.514(3)

C(36)-C(37)

1.518(3)

C(37)-C(38)

1.531(3)

C(38)-C(39)

1.493(3)

C(43)-C(44)

1.494(3)

Bond angles []
C(1)-N(1)-N(2)

111.95(16)

C(18)-N(2)-N(1)

104.32(16)

C(22)-N(3)-N(4)

104.22(17)

C(39)-N(4)-N(3)

111.69(18)

N(1)-C(1)-C(2)

107.20(18)

C(1)-C(2)-C(18)

104.55(18)

C(1)-C(2)-C(3)

131.57(18)

C(18)-C(2)-C(3)

123.85(18)

C(2)-C(3)-C(4)

111.59(16)

C(19)-C(4)-C(3)

108.63(17)

C(19)-C(4)-C(5)

111.45(16)

C(3)-C(4)-C(5)

108.91(15)

C(19)-C(4)-C(16)

111.39(16)

C(3)-C(4)-C(16)

108.25(16)

C(5)-C(4)-C(16)

108.13(16)

C(6)-C(5)-C(13)

111.27(16)

C(6)-C(5)-C(4)

113.68(17)

C(13)-C(5)-C(4)

114.71(16)

C(7)-C(6)-C(5)

112.38(18)

C(8)-C(7)-C(6)

111.04(17)

C(7)-C(8)-C(20)

109.66(19)

C(7)-C(8)-C(12)

108.72(16)

C(20)-C(8)-C(12)

111.89(17)

C(7)-C(8)-C(9)

116.91(17)

C(20)-C(8)-C(9)

108.58(17)

C(12)-C(8)-C(9)

100.86(17)

O(1)-C(9)-C(21)

103.78(16)

O(1)-C(9)-C(10)

113.04(17)

C(21)-C(9)-C(10)

111.2(2)

O(1)-C(9)-C(8)

112.84(17)

C(21)-C(9)-C(8)

113.75(17)

C(10)-C(9)-C(8)

102.58(17)

C(9)-C(10)-C(11)

107.38(17)

C(12)-C(11)-C(10)

104.06(17)

C(11)-C(12)-C(13)

120.00(17)

C(11)-C(12)-C(8)

104.06(16)

C(13)-C(12)-C(8)

114.20(17)

C(14)-C(13)-C(12)

111.14(17)

C(14)-C(13)-C(5)

110.92(16)

C(12)-C(13)-C(5)

108.63(15)

C(15)-C(14)-C(13)

112.15(17)

C(14)-C(15)-C(16)

111.98(16)

C(15)-C(16)-C(17)

110.17(16)

C(15)-C(16)-C(4)

112.82(16)

C(17)-C(16)-C(4)

113.09(17)

C(18)-C(17)-C(16)

110.79(16)

N(2)-C(18)-C(2)

111.98(18)

N(2)-C(18)-C(17)

124.87(18)

C(2)-C(18)-C(17)

123.14(18)

N(3)-C(22)-C(23)

111.9(2)

C(39)-C(23)-C(22)

104.21(18)

C(39)-C(23)-C(24)

122.52(18)

C(22)-C(23)-C(24)

133.3(2)

C(23)-C(24)-C(25)

111.80(17)

171

C(40)-C(25)-C(24)

108.75(16)

C(40)-C(25)-C(26)

111.27(16)

C(24)-C(25)-C(26)

109.37(16)

C(40)-C(25)-C(37)

110.27(16)

C(24)-C(25)-C(37)

108.87(15)

C(26)-C(25)-C(37)

108.26(15)

C(27)-C(26)-C(34)

111.00(16)

C(27)-C(26)-C(25)

113.95(15)

C(34)-C(26)-C(25)

114.32(16)

C(28)-C(27)-C(26)

112.71(16)

C(29)-C(28)-C(27)

110.88(17)

C(28)-C(29)-C(33)

108.32(16)

C(28)-C(29)-C(41)

110.22(16)

C(33)-C(29)-C(41)

111.84(17)

C(28)-C(29)-C(30)

117.14(17)

C(33)-C(29)-C(30)

100.86(16)

C(41)-C(29)-C(30)

108.17(16)

O(2)-C(30)-C(42)

107.95(17)

O(2)-C(30)-C(31)

110.32(16)

C(42)-C(30)-C(31)

111.28(17)

O(2)-C(30)-C(29)

110.73(16)

C(42)-C(30)-C(29)

113.85(17)

C(31)-C(30)-C(29)

102.67(17)

C(32)-C(31)-C(30)

107.07(16)

C(33)-C(32)-C(31)

104.14(16)

C(34)-C(33)-C(29)

113.92(16)

C(34)-C(33)-C(32)

119.45(17)

C(29)-C(33)-C(32)

104.03(15)

C(33)-C(34)-C(35)

111.10(16)

C(33)-C(34)-C(26)

109.13(16)

C(35)-C(34)-C(26)

110.52(16)

C(36)-C(35)-C(34)

111.75(16)

C(35)-C(36)-C(37)

112.53(17)

C(36)-C(37)-C(38)

109.87(16)

C(36)-C(37)-C(25)

113.02(16)

C(38)-C(37)-C(25)

113.15(16)

C(39)-C(38)-C(37)

109.52(17)

N(4)-C(39)-C(23)

107.99(19)

N(4)-C(39)-C(38)

126.4(2)

C(23)-C(39)-C(38)

125.65(18)

O(3)-C(43)-C(44)

113.08(19)

Table 8.29 Anisotropic displacement parameters (2 x 103) for stanozolol ethanol


dihydrate solvate. The anisotropic displacement factor exponent takes the form: -2 2
[h2 a*2 U11 + ... + 2 h k a* b* U12].
Atom

U11

U22

U33

U23

U13

U12

O(1)

34(1)

19(1)

24(1)

-1(1)

7(1)

9(1)

O(2)

24(1)

18(1)

22(1)

-4(1)

7(1)

4(1)

O(3)

32(1)

23(1)

27(1)

-5(1)

16(1)

-2(1)

O(4)

34(1)

26(1)

30(1)

3(1)

9(1)

8(1)

O(5)

32(1)

26(1)

28(1)

-1(1)

13(1)

-2(1)

N(1)

27(1)

12(1)

25(1)

4(1)

10(1)

1(1)

N(2)

26(1)

18(1)

23(1)

0(1)

10(1)

1(1)

172

N(3)

31(1)

18(1)

32(1)

-1(1)

13(1)

-4(1)

N(4)

27(1)

16(1)

33(1)

0(1)

13(1)

3(1)

C(1)

22(1)

16(1)

21(1)

0(1)

7(1)

1(1)

C(2)

18(1)

15(1)

18(1)

-1(1)

3(1)

-1(1)

C(3)

22(1)

18(1)

16(1)

0(1)

7(1)

1(1)

C(4)

18(1)

13(1)

15(1)

1(1)

5(1)

1(1)

C(5)

18(1)

16(1)

18(1)

-1(1)

6(1)

0(1)

C(6)

39(2)

14(1)

35(1)

4(1)

25(1)

3(1)

C(7)

41(2)

17(1)

29(1)

2(1)

21(1)

4(1)

C(8)

24(1)

14(1)

20(1)

1(1)

7(1)

3(1)

C(9)

26(1)

18(1)

24(1)

3(1)

6(1)

5(1)

C(10)

35(1)

15(1)

37(1)

3(1)

13(1)

1(1)

C(11)

32(1)

18(1)

36(1)

6(1)

17(1)

0(1)

C(12)

21(1)

16(1)

20(1)

3(1)

7(1)

1(1)

C(13)

21(1)

15(1)

16(1)

2(1)

7(1)

2(1)

C(14)

26(1)

19(1)

27(1)

5(1)

15(1)

-1(1)

C(15)

28(1)

20(1)

25(1)

2(1)

16(1)

2(1)

C(16)

19(1)

17(1)

17(1)

0(1)

6(1)

0(1)

C(17)

27(1)

20(1)

24(1)

1(1)

14(1)

5(1)

C(18)

20(1)

15(1)

17(1)

0(1)

4(1)

2(1)

C(19)

23(1)

19(1)

21(1)

-1(1)

5(1)

0(1)

C(20)

24(1)

25(1)

31(1)

-2(1)

7(1)

4(1)

C(21)

37(1)

21(1)

31(1)

-5(1)

2(1)

5(1)

C(22)

24(1)

22(1)

28(1)

-1(1)

10(1)

-1(1)

C(23)

22(1)

15(1)

17(1)

0(1)

5(1)

-1(1)

C(24)

19(1)

15(1)

21(1)

0(1)

7(1)

-1(1)

C(25)

14(1)

15(1)

14(1)

2(1)

4(1)

0(1)

C(26)

15(1)

16(1)

15(1)

1(1)

4(1)

-1(1)

C(27)

16(1)

14(1)

24(1)

0(1)

10(1)

-2(1)

C(28)

17(1)

18(1)

20(1)

-1(1)

8(1)

-2(1)

C(29)

16(1)

14(1)

17(1)

0(1)

6(1)

0(1)

C(30)

22(1)

15(1)

20(1)

-1(1)

9(1)

-2(1)

C(31)

27(1)

18(1)

31(1)

0(1)

12(1)

-4(1)

173

C(32)

21(1)

20(1)

26(1)

-2(1)

10(1)

-3(1)

C(33)

18(1)

14(1)

17(1)

1(1)

5(1)

-1(1)

C(34)

14(1)

16(1)

16(1)

1(1)

6(1)

-1(1)

C(35)

14(1)

18(1)

27(1)

-1(1)

9(1)

-3(1)

C(36)

17(1)

21(1)

24(1)

1(1)

10(1)

2(1)

C(37)

16(1)

18(1)

17(1)

0(1)

4(1)

-1(1)

C(38)

22(1)

18(1)

26(1)

2(1)

9(1)

5(1)

C(39)

25(1)

15(1)

20(1)

0(1)

6(1)

1(1)

C(40)

23(1)

19(1)

19(1)

0(1)

5(1)

1(1)

C(41)

22(1)

20(1)

20(1)

-2(1)

6(1)

-1(1)

C(42)

32(1)

20(1)

19(1)

1(1)

7(1)

3(1)

C(43)

31(1)

38(1)

25(1)

0(1)

10(1)

-8(1)

C(44)

35(2)

45(2)

42(1)

-10(1)

15(1)

-12(1)

Table 8.30 Hydrogen coordinates ( x 104) and isotropic displacement parameters (2


x 103) for stanozolol ethanol dihydrate solvate.
Atom

U(eq)

H(1O1)

2565

819

3757

34

H(1O2)

400(40)

5013(9)

9820(20)

36(7)

H(1O3)

-3971

5108

4277

33

H(1O4)

7280(50)

287(10)

8450(30)

86(12)

H(2O4)

6420(30)

457(11)

6981(18)

86(12)

H(1O5)

1930(40)

525(8)

1510(20)

57(9)

H(2O5)

2140(50)

487(11)

110(30)

92(12)

H(1N1)

-1573

5135

2499

27

H(1N4)

4706

853

8196

32

H(1)

-258

4496

1534

26

H(3A)

772

3521

2565

24

H(3B)

-1452

3397

1871

24

H(5)

-1643

2638

2680

23

H(6A)

1338

2742

2379

34

H(6B)

2410

2544

3857

34

H(7A)

-84

1977

1702

35

174

H(7B)

2189

1907

2328

35

H(10A)

160

731

4785

37

H(10B)

-1907

723

3642

37

H(11A)

-2760

1358

4643

35

H(11B)

-617

1402

5691

35

H(12)

-2104

1813

3092

25

H(13)

315

2326

5361

22

H(14A)

-3750

2397

4080

30

H(14B)

-2694

2239

5599

30

H(15A)

-1493

3023

6157

29

H(15B)

-3768

3055

5467

29

H(16)

-3407

3273

3427

23

H(17A)

-3715

3923

4693

29

H(17B)

-1513

3898

5621

29

H(19A)

2486

3292

4779

29

H(19B)

1458

3122

5817

29

H(19C)

1302

3675

5333

29

H(20A)

3641

1511

4489

35

H(20B)

2390

1378

5419

35

H(20C)

2839

1933

5197

35

H(21A)

-689

1217

1015

42

H(21B)

-2423

1288

1587

42

H(21C)

-1685

754

1419

42

H(22)

-245

1190

8446

31

H(24A)

927

2176

9413

23

H(24B)

697

2288

7885

23

H(26)

2041

3053

8023

20

H(27A)

373

2970

9543

23

H(27B)

2196

3157

10737

23

H(28A)

3735

8503

23

H(28B)

31

3803

10011

23

H(31A)

3820

4980

8371

32

H(31B)

4722

4944

9971

32

175

H(32A)

5549

4329

8203

29

H(32B)

6320

4268

9805

29

H(33)

2895

3882

7942

22

H(34)

5342

3361

10174

20

H(35A)

4986

3283

7394

25

H(35B)

6886

3440

8571

25

H(36A)

7239

2663

9480

26

H(36B)

7061

2621

7938

26

H(37)

3843

2404

7368

23

H(38A)

5874

1755

7728

28

H(38B)

6439

1796

9322

28

H(40A)

5722

2549

10955

27

H(40B)

4768

2022

10788

27

H(40C)

3736

2471

11225

27

H(41A)

2816

4182

11718

27

H(41B)

4734

4295

11386

27

H(41C)

4133

3745

11532

27

H(42A)

-709

4504

7933

31

H(42B)

855

4436

7202

31

H(42C)

344

4968

7588

31

H(43A)

-5078

5223

6413

40

H(43B)

-3859

4770

6201

40

H(44A)

-7670

4972

4559

52

H(44B)

-7083

4560

5685

52

H(44C)

-6450

4513

4384

52

176

7) Stanozolol isopropanol dihydrate solvate.

Table 8.31 Crystal data and structure refinement for stanozolol isopropanol dihydrate
solvate.
Identification code

stanozolol_7

Empirical formula

C24 H44 N2 O4

Formula weight

424.61

Temperature

150(2) K

Wavelength

0.7107

Crystal system

Monoclinic

Space group

P21

Unit cell dimensions

a = 10.5093(3)
b = 7.2906(2), = 94.812(3)
c = 15.5622(5)

Volume

1188.16(6) 3

Density (calculated)

1.187 Mg/m3

Absorption coefficient

0.080 mm-1

F(000)

468

Crystal size

0.80 x 0.35 x 0.15 mm

Theta range for data collection

3.0803 to 29.0461

Index ranges

-9<=h<=14; -8<=k<=9; -17<=l<=20

Reflections collected

5499

Independent reflections

3650 [Rint = 0.0169]

Reflections observed (>2)

3157
177

Data Completeness

0.997

Absorption correction

Semi-empirical from equivalents

Max. and min. transmission

1.00000 and 0.99491

Refinement method

Full-matrix least-squares on F2

Data / restraints / parameters

3650 / 5 / 294

Goodness-of-fit on F2

0.973

Final R indices [I>2(I)]

R1 = 0.0332 wR2 = 0.0733

R indices (all data)

R1 = 0.0397 wR2 = 0.0747

Absolute structure parameter

0.5(9)

Largest diff. peak and hole

0.196 and -0.207 e.-3

Table 8.32 Atomic coordinates ( x 104) and equivalent isotropic displacement


parameters (2 x 103) for stanozolol isopropanol dihydrate solvate. U(eq) is defined
as one third of the trace of the orthogonalized Uij tensor.
Atom

U(eq)

O(1)

2688(1)

528(2)

6431(1)

22(1)

O(2)

3156(1)

4152(2)

6180(1)

31(1)

O(3)

8724(1)

4522(2)

5100(1)

25(1)

O(4)

8698(1)

645(2)

4999(1)

25(1)

N(1)

2165(2)

3638(2)

13585(1)

23(1)

N(2)

1924(2)

1824(2)

13503(1)

21(1)

C(1)

2432(2)

4291(3)

12821(1)

21(1)

C(2)

2366(2)

2883(2)

12218(1)

18(1)

C(3)

2517(2)

2844(2)

11264(1)

18(1)

C(4)

2672(2)

875(2)

10917(1)

16(1)

C(5)

2331(2)

874(2)

9926(1)

16(1)

C(6)

3155(2)

2161(2)

9422(1)

21(1)

C(7)

2689(2)

2279(2)

8462(1)

21(1)

C(8)

2623(2)

376(2)

8041(1)

17(1)

C(9)

1890(2)

203(2)

7128(1)

19(1)

C(10)

1495(2)

-1839(3)

7084(1)

24(1)

C(11)

1591(2)

-2587(3)

8011(1)

25(1)

C(12)

1799(2)

-858(2)

8566(1)

18(1)

178

C(13)

2266(2)

-1057(2)

9515(1)

17(1)

C(14)

1369(2)

-2301(3)

9975(1)

22(1)

C(15)

1679(2)

-2334(3)

10942(1)

23(1)

C(16)

1699(2)

-409(2)

11325(1)

17(1)

C(17)

1896(2)

-514(2)

12312(1)

23(1)

C(18)

2055(2)

1355(2)

12679(1)

18(1)

C(19)

4048(2)

241(3)

11161(1)

22(1)

C(20)

3980(2)

-380(3)

8002(1)

24(1)

C(21)

750(2)

1480(3)

6999(1)

25(1)

C(22)

4762(2)

6465(3)

6057(1)

35(1)

C(23)

4335(2)

4550(3)

5810(1)

26(1)

C(24)

5288(2)

3117(3)

6130(1)

33(1)

Table 8.33 Bond lengths [] and angles [] for stanozolol isopropanol dihydrate
solvate.
Bond lengths []
O(1)-C(9)

1.445(2)

O(2)-C(23)

1.438(2)

N(1)-C(1)

1.332(2)

N(1)-N(2)

1.351(2)

N(2)-C(18)

1.345(2

C(1)-C(2)

1.388(3)

C(2)-C(18)

1.379(2

C(2)-C(3)

1.506(2)

C(3)-C(4)

1.547(2)

C(4)-C(19)

1.536(2)

C(4)-C(5)

1.554(2)

C(4)-C(16)

1.560(2)

C(5)-C(6)

1.536(2)

C(5)-C(13)

1.545(2)

C(6)-C(7)

1.535(2)

C(7)-C(8)

1.534(2)

C(8)-C(12)

1.532(2)

C(8)-C(20)

1.534(2)

C(8)-C(9)

1.564(2)

C(9)-C(21)

1.517(3)

C(9)-C(10)

1.545(3)

C(10)-C(11)

1.539(3)

C(11)-C(12)

1.534(2)

C(12)-C(13)

1.523(2)

C(13)-C(14)

1.529(2)

C(14)-C(15)

1.514(2)

C(15)-C(16)

1.524(2)

C(16)-C(17)

1.534(2)

C(17)-C(18)

1.482(2)

C(22)-C(23)

1.507(3)

C(23)-C(24)

1.504(3)

179

Bond angles []
C(1)-N(1)-N(2)

108.49(15)

C(18)-N(2)-N(1)

107.79(15)

N(1)-C(1)-C(2)

109.68(17)

C(18)-C(2)-C(1)

104.28(15)

C(18)-C(2)-C(3)

123.11(15)

C(1)-C(2)-C(3)

132.57(17)

C(2)-C(3)-C(4)

112.61(14)

C(19)-C(4)-C(3)

108.51(14)

C(19)-C(4)-C(5)

112.25(14)

C(3)-C(4)-C(5)

108.95(13)

C(19)-C(4)-C(16)

110.77(15)

C(3)-C(4)-C(16)

108.84(14)

C(5)-C(4)-C(16)

107.46(14)

C(6)-C(5)-C(13)

110.66(13)

C(6)-C(5)-C(4)

114.43(14)

C(13)-C(5)-C(4)

114.19(13)

C(7)-C(6)-C(5)

112.56(15)

C(8)-C(7)-C(6)

111.39(14)

C(12)-C(8)-C(7)

108.08(14)

C(12)-C(8)-C(20)

112.29(15)

C(7)-C(8)-C(20)

109.44(15)

C(12)-C(8)-C(9)

100.36(14)

C(7)-C(8)-C(9)

117.56(14)

C(20)-C(8)-C(9)

108.90(14)

O(1)-C(9)-C(21)

107.61(14)

O(1)-C(9)-C(10)

107.19(14)

C(21)-C(9)-C(10)

112.30(16)

O(1)-C(9)-C(8)

113.27(14)

C(21)-C(9)-C(8)

113.17(14)

C(10)-C(9)-C(8)

103.19(14)

C(11)-C(10)-C(9)

107.68(15)

C(12)-C(11)-C(10)

103.40(15)

C(13)-C(12)-C(8)

114.99(14)

C(13)-C(12)-C(11)

119.09(15)

C(8)-C(12)-C(11)

104.02(14)

C(12)-C(13)-C(14)

110.43(14)

C(12)-C(13)-C(5)

108.28(13)

C(14)-C(13)-C(5)

110.73(14)

C(15)-C(14)-C(13)

112.69(15)

C(14)-C(15)-C(16)

111.64(15)

C(15)-C(16)-C(17)

109.96(14)

C(15)-C(16)-C(4)

112.44(14)

C(17)-C(16)-C(4)

113.58(14)

C(18)-C(17)-C(16)

109.95(14)

N(2)-C(18)-C(2)

109.76(16)

N(2)-C(18)-C(17)

125.71(15)

C(2)-C(18)-C(17)

124.53(16)

O(2)-C(23)-C(24)

107.41(16)

O(2)-C(23)-C(22)

109.46(16)

C(24)-C(23)-C(22)

112.55(17)

180

Table 8.34 Anisotropic displacement parameters (2 x 103) for stanozolol


isopropanol dihydrate solvate. The anisotropic displacement factor exponent takes
the form: -2 2 [h2 a*2 U11 + ... + 2 h k a* b* U12].
Atom

U11

U22

U33

U23

U13

U12

O(1)

26(1)

22(1)

18(1)

2(1)

6(1)

-2(1)

O(2)

23(1)

32(1)

36(1)

10(1)

2(1)

1(1)

O(3)

31(1)

29(1)

16(1)

0(1)

3(1)

3(1)

O(4)

27(1)

24(1)

23(1)

3(1)

0(1)

-1(1)

N(1)

28(1)

23(1)

18(1)

-3(1)

3(1)

3(1)

N(2)

22(1)

22(1)

19(1)

-2(1)

1(1)

3(1)

C(1)

27(1)

18(1)

19(1)

1(1)

1(1)

0(1)

C(2)

18(1)

18(1)

17(1)

-1(1)

0(1)

1(1)

C(3)

22(1)

15(1)

16(1)

2(1)

1(1)

-4(1)

C(4)

19(1)

15(1)

15(1)

0(1)

1(1)

-1(1)

C(5)

16(1)

16(1)

17(1)

1(1)

1(1)

-2(1)

C(6)

27(1)

17(1)

17(1)

-2(1)

3(1)

-6(1)

C(7)

27(1)

18(1)

18(1)

2(1)

4(1)

-2(1)

C(8)

19(1)

16(1)

15(1)

0(1)

1(1)

0(1)

C(9)

18(1)

23(1)

17(1)

-2(1)

3(1)

1(1)

C(10)

26(1)

25(1)

21(1)

-4(1)

3(1)

-6(1)

C(11)

37(1)

19(1)

18(1)

-2(1)

3(1)

-7(1)

C(12)

19(1)

16(1)

19(1)

0(1)

3(1)

0(1)

C(13)

20(1)

15(1)

16(1)

-1(1)

2(1)

-1(1)

C(14)

30(1)

15(1)

21(1)

-2(1)

3(1)

-6(1)

C(15)

32(1)

16(1)

22(1)

2(1)

4(1)

-6(1)

C(16)

19(1)

15(1)

17(1)

1(1)

2(1)

-2(1)

C(17)

29(1)

19(1)

21(1)

0(1)

5(1)

-3(1)

C(18)

18(1)

21(1)

15(1)

0(1)

1(1)

1(1)

C(19)

22(1)

24(1)

19(1)

-1(1)

-1(1)

-1(1)

C(20)

20(1)

30(1)

21(1)

0(1)

2(1)

3(1)

C(21)

25(1)

33(1)

17(1)

-1(1)

-1(1)

4(1)

C(22)

33(1)

34(1)

39(1)

1(1)

2(1)

-3(1)

C(23)

24(1)

29(1)

24(1)

3(1)

2(1)

-2(1)

181

C(24)

27(1)

37(1)

37(1)

-1(1)

4(1)

3(1)

Table 8.35 Hydrogen coordinates ( x 104) and isotropic displacement parameters (2


x 103) for stanozolol isopropanol dihydrate solvate.
Atom

U(eq)

H(1O1)

2782

1662

6366

32

H(2O2)

2542

4578

5861

46

H(1O3)

8370(30)

5230(40)

4619(16)

108(12)

H(2O3)

8530(40)

5420(40)

5546(18)

126(13)

H(1O4)

8640(30)

1930(30)

5070(20)

118(14)

H(2O4)

9600(20)

280(60)

4980(30)

165(17)

H(1N1)

2148

4281

14062

30

H(1)

2637

5531

12706

27

H(3A)

3274

3578

11145

21

H(3B)

1759

3420

10953

21

H(5)

1444

1373

9839

19

H(6A)

3143

3403

9678

25

H(6B)

4049

1719

9478

25

H(7A)

1832

2851

8400

25

H(7B)

3278

3068

8162

25

H(10A)

609

-1961

6818

28

H(10B)

2068

-2535

6730

28

H(11A)

796

-3227

8136

30

H(11B)

2319

-3445

8111

30

H(12)

947

-243

8556

21

H(13)

3141

-1608

9561

21

H(14A)

480

-1871

9846

26

H(14B)

1425

-3563

9747

26

H(15A)

2523

-2918

11076

28

H(15B)

1033

-3082

11211

28

H(16)

832

127

11180

20

H(17A)

1150

-1116

12540

27

H(17B)

2663

-1258

12484

27

182

H(19A)

4232

309

11788

32

H(19B)

4642

1037

10881

32

H(19C)

4150

-1027

10969

32

H(20A)

3938

-1595

7732

35

H(20B)

4396

-478

8587

35

H(20C)

4471

451

7661

35

H(21A)

286

1234

6439

38

H(21B)

1047

2755

7018

38

H(21C)

183

1276

7459

38

H(22A)

4939

6540

6684

53

H(22B)

4086

7339

5869

53

H(22C)

5538

6763

5778

53

H(23)

4194

4467

5168

31

H(24A)

4977

1902

5943

50

H(24B)

5401

3156

6761

50

H(24C)

6108

3358

5894

50

183

8) Stanozolol monohydrate.

Table 8.36 Crystal data and structure refinement for stanozolol monohydrate.
Identification code

stanozolol_8

Empirical formula

C21 H34 N2 O2

Formula weight

346.50

Temperature

298(2) K

Wavelength

0.7107

Crystal system

Orthorhombic

Space group

P212121

Unit cell dimensions

a = 7.2098(5)
b = 10.4654(7)
c = 26.0313(13)

Volume

1964.2(2) 3

Density (calculated)

1.172 Mg/m3

Absorption coefficient

0.075 mm-1

F(000)

760

Crystal size

0.85 x 0.15 x 0.15 mm

Theta range for data collection

2.9258 to 29.1472

Index ranges

-9<=h<=7; -14<=k<=13; -32<=l<=28

Reflections collected

10407
184

Independent reflections

3552 [Rint = 0.0345]

Reflections observed (>2)

2182

Data Completeness

0.998

Absorption correction

Semi-empirical from equivalents

Max. and min. transmission

1.00000 and 0.98416

Refinement method

Full-matrix least-squares on F2

Data / restraints / parameters

3552 / 2 / 237

Goodness-of-fit on F2

0.801

Final R indices [I>2(I)]

R1 = 0.0372 wR2 = 0.0631

R indices (all data)

R1 = 0.0720 wR2 = 0.0676

Absolute structure parameter

1.2(15)

Largest diff. peak and hole

0.115 and -0.159 e.-3

Table 8.37 Atomic coordinates ( x 104) and equivalent isotropic displacement


parameters (2 x 103) for stanozolol monohydrate. U(eq) is defined as one third of
the trace of the orthogonalized Uij tensor.
Atom

U(eq)

O(1)

7201(2)

4126(1)

5082(1)

41(1)

O(2)

10839(3)

3497(2)

4951(1)

60(1)

N(1)

11901(3)

5089(2)

9226(1)

47(1)

N(2)

10170(3)

5583(2)

9191(1)

44(1)

C(1)

12414(3)

4919(2)

8741(1)

41(1)

C(2)

11022(3)

5290(2)

8395(1)

32(1)

C(3)

10862(3)

5256(2)

7822(1)

34(1)

C(4)

8825(3)

5255(2)

7648(1)

27(1)

C(5)

8700(3)

5538(2)

7064(1)

28(1)

C(6)

9864(3)

4624(2)

6730(1)

41(1)

C(7)

9647(3)

4853(2)

6151(1)

40(1)

C(8)

7616(3)

4811(2)

5999(1)

28(1)

C(9)

7101(3)

5188(2)

5438(1)

36(1)

C(10)

5058(3)

5575(2)

5482(1)

52(1)

C(11)

4712(3)

5968(2)

6047(1)

54(1)

C(12)

6615(3)

5866(2)

6302(1)

32(1)

185

C(13)

6690(3)

5653(2)

6879(1)

28(1)

C(14)

5725(3)

6736(2)

7166(1)

45(1)

C(15)

5823(3)

6538(2)

7745(1)

49(1)

C(16)

7795(3)

6339(2)

7937(1)

35(1)

C(17)

7780(3)

6167(2)

8524(1)

46(1)

C(18)

9610(3)

5707(2)

8701(1)

35(1)

C(19)

7982(3)

3950(2)

7780(1)

41(1)

C(20)

6814(3)

3487(2)

6107(1)

46(1)

C(21)

8279(3)

6261(2)

5218(1)

57(1)

Table 8.38 Bond lengths [] and angles [] for stanozolol monohydrate.


Bond lengths []
O(1)-C(9)

1.449(2)

N(1)-C(1)

1.329(2)

N(1)-N(2)

1.354(2)

N(2)-C(18)

1.346(2)

C(1)-C(2)

1.403(3)

C(2)-C(18)

1.364(3)

C(2)-C(3)

1.495(2)

C(3)-C(4)

1.537(2)

C(4)-C(19)

1.534(3

C(4)-C(5)

1.549(2)

C(4)-C(16)

1.551(3)

C(5)-C(13)

1.533(3)

C(5)-C(6)

1.543(2)

C(6)-C(7)

1.534(2)

C(7)-C(8)

1.518(2)

C(8)-C(20)

1.527(3)

C(8)-C(12)

1.537(3

C(8)-C(9)

1.558(2)

C(9)-C(21)

1.519(3)

C(9)-C(10)

1.532(2)

C(10)-C(11)

1.549(3)

C(11)-C(12)

1.528(3)

C(12)-C(13)

1.519(2)

C(13)-C(14)

1.526(2)

C(14)-C(15)

1.523(2)

C(15)-C(16)

1.521(2)

C(16)-C(17)

1.538(2)

C(17)-C(18)

1.477(3)

Bond angles []
C(1)-N(1)-N(2)

104.10(16)

C(18)-N(2)-N(1)

112.19(16)

N(1)-C(1)-C(2)

111.98(19)

C(18)-C(2)-C(1)

104.36(15)

C(18)-C(2)-C(3)

122.09(19)

C(1)-C(2)-C(3)

133.51(19)

C(2)-C(3)-C(4)

111.63(15)

C(19)-C(4)-C(3)

108.21(18)

C(19)-C(4)-C(5)

111.58(15)

C(3)-C(4)-C(5)

110.18(15)
186

C(19)-C(4)-C(16)

110.61(15)

C(3)-C(4)-C(16)

108.25(16)

C(5)-C(4)-C(16)

107.96(15)

C(13)-C(5)-C(6)

112.63(14)

C(13)-C(5)-C(4)

112.28(14)

C(6)-C(5)-C(4)

113.77(15)

C(7)-C(6)-C(5)

113.70(17)

C(8)-C(7)-C(6)

110.51(15)

C(7)-C(8)-C(20)

110.10(19)

C(7)-C(8)-C(12)

107.33(16)

C(20)-C(8)-C(12)

112.32(16)

C(7)-C(8)-C(9)

117.85(16)

C(20)-C(8)-C(9)

108.20(15)

C(12)-C(8)-C(9)

100.79(15)

O(1)-C(9)-C(21)

107.43(15)

O(1)-C(9)-C(10)

107.38(16)

C(21)-C(9)-C(10)

111.74(19)

O(1)-C(9)-C(8)

113.09(16)

C(21)-C(9)-C(8)

113.97(17)

C(10)-C(9)-C(8)

103.07(15)

C(9)-C(10)-C(11)

107.22(16)

C(12)-C(11)-C(10)

104.45(16)

C(13)-C(12)-C(11)

118.10(15)

C(13)-C(12)-C(8)

112.68(16)

C(11)-C(12)-C(8)

104.39(15)

C(12)-C(13)-C(14)

111.11(16)

C(12)-C(13)-C(5)

110.91(14)

C(14)-C(13)-C(5)

109.54(15)

C(15)-C(14)-C(13)

111.33(17)

C(16)-C(15)-C(14)

112.77(17)

C(15)-C(16)-C(17)

109.60(15)

C(15)-C(16)-C(4)

112.86(16)

C(17)-C(16)-C(4)

113.60(16)

C(18)-C(17)-C(16)

109.92(15)

N(2)-C(18)-C(2)

107.37(18)

N(2)-C(18)-C(17)

126.50(18)

C(2)-C(18)-C(17)

126.10(16)

Table 8.39 Anisotropic displacement parameters (2 x 103) for stanozolol


monohydrate. The anisotropic displacement factor exponent takes the form: -2 2 [h2
a*2 U11 + ... + 2 h k a* b* U12].
Atom

U11

U22

U33

U23

U13

U12

O(1)

40(1)

52(1)

31(1)

-8(1)

-3(1)

1(1)

O(2)

63(1)

57(1)

60(1)

-2(1)

28(1)

4(1)

N(1)

46(1)

61(1)

33(1)

2(1)

-4(1)

-1(1)

N(2)

43(1)

61(2)

27(1)

-4(1)

5(1)

-2(1)

C(1)

37(2)

57(2)

30(1)

-2(1)

4(1)

1(1)

C(2)

28(1)

41(1)

28(1)

-1(1)

0(1)

-4(1)

C(3)

33(1)

45(1)

26(1)

-1(1)

2(1)

2(1)

C(4)

29(1)

27(1)

25(1)

-3(1)

0(1)

-2(1)

C(5)

27(1)

29(1)

27(1)

-3(1)

2(1)

-2(1)

187

C(6)

34(1)

62(2)

27(1)

-10(1)

-4(1)

11(1)

C(7)

33(1)

60(2)

28(1)

-8(1)

1(1)

7(1)

C(8)

31(1)

32(1)

22(1)

1(1)

1(1)

1(1)

C(9)

43(2)

39(1)

27(1)

-1(1)

-1(1)

3(1)

C(10)

49(2)

74(2)

34(1)

-5(1)

-8(1)

19(1)

C(11)

45(2)

78(2)

38(1)

-7(1)

-10(1)

21(2)

C(12)

35(2)

33(1)

29(1)

-2(1)

-2(1)

7(1)

C(13)

25(1)

33(1)

27(1)

-4(1)

1(1)

3(1)

C(14)

41(2)

57(2)

38(1)

-10(1)

-6(1)

23(1)

C(15)

37(2)

68(2)

40(1)

-15(1)

-1(1)

19(1)

C(16)

34(2)

39(1)

30(1)

-8(1)

1(1)

3(1)

C(17)

38(2)

68(2)

31(1)

-11(1)

1(1)

6(1)

C(18)

35(2)

47(2)

23(1)

-2(1)

-4(1)

-7(1)

C(19)

47(2)

41(1)

36(1)

2(1)

0(1)

-8(1)

C(20)

67(2)

40(1)

32(1)

-1(1)

-2(1)

-4(1)

C(21)

87(2)

49(2)

35(1)

10(1)

0(1)

-7(2)

Table 8.40 Hydrogen coordinates ( x 104) and isotropic displacement parameters (2


x 103) for stanozolol monohydrate.
Atom

U(eq)

H(1O1)

8282

3892

5054

53

H(1O2)

11450(40)

4080(30)

4744(9)

126(13)

H(2O2)

11040(40)

2630(20)

4870(12)

144(15)

H(2N2)

9506

5792

9452

57

H(1)

13560

4593

8642

54

H(3A)

11473

4496

7693

45

H(3B)

11487

5995

7678

45

H(5)

9250

6387

7018

36

H(6A)

11161

4719

6821

53

H(6B)

9505

3751

6807

53

H(7A)

10164

5680

6062

52

H(7B)

10325

4204

5963

52

H(10A)

4263

4864

5388

68

188

H(10B)

4792

6285

5254

68

H(11A)

4241

6834

6067

70

H(11B)

3831

5396

6209

70

H(12)

7271

6667

6232

42

H(13)

6045

4853

6957

37

H(14A)

6309

7541

7078

59

H(14B)

4437

6778

7060

59

H(15A)

5295

7278

7916

63

H(15B)

5080

5800

7837

63

H(16)

8474

7131

7867

45

H(17A)

7494

6975

8688

59

H(17B)

6829

5556

8619

59

H(19A)

8256

3743

8132

53

H(19B)

8501

3309

7559

53

H(19C)

6663

3981

7733

53

H(20A)

7543

2853

5933

60

H(20B)

5558

3450

5985

60

H(20C)

6837

3326

6470

60

H(21A)

9552

5994

5204

74

H(21B)

8174

7002

5434

74

H(21C)

7856

6466

4878

74

189

9) Stanozolol acetic acid solvate.

Table 8.41 Crystal data and structure refinement for stanozolol acetic acid solvate.
Identification code

stanozolol_9

Empirical formula

C25 H40 N2 O5

Formula weight

448.59

Temperature

298(2) K

Wavelength

0.7107

Crystal system

Monoclinic

Space group

P21

Unit cell dimensions

a = 10.3775(8)
b = 7.4347(6), = 91.895(6)
c = 15.5801(8)

Volume

1201.40(14) 3

Density (calculated)

1.240 Mg/m3

Absorption coefficient

0.086 mm-1

F(000)

488

Crystal size

0.45 x 0.10 x 0.05 mm

Theta range for data collection

3.2136 to 29.1114

Index ranges

-13<=h<=13; -7<=k<=10; -19<=l<=12

Reflections collected

5253

Independent reflections

3275 [Rint = 0.0395]

Reflections observed (>2)

1872

Data Completeness

0.971
190

Absorption correction

Semi-empirical from equivalents

Max. and min. transmission

1.00000 and 0.98722

Refinement method

Full-matrix least-squares on F2

Data / restraints / parameters

3275 / 1 / 294

Goodness-of-fit on F

0.875

Final R indices [I>2(I)]

R1 = 0.0504 wR2 = 0.0824

R indices (all data)

R1 = 0.0921 wR2 = 0.0900

Absolute structure parameter

1.0(17)

Largest diff. peak and hole

0.196 and -0.179 e.-3

Table 8.42 Atomic coordinates ( x 104) and equivalent isotropic displacement


parameters (2 x 103) for stanozolol acetic acid solvate. U(eq) is defined as one third
of the trace of the orthogonalized Uij tensor.
Atom

U(eq)

O(1)

403(2)

1581(4)

1416(1)

50(1)

O(2)

-676(3)

-1558(4)

1598(2)

63(1)

O(3)

-464(3)

-1867(4)

217(2)

66(1)

O(4)

5681(3)

-874(4)

9848(2)

59(1)

O(5)

6047(3)

3(4)

11177(1)

65(1)

N(1)

4650(3)

108(5)

8176(2)

47(1)

N(2)

4681(3)

1914(5)

8041(2)

43(1)

C(1)

4123(4)

-788(6)

7510(2)

41(1)

C(2)

3788(3)

467(6)

6896(2)

36(1)

C(3)

3181(4)

284(5)

6005(2)

34(1)

C(4)

2658(3)

2109(5)

5660(2)

28(1)

C(5)

2522(3)

1975(5)

4653(2)

28(1)

C(6)

1601(4)

496(5)

4336(2)

36(1)

C(7)

1599(4)

284(5)

3350(2)

37(1)

C(8)

1266(4)

2045(6)

2898(2)

31(1)

C(9)

1532(4)

2157(6)

1924(2)

37(1)

C(10)

1743(4)

4194(5)

1761(2)

42(1)

C(11)

1985(4)

5086(5)

2648(2)

44(1)

C(12)

2210(3)

3475(5)

3243(2)

31(1)

191

C(13)

2193(4)

3783(5)

4215(2)

29(1)

C(14)

3152(4)

5232(5)

4476(2)

38(1)

C(15)

3329(4)

5391(5)

5447(2)

39(1)

C(16)

3674(4)

3592(5)

5861(2)

32(1)

C(17)

3940(4)

3874(5)

6831(2)

44(1)

C(18)

4146(3)

2119(6)

7252(2)

37(1)

C(19)

1376(3)

2524(5)

6067(2)

40(1)

C(20)

-149(3)

2558(6)

3048(2)

45(1)

C(21)

2666(4)

1059(6)

1640(2)

59(1)

C(22)

-889(4)

-2408(6)

882(2)

43(1)

C(23)

-1670(4)

-4078(6)

937(3)

55(1)

C(24)

6952(4)

1764(6)

10114(2)

61(1)

C(25)

6166(4)

183(6)

10344(2)

42(1)

Table 8.43 Bond lengths [] and angles [] for stanozolol acetic acid solvate.
Bond lengths []
O(1)-C(9)

1.456(4)

O(2)-C(22)

1.293(4)

O(3)-C(22)

1.209(4)

O(4)-C(25)

1.202(4)

O(5)-C(25)

1.313(4

N(1)-C(1)

1.335(4)

N(1)-N(2)

1.359(4)

N(2)-C(18)

1.342(4)

C(1)-C(2)

1.374(5)

C(2)-C(18)

1.393(5)

C(2)-C(3)

1.512(4)

C(3)-C(4)

1.551(5)

C(4)-C(19)

1.525(4)

C(4)-C(16)

1.550(5)

C(4)-C(5)

1.573(4)

C(5)-C(6)

1.528(5)

C(5)-C(13)

1.541(5

C(6)-C(7)

1.544(4)

C(7)-C(8)

1.522(5)

C(8)-C(12)

1.531(5)

C(8)-C(20)

1.542(5

C(8)-C(9)

1.553(4)

C(9)-C(21)

1.511(5)

C(9)-C(10)

1.553(5)

C(10)-C(11)

1.547(4)

C(11)-C(12)

1.527(5)

C(12)-C(13)

1.534(4)

C(13)-C(14)

1.512(5)

C(14)-C(15)

1.523(4)

C(15)-C(16)

1.522(5)

C(16)-C(17)

1.542(4)

C(17)-C(18)

1.472(5)

C(22)-C(23)

1.487(5)

C(24)-C(25)

1.482(5)

192

Bond angles []
C(1)-N(1)-N(2)

112.6(3)

C(18)-N(2)-N(1)

104.1(3)

N(1)-C(1)-C(2)

106.9(4)

C(1)-C(2)-C(18)

105.3(3)

C(1)-C(2)-C(3)

131.9(4)

C(18)-C(2)-C(3)

122.9(4)

C(2)-C(3)-C(4)

111.7(3)

C(19)-C(4)-C(16)

111.7(3)

C(19)-C(4)-C(3)

109.4(3)

C(16)-C(4)-C(3)

108.9(3)

C(19)-C(4)-C(5)

112.1(3)

C(16)-C(4)-C(5)

106.5(3)

C(3)-C(4)-C(5)

108.0(3)

C(6)-C(5)-C(13)

111.0(3)

C(6)-C(5)-C(4)

113.8(3)

C(13)-C(5)-C(4)

113.4(3)

C(5)-C(6)-C(7)

112.1(3)

C(8)-C(7)-C(6)

111.5(3)

C(7)-C(8)-C(12)

107.5(3)

C(7)-C(8)-C(20)

110.2(3)

C(12)-C(8)-C(20)

112.1(3)

C(7)-C(8)-C(9)

117.0(3)

C(12)-C(8)-C(9)

100.0(3)

C(20)-C(8)-C(9)

109.6(3)

O(1)-C(9)-C(21)

107.6(3)

O(1)-C(9)-C(10)

108.3(3)

C(21)-C(9)-C(10)

111.4(4)

O(1)-C(9)-C(8)

110.5(3)

C(21)-C(9)-C(8)

114.9(3)

C(10)-C(9)-C(8)

104.0(3)

C(11)-C(10)-C(9)

106.9(3)

C(12)-C(11)-C(10)

102.9(3)

C(11)-C(12)-C(8)

104.4(3)

C(11)-C(12)-C(13)

118.4(3)

C(8)-C(12)-C(13)

115.0(3)

C(14)-C(13)-C(12)

110.1(3)

C(14)-C(13)-C(5)

111.6(3)

C(12)-C(13)-C(5)

107.3(3)

C(13)-C(14)-C(15)

112.3(3)

C(16)-C(15)-C(14)

111.8(3)

C(15)-C(16)-C(17)

109.1(3)

C(15)-C(16)-C(4)

113.0(3)

C(17)-C(16)-C(4)

113.1(3)

C(18)-C(17)-C(16)

109.5(3)

N(2)-C(18)-C(2)

111.2(4)

N(2)-C(18)-C(17)

124.0(4)

C(2)-C(18)-C(17)

124.8(3)

O(3)-C(22)-O(2)

121.3(4)

O(3)-C(22)-C(23)

122.8(4)

O(2)-C(22)-C(23)

115.8(3)

O(4)-C(25)-O(5)

121.2(4)

O(4)-C(25)-C(24)

125.8(3)

O(5)-C(25)-C(24)

113.0(4)

193

Table 8.44 Anisotropic displacement parameters (2 x 103) for stanozolol acetic acid
solvate. The anisotropic displacement factor exponent takes the form: -2 2 [h2 a*2
U11 + ... + 2 h k a* b* U12].
Atom

U11

U22

U33

U23

U13

U12

O(1)

56(2)

51(2)

42(1)

3(2)

-13(1)

-15(2)

O(2)

85(2)

76(2)

28(1)

-8(2)

3(1)

-22(2)

O(3)

94(3)

69(2)

34(2)

-13(2)

1(2)

-28(2)

O(4)

76(2)

65(2)

35(2)

5(2)

-6(1)

-15(2)

O(5)

97(3)

66(2)

30(2)

1(2)

-1(1)

-24(2)

N(1)

50(2)

63(3)

28(2)

3(2)

-6(2)

6(2)

N(2)

50(2)

48(2)

31(2)

-3(2)

-3(2)

-1(2)

C(1)

50(3)

39(3)

33(2)

-1(2)

-1(2)

6(2)

C(2)

33(3)

42(3)

33(2)

-2(2)

2(2)

5(2)

C(3)

39(3)

30(2)

31(2)

-4(2)

2(2)

3(2)

C(4)

30(2)

27(2)

26(2)

-1(2)

0(2)

-2(2)

C(5)

33(2)

25(2)

26(2)

-1(2)

3(2)

-2(2)

C(6)

45(3)

34(3)

29(2)

2(2)

-3(2)

-4(2)

C(7)

46(3)

31(3)

33(2)

-6(2)

-3(2)

-7(2)

C(8)

34(2)

30(2)

28(2)

3(2)

1(2)

-4(2)

C(9)

33(3)

49(3)

30(2)

0(2)

0(2)

-4(2)

C(10)

41(3)

50(3)

34(2)

6(2)

-1(2)

-8(2)

C(11)

55(3)

36(3)

40(2)

7(2)

-2(2)

-8(2)

C(12)

33(2)

33(3)

26(2)

-1(2)

0(2)

-2(2)

C(13)

28(2)

27(3)

32(2)

-1(2)

2(2)

1(2)

C(14)

42(3)

31(2)

40(2)

2(2)

-1(2)

-5(2)

C(15)

54(3)

28(3)

36(2)

-5(2)

-2(2)

-4(2)

C(16)

30(2)

31(3)

34(2)

-9(2)

-2(2)

1(2)

C(17)

57(3)

43(3)

32(2)

-3(2)

-10(2)

-2(2)

C(18)

42(3)

46(3)

23(2)

-4(2)

0(2)

-1(2)

C(19)

43(3)

45(3)

33(2)

-1(2)

5(2)

7(2)

C(20)

44(3)

56(3)

34(2)

-1(2)

-2(2)

-4(2)

C(21)

71(4)

70(4)

37(2)

-5(2)

6(2)

11(3)

C(22)

45(3)

54(3)

30(2)

2(2)

1(2)

5(2)

194

C(23)

49(3)

48(3)

70(3)

1(2)

8(2)

-10(3)

C(24)

67(3)

54(3)

63(3)

6(3)

14(2)

-9(3)

C(25)

43(3)

46(3)

36(2)

4(3)

-4(2)

8(3)

Table 8.45 Hydrogen coordinates ( x 104) and isotropic displacement parameters (2


x 103) for stanozolol acetic acid solvate.
Atom

U(eq)

H(1O1)

273

508

1499

65

H(1O3)

-708

-2525

-178

86

H(1O5)

5621

-899

11273

84

H(1N1)

4939

-401

8640

61

H(1)

4005

-2026

7470

53

H(3A)

2480

-577

6018

44

H(3B)

3818

-175

5618

44

H(5)

3375

1636

4457

36

H(6A)

735

779

4510

47

H(6B)

1853

-635

4603

47

H(7A)

2444

-116

3180

48

H(7B)

976

-628

3174

48

H(10A)

2478

4376

1402

54

H(10B)

987

4713

1473

54

H(11A)

2735

5864

2648

57

H(11B)

1242

5780

2816

57

H(12)

3074

3025

3125

40

H(13)

1327

4160

4372

38

H(14A)

2856

6377

4245

49

H(14B)

3977

4962

4231

49

H(15A)

4008

6252

5582

51

H(15B)

2539

5838

5685

51

H(16)

4485

3194

5616

41

H(17A)

4699

4621

6922

57

H(17B)

3214

4481

7079

57

H(19A)

1480

2456

6681

52

195

H(19B)

741

1664

5872

52

H(19C)

1100

3712

5905

52

H(20A)

-352

3662

2753

58

H(20B)

-269

2712

3652

58

H(20C)

-707

1620

2832

58

H(21A)

2819

1305

1048

77

H(21B)

2482

-197

1709

77

H(21C)

3418

1371

1984

77

H(23A)

-1349

-4961

549

72

H(23B)

-2554

-3814

786

72

H(23C)

-1612

-4538

1513

72

H(24A)

6663

2212

9562

80

H(24B)

7841

1417

10091

80

H(24C)

6862

2688

10538

80

196

10) Stanozolol formamide solvate.

Table 8.46 Crystal data and structure refinement for stanozolol formamide solvate.
Identification code

stanozolol_10

Empirical formula

C43 H64 N5 O3

Formula weight

698.99

Temperature

293(2) K

Wavelength

0.7107

Crystal system

Orthorhombic

Space group

P212121

Unit cell dimensions

a = 7.5672(3)
b = 19.6475(9)
c = 26.3375(9)

Volume

3915.8(3) 3

4
197

Density (calculated)

1.186 Mg/m3

Absorption coefficient

0.075 mm-1

F(000)

1524

Crystal size

0.50 x 0.40 x 0.20 mm

Theta range for data collection

2.9805 to 28.9672

Index ranges

-8<=h<=10; -26<=k<=19; -32<=l<=32

Reflections collected

14471

Independent reflections

6840 [Rint = 0.0264]

Reflections observed (>2)

4211

Data Completeness

0.998

Absorption correction

Semi-empirical from equivalents

Max. and min. transmission

1.00000 and 0.99372

Refinement method

Full-matrix least-squares on F2

Data / restraints / parameters

6840 / 0 / 466

Goodness-of-fit on F2

0.909

Final R indices [I>2(I)]

R1 = 0.0476 wR2 = 0.1086

R indices (all data)

R1 = 0.0852 wR2 = 0.1176

Absolute structure parameter

1.3(17)

Largest diff. peak and hole

0.395 and -0.206 e.-3

Table 8.47 Atomic coordinates ( x 104) and equivalent isotropic displacement


parameters (2 x 103) for stanozolol formamide solvate. U(eq) is defined as one third
of the trace of the orthogonalized Uij tensor.
Atom

U(eq)

O(1)

5892(3)

5744(1)

-203(1)

59(1)

O(2)

774(3)

4012(1)

3889(1)

55(1)

O(3)

6025(5)

-330(2)

1107(2)

148(2)

N(1)

8413(3)

6434(2)

3976(1)

58(1)

N(2)

6625(3)

6476(1)

3957(1)

50(1)

N(3)

3272(4)

3412(2)

-367(1)

65(1)

N(4)

1503(3)

3376(1)

-291(1)

54(1)

N(5)

3831(5)

-41(2)

609(1)

96(1)

C(1)

9162(4)

6355(2)

3518(1)

51(1)

198

C(2)

7801(4)

6342(2)

3170(1)

42(1)

C(3)

7801(3)

6280(2)

2603(1)

40(1)

C(4)

5984(3)

6057(1)

2399(1)

30(1)

C(5)

5908(3)

6209(1)

1820(1)

31(1)

C(6)

7362(3)

5842(2)

1513(1)

44(1)

C(7)

7357(3)

6033(2)

944(1)

44(1)

C(8)

5538(3)

5907(2)

712(1)

33(1)

C(9)

5202(4)

6205(2)

171(1)

47(1)

C(10)

3173(4)

6245(2)

150(1)

53(1)

C(11)

2495(4)

6255(2)

700(1)

46(1)

C(12)

4162(3)

6297(1)

1023(1)

32(1)

C(13)

4080(3)

6094(1)

1580(1)

30(1)

C(14)

2689(3)

6503(2)

1862(1)

40(1)

C(15)

2701(3)

6373(2)

2433(1)

41(1)

C(16)

4528(3)

6491(2)

2663(1)

32(1)

C(17)

4466(3)

6382(2)

3243(1)

41(1)

C(18)

6286(3)

6407(2)

3461(1)

40(1)

C(19)

5704(4)

5297(1)

2513(1)

42(1)

C(20)

5170(3)

5135(2)

699(1)

43(1)

C(21)

6033(5)

6898(2)

86(1)

77(1)

C(22)

3919(4)

3421(2)

100(1)

56(1)

C(23)

2640(4)

3399(2)

473(1)

43(1)

C(24)

2689(3)

3417(2)

1041(1)

40(1)

C(25)

894(3)

3646(1)

1267(1)

32(1)

C(26)

895(3)

3481(2)

1845(1)

34(1)

C(27)

2372(3)

3835(2)

2138(1)

47(1)

C(28)

2386(3)

3649(2)

2705(1)

47(1)

C(29)

608(3)

3801(2)

2951(1)

35(1)

C(30)

296(3)

3529(2)

3499(1)

42(1)

C(31)

-1733(3)

3447(2)

3532(1)

48(1)

C(32)

-2465(4)

3478(2)

2987(1)

41(1)

C(33)

-811(3)

3410(1)

2655(1)

33(1)

C(34)

-926(3)

3596(1)

2096(1)

31(1)

199

C(35)

-2326(3)

3182(2)

1824(1)

42(1)

C(36)

-2390(3)

3330(2)

1258(1)

43(1)

C(37)

-599(3)

3233(1)

1004(1)

37(1)

C(38)

-704(4)

3370(2)

432(1)

45(1)

C(39)

1073(4)

3375(2)

208(1)

41(1)

C(40)

648(4)

4412(1)

1169(1)

45(1)

C(41)

266(4)

4574(2)

2943(1)

48(1)

C(42)

1240(5)

2865(2)

3614(1)

66(1)

C(43)

5062(7)

-496(4)

813(2)

143(3)

Table 8.48 Bond lengths [] and angles [] for stanozolol formamide solvate.
Bond lengths []
O(1)-C(9)

1.437(4)

O(2)-C(30)

1.444(3)

O(3)-C(43)

1.113(5

N(1)-C(1)

1.341(4)

N(1)-N(2)

1.356(3)

N(2)-C(18)

1.338(3)

N(3)-C(22)

1.324(4

N(3)-N(4)

1.355(3)

N(4)-C(39)

1.355(3)

N(5)-C(43)

1.398(8)

C(1)-C(2)

1.378(4)

C(2)-C(18)

1.385(4)

C(2)-C(3)

1.500(3)

C(3)-C(4)

1.540(4)

C(4)-C(19)

1.537(4

C(4)-C(5)

1.555(3)

C(4)-C(16)

1.556(3)

C(5)-C(13)

1.537(3)

C(5)-C(6)

1.544(3)

C(6)-C(7)

1.543(3)

C(7)-C(8)

1.526(3)

C(8)-C(12)

1.531(4)

C(8)-C(20)

1.543(4

C(8)-C(9)

1.561(4)

C(9)-C(21)

1.516(4)

C(9)-C(10)

1.538(4)

C(10)-C(11)

1.536(4)

C(11)-C(12)

1.524(4)

C(12)-C(13)

1.521(3)

C(13)-C(14)

1.517(3)

C(14)-C(15)

1.525(3)

C(15)-C(16)

1.527(4)

C(16)-C(17)

1.545(3)

C(17)-C(18)

1.494(4)

C(22)-C(23)

1.379(4)

C(23)-C(39)

1.376(4)

C(23)-C(24)

1.498(4)

C(24)-C(25)

1.549(3)

C(25)-C(40)

1.537(4)

C(25)-C(37)

1.553(4)

C(25)-C(26)

1.557(3)

C(26)-C(27)

1.527(4)

200

C(26)-C(34)

1.545(3)

C(27)-C(28)

1.536(4)

C(28)-C(29)

1.522(4)

C(29)-C(33)

1.533(4)

C(29)-C(41)

1.541(4)

C(29)-C(30)

1.559(4)

C(30)-C(42)

1.517(4)

C(30)-C(31)

1.546(4)

C(31)-C(32)

1.541(4)

C(32)-C(33)

1.532(4)

C(33)-C(34)

1.519(3)

C(34)-C(35)

1.516(4)

C(35)-C(36)

1.520(3)

C(36)-C(37)

1.523(4)

C(37)-C(38)

1.532(3)

C(38)-C(39)

1.469(4)

Bond angles []
C(1)-N(1)-N(2)

113.3(2)

C(18)-N(2)-N(1)

102.7(2)

C(22)-N(3)-N(4)

103.3(3)

C(39)-N(4)-N(3)

112.3(2)

N(1)-C(1)-C(2)

106.5(3)

C(1)-C(2)-C(18)

104.4(2)

C(1)-C(2)-C(3)

131.6(3)

C(18)-C(2)-C(3)

124.0(2)

C(2)-C(3)-C(4)

111.8(2)

C(19)-C(4)-C(3)

109.3(2)

C(19)-C(4)-C(5)

111.9(2)

C(3)-C(4)-C(5)

108.7(2)

C(19)-C(4)-C(16)

110.3(2)

C(3)-C(4)-C(16)

108.7(2)

C(5)-C(4)-C(16)

107.9(2)

C(13)-C(5)-C(6)

110.97(19)

C(13)-C(5)-C(4)

114.06(19)

C(6)-C(5)-C(4)

113.4(2)

C(7)-C(6)-C(5)

113.1(2)

C(8)-C(7)-C(6)

110.6(2)

C(7)-C(8)-C(12)

108.5(2)

C(7)-C(8)-C(20)

109.4(2)

C(12)-C(8)-C(20)

112.4(2)

C(7)-C(8)-C(9)

116.9(2)

C(12)-C(8)-C(9)

101.0(2)

C(20)-C(8)-C(9)

108.6(2)

O(1)-C(9)-C(21)

108.3(3)

O(1)-C(9)-C(10)

111.8(3)

C(21)-C(9)-C(10)

111.3(3)

O(1)-C(9)-C(8)

109.2(2)

C(21)-C(9)-C(8)

113.8(3)

C(10)-C(9)-C(8)

102.3(2)

C(11)-C(10)-C(9)

107.5(2)

C(12)-C(11)-C(10)

104.6(2)

C(13)-C(12)-C(11)

119.4(2)

C(13)-C(12)-C(8)

114.4(2)

C(11)-C(12)-C(8)

103.68(19)

C(14)-C(13)-C(12)

111.2(2)

C(14)-C(13)-C(5)

110.2(2)

C(12)-C(13)-C(5)

108.68(19)

C(13)-C(14)-C(15)

112.9(2)

C(14)-C(15)-C(16)

111.8(2)

C(15)-C(16)-C(17)

110.1(2)

C(15)-C(16)-C(4)

112.4(2)

C(17)-C(16)-C(4)

112.8(2)

C(18)-C(17)-C(16)

110.4(2)

201

N(2)-C(18)-C(2)

113.0(2)

N(2)-C(18)-C(17)

123.8(2)

C(2)-C(18)-C(17)

123.2(2)

N(3)-C(22)-C(23)

113.6(3)

C(39)-C(23)-C(22)

104.2(2)

C(39)-C(23)-C(24)

121.9(2)

C(22)-C(23)-C(24)

133.9(3)

C(23)-C(24)-C(25)

111.6(2)

C(40)-C(25)-C(24)

109.1(2)

C(40)-C(25)-C(37)

110.4(2)

C(24)-C(25)-C(37)

108.4(2)

C(40)-C(25)-C(26)

111.6(2)

C(24)-C(25)-C(26)

108.3(2)

C(37)-C(25)-C(26)

109.0(2)

C(27)-C(26)-C(34)

111.7(2)

C(27)-C(26)-C(25)

113.6(2)

C(34)-C(26)-C(25)

112.8(2)

C(26)-C(27)-C(28)

112.8(2)

C(29)-C(28)-C(27)

111.1(2)

C(28)-C(29)-C(33)

107.8(2)

C(28)-C(29)-C(41)

109.6(2)

C(33)-C(29)-C(41)

111.6(2)

C(28)-C(29)-C(30)

117.5(2)

C(33)-C(29)-C(30)

101.2(2)

C(41)-C(29)-C(30)

109.0(2)

O(2)-C(30)-C(42)

107.8(2)

O(2)-C(30)-C(31)

106.1(2)

C(42)-C(30)-C(31)

111.5(3)

O(2)-C(30)-C(29)

113.3(2)

C(42)-C(30)-C(29)

114.0(2)

C(31)-C(30)-C(29)

103.8(2)

C(32)-C(31)-C(30)

107.5(2)

C(33)-C(32)-C(31)

103.6(2)

C(34)-C(33)-C(32)

119.0(2)

C(34)-C(33)-C(29)

114.4(2)

C(32)-C(33)-C(29)

103.8(2)

C(35)-C(34)-C(33)

111.7(2)

C(35)-C(34)-C(26)

110.0(2)

C(33)-C(34)-C(26)

109.2(2)

C(34)-C(35)-C(36)

112.5(2)

C(35)-C(36)-C(37)

112.2(2)

C(36)-C(37)-C(38)

111.2(2)

C(36)-C(37)-C(25)

112.7(2)

C(38)-C(37)-C(25)

112.6(2)

C(39)-C(38)-C(37)

110.4(2)

N(4)-C(39)-C(23)

106.5(2)

N(4)-C(39)-C(38)

127.6(2)

C(23)-C(39)-C(38)

125.8(2)

O(3)-C(43)-N(5)

121.1(8)

Table 8.49 Anisotropic displacement parameters (2 x 103) for stanozolol formamide


solvate. The anisotropic displacement factor exponent takes the form: -2 2 [h2 a*2
U11 + ... + 2 h k a* b* U12].
Atom

U11

U22

U33

U23

U13

U12

O(1)

67(1)

81(2)

30(1)

-4(1)

1(1)

15(1)

O(2)

59(1)

75(2)

33(1)

-14(1)

1(1)

-12(1)

O(3)

109(3)

204(5)

132(3)

15(3)

13(2)

35(3)

202

N(1)

64(2)

77(2)

34(2)

6(2)

-21(1)

-17(2)

N(2)

57(2)

66(2)

27(1)

-2(1)

-11(1)

-5(1)

N(3)

67(2)

83(2)

44(2)

2(2)

19(1)

6(2)

N(4)

59(2)

68(2)

35(2)

-1(1)

0(1)

7(1)

N(5)

80(2)

98(3)

110(3)

-2(2)

-36(2)

-1(2)

C(1)

51(2)

63(2)

40(2)

3(2)

-10(2)

-11(2)

C(2)

42(2)

49(2)

34(2)

2(1)

-10(1)

-8(1)

C(3)

34(2)

57(2)

28(2)

-2(1)

-4(1)

0(1)

C(4)

29(1)

35(2)

26(1)

-3(1)

-6(1)

2(1)

C(5)

29(1)

35(2)

27(1)

0(1)

-2(1)

-2(1)

C(6)

29(1)

67(2)

35(2)

-9(2)

-2(1)

3(2)

C(7)

37(2)

62(2)

33(2)

-4(2)

5(1)

-8(2)

C(8)

31(1)

43(2)

26(2)

-1(1)

-2(1)

-1(1)

C(9)

56(2)

52(2)

34(2)

1(2)

0(1)

-2(2)

C(10)

57(2)

70(3)

32(2)

-1(2)

-11(1)

13(2)

C(11)

45(2)

57(2)

37(2)

-4(2)

-3(1)

12(2)

C(12)

36(1)

31(2)

29(1)

0(1)

-3(1)

2(1)

C(13)

27(1)

34(2)

30(1)

-1(1)

-1(1)

-1(1)

C(14)

32(2)

52(2)

35(2)

-4(1)

-7(1)

10(2)

C(15)

33(1)

58(2)

32(2)

-5(1)

-4(1)

8(1)

C(16)

34(1)

37(2)

27(2)

0(1)

-2(1)

6(1)

C(17)

46(2)

49(2)

28(2)

-3(1)

3(1)

7(2)

C(18)

45(2)

45(2)

29(2)

1(1)

-6(1)

-2(1)

C(19)

49(2)

40(2)

36(2)

-1(1)

-7(1)

6(2)

C(20)

49(2)

45(2)

36(2)

-5(1)

-2(1)

3(1)

C(21)

120(3)

65(3)

46(2)

18(2)

3(2)

-22(2)

C(22)

46(2)

83(3)

39(2)

-5(2)

12(2)

12(2)

C(23)

40(2)

51(2)

37(2)

-3(1)

5(2)

8(2)

C(24)

37(2)

53(2)

30(2)

-5(1)

6(1)

1(2)

C(25)

28(1)

36(2)

32(1)

1(1)

4(1)

0(1)

C(26)

34(1)

39(2)

28(1)

0(1)

-1(1)

-1(1)

C(27)

26(1)

79(2)

37(2)

-5(2)

3(1)

-8(2)

C(28)

32(1)

73(2)

35(2)

-7(2)

-2(1)

-1(2)

203

C(29)

36(2)

41(2)

30(2)

1(1)

1(1)

0(1)

C(30)

50(2)

43(2)

32(2)

-4(2)

3(1)

7(2)

C(31)

52(2)

54(2)

38(2)

-7(2)

13(1)

-10(2)

C(32)

39(2)

45(2)

40(2)

3(1)

8(1)

-2(2)

C(33)

34(1)

34(2)

32(2)

6(1)

2(1)

4(1)

C(34)

26(1)

36(2)

31(1)

1(1)

5(1)

-1(1)

C(35)

29(1)

61(2)

36(2)

7(1)

1(1)

-4(2)

C(36)

32(1)

59(2)

36(2)

3(2)

-2(1)

-4(2)

C(37)

32(2)

44(2)

34(2)

4(1)

-3(1)

-1(1)

C(38)

47(2)

57(2)

30(2)

3(1)

-4(2)

2(2)

C(39)

51(2)

46(2)

25(2)

2(1)

8(1)

9(2)

C(40)

49(2)

43(2)

42(2)

0(1)

8(2)

2(1)

C(41)

50(2)

45(2)

49(2)

-4(2)

4(2)

-6(1)

C(42)

89(2)

69(3)

41(2)

12(2)

3(2)

26(2)

C(43)

76(4)

311(10)

41(3)

-41(4)

12(2)

-72(5)

Table 8.50 Hydrogen coordinates ( x 104) and isotropic displacement parameters (2


x 103) for stanozolol formamide solvate.
Atom

U(eq)

H(1O1)

5648

5884

-488

77

H(1O2)

1848

4069

3887

72

H(1N1)

9008

6456

4254

76

H(1N4)

740

3355

-533

70

H(1)

10363

6317

3449

67

H(3A)

8686

5950

2501

52

H(3B)

8116

6716

2455

52

H(5)

6150

6697

1784

40

H(6A)

8505

5955

1656

57

H(6B)

7199

5354

1545

57

H(7A)

7669

6509

906

57

H(7B)

8234

5764

766

57

H(10A)

2805

6654

-26

68

H(10B)

2699

5854

-29

68

204

H(11A)

1741

6647

758

60

H(11B)

1835

5844

776

60

H(12)

4530

6775

1018

41

H(13)

3782

5610

1603

39

H(14A)

1533

6389

1728

51

H(14B)

2890

6983

1801

51

H(15A)

2337

5908

2498

53

H(15B)

1856

6674

2596

53

H(16)

4827

6970

2605

42

H(17A)

3742

6733

3398

53

H(17B)

3933

5944

3317

53

H(19A)

6606

5036

2346

58

H(19B)

4565

5159

2390

58

H(19C)

5768

5223

2872

58

H(20A)

6111

4908

523

60

H(20B)

4073

5052

526

60

H(20C)

5095

4965

1040

60

H(21A)

7297

6855

90

108

H(21B)

5668

7202

351

108

H(21C)

5661

7074

-237

108

H(22)

5122

3439

170

73

H(24A)

3607

3728

1151

52

H(24B)

2980

2968

1169

52

H(26)

1133

2992

1872

44

H(27A)

2233

4324

2104

62

H(27B)

3500

3712

1990

62

H(28A)

2655

3169

2743

61

H(28B)

3303

3907

2876

61

H(31A)

-2030

3014

3688

62

H(31B)

-2237

3809

3736

62

H(32A)

-3284

3108

2924

53

H(32B)

-3061

3907

2925

53

H(33)

-469

2930

2668

43

205

H(34)

-1231

4079

2068

40

H(35A)

-3472

3281

1972

55

H(35B)

-2087

2701

1874

55

H(36A)

-2781

3795

1206

55

H(36B)

-3245

3031

1099

55

H(37)

-292

2751

1043

48

H(38A)

-1412

3020

271

58

H(38B)

-1272

3805

374

58

H(40A)

1535

4662

1351

62

H(40B)

-502

4550

1283

62

H(40C)

759

4502

812

62

H(41A)

1243

4806

3098

67

H(41B)

-797

4673

3127

67

H(41C)

140

4725

2598

67

H(42A)

2491

2944

3629

93

H(42B)

989

2541

3350

93

H(42C)

838

2689

3933

93

206

11) Stanozolol pyridine solvate.

Table 8.51 Crystal data and structure refinement for stanozolol pyridine solvate.
Identification code

stanozolol_11

Empirical formula

C47 H69 N5 O2

Formula weight

736.07

Temperature

298(2) K

Wavelength

0.7107

Crystal system

Orthorhombic

Space group

P212121

Unit cell dimensions

a = 7.233(2)
b = 11.850(2)
c = 48.672(2)

Volume

4171.8(14) 3

Density (calculated)

1.172 Mg/m3

Absorption coefficient

0.072 mm-1

F(000)

1608

Crystal size

0.55 x 0.45 x 0.25 mm

Theta range for data collection

2.9237 to 27.8887

Index ranges

-8<=h<=9; -15<=k<=15; -42<=l<=62

Reflections collected

12520

Independent reflections

6556 [Rint = 0.0251]


207

Reflections observed (>2)

4847

Data Completeness

0.998

Absorption correction

Semi-empirical from equivalents

Max. and min. transmission

1.00000 and 0.79858

Refinement method

Full-matrix least-squares on F2

Data / restraints / parameters

6556 / 0 / 493

Goodness-of-fit on F2

1.085

Final R indices [I>2(I)]

R1 = 0.0679 wR2 = 0.1132

R indices (all data)

R1 = 0.0962 wR2 = 0.1223

Absolute structure parameter

0(2)

Largest diff. peak and hole

0.153 and -0.157 e.-3

Table 8.52 Atomic coordinates ( x 104) and equivalent isotropic displacement


parameters (2 x 103) for stanozolol pyridine solvate. U(eq) is defined as one third of
the trace of the orthogonalized Uij tensor.
Atom

U(eq)

O(1)

6053(3)

4273(2)

1245(1)

49(1)

O(2)

11405(4)

1088(2)

3770(1)

60(1)

N(1)

12852(5)

3472(3)

3317(1)

66(1)

N(2)

11462(4)

2710(3)

3334(1)

53(1)

N(3)

8534(6)

-2510(3)

5857(1)

68(1)

N(4)

7064(6)

-1832(3)

5814(1)

67(1)

C(1)

12703(6)

4069(4)

3085(1)

61(1)

C(2)

11169(5)

3694(3)

2946(1)

44(1)

C(3)

10349(5)

4029(3)

2675(1)

48(1)

C(4)

9134(4)

3082(2)

2555(1)

32(1)

C(5)

8018(5)

3560(3)

2310(1)

34(1)

C(6)

9212(5)

4111(3)

2087(1)

43(1)

C(7)

8074(5)

4611(3)

1851(1)

44(1)

C(8)

6823(4)

3716(3)

1728(1)

36(1)

C(9)

5328(5)

4129(3)

1519(1)

41(1)

C(10)

3923(5)

3161(3)

1521(1)

56(1)

C(11)

4180(5)

2516(4)

1795(1)

56(1)

208

C(12)

5596(4)

3229(3)

1953(1)

37(1)

C(13)

6646(4)

2696(3)

2191(1)

35(1)

C(14)

5352(5)

2283(4)

2418(1)

50(1)

C(15)

6372(5)

1848(3)

2668(1)

50(1)

C(16)

7787(5)

2678(3)

2779(1)

38(1)

C(17)

8766(5)

2186(3)

3033(1)

46(1)

C(18)

10437(5)

2847(3)

3107(1)

44(1)

C(19)

10385(5)

2114(3)

2462(1)

45(1)

C(20)

8006(5)

2809(3)

1588(1)

47(1)

C(21)

4441(6)

5253(3)

1594(1)

65(1)

C(22)

9843(7)

-2324(3)

5671(1)

59(1)

C(23)

9250(6)

-1490(3)

5498(1)

48(1)

C(24)

10092(5)

-921(3)

5251(1)

46(1)

C(25)

8587(5)

-493(3)

5057(1)

35(1)

C(26)

9465(5)

242(3)

4825(1)

36(1)

C(27)

10951(5)

-388(3)

4659(1)

49(1)

C(28)

11755(5)

316(3)

4422(1)

47(1)

C(29)

10231(5)

770(3)

4237(1)

37(1)

C(30)

10783(5)

1648(3)

4015(1)

44(1)

C(31)

8989(5)

2286(3)

3958(1)

59(1)

C(32)

7714(6)

2106(4)

4209(1)

67(1)

C(33)

8932(5)

1486(3)

4417(1)

43(1)

C(34)

7997(5)

821(3)

4645(1)

39(1)

C(35)

6742(5)

1551(3)

4820(1)

58(1)

C(36)

5843(5)

876(3)

5048(1)

57(1)

C(37)

7247(5)

252(3)

5225(1)

43(1)

C(38)

6234(5)

-400(3)

5456(1)

56(1)

C(39)

7505(6)

-1217(3)

5592(1)

51(1)

C(40)

7576(6)

-1515(3)

4937(1)

57(1)

C(41)

9221(6)

-212(3)

4098(1)

59(1)

C(42)

12309(6)

2441(4)

4102(1)

72(1)

C(43)

2316(8)

352(4)

6528(1)

80(1)

C(44)

3879(8)

-206(5)

6457(1)

96(2)

209

N(5)

869(6)

505(4)

6360(1)

83(1)

C(46)

1071(7)

48(4)

6109(1)

80(1)

C(45)

4044(7)

-653(4)

6200(1)

79(1)

C(47)

2643(8)

-520(4)

6031(1)

81(1)

Table 8.53 Bond lengths [] and angles [] for stanozolol pyridine solvate.
Bond lengths []
O(1)-C(9)

1.441(4)

O(2)-C(30)

1.438(4)

N(1)-C(1)

1.336(4)

N(1)-N(2)

1.354(4)

N(2)-C(18)

1.339(4)

N(3)-C(22)

1.329(5)

N(3)-N(4)

1.350(5)

N(4)-C(39)

1.339(4)

C(1)-C(2)

1.374(5)

C(2)-C(18)

1.380(5)

C(2)-C(3)

1.500(4)

C(3)-C(4)

1.541(4)

C(4)-C(19)

1.530(4)

C(4)-C(16)

1.539(4)

C(4)-C(5)

1.547(4)

C(5)-C(6)

1.533(4)

C(5)-C(13)

1.539(4

C(6)-C(7)

1.533(4)

C(7)-C(8)

1.517(4)

C(8)-C(12)

1.525(4)

C(8)-C(20)

1.532(4

C(8)-C(9)

1.564(4)

C(9)-C(21)

1.523(5)

C(9)-C(10)

1.532(5)

C(10)-C(11)

1.547(5)

C(11)-C(12)

1.535(4)

C(12)-C(13)

1.520(4)

C(13)-C(14)

1.528(4)

C(14)-C(15)

1.516(5)

C(15)-C(16)

1.519(5)

C(16)-C(17)

1.540(4)

C(17)-C(18)

1.484(5)

C(22)-C(23)

1.369(5)

C(23)-C(39)

1.382(5)

C(23)-C(24)

1.505(4)

C(24)-C(25)

1.529(4)

C(25)-C(40)

1.531(4)

C(25)-C(37)

1.545(4)

C(25)-C(26)

1.559(4)

C(26)-C(34)

1.540(4)

C(26)-C(27)

1.540(4)

C(27)-C(28)

1.536(4)

C(28)-C(29)

1.521(4)

C(29)-C(41)

1.531(5)

C(29)-C(33)

1.539(5)

C(29)-C(30)

1.552(4)

C(30)-C(42)

1.510(5)

C(30)-C(31)

1.528(5)

C(31)-C(32)

1.545(5)

C(32)-C(33)

1.530(5)

C(33)-C(34)

1.518(4)

C(34)-C(35)

1.518(5)

210

C(35)-C(36)

1.516(5)

C(36)-C(37)

1.522(5)

C(37)-C(38)

1.547(5)

C(38)-C(39)

1.492(5)

C(43)-N(5)

1.339(6)

C(43)-C(44)

1.354(7)

C(44)-C(45)

1.362(7

N(5)-C(46)

1.344(6)

C(46)-C(47)

1.375(6)

C(45)-C(47)

1.316(6)

Bond angles []
C(1)-N(1)-N(2)

110.2(3)

C(18)-N(2)-N(1)

106.2(3)

C(22)-N(3)-N(4)

110.8(3)

C(39)-N(4)-N(3)

105.3(3)

N(1)-C(1)-C(2)

108.0(3)

C(1)-C(2)-C(18)

105.4(3)

C(1)-C(2)-C(3)

131.8(3)

C(18)-C(2)-C(3)

122.7(3)

C(2)-C(3)-C(4)

111.5(3)

C(19)-C(4)-C(16)

110.6(2)

C(19)-C(4)-C(3)

108.7(3)

C(16)-C(4)-C(3)

108.6(3)

C(19)-C(4)-C(5)

110.8(3)

C(16)-C(4)-C(5)

109.3(3)

C(3)-C(4)-C(5)

108.9(2)

C(6)-C(5)-C(13)

112.3(2)

C(6)-C(5)-C(4)

114.1(3)

C(13)-C(5)-C(4)

112.5(3)

C(5)-C(6)-C(7)

113.2(3)

C(8)-C(7)-C(6)

110.2(3)

C(7)-C(8)-C(12)

109.1(3)

C(7)-C(8)-C(20)

109.4(3)

C(12)-C(8)-C(20)

112.3(3)

C(7)-C(8)-C(9)

116.8(3)

C(12)-C(8)-C(9)

100.7(2)

C(20)-C(8)-C(9)

108.5(3)

O(1)-C(9)-C(21)

105.7(3)

O(1)-C(9)-C(10)

109.8(3)

C(21)-C(9)-C(10)

111.9(3)

O(1)-C(9)-C(8)

112.8(3)

C(21)-C(9)-C(8)

114.1(3)

C(10)-C(9)-C(8)

102.6(3)

C(9)-C(10)-C(11)

107.3(3)

C(12)-C(11)-C(10)

104.0(3)

C(13)-C(12)-C(8)

114.4(3)

C(13)-C(12)-C(11)

119.1(3)

C(8)-C(12)-C(11)

103.6(2)

C(12)-C(13)-C(14)

112.1(3)

C(12)-C(13)-C(5)

109.4(3)

C(14)-C(13)-C(5)

109.6(3)

C(15)-C(14)-C(13)

113.1(3)

C(14)-C(15)-C(16)

113.2(3)

C(15)-C(16)-C(4)

112.0(3)

C(15)-C(16)-C(17)

110.5(3)

C(4)-C(16)-C(17)

113.4(3)

C(18)-C(17)-C(16)

111.7(3)

N(2)-C(18)-C(2)

110.1(3)

N(2)-C(18)-C(17)

125.9(3)

C(2)-C(18)-C(17)

123.9(3)

N(3)-C(22)-C(23)

108.5(4)

C(22)-C(23)-C(39)

104.5(3)

C(22)-C(23)-C(24)

133.5(4)

211

C(39)-C(23)-C(24)

122.0(3)

C(23)-C(24)-C(25)

110.7(3)

C(24)-C(25)-C(40)

108.3(3)

C(24)-C(25)-C(37)

108.0(3)

C(40)-C(25)-C(37)

110.8(3)

C(24)-C(25)-C(26)

110.0(3)

C(40)-C(25)-C(26)

111.1(2)

C(37)-C(25)-C(26)

108.6(2)

C(34)-C(26)-C(27)

113.3(2)

C(34)-C(26)-C(25)

112.4(3)

C(27)-C(26)-C(25)

113.3(3)

C(28)-C(27)-C(26)

113.4(3)

C(29)-C(28)-C(27)

111.1(3)

C(28)-C(29)-C(41)

109.8(3)

C(28)-C(29)-C(33)

107.6(3)

C(41)-C(29)-C(33)

112.2(3)

C(28)-C(29)-C(30)

117.5(3)

C(41)-C(29)-C(30)

109.0(3)

C(33)-C(29)-C(30)

100.6(3)

O(2)-C(30)-C(42)

106.9(3)

O(2)-C(30)-C(31)

110.0(3)

C(42)-C(30)-C(31)

111.4(3)

O(2)-C(30)-C(29)

110.4(3)

C(42)-C(30)-C(29)

114.2(3)

C(31)-C(30)-C(29)

103.9(3)

C(30)-C(31)-C(32)

107.1(3)

C(33)-C(32)-C(31)

104.3(3)

C(34)-C(33)-C(32)

118.4(3)

C(34)-C(33)-C(29)

113.7(3)

C(32)-C(33)-C(29)

103.9(3)

C(33)-C(34)-C(35)

112.4(3)

C(33)-C(34)-C(26)

110.0(3)

C(35)-C(34)-C(26)

110.2(3)

C(36)-C(35)-C(34)

111.6(3)

C(35)-C(36)-C(37)

112.6(3)

C(36)-C(37)-C(25)

113.4(3)

C(36)-C(37)-C(38)

109.7(3)

C(25)-C(37)-C(38)

113.3(3)

C(39)-C(38)-C(37)

110.8(3)

N(4)-C(39)-C(23)

111.0(4)

N(4)-C(39)-C(38)

124.4(4)

C(23)-C(39)-C(38)

124.5(3)

N(5)-C(43)-C(44)

124.3(5)

C(43)-C(44)-C(45)

119.8(5)

C(43)-N(5)-C(46)

114.5(4)

N(5)-C(46)-C(47)

122.6(5)

C(47)-C(45)-C(44)

117.4(5)

C(45)-C(47)-C(46)

121.5(5)

Table 8.54 Anisotropic displacement parameters (2 x 103) for stanozolol pyridine


solvate. The anisotropic displacement factor exponent takes the form: -2 2 [h2 a*2
U11 + ... + 2 h k a* b* U12].
Atom

U11

U22

U33

U23

U13

U12

O(1)

64(2)

54(1)

30(1)

-10(1)

-2(1)

-5(1)

O(2)

93(2)

55(2)

32(1)

17(1)

14(2)

15(2)

N(1)

60(2)

92(3)

44(2)

17(2)

-22(2)

-19(2)

N(2)

54(2)

60(2)

46(2)

18(2)

-9(2)

-7(2)

212

N(3)

103(3)

58(2)

44(2)

21(2)

8(2)

5(2)

N(4)

85(3)

66(2)

49(2)

19(2)

15(2)

10(2)

C(1)

60(3)

76(3)

46(2)

24(2)

-16(2)

-20(2)

C(2)

50(2)

43(2)

40(2)

10(2)

-12(2)

-5(2)

C(3)

58(2)

41(2)

44(2)

16(2)

-15(2)

-11(2)

C(4)

36(2)

27(2)

34(2)

5(2)

-2(2)

-2(2)

C(5)

36(2)

32(2)

34(2)

0(2)

-4(2)

-1(2)

C(6)

45(2)

46(2)

39(2)

10(2)

-8(2)

-18(2)

C(7)

55(2)

43(2)

34(2)

5(2)

-11(2)

-6(2)

C(8)

36(2)

38(2)

34(2)

-8(2)

-2(2)

2(2)

C(9)

48(2)

51(2)

25(2)

-9(2)

-5(2)

8(2)

C(10)

41(2)

81(3)

46(2)

-12(2)

-9(2)

-7(2)

C(11)

42(2)

84(3)

42(2)

-10(2)

0(2)

-18(2)

C(12)

29(2)

45(2)

38(2)

-9(2)

-1(2)

3(2)

C(13)

32(2)

36(2)

38(2)

-5(2)

2(2)

-2(2)

C(14)

32(2)

68(3)

49(2)

8(2)

0(2)

-11(2)

C(15)

45(2)

57(2)

47(2)

7(2)

8(2)

-11(2)

C(16)

41(2)

37(2)

35(2)

4(2)

4(2)

2(2)

C(17)

58(2)

42(2)

38(2)

9(2)

6(2)

2(2)

C(18)

46(2)

45(2)

42(2)

11(2)

-4(2)

2(2)

C(19)

38(2)

47(2)

49(2)

7(2)

1(2)

9(2)

C(20)

44(2)

51(2)

46(2)

-3(2)

6(2)

2(2)

C(21)

73(3)

77(3)

44(2)

-11(2)

-14(2)

37(3)

C(22)

82(3)

59(2)

37(2)

8(2)

8(2)

13(2)

C(23)

66(3)

47(2)

30(2)

5(2)

3(2)

6(2)

C(24)

56(2)

50(2)

30(2)

9(2)

6(2)

8(2)

C(25)

46(2)

32(2)

29(2)

-3(2)

1(2)

0(2)

C(26)

43(2)

35(2)

29(2)

-1(2)

-2(2)

2(2)

C(27)

55(2)

59(2)

34(2)

11(2)

1(2)

20(2)

C(28)

47(2)

59(2)

34(2)

11(2)

8(2)

13(2)

C(29)

43(2)

39(2)

29(2)

8(2)

-4(2)

2(2)

C(30)

49(2)

49(2)

35(2)

6(2)

0(2)

3(2)

C(31)

61(2)

61(2)

54(2)

25(2)

-1(2)

12(2)

213

C(32)

61(3)

81(3)

60(2)

40(2)

8(2)

28(3)

C(33)

43(2)

43(2)

43(2)

11(2)

-1(2)

4(2)

C(34)

38(2)

41(2)

39(2)

7(2)

-3(2)

3(2)

C(35)

56(2)

60(2)

57(2)

18(2)

12(2)

18(2)

C(36)

49(2)

64(2)

58(2)

17(2)

15(2)

13(2)

C(37)

44(2)

43(2)

41(2)

4(2)

8(2)

0(2)

C(38)

54(2)

65(2)

47(2)

8(2)

17(2)

5(2)

C(39)

67(3)

49(2)

37(2)

11(2)

8(2)

5(2)

C(40)

83(3)

46(2)

40(2)

-1(2)

2(2)

-13(2)

C(41)

87(3)

56(2)

36(2)

4(2)

-6(2)

-11(2)

C(42)

71(3)

85(3)

59(2)

18(3)

4(2)

-23(3)

C(43)

95(4)

85(4)

58(3)

-4(3)

7(3)

-25(3)

C(44)

77(4)

101(4)

110(5)

46(4)

-15(4)

-14(4)

N(5)

75(3)

100(3)

74(3)

-7(3)

18(2)

-9(3)

C(46)

63(3)

106(4)

72(3)

10(3)

2(3)

-10(3)

C(45)

58(3)

67(3)

112(4)

18(3)

22(3)

6(3)

C(47)

80(4)

86(3)

78(3)

-11(3)

22(3)

-9(3)

Table 8.55 Hydrogen coordinates ( x 104) and isotropic displacement parameters (2


x 103) for stanozolol pyridine solvate.
Atom

U(eq)

H(1O1)

6816

4785

1245

64

H(1O2)

11604

1558

3650

78

H(1N1)

13708

3558

3437

85

H(1N3)

8612

-2997

5988

89

H(1)

13499

4640

3028

79

H(3A)

11336

4203

2547

62

H(3B)

9608

4704

2699

62

H(5)

7258

4168

2386

44

H(6A)

10056

3552

2013

56

H(6B)

9947

4706

2170

56

H(7A)

7332

5233

1918

57

H(7B)

8898

4900

1710

57

214

H(10A)

4135

2660

1367

73

H(10B)

2675

3456

1508

73

H(11A)

3022

2466

1895

73

H(11B)

4647

1760

1763

73

H(12)

4910

3867

2031

49

H(13)

7346

2049

2120

46

H(14A)

4550

2899

2473

64

H(14B)

4578

1685

2345

64

H(15A)

6995

1150

2621

65

H(15B)

5481

1680

2811

65

H(16)

7100

3344

2841

49

H(17A)

7915

2185

3187

60

H(17B)

9118

1411

2996

60

H(19A)

9640

1505

2394

58

H(19B)

11110

1855

2614

58

H(19C)

11192

2375

2318

58

H(20A)

8699

2406

1725

61

H(20B)

8841

3160

1461

61

H(20C)

7218

2292

1491

61

H(21A)

5355

5839

1586

84

H(21B)

3943

5210

1776

84

H(21C)

3465

5418

1466

84

H(22)

10972

-2697

5661

77

H(24A)

10880

-1451

5155

59

H(24B)

10851

-292

5311

59

H(26)

10117

854

4920

46

H(27A)

11947

-607

4781

64

H(27B)

10414

-1072

4584

64

H(28A)

12460

941

4497

61

H(28B)

12589

-148

4314

61

H(31A)

8406

1999

3793

76

H(31B)

9239

3084

3933

76

H(32A)

7294

2822

4282

88

215

H(32B)

6646

1654

4160

88

H(33)

9701

2059

4506

56

H(34)

7239

232

4559

51

H(35A)

7457

2162

4900

75

H(35B)

5788

1881

4705

75

H(36A)

4995

333

4968

74

H(36B)

5131

1381

5164

74

H(37)

8002

829

5315

55

H(38A)

5767

130

5591

72

H(38B)

5189

-803

5378

72

H(40A)

6559

-1262

4826

73

H(40B)

7120

-1979

5084

73

H(40C)

8415

-1945

4826

73

H(41A)

10070

-618

3984

77

H(41B)

8227

77

3988

77

H(41C)

8733

-709

4236

77

H(42A)

13440

2025

4123

93

H(42B)

11989

2787

4274

93

H(42C)

12470

3013

3965

93

H(43)

2243

649

6704

104

H(44)

4837

-283

6583

125

H(46)

111

120

5983

104

H(45)

5106

-1038

6147

102

H(47)

2718

-816

5854

106

216

12) Stanozolol DMF hydrate solvate.

Table 8.56 Crystal data and structure refinement for stanozolol DMF hydrate solvate.
Identification code

stanozolol_12

Empirical formula

C45 H73 N5 O4

Formula weight

748.08

Temperature

298(2) K

Wavelength

0.7107

Crystal system

Monoclinic

Space group

P21

Unit cell dimensions

a = 10.4243(10)
b = 7.4432(5), = 94.069(9)
c = 27.018(2)

Volume

2091.1(3) 3

Density (calculated)

1.188 Mg/m3

Absorption coefficient

0.076 mm-1

F(000)

820

Crystal size

0.20 x 0.06 x 0.06 mm

Theta range for data collection

3.0189 to 29.0783

Index ranges

-14<=h<=12; -5<=k<=9; -36<=l<=20

Reflections collected

9056
217

Independent reflections

5784 [Rint = 0.0169]

Reflections observed (>2)

4640

Data Completeness

0.998

Absorption correction

Semi-empirical from equivalents

Max. and min. transmission

1.00000 and 0.97696

Refinement method

Full-matrix least-squares on F2

Data / restraints / parameters

5784 / 1 / 503

Goodness-of-fit on F2

1.025

Final R indices [I>2(I)]

R1 = 0.0493 wR2 = 0.1208

R indices (all data)

R1 = 0.0668 wR2 = 0.1327

Absolute structure parameter

0.2(17)

Largest diff. peak and hole

0.351 and -0.318 e.-3

Table 8.57 Atomic coordinates ( x 104) and equivalent isotropic displacement


parameters (2 x 103) for stanozolol DMF hydrate solvate. U(eq) is defined as one
third of the trace of the orthogonalized Uij tensor.
Atom

U(eq)

O(1)

1843(2)

1864(4)

1985(1)

56(1)

O(2)

1359(2)

521(3)

2935(1)

51(1)

O(3)

11709(5)

5502(5)

2138(2)

141(2)

O(4)

5199(5)

1126(5)

7493(1)

79(1)

N(1)

3096(3)

4978(4)

-2059(1)

53(1)

N(2)

3377(3)

3219(4)

-2032(1)

55(1)

N(3)

3341(3)

-3065(4)

7001(1)

48(1)

N(4)

3682(3)

-1326(4)

6952(1)

47(1)

N(5)

9869(4)

5863(5)

2541(1)

68(1)

C(1)

2745(4)

5654(5)

-1631(1)

48(1)

C(2)

2810(3)

4273(5)

-1292(1)

40(1)

C(3)

2612(3)

4202(4)

-745(1)

37(1)

C(4)

2422(3)

2263(4)

-558(1)

33(1)

C(5)

2682(3)

2242(4)

15(1)

31(1)

C(6)

1854(3)

3564(5)

289(1)

43(1)

C(7)

2225(3)

3598(4)

853(1)

42(1)

218

C(8)

2150(3)

1725(4)

1078(1)

34(1)

C(9)

2730(3)

1454(5)

1619(1)

45(1)

C(10)

3011(4)

-574(5)

1643(1)

61(1)

C(11)

3054(4)

-1265(5)

1107(1)

55(1)

C(12)

3005(3)

453(4)

795(1)

35(1)

C(13)

2662(3)

339(4)

240(1)

34(1)

C(14)

3604(4)

-887(5)

-7(1)

46(1)

C(15)

3410(4)

-886(5)

-570(1)

46(1)

C(16)

3437(3)

1015(4)

-782(1)

38(1)

C(17)

3335(4)

951(5)

-1349(1)

53(1)

C(18)

3200(3)

2804(5)

-1559(1)

45(1)

C(19)

1044(3)

1651(5)

-724(1)

46(1)

C(20)

745(3)

1108(5)

1049(1)

52(1)

C(21)

3945(4)

2541(7)

1744(1)

67(1)

C(22)

2918(3)

-3569(5)

6549(1)

44(1)

C(23)

2988(3)

-2175(5)

6203(1)

37(1)

C(24)

2703(3)

-2066(4)

5652(1)

37(1)

C(25)

2533(3)

-101(4)

5468(1)

32(1)

C(26)

2675(3)

-35(4)

4897(1)

33(1)

C(27)

1767(4)

-1277(5)

4590(1)

45(1)

C(28)

2003(4)

-1260(5)

4035(1)

46(1)

C(29)

1902(3)

654(4)

3824(1)

34(1)

C(30)

2371(3)

960(5)

3297(1)

43(1)

C(31)

2689(4)

2994(6)

3300(1)

59(1)

C(32)

2890(4)

3588(5)

3846(1)

59(1)

C(33)

2869(3)

1834(4)

4139(1)

36(1)

C(34)

2642(3)

1899(4)

4690(1)

34(1)

C(35)

3655(4)

3067(5)

4967(1)

46(1)

C(36)

3590(4)

2985(5)

5527(1)

47(1)

C(37)

3627(3)

1080(4)

5720(1)

38(1)

C(38)

3677(4)

1094(5)

6292(1)

46(1)

C(39)

3472(3)

-767(5)

6477(1)

39(1)

C(40)

1201(3)

557(5)

5601(1)

45(1)

219

C(41)

529(3)

1336(6)

3833(1)

51(1)

C(42)

3547(4)

-142(7)

3185(1)

70(1)

C(43)

9204(5)

6970(8)

2888(2)

91(2)

C(44)

9299(5)

4169(8)

2403(2)

95(2)

C(45)

10995(7)

6376(7)

2396(2)

115(2)

Table 8.58 Bond lengths [] and angles [] for stanozolol DMF hydrate solvate.
Bond lengths []
O(1)-C(9)

1.434(4)

O(2)-C(30)

1.425(4)

O(3)-C(45)

1.239(6

N(1)-C(1)

1.336(4)

N(1)-N(2)

1.343(4)

N(2)-C(18)

1.339(4)

N(3)-C(22)

1.324(4

N(3)-N(4)

1.351(4)

N(4)-C(39)

1.354(4)

N(5)-C(45)

1.321(6)

N(5)-C(44)

1.432(6)

N(5)-C(43)

1.459(6)

C(1)-C(2)

1.376(4)

C(2)-C(18)

1.387(5)

C(2)-C(3)

1.505(4)

C(3)-C(4)

1.547(4)

C(4)-C(19)

1.543(4

C(4)-C(5)

1.553(4)

C(4)-C(16)

1.561(4

C(5)-C(6)

1.535(4)

C(5)-C(13)

1.543(4

C(6)-C(7)

1.545(4)

C(7)-C(8)

1.525(4)

C(8)-C(20)

1.532(4)

C(8)-C(12)

1.539(4

C(8)-C(9)

1.556(4)

C(9)-C(21)

1.521(5)

C(9)-C(10)

1.538(5)

C(10)-C(11)

1.540(5)

C(11)-C(12)

1.531(5)

C(12)-C(13)

1.520(4)

C(13)-C(14)

1.529(4)

C(14)-C(15)

1.521(4)

C(15)-C(16)

1.526(4)

C(16)-C(17)

1.528(4)

C(17)-C(18)

1.495(5)

C(22)-C(23)

1.403(4)

C(23)-C(39)

1.360(5)

C(23)-C(24)

1.499(4)

C(24)-C(25)

1.550(4)

C(25)-C(40)

1.539(4)

C(25)-C(37)

1.557(4)

C(25)-C(26)

1.563(4)

C(26)-C(27)

1.525(4)

C(26)-C(34)

1.543(4)

C(27)-C(28)

1.536(4)

C(28)-C(29)

1.535(5)

C(29)-C(41)

1.520(4)

C(29)-C(33)

1.546(4)

C(29)-C(30)

1.556(4)

220

C(30)-C(42)

1.523(5)

C(30)-C(31)

1.549(5)

C(31)-C(32)

1.541(5)

C(32)-C(33)

1.527(5)

C(33)-C(34)

1.525(4)

C(34)-C(35)

1.523(4)

C(35)-C(36)

1.521(4)

C(36)-C(37)

1.510(5)

C(37)-C(38)

1.542(4)

C(38)-C(39)

1.493(5)

Bond angles []
C(1)-N(1)-N(2)

113.1(3)

C(18)-N(2)-N(1)

103.5(3)

C(22)-N(3)-N(4)

104.7(3)

N(3)-N(4)-C(39)

111.2(3)

C(45)-N(5)-C(44)

122.5(4)

C(45)-N(5)-C(43)

120.1(4)

C(44)-N(5)-C(43)

117.2(4)

N(1)-C(1)-C(2)

107.0(3)

C(1)-C(2)-C(18)

104.1(3)

C(1)-C(2)-C(3)

132.5(3)

C(18)-C(2)-C(3)

123.3(3)

C(2)-C(3)-C(4)

112.5(3)

C(19)-C(4)-C(3)

108.6(2)

C(19)-C(4)-C(5)

112.3(2)

C(3)-C(4)-C(5)

108.5(2)

C(19)-C(4)-C(16)

110.8(3)

C(3)-C(4)-C(16)

108.9(2)

C(5)-C(4)-C(16)

107.7(2)

C(6)-C(5)-C(13)

112.0(2)

C(6)-C(5)-C(4)

114.3(2)

C(13)-C(5)-C(4)

113.4(2)

C(5)-C(6)-C(7)

112.2(3)

C(8)-C(7)-C(6)

111.2(3)

C(7)-C(8)-C(20)

109.2(3)

C(7)-C(8)-C(12)

108.5(2)

C(20)-C(8)-C(12)

112.1(3)

C(7)-C(8)-C(9)

117.7(3)

C(20)-C(8)-C(9)

108.4(2)

C(12)-C(8)-C(9)

100.8(3)

O(1)-C(9)-C(21)

107.5(3)

O(1)-C(9)-C(10)

108.1(3)

C(21)-C(9)-C(10)

111.1(3)

O(1)-C(9)-C(8)

113.2(3)

C(21)-C(9)-C(8)

113.7(3)

C(10)-C(9)-C(8)

103.1(3)

C(9)-C(10)-C(11)

107.9(3)

C(12)-C(11)-C(10)

103.7(3)

C(13)-C(12)-C(11)

119.5(3)

C(13)-C(12)-C(8)

114.8(2)

C(11)-C(12)-C(8)

103.8(2)

C(12)-C(13)-C(14)

110.6(3)

C(12)-C(13)-C(5)

109.2(2)

C(14)-C(13)-C(5)

110.4(2)

C(15)-C(14)-C(13)

113.1(3)

C(14)-C(15)-C(16)

111.7(3)

C(15)-C(16)-C(17)

110.1(3)

C(15)-C(16)-C(4)

112.1(3)

C(17)-C(16)-C(4)

113.9(3)

C(18)-C(17)-C(16)

110.6(3)

N(2)-C(18)-C(2)

112.4(3)

N(2)-C(18)-C(17)

124.1(3)

C(2)-C(18)-C(17)

123.5(3)

221

N(3)-C(22)-C(23)

112.1(3)

C(39)-C(23)-C(22)

104.0(3)

C(39)-C(23)-C(24)

122.6(3)

C(22)-C(23)-C(24)

133.3(3)

C(23)-C(24)-C(25)

112.2(3)

C(40)-C(25)-C(24)

108.0(3)

C(40)-C(25)-C(37)

111.3(3)

C(24)-C(25)-C(37)

109.3(2)

C(40)-C(25)-C(26)

111.8(2)

C(24)-C(25)-C(26)

109.2(2)

C(37)-C(25)-C(26)

107.3(2)

C(27)-C(26)-C(34)

111.8(2)

C(27)-C(26)-C(25)

114.8(2)

C(34)-C(26)-C(25)

112.7(2)

C(26)-C(27)-C(28)

112.9(3)

C(29)-C(28)-C(27)

111.0(3)

C(41)-C(29)-C(28)

110.2(3)

C(41)-C(29)-C(33)

112.3(3)

C(28)-C(29)-C(33)

107.3(2)

C(41)-C(29)-C(30)

108.8(2)

C(28)-C(29)-C(30)

117.3(3)

C(33)-C(29)-C(30)

100.7(2)

O(2)-C(30)-C(42)

107.9(3)

O(2)-C(30)-C(31)

112.1(3)

C(42)-C(30)-C(31)

110.7(3)

O(2)-C(30)-C(29)

109.2(3)

C(42)-C(30)-C(29)

114.4(3)

C(31)-C(30)-C(29)

102.6(3)

C(32)-C(31)-C(30)

107.5(3)

C(33)-C(32)-C(31)

104.1(3)

C(34)-C(33)-C(32)

119.2(3)

C(34)-C(33)-C(29)

114.5(2)

C(32)-C(33)-C(29)

103.5(2)

C(35)-C(34)-C(33)

110.3(2)

C(35)-C(34)-C(26)

111.0(3)

C(33)-C(34)-C(26)

108.8(2)

C(36)-C(35)-C(34)

112.8(3)

C(37)-C(36)-C(35)

112.4(3)

C(36)-C(37)-C(38)

109.8(3)

C(36)-C(37)-C(25)

112.3(3)

C(38)-C(37)-C(25)

114.4(3)

C(39)-C(38)-C(37)

109.5(3)

N(4)-C(39)-C(23)

108.0(3)

N(4)-C(39)-C(38)

125.9(3)

C(23)-C(39)-C(38)

126.1(3)

O(3)-C(45)-N(5)

126.7(5)

Table 8.59 Anisotropic displacement parameters (2 x 103) for stanozolol DMF


hydrate solvate. The anisotropic displacement factor exponent takes the form: -2 2
[h2 a*2 U11 + ... + 2 h k a* b* U12].
Atom

U11

U22

U33

U23

U13

U12

O(1)

76(2)

63(2)

32(1)

3(1)

20(1)

-9(1)

O(2)

56(1)

67(2)

29(1)

5(1)

-2(1)

-10(1)

O(3)

209(5)

63(2)

168(4)

-14(3)

138(4)

-18(3)

O(4)

106(3)

68(2)

63(2)

-18(2)

0(2)

4(2)

N(1)

81(2)

50(2)

28(2)

13(1)

-1(1)

-1(2)

222

N(2)

80(2)

51(2)

33(2)

6(1)

9(1)

5(2)

N(3)

61(2)

45(2)

39(2)

13(1)

10(1)

1(2)

N(4)

61(2)

52(2)

29(2)

5(1)

4(1)

0(2)

N(5)

85(2)

70(3)

50(2)

-4(2)

15(2)

-5(2)

C(1)

69(2)

40(2)

36(2)

7(2)

4(2)

2(2)

C(2)

49(2)

40(2)

31(2)

6(2)

0(1)

-1(2)

C(3)

45(2)

34(2)

30(2)

5(1)

2(1)

7(2)

C(4)

39(2)

31(2)

28(2)

2(1)

0(1)

2(1)

C(5)

36(2)

29(2)

29(2)

4(1)

3(1)

1(1)

C(6)

57(2)

36(2)

36(2)

4(2)

10(2)

13(2)

C(7)

55(2)

37(2)

35(2)

-3(2)

10(2)

-2(2)

C(8)

39(2)

37(2)

28(2)

-1(1)

4(1)

-6(2)

C(9)

53(2)

54(2)

27(2)

3(2)

8(1)

-11(2)

C(10)

84(3)

65(3)

34(2)

18(2)

6(2)

6(2)

C(11)

82(3)

42(2)

43(2)

13(2)

10(2)

10(2)

C(12)

43(2)

34(2)

29(2)

6(1)

3(1)

0(2)

C(13)

40(2)

30(2)

33(2)

4(1)

5(1)

2(2)

C(14)

65(2)

36(2)

37(2)

7(2)

7(2)

18(2)

C(15)

66(2)

35(2)

39(2)

-1(2)

11(2)

14(2)

C(16)

48(2)

34(2)

31(2)

2(1)

4(1)

5(2)

C(17)

82(3)

42(2)

34(2)

3(2)

11(2)

13(2)

C(18)

56(2)

47(2)

31(2)

8(2)

2(2)

3(2)

C(19)

46(2)

47(2)

44(2)

6(2)

-7(2)

-2(2)

C(20)

47(2)

64(3)

46(2)

-3(2)

9(2)

-13(2)

C(21)

65(3)

96(3)

39(2)

-6(2)

-3(2)

-20(2)

C(22)

55(2)

41(2)

37(2)

10(2)

6(2)

2(2)

C(23)

36(2)

40(2)

34(2)

4(2)

7(1)

0(2)

C(24)

46(2)

33(2)

33(2)

5(1)

7(1)

-4(2)

C(25)

36(2)

33(2)

29(2)

5(1)

6(1)

-2(2)

C(26)

36(2)

35(2)

27(2)

2(1)

3(1)

-1(2)

C(27)

63(2)

39(2)

33(2)

6(2)

-2(2)

-17(2)

C(28)

63(2)

41(2)

34(2)

-1(2)

-1(2)

-4(2)

C(29)

33(2)

39(2)

31(2)

4(2)

4(1)

1(2)

223

C(30)

43(2)

56(2)

31(2)

2(2)

1(1)

-2(2)

C(31)

76(3)

68(3)

32(2)

14(2)

-1(2)

-20(2)

C(32)

86(3)

50(2)

40(2)

11(2)

0(2)

-23(2)

C(33)

40(2)

38(2)

32(2)

3(2)

5(1)

-4(2)

C(34)

40(2)

32(2)

31(2)

4(1)

5(1)

-3(2)

C(35)

66(2)

41(2)

31(2)

5(2)

4(2)

-17(2)

C(36)

67(2)

37(2)

35(2)

2(2)

1(2)

-16(2)

C(37)

46(2)

41(2)

28(2)

2(1)

3(1)

-6(2)

C(38)

63(2)

46(2)

29(2)

1(2)

0(1)

-11(2)

C(39)

44(2)

44(2)

31(2)

9(2)

7(1)

0(2)

C(40)

43(2)

53(2)

38(2)

7(2)

8(1)

0(2)

C(41)

40(2)

71(3)

42(2)

0(2)

3(1)

7(2)

C(42)

56(2)

120(4)

37(2)

-5(2)

13(2)

13(3)

C(43)

77(3)

126(4)

73(3)

-23(3)

19(2)

-11(3)

C(44)

72(3)

86(4)

125(5)

-2(3)

-12(3)

-11(3)

C(45)

170(6)

59(3)

129(5)

-17(3)

102(5)

-32(4)

Table 8.60 Hydrogen coordinates ( x 104) and isotropic displacement parameters (2


x 103) for stanozolol DMF hydrate solvate.
Atom

U(eq)

H(1O1)

1684

2943

1979

73

H(1O2)

1581

766

2657

66

H(1O4)

4620(50)

1890(80)

7596(18)

96(19)

H(2O4)

5990(70)

930(100)

7650(20)

150(30)

H(1N1)

3138

5606

-2325

69

H(4)

3992

-662

7192

61

H(1)

2502

6834

-1573

62

H(3A)

1863

4914

-680

48

H(3B)

3352

4731

-562

48

H(5)

3569

2665

78

41

H(6A)

956

3227

234

56

H(6B)

1953

4760

155

56

H(7A)

3093

4060

912

54

224

H(7B)

1649

4398

1014

54

H(10A)

2343

-1192

1809

79

H(10B)

3829

-793

1828

79

H(11A)

3839

-1930

1066

72

H(11B)

2322

-2032

1017

72

H(12)

3873

964

832

46

H(13)

1793

-157

184

44

H(14A)

4475

-503

89

60

H(14B)

3505

-2104

113

60

H(15A)

2590

-1440

-670

60

H(15B)

4081

-1595

-706

60

H(16)

4285

1515

-680

49

H(17A)

4098

387

-1464

68

H(17B)

2595

235

-1463

68

H(19A)

436

2372

-562

60

H(19B)

938

412

-637

60

H(19C)

901

1787

-1077

60

H(20A)

443

951

708

68

H(20B)

230

1998

1199

68

H(20C)

682

-11

1222

68

H(21A)

3756

3798

1705

88

H(21B)

4590

2205

1525

88

H(21C)

4256

2308

2081

88

H(22)

2611

-4715

6470

57

H(24A)

1923

-2734

5560

48

H(24B)

3400

-2621

5488

48

H(26)

3542

-482

4851

42

H(27A)

887

-914

4630

59

H(27B)

1873

-2493

4715

59

H(28A)

2852

-1738

3989

60

H(28B)

1376

-2024

3856

60

H(31A)

3462

3213

3130

76

H(31B)

1987

3664

3133

76

225

H(32A)

3708

4200

3908

76

H(32B)

2205

4384

3934

76

H(33)

3716

1280

4115

47

H(34)

1791

2416

4730

44

H(35A)

4501

2680

4883

60

H(35B)

3540

4302

4858

60

H(36A)

4309

3650

5684

60

H(36B)

2804

3558

5616

60

H(37)

4440

559

5629

50

H(38A)

4506

1539

6425

60

H(38B)

3016

1886

6403

60

H(40A)

545

-117

5416

58

H(40B)

1109

1809

5521

58

H(40C)

1118

388

5950

58

H(41A)

279

1336

4168

66

H(41B)

-36

567

3633

66

H(41C)

478

2536

3703

66

H(42A)

3344

-1398

3201

91

H(42B)

4243

130

3425

91

H(42C)

3794

147

2859

91

H(43A)

9187

6354

3200

118

H(43B)

8340

7192

2756

118

H(43C)

9650

8092

2937

118

H(44A)

9587

3799

2089

124

H(44B)

8380

4285

2377

124

H(44C)

9550

3287

2651

124

H(45)

11282

7509

2497

150

226

13) Ethinylestradiol.

Table 8.61 Crystal data and structure refinement for ethinylestradiol.


Identification code

EE_1

Empirical formula

C20 H24 O2

Formula weight

296.39

Temperature

150.1 K

Wavelength

0.7107

Crystal system

Orthorhombic

Space group

P212121

Unit cell dimensions

a = 6.8664(3)
b = 20.9003(11)
c = 22.0448(8)

Volume

3163.6(2) 3

Density (calculated)

1.245 Mg/m3

Absorption coefficient

0.078 mm-1

F(000)

1280

Crystal size

0.50 x 0.40 x 0.20 mm

Theta range for data collection

2.9325 to 29.1217

Index ranges

-9<=h<=5; -26<=k<=10; -29<=l<=14

Reflections collected

9428

Independent reflections

5434 [Rint = 0.0424]

Reflections observed (>2)

3926

Data Completeness

0.998

Absorption correction

Semi-empirical from equivalents

Max. and min. transmission

1.00000 and 0.88116


227

Refinement method

Full-matrix least-squares on F2

Data / restraints / parameters

5434 / 4 / 415

Goodness-of-fit on F2

1.027

Final R indices [I>2(I)]

R1 = 0.0626 wR2 = 0.1001

R indices (all data)

R1 = 0.0991 wR2 = 0.1145

Absolute structure parameter

0.7(17)

Largest diff. peak and hole

0.198 and -0.209 e.-3

Table 8.62 Atomic coordinates ( x 104) and equivalent isotropic displacement


parameters (2 x 103) for ethinylestradiol. U(eq) is defined as one third of the trace
of the orthogonalized Uij tensor.
Atom

U(eq)

O(1)

9500(4)

3751(2)

5850(1)

33(1)

O(2)

8083(4)

1034(1)

1572(1)

26(1)

O(3)

2555(4)

-213(1)

-4252(1)

29(1)

O(4)

6256(3)

565(1)

544(1)

23(1)

C(1)

9419(6)

3506(2)

5268(2)

25(1)

C(2)

7871(5)

3621(2)

4885(1)

23(1)

C(3)

7802(5)

3355(2)

4304(1)

20(1)

C(4)

6030(5)

3492(2)

3918(1)

25(1)

C(5)

6336(5)

3334(2)

3253(1)

22(1)

C(6)

7260(5)

2676(2)

3192(1)

18(1)

C(7)

7457(5)

2453(2)

2535(1)

17(1)

C(8)

5664(5)

2466(2)

2123(2)

28(1)

C(9)

6205(5)

2007(2)

1599(1)

26(1)

C(10)

8160(5)

1686(2)

1777(1)

21(1)

C(11)

8240(5)

1769(2)

2483(1)

19(1)

C(12)

10247(5)

1739(2)

2782(1)

25(1)

C(13)

10206(5)

1996(2)

3434(1)

27(1)

C(14)

9308(5)

2671(2)

3474(1)

20(1)

C(15)

9315(5)

2963(2)

4110(1)

19(1)

C(16)

10877(5)

2861(2)

4503(2)

26(1)

C(17)

10941(6)

3128(2)

5076(2)

28(1)

228

C(18)

6871(6)

1268(2)

2763(2)

30(1)

C(19)

9829(5)

2009(2)

1481(1)

24(1)

C(20)

11164(6)

2255(2)

1245(2)

36(1)

C(21)

2953(5)

-75(2)

-3660(1)

20(1)

C(22)

4672(5)

235(2)

-3530(1)

19(1)

C(23)

5183(5)

398(2)

-2934(1)

18(1)

C(24)

7113(5)

717(2)

-2829(1)

23(1)

C(25)

7319(5)

1029(2)

-2207(1)

21(1)

C(26)

6517(5)

596(2)

-1709(1)

17(1)

C(27)

6763(5)

890(2)

-1079(1)

16(1)

C(28)

8804(5)

1087(2)

-853(1)

23(1)

C(29)

8596(5)

1111(2)

-149(1)

24(1)

C(30)

6460(5)

909(2)

-14(1)

20(1)

C(31)

5959(5)

471(2)

-565(1)

16(1)

C(32)

3798(5)

341(2)

-677(1)

20(1)

C(33)

3480(5)

51(2)

-1312(1)

20(1)

C(34)

4346(5)

479(2)

-1815(1)

17(1)

C(35)

3912(5)

247(2)

-2458(1)

16(1)

C(36)

2199(5)

-70(2)

-2599(1)

20(1)

C(37)

1697(5)

-239(2)

-3189(1)

21(1)

C(38)

7061(5)

-166(2)

-493(2)

26(1)

C(39)

5174(6)

1480(2)

-5(2)

24(1)

C(40)

4131(6)

1927(2)

-17(2)

36(1)

Table 8.63 Bond lengths [] and angles [] for ethinylestradiol.


Bond lengths []
O(1)-C(1)

1.382(4)

O(2)-C(10)

1.438(4)

O(3)-C(21)

1.364(4)

O(4)-C(30)

1.432(4)

C(1)-C(17)

1.377(5)

C(1)-C(2)

1.379(5)

C(2)-C(3)

1.397(4)

C(3)-C(15)

1.391(5)

C(3)-C(4)

1.512(5)

C(4)-C(5)

1.519(4)

C(5)-C(6)

1.520(4)

C(6)-C(7)

1.527(4)

C(6)-C(14)

1.538(5)

C(7)-C(8)

1.530(4)

229

C(7)-C(11)

1.532(5)

C(8)-C(9)

1.546(5)

C(9)-C(10)

1.551(5)

C(10)-C(19)

1.481(5)

C(10)-C(11)

1.567(4)

C(11)-C(12)

1.529(5)

C(11)-C(18)

1.537(5)

C(12)-C(13)

1.536(4)

C(13)-C(14)

1.542(5)

C(14)-C(15)

1.529(4)

C(15)-C(16)

1.395(5)

C(16)-C(17)

1.382(4)

C(19)-C(20)

1.173(5)

C(21)-C(22)

1.377(5)

C(21)-C(37)

1.393(4)

C(22)-C(23)

1.401(4)

C(23)-C(35)

1.400(4)

C(23)-C(24)

1.501(4)

C(24)-C(25)

1.524(4)

C(25)-C(26)

1.525(4)

C(26)-C(34)

1.528(4)

C(26)-C(27)

1.529(4)

C(27)-C(31)

1.533(4)

C(27)-C(28)

1.543(4)

C(28)-C(29)

1.560(4)

C(29)-C(30)

1.555(5)

C(30)-C(39)

1.485(5)

C(30)-C(31)

1.560(4)

C(31)-C(32)

1.529(4)

C(31)-C(38)

1.539(5)

C(32)-C(33)

1.541(4)

C(33)-C(34)

1.542(4)

C(34)-C(35)

1.528(4)

C(35)-C(36)

1.385(5)

C(36)-C(37)

1.390(4)

C(39)-C(40)

1.178(5)

Bond angles []
C(17)-C(1)-C(2)

119.8(3)

C(17)-C(1)-O(1)

117.9(3)

C(2)-C(1)-O(1)

122.3(4)

C(1)-C(2)-C(3)

121.1(3)

C(15)-C(3)-C(2)

119.5(3)

C(15)-C(3)-C(4)

122.6(3)

C(2)-C(3)-C(4)

117.9(3)

C(3)-C(4)-C(5)

113.0(3)

C(4)-C(5)-C(6)

109.9(3)

C(5)-C(6)-C(7)

113.3(3)

C(5)-C(6)-C(14)

110.6(3)

C(7)-C(6)-C(14)

107.5(3)

C(6)-C(7)-C(8)

119.1(3)

C(6)-C(7)-C(11)

112.8(3)

C(8)-C(7)-C(11)

104.7(3)

C(7)-C(8)-C(9)

103.9(3)

C(8)-C(9)-C(10)

106.7(3)

O(2)-C(10)-C(19)

108.8(3)

O(2)-C(10)-C(9)

107.4(3)

C(19)-C(10)-C(9)

111.2(3)

O(2)-C(10)-C(11)

114.7(3)

C(19)-C(10)-C(11)

111.1(3)

C(9)-C(10)-C(11)

103.5(3)

C(12)-C(11)-C(7)

108.8(3)

C(12)-C(11)-C(18)

110.5(3)

C(7)-C(11)-C(18)

113.0(3)

230

C(12)-C(11)-C(10)

117.1(3)

C(7)-C(11)-C(10)

99.5(3)

C(18)-C(11)-C(10)

107.7(3)

C(11)-C(12)-C(13)

111.9(3)

C(12)-C(13)-C(14)

112.4(3)

C(15)-C(14)-C(6)

111.8(3)

C(15)-C(14)-C(13)

114.6(3)

C(6)-C(14)-C(13)

110.4(3)

C(3)-C(15)-C(16)

118.3(3)

C(3)-C(15)-C(14)

121.0(3)

C(16)-C(15)-C(14)

120.7(3)

C(17)-C(16)-C(15)

122.0(4)

C(1)-C(17)-C(16)

119.3(3)

C(20)-C(19)-C(10)

178.9(4)

O(3)-C(21)-C(22)

118.1(3)

O(3)-C(21)-C(37)

122.6(3)

C(22)-C(21)-C(37)

119.3(3)

C(21)-C(22)-C(23)

121.7(3)

C(35)-C(23)-C(22)

119.4(3)

C(35)-C(23)-C(24)

122.3(3)

C(22)-C(23)-C(24)

118.3(3)

C(23)-C(24)-C(25)

114.2(3)

C(24)-C(25)-C(26)

111.1(3)

C(25)-C(26)-C(34)

109.7(3)

C(25)-C(26)-C(27)

112.1(3)

C(34)-C(26)-C(27)

108.1(3)

C(26)-C(27)-C(31)

113.7(3)

C(26)-C(27)-C(28)

120.1(3)

C(31)-C(27)-C(28)

104.0(2)

C(27)-C(28)-C(29)

104.3(3)

C(30)-C(29)-C(28)

105.5(3)

O(4)-C(30)-C(39)

109.5(3)

O(4)-C(30)-C(29)

113.1(3)

C(39)-C(30)-C(29)

110.2(3)

O(4)-C(30)-C(31)

110.7(3)

C(39)-C(30)-C(31)

110.6(3)

C(29)-C(30)-C(31)

102.6(3)

C(32)-C(31)-C(27)

109.4(3)

C(32)-C(31)-C(38)

109.9(3)

C(27)-C(31)-C(38)

113.2(3)

C(32)-C(31)-C(30)

116.3(3)

C(27)-C(31)-C(30)

99.3(3)

C(38)-C(31)-C(30)

108.5(3)

C(31)-C(32)-C(33)

110.7(3)

C(32)-C(33)-C(34)

111.7(3)

C(35)-C(34)-C(26)

112.5(3)

C(35)-C(34)-C(33)

114.1(3)

C(26)-C(34)-C(33)

111.1(3)

C(36)-C(35)-C(23)

118.0(3)

C(36)-C(35)-C(34)

121.7(3)

C(23)-C(35)-C(34)

120.2(3)

C(35)-C(36)-C(37)

122.8(3)

C(36)-C(37)-C(21)

118.8(3)

C(40)-C(39)-C(30)

177.7(4)

231

Table 8.64 Anisotropic displacement parameters (2 x 103) for ethinylestradiol. The


anisotropic displacement factor exponent takes the form: -2 2 [h2 a*2 U11 + ... + 2 h
k a* b* U12].
Atom

U11

U22

U33

U23

U13

U12

O(1)

44(2)

34(2)

21(1)

-10(1)

-2(1)

-5(2)

O(2)

33(2)

21(2)

26(1)

-7(1)

-4(1)

6(1)

O(3)

32(2)

38(2)

16(1)

-5(1)

-4(1)

-6(2)

O(4)

32(2)

26(2)

12(1)

2(1)

-2(1)

-4(1)

C(1)

30(2)

23(2)

22(2)

0(2)

0(2)

-9(2)

C(2)

25(2)

18(2)

26(2)

-4(2)

3(2)

0(2)

C(3)

25(2)

16(2)

18(2)

2(2)

0(2)

-1(2)

C(4)

23(2)

24(2)

27(2)

-4(2)

-3(2)

5(2)

C(5)

22(2)

20(2)

24(2)

-2(2)

-4(2)

6(2)

C(6)

19(2)

15(2)

18(2)

2(2)

0(2)

0(2)

C(7)

17(2)

16(2)

17(2)

0(2)

-2(2)

1(2)

C(8)

25(2)

34(3)

25(2)

-6(2)

-12(2)

11(2)

C(9)

28(2)

28(2)

23(2)

-2(2)

-10(2)

5(2)

C(10)

26(2)

19(2)

19(2)

-4(2)

-1(2)

1(2)

C(11)

20(2)

19(2)

17(2)

3(2)

3(2)

3(2)

C(12)

29(2)

23(2)

22(2)

-3(2)

-2(2)

8(2)

C(13)

33(2)

25(2)

21(2)

-3(2)

-9(2)

11(2)

C(14)

19(2)

20(2)

20(2)

1(2)

1(2)

0(2)

C(15)

21(2)

18(2)

19(2)

2(2)

-3(2)

-3(2)

C(16)

24(2)

24(2)

30(2)

-1(2)

-2(2)

3(2)

C(17)

30(2)

28(2)

25(2)

0(2)

-12(2)

-6(2)

C(18)

44(3)

23(2)

25(2)

-2(2)

4(2)

-3(2)

C(19)

24(2)

30(2)

17(2)

1(2)

1(2)

5(2)

C(20)

32(2)

47(3)

27(2)

4(2)

8(2)

2(2)

C(21)

23(2)

21(2)

16(2)

-2(2)

-2(2)

6(2)

C(22)

19(2)

20(2)

18(2)

1(2)

2(2)

2(2)

C(23)

20(2)

15(2)

20(2)

-2(2)

-2(2)

3(2)

C(24)

24(2)

28(2)

17(2)

-2(2)

2(2)

-3(2)

C(25)

17(2)

27(2)

19(2)

-1(2)

-1(2)

-7(2)

232

C(26)

17(2)

18(2)

16(2)

-2(2)

2(1)

2(2)

C(27)

19(2)

13(2)

16(2)

0(2)

0(2)

-3(2)

C(28)

18(2)

28(2)

22(2)

1(2)

0(2)

-7(2)

C(29)

23(2)

29(2)

19(2)

-2(2)

-4(2)

-7(2)

C(30)

20(2)

23(2)

15(2)

2(2)

0(2)

-3(2)

C(31)

17(2)

17(2)

14(2)

0(2)

1(2)

0(2)

C(32)

23(2)

23(2)

14(2)

-1(2)

2(2)

-4(2)

C(33)

19(2)

20(2)

20(2)

-1(2)

3(2)

-4(2)

C(34)

16(2)

17(2)

18(2)

-2(2)

2(1)

-1(2)

C(35)

17(2)

12(2)

19(2)

3(2)

1(2)

2(2)

C(36)

21(2)

20(2)

19(2)

3(2)

2(2)

-2(2)

C(37)

18(2)

24(2)

21(2)

-1(2)

-3(2)

-4(2)

C(38)

30(2)

24(2)

23(2)

-2(2)

-2(2)

-1(2)

C(39)

33(2)

26(2)

11(2)

-4(2)

1(2)

-3(2)

C(40)

50(3)

29(3)

29(2)

-4(2)

4(2)

13(2)

Table 8.65 Hydrogen coordinates ( x 104) and isotropic displacement (2 x 103) for
ethinylestradiol.
Atom

U(eq)

H(2)

6854

3881

5016

30

H(4A)

5698

3941

3955

32

H(4B)

4940

3245

4071

32

H(5A)

7175

3653

3068

28

H(5B)

5096

3340

3042

28

H(6)

6449

2367

3411

23

H(7)

8429

2732

2345

22

H(8A)

5420

2894

1972

36

H(8B)

4518

2316

2337

36

H(9A)

6346

2242

1223

34

H(9B)

5199

1686

1546

34

H(12A)

11163

1988

2544

32

H(12B)

10697

1299

2785

32

H(13A)

11524

2009

3592

35

H(13B)

9457

1706

3686

35
233

H(14)

10118

2949

3221

25

H(16)

11906

2605

4375

34

H(17)

12001

3054

5328

36

H(18A)

7398

848

2700

39

H(18B)

5613

1297

2574

39

H(18C)

6744

1347

3190

39

H(20)

12223

2450

1058

46

H(22)

5516

338

-3845

25

H(24A)

7302

1041

-3138

30

H(24B)

8136

401

-2877

30

H(25A)

6622

1432

-2204

27

H(25B)

8683

1117

-2128

27

H(26)

7204

185

-1722

22

H(27)

5977

1281

-1078

21

H(28A)

9169

1502

-1013

30

H(28B)

9776

775

-974

30

H(29A)

9505

818

42

31

H(29B)

8846

1539

31

H(32A)

3073

738

-643

26

H(32B)

3312

48

-372

26

H(33A)

2095

-3

-1383

26

H(33B)

4084

-368

-1329

26

H(34)

3709

896

-1775

22

H(36)

1348

-174

-2286

26

H(37)

544

-457

-3267

27

H(38A)

6523

-401

-158

33

H(38B)

8413

-81

-417

33

H(38C)

6932

-413

-858

33

H(40)

3306

2279

-27

47

H(1O1)

8430(40)

3979(19)

5932(18)

73(18)

H(2O2)

9290(30)

860(20)

1590(20)

85(18)

H(3O3)

1330(30)

-364(19)

-4288(16)

56(15)

H(4O4)

6740(50)

791(15)

851(11)

41(12)

234

14) Ethinylestradiol acetone solvate.

Table 8.66 Crystal data and structure refinement for ethinylestradiol acetone solvate.
Identification code

EE_2

Empirical formula

C23 H30 O3

Formula weight

354.47

Temperature

149.9 K

Wavelength

0.7107

Crystal system

Monoclinic

Space group

P21

Unit cell dimensions

a = 6.8006(4)
b = 22.1731(9), = 117.031(7)
c = 7.3916(5)

Volume

992.83(9) 3

Density (calculated)

1.186 Mg/m3

Absorption coefficient

0.077 mm-1

F(000)

384

Crystal size

0.50 x 0.40 x 0.20 mm

Theta range for data collection

3.0877 to 28.9937

Index ranges

-8<=h<=8; -30<=k<=14; -9<=l<=8

Reflections collected

3018

Independent reflections

2106 [Rint = 0.0216]

235

Reflections observed (>2)

1978

Data Completeness

0.889

Absorption correction

Semi-empirical from equivalents

Max. and min. transmission

1.00000 and 0.89846

Refinement method

Full-matrix least-squares on F2

Data / restraints / parameters

2106 / 1 / 238

Goodness-of-fit on F2

1.043

Final R indices [I>2(I)]

R1 = 0.0315 wR2 = 0.0735

R indices (all data)

R1 = 0.0348 wR2 = 0.0756

Absolute structure parameter

0.0(12)

Largest diff. peak and hole

0.108 and -0.172 e.-3

Table 8.67 Atomic coordinates ( x 104) and equivalent isotropic displacement


parameters (2 x 103) for ethinylestradiol acetone solvate. U(eq) is defined as one
third of the trace of the orthogonalized Uij tensor.
Atom

U(eq)

O(1)

3292(3)

4167(1)

10678(2)

33(1)

O(2)

4115(2)

8735(1)

5559(2)

27(1)

O(3)

3545(3)

9779(1)

3558(2)

37(1)

C(16)

3583(3)

5826(1)

10801(3)

22(1)

C(17)

3892(3)

5238(1)

11534(3)

24(1)

C(1)

3110(3)

4764(1)

10153(3)

24(1)

C(2)

2011(3)

4893(1)

8100(3)

24(1)

C(3)

1709(3)

5479(1)

7366(3)

22(1)

C(4)

478(4)

5566(1)

5096(3)

29(1)

C(5)

-165(4)

6216(1)

4476(3)

28(1)

C(6)

1750(3)

6631(1)

5718(3)

21(1)

C(14)

2217(3)

6612(1)

7969(3)

21(1)

C(15)

2525(3)

5962(1)

8735(3)

20(1)

C(13)

4100(4)

7036(1)

9286(3)

24(1)

C(12)

3728(4)

7689(1)

8448(3)

25(1)

C(11)

3308(3)

7699(1)

6234(3)

21(1)

C(10)

2396(3)

8296(1)

5043(3)

23(1)

236

C(9)

1430(4)

8090(1)

2796(3)

28(1)

C(8)

796(4)

7419(1)

2766(3)

30(1)

C(7)

1361(3)

7279(1)

4992(3)

22(1)

C(18)

5443(3)

7528(1)

6112(3)

29(1)

C(19)

601(4)

8543(1)

5429(3)

26(1)

C(20)

-900(4)

8716(1)

5667(4)

37(1)

C(21)

2434(4)

10568(1)

1167(4)

35(1)

C(22)

2784(3)

9923(1)

1773(3)

29(1)

C(23)

2147(4)

9463(1)

134(4)

38(1)

Table 8.68 Bond lengths [] and angles [] for ethinylestradiol acetone solvate.
Bond lengths []
O(1)-C(1)

1.369(3)

O(2)-C(10)

1.434(3)

O(3)-C(22)

1.221(2)

C(16)-C(17)

1.392(3)

C(16)-C(15)

1.394(3)

C(17)-C(1)

1.390(3)

C(1)-C(2)

1.383(3)

C(2)-C(3)

1.385(3)

C(3)-C(15)

1.404(3)

C(3)-C(4)

1.509(3)

C(4)-C(5)

1.515(3)

C(5)-C(6)

1.517(3)

C(6)-C(7)

1.513(3)

C(6)-C(14)

1.546(3)

C(14)-C(15)

1.526(3)

C(14)-C(13)

1.529(3)

C(13)-C(12)

1.550(3)

C(12)-C(11)

1.528(3)

C(11)-C(7)

1.536(3)

C(11)-C(18)

1.542(3)

C(11)-C(10)

1.554(3)

C(10)-C(19)

1.479(3)

C(10)-C(9)

1.552(3)

C(9)-C(8)

1.545(3)

C(8)-C(7)

1.541(3)

C(19)-C(20)

1.176(3)

C(21)-C(22)

1.486(3)

C(22)-C(23)

1.489(3)

Bond angles []
C(17)-C(16)-C(15)

122.8(2)

C(1)-C(17)-C(16)

118.83(19)

O(1)-C(1)-C(2)

116.5(2)

O(1)-C(1)-C(17)

124.50(19)

C(2)-C(1)-C(17)

119.0(2)

C(1)-C(2)-C(3)

122.2(2)

C(2)-C(3)-C(15)

119.61(19)

C(2)-C(3)-C(4)

117.7(2)

C(15)-C(3)-C(4)

122.7(2)

C(3)-C(4)-C(5)

113.35(18)
237

C(4)-C(5)-C(6)

110.14(18)

C(7)-C(6)-C(5)

113.46(17)

C(7)-C(6)-C(14)

109.04(18)

C(5)-C(6)-C(14)

109.53(17)

C(15)-C(14)-C(13)

114.21(17)

C(15)-C(14)-C(6)

110.65(18)

C(13)-C(14)-C(6)

111.78(17)

C(16)-C(15)-C(3)

117.5(2)

C(16)-C(15)-C(14)

121.76(19)

C(3)-C(15)-C(14)

120.72(17)

C(14)-C(13)-C(12)

112.51(18)

C(11)-C(12)-C(13)

111.04(18)

C(12)-C(11)-C(7)

108.78(17)

C(12)-C(11)-C(18)

109.66(17)

C(7)-C(11)-C(18)

113.21(17)

C(12)-C(11)-C(10)

116.86(18)

C(7)-C(11)-C(10)

99.45(16)

C(18)-C(11)-C(10)

108.67(17)

O(2)-C(10)-C(19)

109.97(18)

O(2)-C(10)-C(9)

112.48(16)

C(19)-C(10)-C(9)

109.33(18)

O(2)-C(10)-C(11)

111.13(16)

C(19)-C(10)-C(11)

110.96(17)

C(9)-C(10)-C(11)

102.79(17)

C(8)-C(9)-C(10)

106.14(18)

C(7)-C(8)-C(9)

104.31(18)

C(6)-C(7)-C(11)

113.54(17)

C(6)-C(7)-C(8)

119.29(18)

C(11)-C(7)-C(8)

104.15(17)

C(20)-C(19)-C(10)

176.4(2)

O(3)-C(22)-C(21)

120.6(2)

O(3)-C(22)-C(23)

121.5(2)

C(21)-C(22)-C(23)

117.8(2)

Table 8.69 Anisotropic displacement parameters (2 x 103) for ethinylestradiol


acetone solvate. The anisotropic displacement factor exponent takes the form: -2 2
[h2 a*2 U11 + ... + 2 h k a* b* U12].
Atom

U11

U22

U33

U23

U13

U12

O(1)

36(1)

23(1)

33(1)

6(1)

10(1)

1(1)

O(2)

25(1)

21(1)

31(1)

5(1)

10(1)

-2(1)

O(3)

44(1)

34(1)

27(1)

6(1)

11(1)

-3(1)

C(16)

20(1)

24(1)

24(1)

-1(1)

10(1)

-3(1)

C(17)

23(1)

28(1)

20(1)

2(1)

9(1)

0(1)

C(1)

22(1)

22(1)

30(1)

5(1)

13(1)

4(1)

C(2)

21(1)

23(1)

30(1)

-6(1)

12(1)

-4(1)

C(3)

20(1)

25(1)

23(1)

0(1)

10(1)

1(1)

C(4)

35(1)

24(1)

23(1)

-4(1)

8(1)

-7(1)

C(5)

31(1)

28(1)

17(1)

0(1)

5(1)

-7(1)

C(6)

23(1)

20(1)

21(1)

-1(1)

9(1)

-1(1)

238

C(14)

19(1)

22(1)

20(1)

-1(1)

8(1)

1(1)

C(15)

17(1)

22(1)

23(1)

-1(1)

11(1)

-1(1)

C(13)

27(1)

22(1)

20(1)

-1(1)

7(1)

-3(1)

C(12)

30(1)

20(1)

22(1)

0(1)

8(1)

-2(1)

C(11)

19(1)

19(1)

25(1)

0(1)

9(1)

-2(1)

C(10)

22(1)

21(1)

25(1)

2(1)

11(1)

-1(1)

C(9)

31(1)

28(1)

24(1)

3(1)

11(1)

-2(1)

C(8)

35(1)

30(1)

22(1)

-1(1)

10(1)

-5(1)

C(7)

22(1)

23(1)

19(1)

1(1)

7(1)

1(1)

C(18)

24(1)

28(1)

37(1)

5(1)

15(1)

3(1)

C(19)

27(1)

19(1)

28(1)

4(1)

10(1)

-1(1)

C(20)

37(1)

32(1)

49(2)

5(1)

27(1)

7(1)

C(21)

29(1)

37(2)

41(1)

13(1)

18(1)

3(1)

C(22)

21(1)

34(1)

31(1)

4(1)

12(1)

-4(1)

C(23)

38(1)

45(2)

35(1)

-2(1)

19(1)

-8(1)

Table 8.70 Hydrogen coordinates ( x 104) and isotropic displacement parameters (2


x 103) for ethinylestradiol acetone solvate.
Atom

U(eq)

H(1O1)

3917

4136

11919

43

H(2O2)

3613

9038

4864

35

H(16)

4105

6142

11729

29

H(17)

4610

5162

12923

31

H(2)

1456

4577

7180

32

H(4A)

-847

5320

4561

38

H(4B)

1395

5425

4490

38

H(5A)

-1430

6321

4687

36

H(5B)

-577

6264

3044

36

H(6)

3062

6483

5631

28

H(14)

887

6764

8014

27

H(13A)

5472

6883

9362

32

H(13B)

4240

7040

10652

32

H(12A)

2473

7864

8548

33

239

H(12B)

5017

7931

9263

33

H(9A)

142

8328

1947

36

H(9B)

2520

8135

2299

36

H(8A)

-764

7358

1882

39

H(8B)

1641

7166

2306

39

H(7)

112

7424

5191

29

H(18A)

5892

7129

6648

38

H(18B)

6588

7810

6890

38

H(18C)

5177

7538

4721

38

H(20)

-2087

8852

5855

48

H(21A)

2914

10816

2358

45

H(21B)

894

10638

299

45

H(21C)

3269

10668

453

45

H(23A)

764

9284

-108

50

H(23B)

3263

9157

541

50

H(23C)

2002

9653

-1088

50

240

15) Ethinylestradiol pentan-2-ol solvate.

Table 8.71 Crystal data and structure refinement for ethinylestradiol pentan-2-ol
solvate.
Identification code

EE_3

Empirical formula

C25 H36 O3

Formula weight

384.54

Temperature

149.9 K

Wavelength

0.7107

Crystal system

Monoclinic

Space group

P21

Unit cell dimensions

a = 12.3596(6)
b = 6.9442(3), = 111.000(6)
c = 13.9837(8)

Volume

1120.47(9) 3

Density (calculated)

1.140 Mg/m3

Absorption coefficient

0.073 mm-1

F(000)

420

Crystal size

0.50 x 0.40 x 0.20 mm

Theta range for data collection

2.9274 to 29.0582

Index ranges

-16<=h<=8; -8<=k<=7; -18<=l<=18

Reflections collected

5341

Independent reflections

3508 [Rint = 0.0324]


241

Reflections observed (>2)

2899

Data Completeness

0.998

Absorption correction

Semi-empirical from equivalents

Max. and min. transmission

1.00000 and 0.89590

Refinement method

Full-matrix least-squares on F2

Data / restraints / parameters

3508 / 1 / 257

Goodness-of-fit on F2

1.048

Final R indices [I>2(I)]

R1 = 0.0578 wR2 = 0.1400

R indices (all data)

R1 = 0.0729 wR2 = 0.1516

Absolute structure parameter

-0.2(19)

Largest diff. peak and hole

0.611 and -0.284 e.-3

Table 8.72 Atomic coordinates ( x 104) and equivalent isotropic displacement


parameters (2 x 103) for ethinylestradiol pentan-2-ol solvate.U(eq) is defined as
one third of the trace of the orthogonalized Uij tensor.
Atom

U(eq)

O(1)

267(2)

2131(3)

7534(2)

37(1)

O(2)

-8681(2)

5422(3)

7101(2)

35(1)

O(3)

1121(2)

-1358(4)

8203(2)

41(1)

C(24)

1511(4)

-1881(7)

9265(3)

54(1)

C(22)

2880(4)

936(8)

9793(3)

73(2)

C(21)

3069(6)

2762(9)

10362(5)

103(2)

C(23)

1879(5)

-176(8)

9906(4)

70(2)

C(16)

-2709(3)

1343(5)

7442(3)

31(1)

C(17)

-1547(3)

969(5)

7608(3)

32(1)

C(1)

-887(3)

2379(5)

7390(2)

28(1)

C(2)

-1384(3)

4125(5)

7017(3)

29(1)

C(3)

-2544(3)

4491(5)

6833(2)

27(1)

C(4)

-3032(3)

6425(5)

6386(3)

38(1)

C(5)

-4346(3)

6427(5)

5909(3)

33(1)

C(6)

-4859(3)

5531(4)

6643(2)

24(1)

C(14)

-4523(3)

3408(4)

6828(2)

23(1)

C(15)

-3231(3)

3086(5)

7063(2)

22(1)

242

C(13)

-5003(3)

2509(5)

7600(3)

30(1)

C(12)

-6329(3)

2772(5)

7257(3)

31(1)

C(11)

-6681(3)

4892(5)

7046(2)

26(1)

C(7)

-6178(3)

5666(5)

6265(2)

26(1)

C(8)

-6761(3)

7629(5)

5947(3)

36(1)

C(9)

-7982(3)

7350(6)

5999(3)

39(1)

C(10)

-7996(3)

5324(5)

6458(3)

28(1)

C(18)

-6297(3)

6048(5)

8051(3)

36(1)

C(19)

-8536(3)

3881(6)

5649(3)

41(1)

C(20)

-9001(3)

2744(8)

5028(4)

68(2)

C(25)

621(4)

-3170(7)

9450(4)

63(1)

Table 8.73 Bond lengths [] and angles [] for ethinylestradiol pentan-2-ol solvate.
Bond lengths []
O(1)-C(1)

1.379(4)

O(2)-C(10)

1.440(4)

O(3)-C(24)

1.434(4)

C(24)-C(23)

1.455(7)

C(24)-C(25)

1.510(6)

C(22)-C(21)

1.470(8)

C(22)-C(23)

1.514(7)

C(16)-C(15)

1.384(5)

C(16)-C(17)

1.395(4)

C(17)-C(1)

1.376(5)

C(1)-C(2)

1.375(5)

C(2)-C(3)

1.386(4)

C(3)-C(15)

1.403(4)

C(3)-C(4)

1.513(5)

C(4)-C(5)

1.518(4)

C(5)-C(6)

1.520(4)

C(6)-C(7)

1.525(4)

C(6)-C(14)

1.528(4)

C(14)-C(15)

1.527(4)

C(14)-C(13)

1.538(4)

C(13)-C(12)

1.546(4)

C(12)-C(11)

1.534(5)

C(11)-C(7)

1.534(4)

C(11)-C(18)

1.538(5)

C(11)-C(10)

1.566(4)

C(7)-C(8)

1.531(5)

C(8)-C(9)

1.549(5)

C(9)-C(10)

1.549(5)

C(10)-C(19)

1.479(5)

C(19)-C(20)

1.162(6)

Bond angles []
O(3)-C(24)-C(23)

110.3(4)

O(3)-C(24)-C(25)

109.4(4)

C(23)-C(24)-C(25)

117.6(4)

C(21)-C(22)-C(23)

111.1(5)
243

C(24)-C(23)-C(22)

116.0(4)

C(15)-C(16)-C(17)

122.5(3)

C(1)-C(17)-C(16)

119.1(3)

C(2)-C(1)-C(17)

119.5(3)

C(2)-C(1)-O(1)

117.6(3)

C(17)-C(1)-O(1)

122.9(3)

C(1)-C(2)-C(3)

121.6(3)

C(2)-C(3)-C(15)

120.0(3)

C(2)-C(3)-C(4)

118.2(3)

C(15)-C(3)-C(4)

121.8(3)

C(3)-C(4)-C(5)

112.8(3)

C(4)-C(5)-C(6)

110.0(3)

C(5)-C(6)-C(7)

113.2(3)

C(5)-C(6)-C(14)

110.8(3)

C(7)-C(6)-C(14)

108.1(2)

C(15)-C(14)-C(6)

112.2(2)

C(15)-C(14)-C(13)

115.2(2)

C(6)-C(14)-C(13)

111.1(3)

C(16)-C(15)-C(3)

117.3(3)

C(16)-C(15)-C(14)

121.2(3)

C(3)-C(15)-C(14)

121.4(3)

C(14)-C(13)-C(12)

111.6(3)

C(11)-C(12)-C(13)

111.6(3)

C(7)-C(11)-C(12)

108.4(3)

C(7)-C(11)-C(18)

113.4(3)

C(12)-C(11)-C(18)

110.5(3)

C(7)-C(11)-C(10)

99.7(2)

C(12)-C(11)-C(10)

117.0(3)

C(18)-C(11)-C(10)

107.6(2)

C(6)-C(7)-C(8)

119.2(3)

C(6)-C(7)-C(11)

112.8(3)

C(8)-C(7)-C(11)

104.5(3)

C(7)-C(8)-C(9)

103.9(3)

C(10)-C(9)-C(8)

106.8(3)

O(2)-C(10)-C(19)

107.7(3)

O(2)-C(10)-C(9)

108.2(3)

C(19)-C(10)-C(9)

111.6(3)

O(2)-C(10)-C(11)

114.4(3)

C(19)-C(10)-C(11)

111.7(3)

C(9)-C(10)-C(11)

103.2(3)

C(20)-C(19)-C(10)

176.9(4)

Table 8.74 Anisotropic displacement parameters (2 x 103) for ethinylestradiol


pentan-2-ol solvate. The anisotropic displacement factor exponent takes the form: -2
2 [h2 a*2 U11 + ... + 2 h k a* b* U12].
Atom

U11

U22

U33

U23

U13

U12

O(1)

15(1)

34(1)

64(2)

11(1)

16(1)

6(1)

O(2)

24(1)

32(1)

59(2)

0(1)

27(1)

2(1)

O(3)

52(2)

36(1)

40(1)

2(1)

22(1)

10(1)

C(24)

75(3)

54(3)

41(2)

5(2)

29(2)

-4(2)

C(22)

52(3)

106(5)

45(3)

17(3)

-1(2)

-30(3)

C(21)

105(5)

86(4)

90(4)

19(4)

1(4)

41(4)

C(23)

83(4)

77(3)

47(2)

5(2)

21(3)

17(3)

244

C(16)

19(2)

28(2)

48(2)

4(2)

16(2)

0(2)

C(17)

22(2)

27(2)

48(2)

8(2)

13(2)

7(2)

C(1)

16(2)

32(2)

38(2)

2(2)

11(1)

2(2)

C(2)

20(2)

29(2)

43(2)

3(2)

17(2)

-2(1)

C(3)

20(2)

29(2)

34(2)

2(1)

11(1)

4(1)

C(4)

24(2)

29(2)

68(3)

14(2)

24(2)

4(2)

C(5)

23(2)

32(2)

48(2)

15(2)

18(2)

7(2)

C(6)

12(2)

25(2)

33(2)

-2(1)

8(1)

1(1)

C(14)

14(2)

24(2)

32(2)

-1(1)

10(1)

0(1)

C(15)

15(2)

24(2)

29(2)

-2(1)

9(1)

1(1)

C(13)

20(2)

32(2)

44(2)

8(2)

17(2)

6(2)

C(12)

21(2)

30(2)

50(2)

4(2)

21(2)

-1(2)

C(11)

16(2)

28(2)

37(2)

-1(1)

12(1)

2(1)

C(7)

14(2)

28(2)

37(2)

1(2)

10(1)

2(1)

C(8)

20(2)

34(2)

53(2)

9(2)

14(2)

3(2)

C(9)

21(2)

44(2)

56(2)

12(2)

18(2)

10(2)

C(10)

14(2)

32(2)

41(2)

-3(2)

13(1)

-1(1)

C(18)

23(2)

45(2)

39(2)

-7(2)

12(2)

3(2)

C(19)

14(2)

55(2)

56(2)

-6(2)

16(2)

-2(2)

C(20)

20(2)

103(4)

82(3)

-50(3)

20(2)

-19(2)

C(25)

56(3)

77(4)

59(3)

18(3)

24(2)

-3(3)

Table 8.75 Hydrogen coordinates ( x 104) and isotropic displacement parameters (2


x 103) for ethinylestradiol pentan-2-ol solvate.
Atom

U(eq)

H(1O1)

475

1050

7763

48

H(2O2)

-8691

4362

7356

45

H(3O3)

1105

-2319

7857

53

H(24)

2206

-2671

9395

71

H(22A)

3579

162

10046

95

H(22B)

2719

1200

9073

95

H(21A)

3146

2513

11059

134

H(21B)

2422

3603

10050

134

245

H(21C)

3764

3361

10349

134

H(23A)

2095

-566

10616

91

H(23B)

1221

686

9753

91

H(16)

-3150

385

7590

40

H(17)

-1221

-217

7864

42

H(2)

-931

5083

6885

38

H(4A)

-2716

6780

5869

49

H(4B)

-2789

7389

6923

49

H(5A)

-4592

5703

5274

43

H(5B)

-4623

7738

5753

43

H(6)

-4543

6210

7300

31

H(14)

-4923

2755

6175

30

H(13A)

-4632

3107

8264

40

H(13B)

-4819

1147

7669

40

H(12A)

-6706

2023

6642

41

H(12B)

-6591

2290

7789

41

H(7)

-6474

4832

5662

34

H(8A)

-6812

7963

5259

46

H(8B)

-6337

8631

6415

46

H(9A)

-8133

8331

6428

51

H(9B)

-8571

7439

5319

51

H(18A)

-6533

7425

7898

46

H(18B)

-5436

5968

8391

46

H(18C)

-6674

5501

8516

46

H(20)

-9374

1834

4531

88

H(25A)

543

-4386

9047

82

H(25B)

-143

-2493

9228

82

H(25C)

874

-3486

10196

82

246

16) Ethinylestradiol DMSO solvate.

Table 8.76 Crystal data and structure refinement for ethinylestradiol DMSO solvate.
Identification code

EE_4

Empirical formula

C24 H36 O4 S2

Formula weight

452.65

Temperature

150.0 K

Wavelength

0.7107

Crystal system

Orthorhombic

Space group

P212121

Unit cell dimensions

a = 6.9652(3)
b = 10.9689(3)
c = 31.2143(11)

Volume

2384.78(15) 3

Density (calculated)

1.261 Mg/m3

Absorption coefficient

0.250 mm-1

F(000)

976

Crystal size

0.50 x 0.40 x 0.20 mm

Theta range for data collection

2.9905 to 29.0380

Index ranges

-9<=h<=5; -8<=k<=13; -21<=l<=42

Reflections collected

7212

247

Independent reflections

4224 [Rint = 0.0204]

Reflections observed (>2)

3945

Data Completeness

0.998

Absorption correction

Semi-empirical from equivalents

Max. and min. transmission

1.00000 and 0.93708

Refinement method

Full-matrix least-squares on F2

Data / restraints / parameters

4224 / 0 / 277

Goodness-of-fit on F2

1.119

Final R indices [I>2(I)]

R1 = 0.0432 wR2 = 0.0924

R indices (all data)

R1 = 0.0476 wR2 = 0.0981

Absolute structure parameter

0.03(9)

Largest diff. peak and hole

0.249 and -0.303 e.-3

Table 8.77 Atomic coordinates ( x 104) and equivalent isotropic displacement


parameters (2 x 103) for ethinylestradiol DMSO solvate.U(eq) is defined as one
third of the trace of the orthogonalized Uij tensor.
Atom

U(eq)

S(1)

7675(1)

9230(1)

8995(1)

24(1)

O(4)

9370(3)

10076(2)

8985(1)

29(1)

S(2)

8734(2)

5225(1)

9794(1)

41(1)

O(3)

8878(4)

6056(2)

10173(1)

45(1)

O(2)

9367(3)

2547(2)

8970(1)

24(1)

O(1)

6713(3)

1723(2)

5499(1)

29(1)

C(1)

6782(4)

1895(2)

5931(1)

19(1)

C(2)

6855(4)

3042(2)

6118(1)

19(1)

C(3)

6894(4)

3183(2)

6564(1)

15(1)

C(4)

6954(4)

4464(2)

6740(1)

20(1)

C(5)

6484(4)

4530(2)

7218(1)

20(1)

C(6)

7582(4)

3556(2)

7462(1)

15(1)

C(7)

7380(4)

3644(2)

7945(1)

16(1)

C(8)

7941(4)

4818(2)

8176(1)

20(1)

C(9)

8206(4)

4431(2)

8651(1)

21(1)

C(10)

8046(4)

3013(2)

8663(1)

18(1)

248

C(11)

8504(4)

2656(2)

8188(1)

16(1)

C(12)

7823(4)

1401(2)

8040(1)

19(1)

C(13)

7999(4)

1282(2)

7550(1)

18(1)

C(14)

6887(4)

2285(2)

7317(1)

16(1)

C(15)

6900(4)

2155(2)

6832(1)

16(1)

C(16)

6797(4)

1014(2)

6634(1)

18(1)

C(17)

6737(4)

869(2)

6195(1)

21(1)

C(18)

10701(4)

2767(3)

8124(1)

22(1)

C(19)

6067(4)

2660(2)

8785(1)

20(1)

C(20)

4492(5)

2409(3)

8888(1)

28(1)

C(21)

10539(7)

4118(4)

9867(1)

62(1)

C(22)

6705(7)

4300(4)

9884(2)

73(1)

C(23)

8017(5)

8141(3)

8573(1)

32(1)

C(24)

8116(6)

8219(3)

9429(1)

38(1)

Table 8.78 Bond lengths [] and angles [] for ethinylestradiol DMSO solvate.
Bond lengths []
S(1)-O(4)

1.502(2)

S(1)-C(24)

1.777(3)

S(1)-C(23)

1.795(3)

S(2)-O(3)

1.497(2)

S(2)-C(22)

1.762(5)

S(2)-C(21)

1.763(4)

O(2)-C(10)

1.423(3)

O(1)-C(1)

1.363(3)

C(1)-C(2)

1.389(4)

C(1)-C(17)

1.394(4)

C(2)-C(3)

1.401(4)

C(3)-C(15)

1.403(3)

C(3)-C(4)

1.509(3)

C(4)-C(5)

1.529(4)

C(5)-C(6)

1.519(4)

C(6)-C(7)

1.518(4)

C(6)-C(14)

1.544(3)

C(7)-C(8)

1.527(4)

C(7)-C(11)

1.537(4)

C(8)-C(9)

1.553(4)

C(9)-C(10)

1.559(3)

C(10)-C(19)

1.481(4)

C(10)-C(11)

1.568(4)

C(11)-C(12)

1.527(3)

C(11)-C(18)

1.548(4)

C(12)-C(13)

1.539(3)

C(13)-C(14)

1.531(3)

C(14)-C(15)

1.520(3)

C(15)-C(16)

1.398(4)

C(16)-C(17)

1.382(4)

C(19)-C(20)

1.176(4)

249

Bond angles []
O(4)-S(1)-C(24)

105.42(15)

O(4)-S(1)-C(23)

106.95(14)

C(24)-S(1)-C(23)

96.94(15)

O(3)-S(2)-C(22)

106.21(19)

O(3)-S(2)-C(21)

105.68(17)

C(22)-S(2)-C(21)

98.9(2)

O(1)-C(1)-C(2)

122.9(2)

O(1)-C(1)-C(17)

118.2(2)

C(2)-C(1)-C(17)

118.9(2)

C(1)-C(2)-C(3)

121.2(2)

C(2)-C(3)-C(15)

120.2(2)

C(2)-C(3)-C(4)

117.6(2)

C(15)-C(3)-C(4)

122.1(2)

C(3)-C(4)-C(5)

113.1(2)

C(6)-C(5)-C(4)

110.4(2)

C(7)-C(6)-C(5)

114.0(2)

C(7)-C(6)-C(14)

108.6(2)

C(5)-C(6)-C(14)

109.3(2)

C(6)-C(7)-C(8)

120.0(2)

C(6)-C(7)-C(11)

113.4(2)

C(8)-C(7)-C(11)

103.4(2)

C(7)-C(8)-C(9)

104.6(2)

C(8)-C(9)-C(10)

106.7(2)

O(2)-C(10)-C(19)

109.6(2)

O(2)-C(10)-C(9)

109.1(2)

C(19)-C(10)-C(9)

109.5(2)

O(2)-C(10)-C(11)

114.5(2)

C(19)-C(10)-C(11)

111.5(2)

C(9)-C(10)-C(11)

102.3(2)

C(12)-C(11)-C(7)

109.2(2)

C(12)-C(11)-C(18)

109.9(2)

C(7)-C(11)-C(18)

112.6(2)

C(12)-C(11)-C(10)

116.6(2)

C(7)-C(11)-C(10)

100.8(2)

C(18)-C(11)-C(10)

107.7(2)

C(11)-C(12)-C(13)

110.6(2)

C(14)-C(13)-C(12)

111.9(2)

C(15)-C(14)-C(13)

113.9(2)

C(15)-C(14)-C(6)

112.0(2)

C(13)-C(14)-C(6)

110.5(2)

C(16)-C(15)-C(3)

117.2(2)

C(16)-C(15)-C(14)

121.5(2)

C(3)-C(15)-C(14)

121.2(2)

C(17)-C(16)-C(15)

122.8(2)

C(16)-C(17)-C(1)

119.5(2)

C(20)-C(19)-C(10)

178.2(3)

Table 8.79 Anisotropic displacement parameters (2 x 103) for ethinylestradiol


DMSO solvate. The anisotropic displacement factor exponent takes the form: -2 2
[h2 a*2 U11 + ... + 2 h k a* b* U12].
Atom

U11

U22

U33

U23

U13

U12

S(1)

26(1)

22(1)

24(1)

4(1)

1(1)

4(1)

O(4)

33(1)

22(1)

32(1)

2(1)

-2(1)

-1(1)

S(2)

78(1)

26(1)

19(1)

-5(1)

-6(1)

1(1)
250

O(3)

85(2)

29(1)

22(1)

-10(1)

-2(1)

2(1)

O(2)

30(1)

22(1)

19(1)

2(1)

-9(1)

-4(1)

O(1)

49(2)

24(1)

13(1)

0(1)

0(1)

0(1)

C(1)

21(2)

24(1)

13(1)

-1(1)

0(1)

0(1)

C(2)

20(2)

19(1)

17(1)

6(1)

3(1)

1(1)

C(3)

11(1)

17(1)

17(1)

2(1)

3(1)

0(1)

C(4)

26(2)

14(1)

18(1)

2(1)

-2(1)

0(1)

C(5)

22(2)

16(1)

20(1)

-1(1)

0(1)

2(1)

C(6)

13(1)

16(1)

17(1)

0(1)

0(1)

1(1)

C(7)

15(1)

16(1)

16(1)

1(1)

3(1)

-1(1)

C(8)

24(2)

17(1)

19(1)

0(1)

1(1)

-2(1)

C(9)

28(2)

19(1)

15(1)

-4(1)

-1(1)

-4(1)

C(10)

22(2)

19(1)

14(1)

1(1)

-3(1)

-4(1)

C(11)

18(2)

15(1)

14(1)

1(1)

1(1)

-1(1)

C(12)

22(2)

18(1)

16(1)

3(1)

-2(1)

0(1)

C(13)

23(2)

14(1)

16(1)

0(1)

1(1)

-1(1)

C(14)

15(1)

15(1)

17(1)

0(1)

2(1)

0(1)

C(15)

13(1)

19(1)

15(1)

2(1)

0(1)

1(1)

C(16)

19(2)

16(1)

20(1)

3(1)

0(1)

-1(1)

C(17)

24(2)

17(1)

20(1)

-3(1)

-2(1)

1(1)

C(18)

20(2)

23(1)

22(2)

1(1)

-3(1)

1(1)

C(19)

28(2)

21(1)

12(1)

-1(1)

0(1)

-2(1)

C(20)

30(2)

37(2)

18(2)

-4(1)

1(1)

-8(2)

C(21)

74(3)

51(2)

62(3)

-29(2)

-6(3)

10(2)

C(22)

78(4)

71(3)

69(3)

-24(3)

1(3)

-9(3)

C(23)

29(2)

36(2)

32(2)

-7(1)

2(2)

-3(2)

C(24)

49(2)

36(2)

28(2)

13(2)

0(2)

3(2)

251

Table 8.80 Hydrogen coordinates ( x 104) and isotropic displacement parameters (2


x 103) for ethinylestradiol DMSO solvate.
Atom

U(eq)

H(2)

9280

1802

8979

31

H(1)

6717

2386

5378

37

H(2A)

6879

3730

5944

24

H(4A)

6044

4964

6583

25

H(4B)

8225

4801

6693

25

H(5A)

6823

5329

7327

25

H(5B)

5116

4414

7259

25

H(6)

8946

3632

7389

20

H(7)

6020

3505

8009

20

H(8A)

6938

5427

8150

26

H(8B)

9125

5147

8061

26

H(9A)

7219

4797

8829

27

H(9B)

9451

4690

8756

27

H(12A)

6495

1283

8125

24

H(12B)

8590

774

8177

24

H(13A)

9342

1325

7470

23

H(13B)

7511

492

7462

23

H(14)

5545

2213

7408

20

H(16)

6767

321

6806

24

H(17)

6667

93

6075

27

H(18A)

11331

2094

8262

29

H(18B)

11143

3518

8247

29

H(18C)

10992

2759

7823

29

H(20)

3246

2211

8969

37

H(21A)

11777

4502

9855

81

H(21B)

10448

3517

9644

81

H(21C)

10376

3732

10141

81

H(22A)

6769

3959

10167

94

H(22B)

6679

3655

9676

94

H(22C)

5563

4784

9857

94

252

H(23A)

7907

8542

8301

42

H(23B)

7059

7515

8594

42

H(23C)

9270

7782

8598

42

H(24A)

9377

7874

9400

49

H(24B)

7178

7578

9426

49

H(24C)

8033

8659

9694

49

253

17) 1-[(1E,3E,5E)-4,6-bis(phenylsulfonyl)hexa-1,3,5-trien-1-yl]-4-benzene.

Table 8.81 Crystal data and structure refinement for 1-[(1E,3E,5E)-4,6bis(phenylsulfonyl)hexa-1,3,5-trien-1-yl]-4-benzene.


Identification code

phsulf_1

Empirical formula

C24 H20 O4 S2

Formula weight

436.52

Temperature

299.1 K

Wavelength

0.7107

Crystal system

Monoclinic

Space group

P21

Unit cell dimensions

a = 5.9436(3)
b = 14.0768(8), = 100.537(5)
c = 13.0684(8)

Volume

1074.95(11) 3

Density (calculated)

1.349 Mg/m3

Absorption coefficient

0.276 mm-1

F(000)

456
254

Crystal size

0.50 x 0.40 x 0.20 mm

Theta range for data collection

3.1647 to 29.0854

Index ranges

-7<=h<=6; -7<=k<=18; -17<=l<=12

Reflections collected

5206

Independent reflections

2704 [Rint = 0.0344]

Reflections observed (>2)

2287

Data Completeness

0.999

Absorption correction

Semi-empirical from equivalents

Max. and min. transmission

1.00000 and 0.88884

Refinement method

Full-matrix least-squares on F2

Data / restraints / parameters

2704 / 1 / 271

Goodness-of-fit on F2

1.059

Final R indices [I>2(I)]

R1 = 0.0540 wR2 = 0.1286

R indices (all data)

R1 = 0.0666 wR2 = 0.1436

Absolute structure parameter

-0.02(12)

Largest diff. peak and hole

0.478 and -0.225 e.-3

Table 8.82 Atomic coordinates ( x 104) and equivalent isotropic displacement


parameters (2 x 103) for 1-[(1E,3E,5E)-4,6-bis(phenylsulfonyl)hexa-1,3,5-trien-1yl]-4-benzene. U (eq) is defined as one third of the trace of the orthogonalized Uij
tensor.
Atom

U(eq)

S(1)

-3021(2)

7800(1)

6061(1)

45(1)

S(2)

1747(2)

8008(1)

9515(1)

49(1)

O(3)

-641(5)

7965(3)

9588(2)

55(1)

O(1)

-5390(5)

7662(3)

6116(3)

57(1)

O(4)

3429(6)

7793(3)

10423(3)

67(1)

O(2)

-1990(6)

7248(3)

5350(3)

58(1)

C(1)

-2706(8)

9003(4)

5778(4)

41(1)

C(2)

-4245(9)

9660(5)

6011(5)

59(2)

C(3)

-3940(11)

10620(5)

5786(6)

75(2)

C(4)

-2116(11)

10890(5)

5323(6)

74(2)

C(5)

-617(11)

10231(5)

5104(6)

76(2)

255

C(6)

-867(9)

9279(4)

5331(5)

65(2)

C(7)

-1405(7)

7677(4)

7323(3)

40(1)

C(8)

652(7)

7300(3)

7509(4)

40(1)

C(9)

2223(7)

7261(4)

8500(4)

43(1)

C(10)

4154(8)

6714(4)

8692(4)

46(1)

C(11)

4858(7)

6010(4)

8055(4)

41(1)

C(12)

6847(8)

5551(4)

8365(4)

47(1)

C(13)

7807(8)

4768(4)

7873(4)

44(1)

C(14)

10038(9)

4464(5)

8297(4)

56(2)

C(15)

11011(10)

3712(5)

7873(5)

62(2)

C(16)

9837(11)

3261(6)

7055(5)

77(2)

C(17)

7628(12)

3524(6)

6599(6)

83(2)

C(18)

6665(9)

4275(5)

7013(4)

65(2)

C(19)

2327(8)

9169(4)

9096(4)

46(1)

C(20)

4567(9)

9495(4)

9299(5)

62(2)

C(21)

5014(11)

10398(5)

9002(6)

78(2)

C(22)

3276(12)

10969(5)

8498(6)

75(2)

C(23)

1091(13)

10628(5)

8311(6)

86(2)

C(24)

595(10)

9730(5)

8588(5)

68(2)

Table 8.83 Bond lengths [] and angles [] for 1-[(1E,3E,5E)-4,6bis(phenylsulfonyl)hexa-1,3,5-trien-1-yl]-4-benzene.


Bond lengths []
S(1)-O(2)

1.432(4)

S(1)-O(1)

1.436(3)

S(1)-C(1)

1.751(5)

S(1)-C(7)

1.758(4)

S(2)-O(4)

1.438(3)

S(2)-O(3)

1.442(3)

S(2)-C(9)

1.756(5)

S(2)-C(19)

1.776(6)

C(1)-C(2)

1.374(7)

C(1)-C(6)

1.386(7)

C(2)-C(3)

1.402(9)

C(3)-C(4)

1.387(9)

C(4)-C(5)

1.353(10)

C(5)-C(6)

1.386(9)

C(7)-C(8)

1.315(6)

C(8)-C(9)

1.452(6)

C(9)-C(10)

1.367(6)

C(10)-C(11)

1.406(7)

C(11)-C(12)

1.344(6)

C(12)-C(13)

1.445(7)

256

C(13)-C(18)

1.388(8)

C(13)-C(14)

1.407(7)

C(14)-C(15)

1.371(8)

C(15)-C(16)

1.327(9)

C(16)-C(17)

1.389(9)

C(17)-C(18)

1.360(9)

C(19)-C(24)

1.370(7)

C(19)-C(20)

1.387(7)

C(20)-C(21)

1.369(10)

C(21)-C(22)

1.377(10)

C(22)-C(23)

1.364(9)

C(23)-C(24)

1.362(9)

Bond angles []
O(2)-S(1)-O(1)

119.9(2)

O(2)-S(1)-C(1)

108.2(3)

O(1)-S(1)-C(1)

106.6(2)

O(2)-S(1)-C(7)

109.3(2)

O(1)-S(1)-C(7)

108.2(2)

C(1)-S(1)-C(7)

103.4(2)

O(4)-S(2)-O(3)

118.7(2)

O(4)-S(2)-C(9)

108.3(2)

O(3)-S(2)-C(9)

108.8(2)

O(4)-S(2)-C(19)

107.7(3)

O(3)-S(2)-C(19)

107.9(2)

C(9)-S(2)-C(19)

104.6(2)

C(2)-C(1)-C(6)

120.9(5)

C(2)-C(1)-S(1)

120.2(4)

C(6)-C(1)-S(1)

118.9(4)

C(1)-C(2)-C(3)

119.1(6)

C(4)-C(3)-C(2)

119.8(6)

C(5)-C(4)-C(3)

120.1(6)

C(4)-C(5)-C(6)

121.2(6)

C(1)-C(6)-C(5)

119.0(6)

C(8)-C(7)-S(1)

123.0(4)

C(7)-C(8)-C(9)

127.3(4)

C(10)-C(9)-C(8)

124.5(5)

C(10)-C(9)-S(2)

116.4(4)

C(8)-C(9)-S(2)

119.0(3)

C(9)-C(10)-C(11)

128.2(5)

C(12)-C(11)-C(10)

120.1(5)

C(11)-C(12)-C(13)

129.1(5)

C(18)-C(13)-C(14)

117.0(5)

C(18)-C(13)-C(12)

124.6(5)

C(14)-C(13)-C(12)

118.5(5)

C(15)-C(14)-C(13)

120.8(6)

C(16)-C(15)-C(14)

119.8(6)

C(15)-C(16)-C(17)

122.3(7)

C(18)-C(17)-C(16)

118.1(7)

C(17)-C(18)-C(13)

122.1(5)

C(24)-C(19)-C(20)

120.8(6)

C(24)-C(19)-S(2)

120.6(4)

C(20)-C(19)-S(2)

118.6(4)

C(21)-C(20)-C(19)

118.8(5)

C(20)-C(21)-C(22)

120.7(6)

C(23)-C(22)-C(21)

119.1(7)

Table 8.84 Anisotropic displacement parameters (2 x 103) for 1-[(1E,3E,5E)-4,6bis(phenylsulfonyl)hexa-1,3,5-trien-1-yl]-4-benzene. The anisotropic displacement
factor exponent takes the form: -2 2 [h2 a*2 U11 + ... + 2 h k a* b* U12].

257

Atom

U11

U22

U33

U23

U13

U12

S(1)

41(1)

35(1)

57(1)

-2(1)

7(1)

-3(1)

S(2)

46(1)

51(1)

48(1)

1(1)

9(1)

14(1)

O(3)

47(2)

64(3)

57(2)

-4(2)

19(1)

8(2)

O(1)

36(2)

57(3)

76(2)

5(2)

4(1)

-10(2)

O(4)

70(2)

79(3)

47(2)

1(2)

1(2)

30(2)

O(2)

73(2)

41(2)

60(2)

-14(2)

13(2)

0(2)

C(1)

40(3)

37(3)

45(3)

6(2)

5(2)

1(2)

C(2)

52(3)

47(4)

77(4)

11(3)

9(3)

4(3)

C(3)

78(4)

53(4)

94(5)

11(4)

12(4)

24(3)

C(4)

77(4)

49(4)

90(5)

24(4)

-2(4)

-7(3)

C(5)

68(4)

61(4)

103(5)

24(4)

28(4)

-11(4)

C(6)

63(4)

44(4)

95(5)

5(3)

30(3)

-4(3)

C(7)

35(2)

37(3)

48(2)

-3(2)

10(2)

-2(2)

C(8)

47(3)

26(2)

46(3)

-1(2)

11(2)

-1(2)

C(9)

47(2)

29(3)

56(3)

5(2)

17(2)

6(2)

C(10)

46(3)

44(3)

49(3)

-1(3)

10(2)

8(2)

C(11)

41(2)

36(3)

47(3)

7(2)

8(2)

5(2)

C(12)

49(3)

40(3)

53(3)

8(3)

14(2)

6(2)

C(13)

42(3)

42(3)

54(3)

10(3)

22(2)

9(2)

C(14)

51(3)

60(4)

58(3)

9(3)

12(2)

14(3)

C(15)

52(3)

67(4)

70(4)

15(4)

17(3)

25(3)

C(16)

88(4)

69(5)

76(4)

8(4)

25(3)

29(4)

C(17)

104(5)

75(5)

70(4)

-9(4)

17(4)

23(4)

C(18)

63(3)

68(5)

63(4)

-6(3)

9(3)

18(3)

C(19)

45(3)

43(3)

49(3)

-9(3)

5(2)

11(2)

C(20)

47(3)

60(4)

74(4)

-17(4)

3(3)

13(3)

C(21)

61(4)

61(5)

112(6)

-27(4)

22(4)

-4(3)

C(22)

94(5)

46(4)

83(5)

-11(4)

12(4)

-9(4)

C(23)

86(5)

43(4)

114(6)

2(4)

-20(4)

5(4)

C(24)

57(3)

51(4)

87(4)

4(4)

-12(3)

7(3)

258

Table 8.85 Hydrogen coordinates ( x 104) and isotropic displacement parameters


(2 x 103) for 1-[(1E,3E,5E)-4,6-bis(phenylsulfonyl)hexa-1,3,5-trien-1-yl]-4benzene.
Atom

U(eq)

H(2)

-5471

9471

6314

77

H(3)

-4957

11074

5946

98

H(4)

-1924

11525

5163

97

H(5)

602

10420

4797

99

H(6)

184

8832

5185

85

H(7)

-2035

7888

7883

52

H(8)

1158

7027

6944

52

H(10)

5125

6820

9325

60

H(11)

3945

5863

7418

54

H(12)

7731

5767

8982

61

H(14)

10862

4777

8873

73

H(15)

12490

3519

8157

81

H(16)

10516

2750

6777

99

H(17)

6832

3197

6027

108

H(18)

5194

4464

6710

84

H(20)

5744

9107

9632

80

H(21)

6505

10628

9141

101

H(22)

3589

11579

8289

98

H(23)

-89

11019

7986

112

H(24)

-897

9502

8435

88

259

18) 1-[(1E,3E,5E)-4,6-bis(phenylsulfonyl)hexa-1,3,5-trien-1-yl]-4methoxybenzene.

Table 8.86 Crystal data and structure refinement for 1-[(1E,3E,5E)-4,6bis(phenylsulfonyl)hexa-1,3,5-trien-1-yl]-4-methoxybenzene.


Identification code

phsulf_2

Empirical formula

C25 H22 O5 S2

Formula weight

466.55

Temperature

150.0 K

Wavelength

0.7107

Crystal system

Monoclinic

Space group

P21/c

Unit cell dimensions

a = 5.84331(18)
b = 25.5606(8), = 90.258(3)
c = 14.9540(5)

Volume

2233.49(12) 3

Density (calculated)

1.387 Mg/m3

Absorption coefficient

0.274 mm-1

260

F(000)

976

Crystal size

0.50 x 0.25 x 0.20 mm

Theta range for data collection

3.1502 to 29.1677

Index ranges

-7<=h<=7; -34<=k<=34; -20<=l<=20

Reflections collected

32900

Independent reflections

4078 [Rint = 0.0516]

Reflections observed (>2)

3615

Data Completeness

0.999

Absorption correction

Semi-empirical from equivalents

Max. and min. transmission

1.00000 and 0.98856

Refinement method

Full-matrix least-squares on F2

Data / restraints / parameters

4078 / 0 / 291

Goodness-of-fit on F2

1.018

Final R indices [I>2(I)]

R1 = 0.0384 wR2 = 0.0838

R indices (all data)

R1 = 0.0463 wR2 = 0.0875

Largest diff. peak and hole

0.341 and -0.328 e.-3

Table 8.87 Atomic coordinates ( x 104) and equivalent isotropic displacement


parameters (2 x 103) for1-[(1E,3E,5E)-4,6-bis(phenylsulfonyl)hexa-1,3,5-trien-1yl]-4-methoxybenzene. U(eq) is defined as one third of the trace of the
orthogonalized Uij tensor.
Atom

U(eq)

S(1)

1960(1)

6051(1)

4947(1)

24(1)

S(2)

5195(1)

6598(1)

2097(1)

23(1)

O(2)

4415(3)

6043(1)

4976(1)

30(1)

O(4)

7592(3)

6482(1)

2030(1)

31(1)

O(3)

3711(3)

6487(1)

1352(1)

31(1)

O(5)

-9912(3)

4151(1)

665(1)

38(1)

O(1)

733(3)

5756(1)

5609(1)

36(1)

C(1)

-9532(6)

4200(1)

-275(2)

47(1)

C(2)

-8338(4)

4368(1)

1232(2)

28(1)

C(3)

-8856(4)

4346(1)

2135(2)

27(1)

C(4)

-7374(4)

4555(1)

2761(2)

26(1)

261

C(5)

-5346(4)

4802(1)

2506(2)

23(1)

C(6)

-4853(4)

4818(1)

1593(2)

31(1)

C(7)

-6311(5)

4600(1)

964(2)

32(1)

C(8)

-3885(4)

5028(1)

3193(2)

24(1)

C(9)

-2019(4)

5328(1)

3090(2)

23(1)

C(10)

-848(4)

5533(1)

3857(2)

23(1)

C(11)

1003(4)

5851(1)

3872(2)

21(1)

C(12)

2101(4)

6076(1)

3088(2)

21(1)

C(13)

4158(4)

6295(1)

3058(2)

21(1)

C(14)

4940(4)

7268(1)

2371(2)

22(1)

C(15)

2966(4)

7534(1)

2135(2)

27(1)

C(16)

2781(5)

8058(1)

2349(2)

34(1)

C(17)

4527(5)

8308(1)

2807(2)

36(1)

C(18)

6470(5)

8036(1)

3053(2)

36(1)

C(19)

6696(4)

7515(1)

2836(2)

28(1)

C(20)

1017(4)

6708(1)

5015(2)

25(1)

C(21)

-1131(4)

6805(1)

5366(2)

35(1)

C(22)

-1874(5)

7319(1)

5425(2)

48(1)

C(23)

-512(6)

7724(1)

5130(2)

48(1)

C(24)

1597(6)

7622(1)

4781(2)

42(1)

C(25)

2393(5)

7113(1)

4719(2)

30(1)

Table 8.88 Bond lengths [] and angles [] for 11-[(1E,3E,5E)-4,6bis(phenylsulfonyl)hexa-1,3,5-trien-1-yl]-4-methoxybenzene.


Bond lengths []
S(1)-O(2)

1.4351(17)

S(1)-O(1)

1.4376(17)

S(1)-C(20)

1.769(2)

S(1)-C(11)

1.775(2)

S(2)-O(4)

1.4356(17)

S(2)-O(3)

1.4372(18)

S(2)-C(13)

1.745(2)

S(2)-C(14)

1.766(2)

O(5)-C(2)

1.367(3)

O(5)-C(1)

1.430(3)

C(2)-C(7)

1.385(3)

C(2)-C(3)

1.386(3)

C(3)-C(4)

1.381(3)

C(4)-C(5)

1.397(3)

C(5)-C(6)

1.396(3)

C(5)-C(8)

1.453(3)

262

C(6)-C(7)

1.383(4)

C(8)-C(9)

1.343(3)

C(9)-C(10)

1.432(3)

C(10)-C(11)

1.354(3)

C(11)-C(12)

1.456(3)

C(12)-C(13)

1.327(3)

C(14)-C(15)

1.384(3)

C(14)-C(19)

1.389(3)

C(15)-C(16)

1.383(4)

C(16)-C(17)

1.383(4)

C(17)-C(18)

1.380(4)

C(18)-C(19)

1.380(4)

C(20)-C(21)

1.385(3)

C(20)-C(25)

1.386(3)

C(21)-C(22)

1.386(4)

C(22)-C(23)

1.379(5)

C(23)-C(24)

1.366(4)

C(24)-C(25)

1.384(4)

Bond angles []
O(2)-S(1)-O(1)

118.27(11)

O(2)-S(1)-C(20)

108.81(11)

O(1)-S(1)-C(20)

107.51(12)

O(2)-S(1)-C(11)

109.55(11)

O(1)-S(1)-C(11)

108.46(11)

C(20)-S(1)-C(11)

103.18(11)

O(4)-S(2)-O(3)

119.36(11)

O(4)-S(2)-C(13)

107.96(11)

O(3)-S(2)-C(13)

109.84(11)

O(4)-S(2)-C(14)

107.44(11)

O(3)-S(2)-C(14)

108.73(11)

C(13)-S(2)-C(14)

102.11(10)

C(2)-O(5)-C(1)

117.8(2)

O(5)-C(2)-C(7)

124.6(2)

O(5)-C(2)-C(3)

116.0(2)

C(7)-C(2)-C(3)

119.4(2)

C(4)-C(3)-C(2)

120.3(2)

C(3)-C(4)-C(5)

121.3(2)

C(6)-C(5)-C(4)

117.4(2)

C(6)-C(5)-C(8)

123.8(2)

C(4)-C(5)-C(8)

118.8(2)

C(7)-C(6)-C(5)

121.6(2)

C(6)-C(7)-C(2)

120.0(2)

C(9)-C(8)-C(5)

128.4(2)

C(8)-C(9)-C(10)

120.2(2)

C(11)-C(10)-C(9)

127.8(2)

C(10)-C(11)-C(12)

125.4(2)

C(10)-C(11)-S(1)

115.87(18)

C(12)-C(11)-S(1)

118.47(17)

C(13)-C(12)-C(11)

126.6(2)

C(12)-C(13)-S(2)

122.30(19)

C(15)-C(14)-C(19)

121.2(2)

C(15)-C(14)-S(2)

119.23(18)

C(19)-C(14)-S(2)

119.57(19)

C(16)-C(15)-C(14)

118.9(2)

C(15)-C(16)-C(17)

120.3(2)

C(18)-C(17)-C(16)

120.2(2)

C(19)-C(18)-C(17)

120.3(3)

C(18)-C(19)-C(14)

119.1(2)

C(21)-C(20)-C(25)

120.9(2)

C(21)-C(20)-S(1)

118.4(2)

C(25)-C(20)-S(1)

120.68(19)

C(20)-C(21)-C(22)

118.7(3)

C(23)-C(22)-C(21)

120.6(3)

263

C(24)-C(23)-C(22)

120.1(3)

C(24)-C(25)-C(20)

119.1(3)

C(23)-C(24)-C(25)

120.6(3)

Table 8.89 Anisotropic displacement parameters (2 x 103) for1-[(1E,3E,5E)-4,6bis(phenylsulfonyl)hexa-1,3,5-trien-1-yl]-4-methoxybenzene. The anisotropic


displacement factor exponent takes the form: -2 2 [h2 a*2 U11 + ... + 2 h k a* b*
U12].
Atom

U11

U22

U33

U23

U13

U12

S(1)

24(1)

28(1)

20(1)

5(1)

-1(1)

-4(1)

S(2)

25(1)

23(1)

20(1)

0(1)

3(1)

0(1)

O(2)

25(1)

39(1)

27(1)

5(1)

-4(1)

-1(1)

O(4)

28(1)

31(1)

33(1)

4(1)

11(1)

4(1)

O(3)

40(1)

32(1)

22(1)

-2(1)

-1(1)

-4(1)

O(5)

37(1)

40(1)

37(1)

-9(1)

-3(1)

-11(1)

O(1)

36(1)

44(1)

26(1)

14(1)

-1(1)

-11(1)

C(1)

60(2)

47(2)

35(2)

-9(1)

-7(1)

-15(2)

C(2)

28(1)

19(1)

36(1)

-4(1)

-2(1)

0(1)

C(3)

23(1)

22(1)

36(1)

-2(1)

8(1)

-4(1)

C(4)

30(1)

19(1)

28(1)

-1(1)

7(1)

-1(1)

C(5)

24(1)

15(1)

29(1)

0(1)

1(1)

2(1)

C(6)

29(1)

30(1)

33(1)

4(1)

4(1)

-8(1)

C(7)

38(2)

34(1)

25(1)

2(1)

3(1)

-8(1)

C(8)

27(1)

17(1)

27(1)

2(1)

2(1)

3(1)

C(9)

26(1)

17(1)

27(1)

2(1)

1(1)

2(1)

C(10)

24(1)

20(1)

26(1)

4(1)

2(1)

2(1)

C(11)

23(1)

19(1)

22(1)

2(1)

-3(1)

1(1)

C(12)

24(1)

16(1)

22(1)

-1(1)

-1(1)

2(1)

C(13)

25(1)

18(1)

21(1)

0(1)

2(1)

4(1)

C(14)

24(1)

22(1)

18(1)

4(1)

3(1)

-2(1)

C(15)

26(1)

31(1)

24(1)

0(1)

-2(1)

1(1)

C(16)

39(2)

28(1)

36(2)

5(1)

-3(1)

10(1)

C(17)

49(2)

20(1)

41(2)

1(1)

2(1)

1(1)

C(18)

38(2)

27(1)

45(2)

1(1)

-5(1)

-10(1)

264

C(19)

24(1)

27(1)

34(1)

6(1)

-4(1)

-3(1)

C(20)

29(1)

30(1)

16(1)

-5(1)

-4(1)

-1(1)

C(21)

27(1)

49(2)

30(1)

-12(1)

-2(1)

-5(1)

C(22)

34(2)

68(2)

42(2)

-29(2)

-8(1)

14(2)

C(23)

61(2)

39(2)

44(2)

-20(1)

-16(2)

15(2)

C(24)

68(2)

29(2)

28(2)

-6(1)

-5(1)

-4(1)

C(25)

39(2)

32(1)

20(1)

-5(1)

4(1)

-4(1)

Table 8.90 Hydrogen coordinates ( x 104) and isotropic displacement parameters (2


x 103) for 1-[(1E,3E,5E)-4,6-bis(phenylsulfonyl)hexa-1,3,5-trien-1-yl]-4methoxybenzene.
Atom

U(eq)

H(1A)

-9453

4564

-432

62

H(1B)

-10770

4038

-596

62

H(1C)

-8119

4032

-429

62

H(3)

-10209

4188

2320

35

H(4)

-7733

4532

3365

33

H(6)

-3512

4979

1404

40

H(7)

-5931

4610

361

42

H(8)

-4296

4955

3780

31

H(9)

-1486

5402

2519

30

H(10)

-1428

5435

4410

30

H(12)

1277

6065

2555

27

H(13)

5078

6286

3567

28

H(15)

1782

7363

1837

35

H(16)

1477

8244

2184

45

H(17)

4391

8661

2950

47

H(18)

7632

8206

3366

47

H(19)

8006

7331

3000

37

H(21)

-2055

6532

5558

46

H(22)

-3305

7391

5665

63

H(23)

-1031

8067

5170

62

H(24)

2507

7897

4583

54

H(25)

3830

7045

4482

40
265

19) 1-[(1E,3E,5E)-4,6-bis(phenylsulfonyl)hexa-1,3,5-trien-1-yl]-4nitrobenzene.

Table 8.91 Crystal data and structure refinement for 1-[(1E,3E,5E)-4,6bis(phenylsulfonyl)hexa-1,3,5-trien-1-yl]-4-nitrobenzene.


Identification code

phsulf_3

Empirical formula

C24 H19 N O6 S2

Formula weight

481.52

Temperature

149.9 K

Wavelength

0.7107

Crystal system

Triclinic

Space group

P1

Unit cell dimensions

a = 5.86394(16), = 87.204(3)
b = 8.2153(3), = 77.171(3)
c = 11.8849(4), = 86.386(2)

Volume

556.78(3) 3

Density (calculated)

1.436 Mg/m3
266

Absorption coefficient

0.281 mm-1

F(000)

250

Crystal size

0.40 x 0.20 x 0.20 mm

Theta range for data collection

2.99 to 28.9464

Index ranges

-7<=h<=7; -9<=k<=9; -14<=l<=7

Reflections collected

4109

Independent reflections

2552 [Rint = 0.0125]

Reflections observed (>2)

2466

Data Completeness

0.999

Absorption correction

Semi-empirical from equivalents

Max. and min. transmission

1.00000 and 0.95971

Refinement method

Full-matrix least-squares on F2

Data / restraints / parameters

2552 / 3 / 298

Goodness-of-fit on F2

1.150

Final R indices [I>2(I)]

R1 = 0.0321 wR2 = 0.0961

R indices (all data)

R1 = 0.0335 wR2 = 0.0974

Absolute structure parameter

0.01(8)

Largest diff. peak and hole

0.398 and -0.197 e.-3

Table 8.92 Atomic coordinates ( x 104) and equivalent isotropic displacement


parameters (2 x 103) for1-[(1E,3E,5E)-4,6-bis(phenylsulfonyl)hexa-1,3,5-trien-1yl]-4-nitrobenzene. U(eq) is defined as one third of the trace of the orthogonalized
Uij tensor.
Atom

U(eq)

S(1)

4499(1)

2382(1)

650(1)

20(1)

S(2)

123(1)

7415(1)

2102(1)

23(1)

O(1)

2097(4)

2405(3)

546(2)

25(1)

O(3)

-2183(5)

7482(4)

1888(3)

38(1)

O(2)

6216(4)

1311(3)

-49(2)

27(1)

O(4)

1500(5)

8812(3)

1834(3)

33(1)

O(5)

18184(5)

11561(4)

-3167(3)

48(1)

N(1)

16099(6)

11763(4)

-2675(3)

32(1)

O(6)

15119(6)

13119(3)

-2469(3)

43(1)

267

C(1)

14745(7)

10316(5)

-2340(3)

24(1)

C(2)

15798(6)

8794(5)

-2599(4)

28(1)

C(3)

14500(6)

7432(5)

-2248(4)

27(1)

C(4)

12172(7)

7604(5)

-1644(4)

26(1)

C(5)

11170(7)

9173(5)

-1400(4)

31(1)

C(6)

12446(7)

10525(5)

-1748(4)

28(1)

C(7)

10852(7)

6141(5)

-1301(4)

29(1)

C(8)

8639(7)

6098(5)

-682(4)

30(1)

C(9)

7582(6)

4578(5)

-313(4)

28(1)

C(10)

5452(6)

4408(5)

368(3)

23(1)

C(11)

3950(6)

5757(5)

918(3)

24(1)

C(12)

1675(7)

5724(5)

1390(4)

27(1)

C(13)

-24(6)

6810(5)

3562(4)

27(1)

C(14)

-1808(8)

5810(5)

4118(4)

42(1)

C(15)

-1902(11)

5232(7)

5211(5)

57(2)

C(16)

-253(12)

5628(8)

5753(5)

66(2)

C(17)

1530(12)

6646(9)

5249(6)

73(2)

C(18)

1662(8)

7259(6)

4098(4)

42(1)

C(19)

4589(6)

1975(4)

2122(3)

21(1)

C(20)

6682(6)

1371(5)

2385(4)

26(1)

C(21)

6732(7)

1023(5)

3524(4)

33(1)

C(22)

4744(7)

1302(5)

4392(4)

34(1)

C(23)

2678(8)

1918(6)

4125(4)

36(1)

C(24)

2587(7)

2251(5)

2974(4)

28(1)

Table 8.93 Bond lengths [] and angles [] for1-[(1E,3E,5E)-4,6bis(phenylsulfonyl)hexa-1,3,5-trien-1-yl]-4-nitrobenzene.


Bond lengths []
S(1)-O(2)

1.437(3)

S(1)-O(1)

1.440(3)

S(1)-C(19)

1.776(4)

S(1)-C(10)

1.781(4)

S(2)-O(4)

1.427(3)

S(2)-O(3)

1.428(3)

S(2)-C(12)

1.757(4)

S(2)-C(13)

1.766(4)

O(5)-N(1)

1.237(4)

N(1)-O(6)

1.231(5)

268

N(1)-C(1)

1.461(5)

C(1)-C(2)

1.377(5)

C(1)-C(6)

1.379(5)

C(2)-C(3)

1.387(5)

C(3)-C(4)

1.396(5)

C(4)-C(5)

1.398(6)

C(4)-C(7)

1.463(5)

C(5)-C(6)

1.374(6)

C(7)-C(8)

1.344(5)

C(8)-C(9)

1.435(6)

C(9)-C(10)

1.340(5)

C(10)-C(11)

1.457(5)

C(11)-C(12)

1.329(5)

C(13)-C(18)

1.366(6)

C(13)-C(14)

1.398(6)

C(14)-C(15)

1.352(7)

C(15)-C(16)

1.339(9)

C(16)-C(17)

1.391(9)

C(17)-C(18)

1.422(8)

C(19)-C(24)

1.384(5)

C(19)-C(20)

1.389(5)

C(20)-C(21)

1.376(6)

C(21)-C(22)

1.389(6)

C(22)-C(23)

1.379(6)

C(23)-C(24)

1.394(6)

Bond angles []
O(2)-S(1)-O(1)

119.38(16)

O(2)-S(1)-C(19)

108.51(16)

O(1)-S(1)-C(19)

108.52(16)

O(2)-S(1)-C(10)

107.72(17)

O(1)-S(1)-C(10)

107.74(16)

C(19)-S(1)-C(10)

103.90(17)

O(4)-S(2)-O(3)

119.61(18)

O(4)-S(2)-C(12)

109.47(19)

O(3)-S(2)-C(12)

107.45(19)

O(4)-S(2)-C(13)

108.60(19)

O(3)-S(2)-C(13)

108.9(2)

C(12)-S(2)-C(13)

101.31(18)

O(6)-N(1)-O(5)

123.1(4)

O(6)-N(1)-C(1)

118.9(3)

O(5)-N(1)-C(1)

118.0(3)

C(2)-C(1)-C(6)

122.0(4)

C(2)-C(1)-N(1)

119.6(3)

C(6)-C(1)-N(1)

118.4(3)

C(1)-C(2)-C(3)

118.7(3)

C(2)-C(3)-C(4)

120.6(3)

C(3)-C(4)-C(5)

118.8(4)

C(3)-C(4)-C(7)

119.0(4)

C(5)-C(4)-C(7)

122.2(4)

C(6)-C(5)-C(4)

120.8(4)

C(5)-C(6)-C(1)

119.1(3)

C(8)-C(7)-C(4)

126.1(4)

C(7)-C(8)-C(9)

121.3(4)

C(10)-C(9)-C(8)

125.7(4)

C(9)-C(10)-C(11)

124.1(4)

C(9)-C(10)-S(1)

116.8(3)

C(11)-C(10)-S(1)

119.1(3)

C(12)-C(11)-C(10)

126.3(4)

C(11)-C(12)-S(2)

121.2(3)

C(18)-C(13)-C(14)

121.9(4)

C(18)-C(13)-S(2)

119.5(3)

C(14)-C(13)-S(2)

118.6(3)

269

C(15)-C(14)-C(13)

120.6(5)

C(16)-C(15)-C(14)

118.9(6)

C(15)-C(16)-C(17)

122.8(5)

C(16)-C(17)-C(18)

119.0(6)

C(13)-C(18)-C(17)

116.7(5)

C(24)-C(19)-C(20)

121.6(4)

C(24)-C(19)-S(1)

119.7(3)

C(20)-C(19)-S(1)

118.7(3)

C(21)-C(20)-C(19)

118.5(4)

C(20)-C(21)-C(22)

120.6(4)

C(23)-C(22)-C(21)

120.6(4)

C(22)-C(23)-C(24)

119.5(4)

C(19)-C(24)-C(23)

119.1(4)

Table 8.94 Anisotropic displacement parameters (2 x 103) for 1-[(1E,3E,5E)-4,6bis(phenylsulfonyl)hexa-1,3,5-trien-1-yl]-4-nitrobenzene. The anisotropic
displacement factor exponent takes the form: -2 2 [h2 a*2 U11 + ... + 2 h k a* b*
U12].
Atom

U11

U22

U33

U23

U13

U12

S(1)

19(1)

21(1)

21(1)

-3(1)

-6(1)

-1(1)

S(2)

23(1)

22(1)

26(1)

-3(1)

-7(1)

2(1)

O(1)

24(1)

25(1)

28(2)

-2(1)

-10(1)

-3(1)

O(3)

30(2)

41(2)

48(2)

-9(1)

-18(2)

10(1)

O(2)

27(1)

27(1)

25(2)

-5(1)

-4(1)

2(1)

O(4)

38(2)

21(1)

38(2)

1(1)

0(1)

-2(1)

O(5)

35(2)

36(2)

66(3)

6(2)

2(2)

-11(1)

N(1)

40(2)

32(2)

26(2)

2(2)

-7(2)

-10(2)

O(6)

60(2)

22(2)

42(2)

-2(1)

3(2)

-6(1)

C(1)

30(2)

26(2)

18(2)

2(2)

-8(2)

-4(2)

C(2)

24(2)

30(2)

26(2)

0(2)

1(2)

-3(2)

C(3)

26(2)

25(2)

28(2)

1(2)

-3(2)

2(2)

C(4)

24(2)

28(2)

23(2)

-1(2)

-2(2)

-5(2)

C(5)

24(2)

33(2)

32(2)

-8(2)

1(2)

-1(2)

C(6)

30(2)

26(2)

26(2)

-5(2)

-3(2)

1(2)

C(7)

29(2)

30(2)

31(2)

-3(2)

-10(2)

1(2)

C(8)

31(2)

33(2)

25(2)

0(2)

-6(2)

-2(2)

C(9)

23(2)

30(2)

31(2)

0(2)

-6(2)

-2(2)

C(10)

30(2)

25(2)

16(2)

1(2)

-8(2)

-2(2)

C(11)

23(2)

25(2)

25(2)

1(2)

-5(2)

-5(2)

270

C(12)

36(2)

24(2)

23(2)

-1(2)

-9(2)

2(2)

C(13)

29(2)

25(2)

25(2)

-5(2)

-2(2)

6(2)

C(14)

45(3)

38(2)

35(3)

-5(2)

8(2)

0(2)

C(15)

73(4)

55(3)

31(3)

1(2)

7(3)

10(3)

C(16)

84(4)

70(4)

28(3)

13(3)

10(3)

33(4)

C(17)

78(4)

95(5)

57(4)

-36(4)

-40(4)

38(4)

C(18)

40(2)

53(3)

36(3)

-10(2)

-18(2)

6(2)

C(19)

22(2)

19(2)

22(2)

0(2)

-8(2)

-1(1)

C(20)

20(2)

28(2)

28(2)

1(2)

-4(2)

1(2)

C(21)

34(2)

33(2)

37(3)

1(2)

-17(2)

0(2)

C(22)

45(2)

41(2)

19(2)

1(2)

-13(2)

-7(2)

C(23)

39(2)

40(3)

26(2)

1(2)

1(2)

2(2)

C(24)

25(2)

30(2)

27(2)

2(2)

-6(2)

1(2)

Table 8.95 Hydrogen coordinates ( x 104) and isotropic displacement parameters (2


x 103) for 1-[(1E,3E,5E)-4,6-bis(phenylsulfonyl)hexa-1,3,5-trien-1-yl]-4nitrobenzene.
Atom

U(eq)

H(2)

17349

8680

-3001

36

H(3)

15188

6396

-2416

35

H(5)

9622

9302

-997

40

H(6)

11770

11566

-1588

36

H(7)

11616

5147

-1533

38

H(8)

7776

7073

-489

39

H(9)

8450

3628

-569

37

H(11)

4652

6735

942

32

H(12)

890

4790

1342

36

H(14)

-2941

5540

3732

54

H(15)

-3092

4570

5581

74

H(16)

-302

5205

6498

86

H(17)

2621

6921

5659

95

H(18)

2838

7932

3728

54

H(20)

8020

1205

1805

34

271

H(21)

8110

596

3715

43

H(22)

4807

1071

5158

44

H(23)

1355

2111

4710

48

H(24)

1200

2654

2781

36

272

20) 4-(phenylsulfonyl)biphenyl.

Table 8.96 Crystal data and structure refinement for 4-(phenylsulfonyl)biphenyl.


Identification code

phsulf_11

Empirical formula

C18 H14 O2 S

Formula weight

294.35

Temperature

297.0 K

Wavelength

0.7107

Crystal system

Monoclinic

Space group

P21/c

Unit cell dimensions

a = 16.5020(12)
b = 7.8520(5), = 101.480(8)
c = 11.3748(9)

Volume

1444.39(18) 3

Density (calculated)

1.354 Mg/m3

Absorption coefficient

0.225 mm-1

F(000)

616

Crystal size

0.50 x 0.40 x 0.20 mm

273

Theta range for data collection

2.8780 to 28.9560

Index ranges

-15<=h<=8; -10<=k<=8; -22<=l<=22

Reflections collected

6662

Independent reflections

2650 [Rint = 0.0331]

Reflections observed (>2)

1648

Data Completeness

0.999

Absorption correction

Semi-empirical from equivalents

Max. and min. transmission

1.00000 and 0.88718

Refinement method

Full-matrix least-squares on F2

Data / restraints / parameters

2650 / 0 / 190

Goodness-of-fit on F

1.066

Final R indices [I>2(I)]

R1 = 0.0519 wR2 = 0.1115

R indices (all data)

R1 = 0.0970 wR2 = 0.1506

Largest diff. peak and hole

0.251 and -0.353 e.-3

Table 8.97 Atomic coordinates ( x 104) and equivalent isotropic displacement


parameters (2 x 103) for 4-(phenylsulfonyl)biphenyl.U(eq) is defined as one third of
the trace of the orthogonalized Uij tensor.
Atom

U(eq)

S(1)

1796(1)

3433(1)

1702(1)

55(1)

O(2)

1437(2)

1804(3)

1335(2)

77(1)

O(1)

1781(2)

4055(3)

2889(2)

77(1)

C(1)

5966(2)

4237(4)

1851(3)

65(1)

C(2)

1316(2)

6651(4)

1017(3)

56(1)

C(3)

7018(2)

3261(4)

849(3)

59(1)

C(4)

2835(2)

3397(3)

1524(3)

44(1)

C(5)

4224(2)

4363(4)

2102(3)

54(1)

C(6)

1332(2)

4974(4)

662(3)

44(1)

C(7)

6779(2)

4192(4)

1740(3)

74(1)

C(8)

1017(2)

4513(4)

-511(3)

56(1)

C(9)

974(2)

7864(4)

188(4)

72(1)

C(10)

3418(2)

4374(4)

2252(3)

55(1)

C(11)

681(2)

5737(5)

-1328(3)

70(1)

274

C(12)

5613(2)

2430(4)

187(3)

57(1)

C(13)

6429(2)

2392(4)

75(3)

65(1)

C(14)

3872(2)

2422(4)

500(3)

57(1)

C(15)

662(2)

7394(5)

-977(4)

74(1)

C(16)

3065(2)

2414(4)

637(3)

58(1)

C(17)

5356(2)

3354(3)

1079(2)

40(1)

C(18)

4482(2)

3379(3)

1229(2)

38(1)

Table 8.98 Bond lengths [] and angles [] for 4-(phenylsulfonyl)biphenyl.


Bond lengths []
S(1)-O(2)

1.436(2)

S(1)-O(1)

1.441(2)

S(1)-C(6)

1.758(3)

S(1)-C(4)

1.767(3)

C(1)-C(7)

1.372(4)

C(1)-C(17)

1.384(4)

C(2)-C(6)

1.379(4)

C(2)-C(9)

1.379(5)

C(3)-C(13)

1.358(4)

C(3)-C(7)

1.370(4)

C(4)-C(10)

1.372(4)

C(4)-C(16)

1.382(4)

C(5)-C(10)

1.375(4)

C(5)-C(18)

1.390(4)

C(6)-C(8)

1.381(4)

C(8)-C(11)

1.375(4)

C(9)-C(15)

1.373(5)

C(11)-C(15)

1.364(5)

C(12)-C(13)

1.377(4)

C(12)-C(17)

1.382(4)

C(14)-C(16)

1.372(4)

C(14)-C(18)

1.391(4)

C(17)-C(18)

1.484(4)

Bond angles []
O(2)-S(1)-O(1)

119.50(15)

O(2)-S(1)-C(6)

108.56(15)

O(1)-S(1)-C(6)

108.13(14)

O(2)-S(1)-C(4)

107.79(14)

O(1)-S(1)-C(4)

108.11(15)

C(6)-S(1)-C(4)

103.63(12)

C(7)-C(1)-C(17)

122.0(3)

C(6)-C(2)-C(9)

119.2(3)

C(13)-C(3)-C(7)

118.2(3)

C(10)-C(4)-C(16)

119.4(3)

C(10)-C(4)-S(1)

120.1(2)

C(16)-C(4)-S(1)

120.4(2)

C(10)-C(5)-C(18)

122.3(3)

C(2)-C(6)-C(8)

120.5(3)

C(2)-C(6)-S(1)

119.4(3)

C(8)-C(6)-S(1)

120.0(2)

C(3)-C(7)-C(1)

120.8(3)

C(11)-C(8)-C(6)

119.6(3)
275

C(15)-C(9)-C(2)

119.9(3)

C(4)-C(10)-C(5)

120.1(3)

C(15)-C(11)-C(8)

119.9(4)

C(13)-C(12)-C(17)

121.9(3)

C(3)-C(13)-C(12)

121.0(3)

C(16)-C(14)-C(18)

122.6(3)

C(11)-C(15)-C(9)

120.9(4)

C(14)-C(16)-C(4)

119.6(3)

C(12)-C(17)-C(1)

115.9(3)

C(12)-C(17)-C(18)

122.6(3)

C(1)-C(17)-C(18)

121.4(3)

C(5)-C(18)-C(14)

116.0(3)

C(5)-C(18)-C(17)

122.1(3)

C(14)-C(18)-C(17)

121.9(2)

Table 8.99 Anisotropic displacement parameters (2 x 103) for 4(phenylsulfonyl)biphenyl. The anisotropic displacement factor exponent takes the
form: -2 2 [h2 a*2 U11 + ... + 2 h k a* b* U12].
Atom

U11

U22

U33

U23

U13

U12

S(1)

52(1)

57(1)

62(1)

13(1)

22(1)

3(1)

O(2)

60(2)

51(1)

123(2)

16(1)

27(2)

-9(1)

O(1)

75(2)

110(2)

52(2)

15(1)

30(1)

14(1)

C(1)

51(2)

70(2)

74(2)

-28(2)

11(2)

-5(2)

C(2)

56(2)

52(2)

64(2)

-5(2)

20(2)

3(2)

C(3)

46(2)

62(2)

71(2)

12(2)

20(2)

-1(2)

C(4)

49(2)

41(2)

44(2)

8(1)

12(1)

5(1)

C(5)

52(2)

58(2)

52(2)

-16(2)

8(2)

-6(2)

C(6)

36(2)

45(2)

54(2)

3(1)

16(1)

0(1)

C(7)

54(2)

76(2)

90(3)

-18(2)

7(2)

-13(2)

C(8)

49(2)

58(2)

62(2)

-3(2)

13(2)

-10(2)

C(9)

69(3)

47(2)

105(3)

3(2)

31(2)

8(2)

C(10)

58(2)

58(2)

50(2)

-13(2)

14(2)

4(2)

C(11)

48(2)

93(3)

63(2)

10(2)

-1(2)

-10(2)

C(12)

52(2)

70(2)

51(2)

-14(2)

12(2)

-3(2)

C(13)

59(2)

80(2)

60(2)

-10(2)

22(2)

3(2)

C(14)

52(2)

67(2)

53(2)

-21(2)

13(2)

-1(2)

C(15)

49(2)

81(3)

92(3)

31(2)

18(2)

12(2)

C(16)

49(2)

63(2)

63(2)

-18(2)

9(2)

-7(2)

C(17)

47(2)

34(2)

38(2)

6(1)

6(1)

1(1)

C(18)

44(2)

35(1)

34(2)

4(1)

4(1)

4(1)

276

Table 8.100 Hydrogen coordinates ( x 104) and isotropic displacement parameters


(2 x 103) for 4-(phenylsulfonyl)biphenyl.
Atom

U(eq)

H(1)

5821

4880

2464

84

H(2)

1533

6960

1806

73

H(3)

7569

3225

776

76

H(5)

4610

5037

2602

70

H(7)

7172

4801

2276

96

H(8)

1032

3381

-747

73

H(9)

956

8998

418

93

H(10)

3268

5044

2848

71

H(11)

466

5434

-2120

91

H(12)

5225

1816

-353

75

H(13)

6579

1762

-540

85

H(14)

4017

1760

-104

74

H(15)

435

8218

-1533

96

H(16)

2674

1750

136

76

277

21) 4-methoxybiphen-4-yl phenyl sulphone.

Table 8.101 Crystal data and structure refinement for 4-methoxybiphen-4-yl phenyl
sulphone.
Identification code

phsulf_22

Empirical formula

C19 H16 O3 S

Formula weight

324.38

Temperature

296.3 K

Wavelength

0.7107

Crystal system

Monoclinic

Space group

P21

Unit cell dimensions

a = 6.7378(3)
b = 7.9901(4), = 98.700(5)
c = 15.1328(7)

Volume

805.31(7) 3

Density (calculated)

1.338 Mg/m3

Absorption coefficient

0.213 mm-1

F(000)

340

Crystal size

0.40 x 0.30 x 0.25 mm

Theta range for data collection

3.0523 to 28.9594

Index ranges

-8<=h<=9; -7<=k<=10; -20<=l<=15

278

Reflections collected

3681

Independent reflections

2209 [Rint = 0.0255]

Reflections observed (>2)

1914

Data Completeness

0.998

Absorption correction

Semi-empirical from equivalents

Max. and min. transmission

1.00000 and 0.88553

Refinement method

Full-matrix least-squares on F2

Data / restraints / parameters

2209 / 1 / 209

Goodness-of-fit on F2

1.055

Final R indices [I>2(I)]

R1 = 0.0384 wR2 = 0.0854

R indices (all data)

R1 = 0.0482 wR2 = 0.0909

Absolute structure parameter

0.09(10)

Largest diff. peak and hole

0.121 and -0.238 e.-3

Table 8.102 Atomic coordinates ( x 104) and equivalent isotropic displacement


parameters (2 x 103) for 4-methoxybiphen-4-yl phenyl sulphone.U(eq) is defined
as one third of the trace of the orthogonalized Uij tensor.
Atom

U(eq)

S(1)

3306(1)

6276(1)

8194(1)

51(1)

O(3)

-7038(3)

5910(3)

2516(1)

63(1)

O(1)

5232(3)

6173(5)

7916(1)

78(1)

O(2)

2783(4)

7717(3)

8680(2)

73(1)

C(1)

-8817(5)

6888(6)

2420(3)

92(2)

C(2)

-5735(3)

6031(4)

3287(2)

45(1)

C(3)

-3971(4)

5107(4)

3334(2)

57(1)

C(4)

-2576(4)

5127(4)

4082(2)

50(1)

C(5)

-2827(3)

6058(4)

4835(2)

39(1)

C(6)

-4575(4)

6991(4)

4769(2)

58(1)

C(7)

-6016(4)

6977(4)

4017(2)

58(1)

C(8)

-1323(3)

6067(4)

5663(2)

40(1)

C(9)

582(4)

5386(5)

5687(2)

57(1)

C(10)

1968(4)

5410(4)

6455(2)

59(1)

C(11)

1486(3)

6135(5)

7221(2)

46(1)

279

C(12)

-381(4)

6803(4)

7218(2)

54(1)

C(13)

-1765(4)

6759(4)

6453(2)

54(1)

C(14)

3001(4)

4485(4)

8839(2)

41(1)

C(15)

3875(5)

3007(4)

8648(2)

61(1)

C(16)

3683(6)

1625(5)

9156(3)

82(1)

C(17)

2663(6)

1718(6)

9851(3)

88(1)

C(18)

1789(6)

3191(7)

10055(3)

87(1)

C(19)

1956(4)

4602(5)

9549(2)

59(1)

Table 8.103 Bond lengths [] and angles [] for 4-methoxybiphen-4-yl phenyl


sulphone.
Bond lengths []
S(1)-O(1)

1.4256(19)

S(1)-O(2)

1.438(2)

S(1)-C(14)

1.761(3)

S(1)-C(11)

1.772(3)

O(3)-C(2)

1.353(3)

O(3)-C(1)

1.420(4)

C(2)-C(7)

1.375(4)

C(2)-C(3)

1.392(4)

C(3)-C(4)

1.358(4)

C(4)-C(5)

1.393(4)

C(5)-C(6)

1.384(4)

C(5)-C(8)

1.487(3)

C(6)-C(7)

1.380(4)

C(8)-C(9)

1.390(4)

C(8)-C(13)

1.391(4)

C(9)-C(10)

1.376(4)

C(10)-C(11)

1.378(4)

C(11)-C(12)

1.366(4)

C(12)-C(13)

1.372(4)

C(14)-C(15)

1.370(4)

C(14)-C(19)

1.374(4)

C(15)-C(16)

1.362(5)

C(16)-C(17)

1.344(6)

C(17)-C(18)

1.372(6)

C(18)-C(19)

1.377(5)

Bond angles []
O(1)-S(1)-O(2)

120.11(18)

O(1)-S(1)-C(14)

107.69(17)

O(2)-S(1)-C(14)

108.03(12)

O(1)-S(1)-C(11)

107.30(11)

O(2)-S(1)-C(11)

106.45(17)

C(14)-S(1)-C(11)

106.52(15)

C(2)-O(3)-C(1)

118.5(3)

O(3)-C(2)-C(7)

125.6(3)

O(3)-C(2)-C(3)

116.4(3)

C(7)-C(2)-C(3)

118.1(3)

C(4)-C(3)-C(2)

121.0(3)

C(3)-C(4)-C(5)

122.3(3)
280

C(6)-C(5)-C(4)

115.8(2)

C(6)-C(5)-C(8)

121.5(2)

C(4)-C(5)-C(8)

122.7(2)

C(7)-C(6)-C(5)

122.7(3)

C(2)-C(7)-C(6)

120.1(3)

C(9)-C(8)-C(13)

116.7(2)

C(9)-C(8)-C(5)

122.0(2)

C(13)-C(8)-C(5)

121.3(2)

C(10)-C(9)-C(8)

121.5(3)

C(9)-C(10)-C(11)

120.0(3)

C(12)-C(11)-C(10)

119.7(3)

C(12)-C(11)-S(1)

120.0(2)

C(10)-C(11)-S(1)

120.3(2)

C(11)-C(12)-C(13)

120.1(2)

C(12)-C(13)-C(8)

121.9(2)

C(15)-C(14)-C(19)

120.7(3)

C(15)-C(14)-S(1)

119.6(2)

C(19)-C(14)-S(1)

119.6(2)

C(16)-C(15)-C(14)

120.0(3)

C(17)-C(16)-C(15)

120.1(4)

C(16)-C(17)-C(18)

120.7(4)

C(17)-C(18)-C(19)

120.2(3)

C(14)-C(19)-C(18)

118.3(3)

Table 8.104 Anisotropic displacement parameters (2 x 103) for 4-methoxybiphen4-yl phenyl sulphone. The anisotropic displacement factor exponent takes the form: 2 2 [h2 a*2 U11 + ... + 2 h k a* b* U12].
Atom

U11

U22

U33

U23

U13

U12

S(1)

54(1)

53(1)

46(1)

4(1)

5(1)

-14(1)

O(3)

56(1)

72(2)

57(1)

1(1)

-5(1)

4(1)

O(1)

50(1)

121(2)

63(1)

17(2)

8(1)

-29(2)

O(2)

108(2)

39(1)

66(2)

-7(1)

-7(1)

-8(1)

C(1)

60(2)

123(4)

85(3)

1(3)

-8(2)

21(2)

C(2)

45(1)

42(2)

48(1)

8(2)

8(1)

-3(2)

C(3)

68(2)

54(2)

49(2)

-11(2)

10(2)

16(2)

C(4)

50(2)

49(2)

51(2)

-2(2)

7(1)

16(1)

C(5)

44(1)

33(2)

42(1)

4(1)

14(1)

2(1)

C(6)

55(2)

69(2)

51(2)

-8(2)

13(1)

17(2)

C(7)

43(2)

71(2)

62(2)

-2(2)

9(1)

18(2)

C(8)

41(1)

36(2)

45(1)

1(2)

12(1)

0(2)

C(9)

51(2)

75(2)

47(2)

-11(2)

13(1)

11(2)

C(10)

45(2)

80(2)

54(2)

-4(2)

8(1)

15(2)

C(11)

50(1)

46(2)

42(1)

5(2)

10(1)

-8(2)

C(12)

59(2)

63(2)

43(2)

-4(2)

17(1)

8(2)
281

C(13)

49(2)

68(3)

46(2)

-3(2)

16(1)

10(2)

C(14)

38(1)

42(2)

41(2)

-2(1)

1(1)

-3(1)

C(15)

59(2)

55(2)

67(2)

-10(2)

4(2)

1(2)

C(16)

76(2)

49(3)

110(3)

-3(3)

-23(2)

6(2)

C(17)

79(2)

74(4)

97(3)

43(3)

-30(2)

-23(2)

C(18)

91(3)

108(4)

66(2)

24(3)

25(2)

-20(3)

C(19)

63(2)

63(2)

56(2)

6(2)

22(2)

2(2)

Table 8.105 Hydrogen coordinates ( x 104) and isotropic displacement parameters


(2 x 103) for 4-methoxybiphen-4-yl phenyl sulphone.
Atom

U(eq)

H(1A)

-9559

6631

2896

119

H(1B)

-9624

6640

1856

119

H(1C)

-8470

8054

2442

119

H(3)

-3745

4466

2846

74

H(4)

-1412

4496

4092

65

H(6)

-4786

7654

5251

75

H(7)

-7179

7610

4004

76

H(9)

929

4903

5173

74

H(10)

3230

4937

6457

77

H(12)

-714

7288

7734

70

H(13)

-3035

7206

6464

70

H(15)

4599

2946

8173

79

H(16)

4259

617

9021

107

H(17)

2548

773

10199

114

H(18)

1081

3237

10537

113

H(19)

1376

5608

9684

77

282

22) 4-nitrobiphen-4-yl phenyl sulphone.

Table 8.106 Crystal data and structure refinement for 4-nitrobiphen-4-yl phenyl
sulphone.
Identification code

phsulf_33

Empirical formula

C18 H13 N O4 S

Formula weight

339.35

Temperature

149.9 K

Wavelength

0.7107

Crystal system

Monoclinic

Space group

P21/c

Unit cell dimensions

a = 13.1110(9)
b = 7.6752(5), = 99.600(7)
c = 15.2536(13)

Volume

1513.47(19) 3

Density (calculated)

1.489 Mg/m3

Absorption coefficient

0.237 mm-1

F(000)

704

283

Crystal size

0.30 x 0.30 x 0.25 mm

Theta range for data collection

2.90 to 28.9327

Index ranges

-15<=h<=12; -9<=k<=6; -18<=l<=15

Reflections collected

6953

Independent reflections

2766 [Rint = 0.0445]

Reflections observed (>2)

1772

Data Completeness

0.999

Absorption correction

Semi-empirical from equivalents

Max. and min. transmission

1.00000 and 0.89631

Refinement method

Full-matrix least-squares on F2

Data / restraints / parameters

2766 / 0 / 217

Goodness-of-fit on F2

0.998

Final R indices [I>2(I)]

R1 = 0.0541 wR2 = 0.0870

R indices (all data)

R1 = 0.1014 wR2 = 0.1021

Largest diff. peak and hole

0.237 and -0.375 e.-3

Table 8.107 Atomic coordinates ( x 104) and equivalent isotropic displacement


parameters (2 x 103) for 4-nitrobiphen-4-yl phenyl sulphone.U(eq) is defined as
one third of the trace of the orthogonalized Uij tensor.
Atom

U(eq)

S(1)

7046(1)

6567(1)

827(1)

30(1)

O(1)

7553(2)

5780(3)

152(1)

37(1)

O(2)

6629(2)

8302(2)

698(1)

36(1)

N(1)

12403(2)

7051(3)

6580(2)

34(1)

O(3)

12215(2)

8002(3)

7186(2)

41(1)

O(4)

13203(2)

6202(3)

6627(2)

50(1)

C(1)

11637(2)

6940(3)

5765(2)

24(1)

C(2)

10685(2)

7722(3)

5746(2)

28(1)

C(3)

9964(2)

7620(3)

4980(2)

27(1)

C(4)

10182(2)

6779(3)

4224(2)

23(1)

C(5)

11161(2)

6007(3)

4278(2)

27(1)

C(6)

11879(2)

6062(3)

5047(2)

28(1)

C(7)

9408(2)

6704(3)

3396(2)

22(1)

284

C(8)

8571(2)

7867(3)

3244(2)

28(1)

C(9)

7863(2)

7833(3)

2472(2)

28(1)

C(10)

7951(2)

6603(4)

1824(2)

25(1)

C(11)

8763(2)

5416(4)

1958(2)

29(1)

C(12)

9478(2)

5483(3)

2731(2)

28(1)

C(13)

6057(2)

5167(3)

1045(2)

24(1)

C(14)

5242(2)

5830(4)

1410(2)

30(1)

C(15)

4492(2)

4708(4)

1602(2)

38(1)

C(16)

4553(2)

2948(4)

1428(2)

35(1)

C(17)

5367(3)

2294(4)

1072(2)

38(1)

C(18)

6130(2)

3398(4)

880(2)

36(1)

Table 8.108 Bond lengths [] and angles [] for 4-nitrobiphen-4-yl phenyl sulphone.
Bond lengths []
S(1)-O(2)

1.4399(19)

S(1)-O(1)

1.447(2)

S(1)-C(13)

1.758(3)

S(1)-C(10)

1.766(3)

N(1)-O(4)

1.227(3)

N(1)-O(3)

1.234(3)

N(1)-C(1)

1.465(4)

C(1)-C(6)

1.368(4)

C(1)-C(2)

1.380(4)

C(2)-C(3)

1.378(4)

C(3)-C(4)

1.392(4)

C(4)-C(5)

1.404(4)

C(4)-C(7)

1.483(4)

C(5)-C(6)

1.377(4)

C(7)-C(12)

1.395(4)

C(7)-C(8)

1.403(4)

C(8)-C(9)

1.373(4)

C(9)-C(10)

1.386(4)

C(10)-C(11)

1.391(4)

C(11)-C(12)

1.380(4)

C(13)-C(14)

1.381(4)

C(13)-C(18)

1.387(4)

C(14)-C(15)

1.376(4)

C(15)-C(16)

1.381(4)

C(16)-C(17)

1.371(4)

C(17)-C(18)

1.379(4)

Bond angles []
O(2)-S(1)-O(1)

119.89(13)

O(2)-S(1)-C(13)

108.40(13)

O(1)-S(1)-C(13)

108.66(13)

O(2)-S(1)-C(10)

106.75(13)

O(1)-S(1)-C(10)

107.27(13)

C(13)-S(1)-C(10)

104.88(13)

O(4)-N(1)-O(3)

123.1(3)

O(4)-N(1)-C(1)

118.5(3)

285

O(3)-N(1)-C(1)

118.4(3)

C(6)-C(1)-C(2)

121.8(3)

C(6)-C(1)-N(1)

119.4(3)

C(2)-C(1)-N(1)

118.8(3)

C(3)-C(2)-C(1)

118.9(3)

C(2)-C(3)-C(4)

121.5(3)

C(3)-C(4)-C(5)

117.3(3)

C(3)-C(4)-C(7)

121.1(3)

C(5)-C(4)-C(7)

121.5(3)

C(6)-C(5)-C(4)

121.7(3)

C(1)-C(6)-C(5)

118.7(3)

C(12)-C(7)-C(8)

116.9(3)

C(12)-C(7)-C(4)

121.7(3)

C(8)-C(7)-C(4)

121.4(3)

C(9)-C(8)-C(7)

121.9(3)

C(8)-C(9)-C(10)

120.0(3)

C(9)-C(10)-C(11)

119.6(3)

C(9)-C(10)-S(1)

120.1(2)

C(11)-C(10)-S(1)

120.3(2)

C(12)-C(11)-C(10)

119.8(3)

C(11)-C(12)-C(7)

121.9(3)

C(14)-C(13)-C(18)

121.0(3)

C(14)-C(13)-S(1)

119.7(2)

C(18)-C(13)-S(1)

119.3(2)

C(15)-C(14)-C(13)

118.9(3)

C(14)-C(15)-C(16)

120.3(3)

C(17)-C(16)-C(15)

120.6(3)

C(16)-C(17)-C(18)

119.9(3)

C(17)-C(18)-C(13)

119.2(3)

Table 8.109 Anisotropic displacement parameters (2 x 103) for 4-nitrobiphen-4-yl


phenyl sulphone. The anisotropic displacement factor exponent takes the form: -2 2
[h2 a*2 U11 + ... + 2 h k a* b* U12].
Atom

U11

U22

U33

U23

U13

U12

S(1)

26(1)

33(1)

33(1)

1(1)

11(1)

-5(1)

O(1)

29(1)

55(1)

31(1)

-5(1)

16(1)

-7(1)

O(2)

34(1)

30(1)

45(2)

9(1)

9(1)

-3(1)

N(1)

30(2)

27(2)

45(2)

0(1)

4(2)

-4(1)

O(3)

44(2)

36(1)

42(2)

-10(1)

4(1)

1(1)

O(4)

34(1)

48(2)

65(2)

-9(1)

-4(1)

15(1)

C(1)

26(2)

15(2)

33(2)

2(1)

5(2)

-6(1)

C(2)

31(2)

21(2)

37(2)

-2(2)

16(2)

-1(1)

C(3)

26(2)

22(2)

36(2)

2(2)

14(2)

2(1)

C(4)

24(2)

14(1)

32(2)

2(1)

11(2)

-2(1)

C(5)

32(2)

18(2)

36(2)

-1(1)

17(2)

-1(1)

C(6)

28(2)

19(2)

39(2)

2(2)

12(2)

0(1)

C(7)

26(2)

16(1)

30(2)

4(1)

17(1)

-3(1)

286

C(8)

26(2)

23(2)

36(2)

-4(1)

12(2)

-2(1)

C(9)

24(2)

22(2)

39(2)

0(2)

11(2)

2(1)

C(10)

22(2)

25(2)

31(2)

-1(2)

12(1)

-7(1)

C(11)

32(2)

23(2)

36(2)

-2(2)

16(2)

-1(1)

C(12)

27(2)

22(2)

37(2)

3(2)

12(2)

4(1)

C(13)

21(2)

25(2)

26(2)

3(1)

4(1)

-4(1)

C(14)

29(2)

25(2)

37(2)

1(2)

9(2)

1(1)

C(15)

30(2)

39(2)

49(2)

5(2)

20(2)

1(2)

C(16)

32(2)

33(2)

42(2)

7(2)

8(2)

-8(1)

C(17)

40(2)

24(2)

51(3)

-7(2)

10(2)

-4(1)

C(18)

30(2)

33(2)

48(2)

-4(2)

15(2)

3(2)

Table 8.110 Hydrogen coordinates ( x 104) and isotropic displacement parameters


(2 x 103) for 4-nitrobiphen-4-yl phenyl sulphone.
Atom

U(eq)

H(2)

10534

8308

6242

37

H(3)

9317

8125

4967

35

H(5)

11328

5443

3781

36

H(6)

12517

5515

5077

36

H(8)

8495

8683

3679

36

H(9)

7324

8636

2384

37

H(11)

8824

4581

1528

38

H(12)

10023

4692

2811

36

H(14)

5202

7016

1523

39

H(15)

3941

5136

1850

49

H(16)

4038

2201

1554

46

H(17)

5405

1106

960

50

H(18)

6687

2961

643

47

287

23) 1,4-naphthaquinone.

Table 8.111 Crystal data and structure refinement for 1,4-naphthaquinone.


Identification code

14naph

Empirical formula

C10 H6 O2

Formula weight

158.15

Temperature

150.0 K

Wavelength

0.7107

Crystal system

Monoclinic

Space group

P21/c

Unit cell dimensions

a = 8.1933(3)
b = 7.7393(3), = 94.486(3)
c = 11.4405(4)

Volume

723.23(4) 3

Density (calculated)

1.452 Mg/m3

Absorption coefficient

0.102 mm-1

F(000)

328

Crystal size

0.30 x 0.20 x 0.20 mm

Theta range for data collection

3.1727 to 29.0378

Index ranges

-8<=h<=10; -7<=k<=10; -11<=l<=14

Reflections collected

3141

Independent reflections

1320 [Rint = 0.0120]


288

Reflections observed (>2)

1184

Data Completeness

0.996

Absorption correction

Semi-empirical from equivalents

Max. and min. transmission

1.00000 and 0.97291

Refinement method

Full-matrix least-squares on F2

Data / restraints / parameters

1320 / 0 / 109

Goodness-of-fit on F2

1.054

Final R indices [I>2(I)]

R1 = 0.0306 wR2 = 0.0834

R indices (all data)

R1 = 0.0347 wR2 = 0.0859

Largest diff. peak and hole

0.192 and -0.164 e.-3

Table 8.112 Atomic coordinates ( x 104) and equivalent isotropic displacement


parameters (2 x 103) for 1,4-naphthaquinone.U(eq) is defined as one third of the
trace of the orthogonalized Uij tensor.
Atom

U(eq)

O(1)

371(1)

2190(1)

8840(1)

31(1)

O(2)

4346(1)

4615(1)

12387(1)

29(1)

C(1)

1275(1)

2785(1)

9640(1)

21(1)

C(2)

1782(1)

1727(1)

10677(1)

23(1)

C(3)

2821(1)

2314(2)

11539(1)

23(1)

C(4)

3464(1)

4092(1)

11550(1)

20(1)

C(5)

2990(1)

5211(1)

10523(1)

18(1)

C(6)

3605(1)

6885(2)

10470(1)

22(1)

C(7)

3190(1)

7904(2)

9498(1)

24(1)

C(8)

2130(1)

7285(2)

8587(1)

25(1)

C(9)

1493(1)

5635(1)

8638(1)

22(1)

C(10)

1930(1)

4578(1)

9598(1)

18(1)

Table 8.113 Bond lengths [] and angles [] for 1,4-naphthaquinone.


Bond lengths []
O(1)-C(1)

1.2217(13)

O(2)-C(4)

1.2226(13)

C(1)-C(2)

1.4742(16)

C(1)-C(10)

1.4900(15)

C(2)-C(3)

1.3320(16)

C(3)-C(4)

1.4732(16)
289

C(4)-C(5)

1.4863(15)

C(5)-C(6)

1.3928(16)

C(5)-C(10)

1.4041(15

C(6)-C(7)

1.3844(16)

C(7)-C(8)

1.3881(17)

C(8)-C(9)

1.3824(16)

C(9)-C(10)

1.3935(15)

Bond angles []
O(1)-C(1)-C(2)

120.63(10)

O(1)-C(1)-C(10)

121.71(10)

C(2)-C(1)-C(10)

117.65(9)

C(3)-C(2)-C(1)

121.99(10)

C(2)-C(3)-C(4)

122.17(10)

O(2)-C(4)-C(3)

120.30(10)

O(2)-C(4)-C(5)

121.86(10)

C(3)-C(4)-C(5)

117.83(9)

C(6)-C(5)-C(10)

119.77(10)

C(6)-C(5)-C(4)

120.21(10)

C(10)-C(5)-C(4)

120.02(10)

C(7)-C(6)-C(5)

119.86(10)

C(6)-C(7)-C(8)

120.41(10)

C(9)-C(8)-C(7)

120.24(10)

C(8)-C(9)-C(10)

120.05(10)

C(9)-C(10)-C(5)

119.65(10)

C(9)-C(10)-C(1)

120.09(10)

C(5)-C(10)-C(1)

120.26(10)

Table 8.114 Anisotropic displacement parameters (2 x 103) for 1,4-naphthaquinone.


The anisotropic displacement factor exponent takes the form: -2 2 [h2 a*2 U11 + ... +
2 h k a* b* U12].
Atom

U11

U22

U33

U23

U13

U12

O(1)

35(1)

30(1)

26(1)

-4(1)

-6(1)

-9(1)

O(2)

32(1)

28(1)

25(1)

-4(1)

-10(1)

2(1)

C(1)

18(1)

24(1)

20(1)

-4(1)

2(1)

-1(1)

C(2)

23(1)

18(1)

28(1)

0(1)

4(1)

-1(1)

C(3)

22(1)

22(1)

24(1)

4(1)

1(1)

4(1)

C(4)

17(1)

22(1)

20(1)

-3(1)

1(1)

4(1)

C(5)

16(1)

20(1)

19(1)

-2(1)

2(1)

3(1)

C(6)

19(1)

22(1)

24(1)

-6(1)

1(1)

0(1)

C(7)

24(1)

18(1)

31(1)

0(1)

7(1)

0(1)

C(8)

26(1)

26(1)

23(1)

5(1)

6(1)

5(1)

C(9)

20(1)

26(1)

18(1)

-2(1)

1(1)

2(1)

C(10)

16(1)

20(1)

19(1)

-3(1)

3(1)

2(1)

290

Table 8.115 Hydrogen coordinates ( x 104) and isotropic displacement parameters


(2 x 103) for 1,4-naphthaquinone.
Atom

U(eq)

H(2)

1363

615

10730

30

H(3)

3151

1578

12155

30

H(6)

4294

7316

11086

29

H(7)

3623

9011

9454

32

H(8)

1848

7982

7941

32

H(9)

772

5230

8031

28

291

Bibliography

292

1.
2.

3.
4.
5.
6.

7.
8.
9.

10.
11.
12.
13.
14.

15.

16.
17.

18.

19.

Vippagunta, S.R., H.G. Brittain, and D.J.W. Grant, Crystalline solids.


Advanced Drug Delivery Reviews, 2001. 48(1): p. 3-26.
Sarma, B., et al., Solid forms of pharmaceuticals: Polymorphs, salts and
cocrystals. Korean Journal of Chemical Engineering, 2011. 28(2): p. 315322.
Shan, N. and M.J. Zaworotko, The role of cocrystals in pharmaceutical
science. Drug Discovery Today, 2008. 13(9-10): p. 440-446.
Brittain, H.G., Polymorphism in pharmaceutical solids. 2009, p.280-282:
Informa Healthcare.
McCrone, W., Physics and chemistry of the organic solid state. 1965: Wiley
Interscience: New York. p. 725-767.
Rubin-Preminger, J.M. and J. Bernstein, 3-Aminobenzenesulfonic Acid: A
Disappearing Polymorph. Crystal Growth & Design, 2005. 5(4): p. 13431349.
Bauer, J., et al., Ritonavir: An Extraordinary Example of Conformational
Polymorphism. Pharmaceutical Research, 2001. 18(6): p. 859-866.
Pandit, N.K., Introduction to the Pharmaceutical Sciences. 2006, p.31:
Lippincott Williams & Wilkins.
Lancaster, R.W., L.D. Harris, and D. Pearson, Fifty-year old samples of
progesterone demonstrate the complex role of synthetic impurities in
stabilizing a metastable polymorph. CrystEngComm, 2011. 13(6): p. 17751777.
Leicester, H.M. and H.S. Klickstein, A Source Book in Chemistry, 14001900. 1969, p.306-308: Harvard University Press.
Vishweshwar, P., et al., Pharmaceutical co-crystals. Journal of
Pharmaceutical Sciences, 2006. 95(3): p. 499-516.
Haleblian, J. and W. McCrone, Pharmaceutical applications of
polymorphism. Journal of Pharmaceutical Sciences, 1969. 58(8): p. 911-929.
Hilfiker, R., Polymorphism: in the Pharmaceutical Industry. 2006, p. 21:
John Wiley & Sons.
Perrin, M. and P. Michel, Polymorphisme du p-chlorophenol. II. Structure
cristalline a basse temperature de la forme metastable (forme [beta]). Acta
Crystallographica Section B, 1973. 29(2): p. 258-263.
Kulkarni, G.U., P. Kumaradhas, and C.N.R. Rao, Charge Density Study of the
Polymorphs of p-Nitrophenol. Chemistry of Materials, 1998. 10(11): p. 34983505.
Singh, D., et al., Solid-state characterization of chlordiazepoxide
polymorphs. Journal of Pharmaceutical Sciences, 1998. 87(5): p. 655-662.
Graeber, E.J. and B. Morosin, The crystal structures of 2,2',4,4',6,6'hexanitroazobenzene (HNAB), forms I and II. Acta Crystallographica Section
B, 1974. 30(2): p. 310-317.
Prusiner, P. and M. Sundaralingam, The crystal and molecular structures of
two polymorphic crystalline forms of virazole (1-[beta]-d-ribofuranosyl1,2,4-triazole-3-carboxamide). A new synthetic broad sprectrum antiviral
agent. Acta Crystallographica Section B, 1976. 32(2): p. 419-426.
Dey, S.K. and G. Das, Conformational Polymorphism of a Simple Tripodal
Podand Bearing Nitro Functionality. Crystal Growth & Design, 2009. 10(2):
p. 754-760.
293

20.
21.
22.
23.

24.

25.

26.

27.

28.
29.
30.
31.
32.
33.

34.
35.

36.

37.
38.

Byrn, S.R., R.R. Pfeiffer, and J.G. Stowell, Solid-state chemistry of drugs.
1999, p.149: SSCI, Inc.
Hilfiker, R., Polymorphism: in the Pharmaceutical Industry. 2006, p. 22:
John Wiley & Sons.
Hilfiker, R., Polymorphism: in the Pharmaceutical Industry. 2006, p. 24-34:
John Wiley & Sons.
Herbstein, F.H., Diversity Amidst Similarity: A Multidisciplinary Approach to
Phase Relationships, Solvates, and Polymorphs. Crystal Growth & Design,
2004. 4(6): p. 1419-1429.
Suitchmezian, V., et al., Structural, Thermodynamic, and Kinetic Aspects of
the Polymorphism and Pseudopolymorphism of Prednisolone (11,17,21Trihydroxy-1,4-pregnadien-3,20-dion). Crystal Growth & Design, 2008. 8(1):
p. 98-107.
Barbas, R., et al., Polymorphism of Norfloxacin: Evidence of the
Enantiotropic Relationship between Polymorphs A and B. Crystal Growth &
Design, 2006. 6(6): p. 1463-1467.
Yu, L., Polymorphism in Molecular Solids: An Extraordinary System of Red,
Orange, and Yellow Crystals. Accounts of Chemical Research, 2010. 43(9):
p. 1257-1266.
Chen, S., I.A. Guzei, and L. Yu, New Polymorphs of ROY and New Record
for Coexisting Polymorphs of Solved Structures. Journal of the American
Chemical Society, 2005. 127(27): p. 9881-9885.
Hilfiker, R., Polymorphism: in the Pharmaceutical Industry. 2006, p. 289290: John Wiley & Sons.
Kahlweit, M., Ostwald ripening of precipitates. Advances in Colloid and
Interface Science, 1975. 5(1): p. 1-35.
Van Der Sluis, P. and J. Kroon, Solvents and x-ray crystallography. Journal
of Crystal Growth, 1989. 97(3-4): p. 645-656.
Brittain, H.G., Polymorphism and solvatomorphism 2010. Journal of
Pharmaceutical Sciences, 2012. 101(2): p. 464-484.
Hosokawa, T., et al., Isostructurality among Five Solvates of Phenylbutazone.
Crystal Growth & Design, 2004. 4(6): p. 1195-1201.
Stephenson, G.A., et al., Solid-State Analysis of Polymorphic, Isomorphic,
and Solvated Forms of Dirithromycin. Journal of the American Chemical
Society, 1994. 116(13): p. 5766-5773.
Caira, M.R., G. Bettinetti, and M. Sorrenti, J. Pharm. Sci., 2002. 91: p. 467.
Kawashima, Y., et al., Characterization of polymorphs of tranilast anhydrate
and tranilast monohydrate when crystallized by two solvent change spherical
crystallization techniques. Journal of Pharmaceutical Sciences, 1991. 80(5):
p. 472-478.
Shefter, E. and T. Higuchi, Dissolution behavior of crystalline solvated and
nonsolvated forms of some pharmaceuticals. Journal of Pharmaceutical
Sciences, 1963. 52(8): p. 781-791.
Giron, D., Thermal analysis and calorimetric methods in the characterisation
of polymorphs and solvates. Thermochimica Acta, 1995. 248(0): p. 1-59.
Suzuki, M. and K. Kobayashi, Polymorphism in Solvate Crystals of
Indantrione 1,2-Dioxime. Crystal Growth & Design, 2011. 11(5): p. 18141820.

294

39.

40.
41.
42.
43.

44.
45.

46.

47.
48.
49.
50.

51.
52.
53.
54.
55.
56.
57.
58.
59.
60.
61.

Gorbitz, C.H. and H.-P. Hersleth, On the inclusion of solvent molecules in the
crystal structures of organic compounds. Acta Crystallographica Section B,
2000. 56(3): p. 526-534.
Brittain, H.G., Polymorphism in pharmaceutical solids. 2009, p.126-130:
Informa Healthcare.
Byrn, S., et al., Pharmaceutical Solids: A Strategic Approach to Regulatory
Considerations. Pharmaceutical Research, 1995. 12(7): p. 945-954.
Rocco, W.L., C. Morphet, and S.M. Laughlin, Solid-state characterization of
zanoterone. International Journal of Pharmaceutics, 1995. 122(1-2): p. 17-25.
Schmidt, A., V. Niederwanger, and U. Griesser, Solid-state forms of
prilocaine hydrochloride. Journal of Thermal Analysis and Calorimetry,
2004. 77(2): p. 639-652.
Hilfiker, R., Polymorphism: in the Pharmaceutical Industry. 2006, p. 228229: John Wiley & Sons.
Allen, F., The Cambridge Structural Database: a quarter of a million crystal
structures and rising. Acta Crystallographica Section B, 2002. 58(3 Part 1):
p. 380-388.
Nangia, A. and G. R. Desiraju, Pseudopolymorphism: occurrences of
hydrogen bonding organic solvents in molecular crystals. Chemical
Communications, 1999(7): p. 605-606.
Hilfiker, R., Polymorphism: in the Pharmaceutical Industry. 2006, p. 219222: John Wiley & Sons.
Jeffrey, G.A., Water structure in organic hydrates. Accounts of Chemical
Research, 1969. 2(11): p. 344-352.
Hilfiker, R., Polymorphism: in the Pharmaceutical Industry. 2006, p. 218219: John Wiley & Sons.
Petit, S. and G. Coquerel, Mechanism of Several Solid-Solid Transformations
between Dihydrated and Anhydrous Copper(II) 8-Hydroxyquinolinates.
Proposition for a Unified Model for the Dehydration of Molecular Crystals.
Chemistry of Materials, 1996. 8(9): p. 2247-2258.
Vekilov, P.G., Nucleation. Crystal Growth & Design, 2010. 10(12): p. 50075019.
Mullin, J.W., Crystallization. 1997, p. 136-151: Butterworth-Heinemann.
Davey, R.J. and J. Garside, From Molecules to Crystallizers. 2001, p. 29-32:
Oxford University Press, USA.
Threlfall, T., Structural and Thermodynamic Explanations of Ostwald's Rule.
Organic Process Research & Development, 2003. 7(6): p. 1017-1027.
Dureisseix, V., et al., Two Concomitant Polymorphs of 1,2-Naphthoquinone2-semicarbazone. Crystal Growth & Design, 2009. 9(8): p. 3438-3443.
Bonzel, H.P., 3D equilibrium crystal shapes in the new light of STM and
AFM. Physics Reports, 2003. 385(1-2): p. 1-67.
Dhanaraj, G., et al., Springer Handbook of Crystal Growth. 2010, p. 3-8:
Springer.
Mullin, J.W., Crystallization. 1997, p. 233-238: Butterworth-Heinemann.
Kashchiev, D., Nucleation. 2000, p. 391-392: Elsevier Science.
Levi, A.C. and M. Kotrla, Theory and simulation of crystal growth. Journal
of Physics: Condensed Matter, 1997. 9(2): p. 299.
Sirdeshmukh, D.B., L. Sirdeshmukh, and K.G. Subhadra, Atomistic
Properties of Solids. 2011, p.57-58: Springer.

295

62.
63.
64.
65.
66.
67.
68.
69.

70.

71.

72.

73.
74.
75.

76.
77.
78.
79.
80.
81.
82.
83.
84.
85.

Ohachi, K.B.a.T., Crystal growth technology. 2003, p.39-41: William


Andrew, 2003.
Davey, R.J. and J. Garside, From Molecules to Crystallizers. 2001, p. 30:
Oxford University Press, USA.
Cejka, J., A. Corma, and S. Zones, Zeolites and Catalysis: Synthesis,
Reactions and Applications. 2010, p. 1-11: John Wiley & Sons.
Wright, J.D., Molecular Crystals. 1994, p. 6-7: Cambridge University Press.
Brittain, H.G., Polymorphism in pharmaceutical solids. 2009, p. 184-219:
Informa Healthcare.
Gay, P., The crystalline state: an introduction. 1972, p. 320-324: Oliver and
Boyd.
Chen, J., et al., Pharmaceutical Crystallization. Crystal Growth & Design,
2011. 11(4): p. 887-895.
Childs, S.L., et al., A Metastable Polymorph of Metformin Hydrochloride:
Isolation and Characterization Using Capillary Crystallization and Thermal
Microscopy Techniques. Crystal Growth & Design, 2004. 4(3): p. 441-449.
Bonafede, S.J. and M.D. Ward, Selective Nucleation and Growth of an
Organic Polymorph by Ledge-Directed Epitaxy on a Molecular Crystal
Substrate. Journal of the American Chemical Society, 1995. 117(30): p.
7853-7861.
Rodriguez-Spong, B., et al., General principles of pharmaceutical solid
polymorphism: A supramolecular perspective. Advanced Drug Delivery
Reviews, 2004. 56(3): p. 241-274.
Zaccaro, J., et al., Nonphotochemical, Laser-Induced Nucleation of
Supersaturated Aqueous Glycine Produces Unexpected -Polymorph. Crystal
Growth & Design, 2000. 1(1): p. 5-8.
Beach, S., et al., Control of the Physical Form of Salmeterol Xinafoate.
Organic Process Research & Development, 1999. 3(5): p. 370-376.
Dennehy, R.D., Particle Engineering Using Power Ultrasound1. Organic
Process Research & Development, 2003. 7(6): p. 1002-1006.
Beckmann, W., Crystallization of Pharmaceutical Compounds Polymorphs,
Pseudo-Polymorphs and Particle Formation. Engineering in Life Sciences,
2003. 3(3): p. 113-120.
Parmar, M.M., et al., Polymorph Selection with Morphology Control Using
Solvents. Crystal Growth & Design, 2007. 7(9): p. 1635-1642.
Rager, T. and R. Hilfiker, Cocrystal Formation from Solvent Mixtures.
Crystal Growth & Design, 2010. 10(7): p. 3237-3241.
Markov, I.V., Crystal Growth for Beginners: Fundamentals of Nucleation,
Crystal Growth and Epitaxy. 2003, p. 208-210: World Scientific.
Wright, J.D., Molecular Crystals. 1994, p. 9-10: Cambridge University Press.
Brittain, H.G., Polymorphism in pharmaceutical solids. 2009, p. 195: Informa
Healthcare.
Mullin, J.W., Crystallization. 2001, p. 358-363: Butterworth-Heinemann.
Brittain, H.G., Polymorphism in pharmaceutical solids. 2009, p. 186-188:
Informa Healthcare.
Bernstein, J., Polymorphism in Molecular Crystals. 2008: Oxford University
Press, USA.
Wright, J.D., Molecular Crystals. 1994, p. 7-8: Cambridge University Press.
Brittain, H.G., Polymorphism in pharmaceutical solids. 2009, p. 187: Informa
Healthcare.
296

86.
87.

88.
89.
90.

91.

92.
93.

94.
95.

96.

97.

98.
99.

100.

101.
102.

103.
104.
105.
106.

Mullin, J.W., Crystallization. 2001, p. 363-364: Butterworth-Heinemann.


Yu, Q., et al., Crystallization of the polymorphs of succinic acid via
sublimation at different temperatures in the presence or absence of water and
isopropanol vapor. Journal of Crystal Growth, 2012. 340(1): p. 209-215.
Mullin, J.W., Crystallization. 1997, p. 256: Butterworth-Heinemann.
Bogels, G., et al., Twin formation and morphology of vapour grown silver
halide crystals. Philosophical Magazine A, 1999. 79(3): p. 639-653.
Wagner, H.J., R.O. Loutfy, and C.-K. Hsiao, Purification and
characterization of phthalocyanines. Journal of Materials Science, 1982.
17(10): p. 2781-2791.
Selvaraj, S.L. and F.P. Xavier, Three-zone furnace: Apparatus to grow doped
crystals from two materials which have wide difference in sublimation
temperatures. Journal of Materials Science, 2003. 38(3): p. 555-560.
Brittain, H.G., Polymorphism in pharmaceutical solids. 2009, p. 197-198:
Informa Healthcare.
Das, D. and L.J. Barbour, Polymorphism of a Hexa-host: Isolation of Four
Different Single-Crystal Phases by Melt Crystallization. Journal of the
American Chemical Society, 2008. 130(43): p. 14032-14033.
Perrenot, B.a. and G. Widmann, Polymorphism by differential scanning
calorimetry. Thermochimica Acta, 1994. 234(0): p. 31-39.
Yoshioka, M., B.C. Hancock, and G. Zografi, Crystallization of indomethacin
from the amorphous state below and above its glass transition temperature.
Journal of Pharmaceutical Sciences, 1994. 83(12): p. 1700-1705.
Nehari, A., et al., Ti-Doped Sapphire (Al2O3) Single Crystals Grown by the
Kyropoulos Technique and Optical Characterizations. Crystal Growth &
Design, 2010. 11(2): p. 445-448.
Teshima, K., et al., Environmentally Friendly Growth of Calcium
Chlorapatite Whiskers from a Sodium Chloride Flux. Crystal Growth &
Design, 2006. 6(11): p. 2538-2542.
He, Z. and Y. Ueda, Flux Growth of -Cu2V2O7 Single Crystals in a Closed
Crucible. Crystal Growth & Design, 2008. 8(7): p. 2223-2226.
Hitomi, K., et al., Improved spectrometric characteristics of thallium bromide
nuclear radiation detectors. Nuclear Instruments and Methods in Physics
Research Section A: Accelerators, Spectrometers, Detectors and Associated
Equipment, 1999. 428(2-3): p. 372-378.
Hitomi, K., T. Onodera, and T. Shoji, Influence of zone purification process
on TlBr crystals for radiation detector fabrication. Nuclear Instruments and
Methods in Physics Research Section A: Accelerators, Spectrometers,
Detectors and Associated Equipment, 2007. 579(1): p. 153-156.
Mullin, J.W., Crystallization. 1997, p. 253-254: Butterworth-Heinemann.
Falckenberg, R., Flame Fusion Growth of Spinel and Sapphire Crystals for
ESFI SOS Technology. Journal of The Electrochemical Society, 1976. 123(1):
p. 63-65.
Xiao Guo Bi, Xu Dong Liu, and W. Niu, Flame-Fusion Growth of Rutile
Single Crystal. Advanced Materials Research, 2012. 535-537.
Lipson, H., Crystals and X-rays. 1970, p.17-19: Wykeham.
Whittaker, E.J.W., Crystallography: an introduction for earth science and
other solid state students. 1981, p.121-129: Pergamon Press.
Threlfall, T.L., Analysis of organic polymorphs. A review. Analyst, 1995.
120(10): p. 2435-2460.
297

107.

108.
109.

110.
111.

112.
113.

114.
115.
116.

117.

118.

119.

120.

121.

122.

123.

124.

Lu, J. and S. Rohani, Polymorphism and Crystallization of Active


Pharmaceutical Ingredients (APIs). Current Medicinal Chemistry, 2009.
16(7): p. 884-905.
Sheldrick, G., A short history of SHELX. Acta Crystallographica Section A,
2008. 64(1): p. 112-122.
McArdle, P., et al., A method for the prediction of the crystal structure of
ionic organic compounds-the crystal structures of o-toluidinium chloride and
bromide and polymorphism of bicifadine hydrochloride. CrystEngComm,
2004. 6(53): p. 303-309.
Parsons, S. and B. Gould, Rotax. University of Edinburgh, 2001.
Macrae, C.F., et al., Mercury CSD 2.0 - new features for the visualization and
investigation of crystal structures. Journal of Applied Crystallography, 2008.
41(2): p. 466-470.
Lipson, H. and H. Steeple, Interpretation of X-Ray Powder Diffraction
Patterns. 1970, p.221-222: Macmillan Publishers Limited.
He, G., et al., Direct Growth of -Glycine from Neutral Aqueous Solutions by
Slow, Evaporation-Driven Crystallization. Crystal Growth & Design, 2006.
6(8): p. 1746-1749.
Haines, P.J., Thermal methods of analysis. 1995, p. 63-66.
Haines, P.J., Thermal methods of analysis. 1995, p.22-24.
Roy, S., S. Aitipamula, and A. Nangia, Thermochemical Analysis of
Venlafaxine Hydrochloride Polymorphs 1-5 Crystal Growth & Design, 2005.
5(6): p. 2268-2276.
Andre, V., et al., Crystal Forms of the Antibiotic 4-Aminosalicylic Acid:
Solvates and Molecular Salts with Dioxane, Morpholine, and Piperazine.
Crystal Growth & Design, 2009. 9(12): p. 5108-5116.
Fox, D.M., et al., TGA decomposition kinetics of 1-butyl-2,3dimethylimidazolium tetrafluoroborate and the thermal effects of
contaminants. The Journal of Chemical Thermodynamics, 2005. 37(9): p.
900-905.
Chen, J.K. and T.B. Brill, Thermal decomposition of energetic materials 54.
Kinetics and near-surface products of azide polymers AMMO, BAMO, and
GAP in simulated combustion. Combustion and Flame, 1991. 87(2): p. 157168.
Park, K., J.M.B. Evans, and A.S. Myerson, Determination of Solubility of
Polymorphs Using Differential Scanning Calorimetry. Crystal Growth &
Design, 2003. 3(6): p. 991-995.
Caira, M.R., G. Bettinetti, and M. Sorrenti, Structural relationships, thermal
properties, and physicochemical characterization of anhydrous and solvated
crystalline forms of tetroxoprim. Journal of Pharmaceutical Sciences, 2002.
91(2): p. 467-481.
Caira, M.R., et al., Relationships between structural and thermal properties
of anhydrous and solvated crystalline forms of brodimoprim. Journal of
Pharmaceutical Sciences, 2007. 96(5): p. 996-1007.
Chadha, R., et al., Characterization of solvatomorphs of methotrexate using
thermoanalytical and other techniques. Acta Pharmaceutica, 2009. 59(3): p.
245-257.
Riddick, J.A., W.B. Bunger, and T.K. Sakano, Organic Solvents: Physical
Properties and Methods of Purification. 1970.

298

125.

126.

127.
128.
129.

130.

131.
132.

133.

134.
135.

136.
137.

138.
139.
140.
141.

142.

143.

Simonelli, A.P., S.C. Mehta, and W.I. Higuchi, Inhibition of sulfathiazole


crystal growth by polyvinylpyrrolidone. Journal of Pharmaceutical Sciences,
1970. 59(5): p. 633-638.
Mehta, S.C., et al., Rate of crystal growth of sulfathiazole and
methylprednisolone. Journal of Pharmaceutical Sciences, 1970. 59(5): p. 638644.
Reimer, L. and P.W. Hawkes, Scanning Electron Microscopy: Physics of
Image Formation and Microanalysis. 1998, p.1-3: Springer.
Bozzola, J.J. and L.D. Russell, Electron Microscopy: Principles and
Techniques for Biologists. 1999, p. 204-208: Jones and Bartlett.
Durbin, S.D. and G. Feher, Studies of crystal growth mechanisms of proteins
by electron microscopy. Journal of Molecular Biology, 1990. 212(4): p. 763774.
Grassmann, O. and P. Lbmann, Morphogenetic Control of Calcite Crystal
Growth in Sulfonic Acid Based Hydrogels. Chemistry A European Journal,
2003. 9(6): p. 1310-1316.
Holbrough, J.L., et al., Topographical Control of Crystal Nucleation. Crystal
Growth & Design, 2011. 12(2): p. 750-755.
Patterson, J., A. Bary, and T. Rades, Physical stability and solubility of the
thermotropic mesophase of fenoprofen calcium as pure drug and in a tablet
formulation. International Journal of Pharmaceutics, 2002. 247(1-2): p. 147157.
Li, Z.G., et al., New applications of electron diffraction in the pharmaceutical
industry: polymorph determination by using a combination of electron
diffraction and synchrotron X-ray powder diffraction techniques. Microsc
Microanal, 2002. 8(2): p. 134-8.
Gauglitz, G. and T. Vo-Dinh, Handbook of Spectroscopy. 2006, p.75-77:
John Wiley & Sons.
Threlfall, T., Polymorphs, Solvates and Hydrates, in Handbook of
Vibrational Spectroscopy. 2006, p.3557-3562, John Wiley & Sons, Ltd. p.
p.3557-3562.
Hilfiker, R., Polymorphism: in the Pharmaceutical Industry. 2006, p. 117125: John Wiley & Sons.
Hu, Y., et al., Quantitative analysis of sulfathiazole polymorphs in ternary
mixtures by attenuated total reflectance infrared, near-infrared and Raman
spectroscopy. J Pharm Biomed Anal, 2010. 53(3): p. 412-20.
Abu Bakar, M.R., et al., Investigation of the riddle of sulfathiazole
polymorphism. Int J Pharm, 2011. 414(1-2): p. 86-103.
Landau, R., B. Achilladelis, and A. Scriabine, Pharmaceutical Innovation:
Revolutionizing Human Health. 1999, p.243: Chemical Heritage Press.
Daniel, F., D.G. Rao, and C.J. Tyrrell, A pilot study of stanozolol for
advanced breast carcinoma. Cancer, 1991. 67(12): p. 2966-2968.
Resegotti L, D.C., Bertero L, Genovese A, Podest F, Testa D., Treatment of
aplastic anaemia with methenolone, stanozolol and nandrolone. A report of
130 cases. Panminerva Med., 1981. 23(4): p. 243-8.
Unal, S., et al., Stanozolol Treatment for Successful Prevention of Attacks of
Severe Primary Cryofibrinogenemia. Pediatric Blood & Cancer, 2010. 55(1):
p. 174-176.
Riviere, J.E. and M.G. Papich, Veterinary Pharmacology and Therapeutics.
2009, p.730: John Wiley & Sons.
299

144.
145.

146.
147.

148.

149.

150.

151.

152.

153.
154.
155.
156.

157.
158.

Rocco, W.L., SOLID-STATE CHARACTERIZATION OF STANOZOLOL.


Drug Development and Industrial Pharmacy, 1994. 20(11): p. 1831-1849.
Lisgarten, D.R., et al., Crystal structure of a synthetic anabolic agent:
Stanazolol ethanol solvate, 17 beta-hydroxy-17 alpha methylandrostano[3,2c]pyrazole ethanoate. Journal of Chemical Crystallography, 2003. 33(2): p.
131-137.
Etter, M.C., Encoding and decoding hydrogen-bond patterns of organic
compounds. Accounts of Chemical Research, 1990. 23(4): p. 120-126.
Lewis, T.C., D.A. Tocher, and S.L. Price, Investigating Unused Hydrogen
Bond Acceptors Using Known and Hypothetical Crystal Polymorphism.
Crystal Growth & Design, 2005. 5(3): p. 983-993.
Bhatt, P.M. and G.R. Desiraju, Form I of desloratadine, a tricyclic
antihistamine, in Acta Crystallographica: Section C. 2006, Wiley-Blackwell.
p. o362-o363.
Patrick McArdle and Desmond Cunningham, VOID: a PC program for the
location and display of voids in crystal structures. Journal of Applied
Crystallography, 2000. 33(3 Part 2): p. 993.
de Gelder, R., R. Wehrens, and J.A. Hageman, A generalized expression for
the similarity of spectra: application to powder diffraction pattern
classification. Journal of Computational Chemistry, 2001. 22(3): p. 273-289.
M. J. Frisch, G.W.T., H. B. Schlegel, G. E. Scuseria, M. A. Robb, J. R.
Cheeseman, G. Scalmani, V. Barone, B. Mennucci, G. A. Petersson, H.
Nakatsuji, M. Caricato, X. Li, H. P. Hratchian, A. F. Izmaylov, J. Bloino, G.
Zheng, J. L. Sonnenberg, M. Hada, M. Ehara, K. Toyota, R. Fukuda, J.
Hasegawa, M. Ishida, T. Nakajima, Y. Honda, O. Kitao, H. Nakai, T. Vreven,
J. A. Montgomery, Jr., J. E. Peralta, F. Ogliaro, M. Bearpark, J. J. Heyd, E.
Brothers, K. N. Kudin, V. N. Staroverov, R. Kobayashi, J. Normand, K.
Raghavachari, A. Rendell, J. C. Burant, S. S. Iyengar, J. Tomasi, M. Cossi, N.
Rega, J. M. Millam, M. Klene, J. E. Knox, J. B. Cross, V. Bakken, C. Adamo,
J. Jaramillo, R. Gomperts, R. E. Stratmann, O. Yazyev, A. J. Austin, R.
Cammi, C. Pomelli, J. W. Ochterski, R. L. Martin, K. Morokuma, V. G.
Zakrzewski, G. A. Voth, P. Salvador, J. J. Dannenberg, S. Dapprich, A. D.
Daniels, . Farkas, J. B. Foresman, J. V. Ortiz, J. Cioslowski, and D. J. Fox,
Gaussian 09 Revision A.1, Gaussian Inc. Wallingford CT 2009. .
Ishida, T., et al., Physicochemical properties of crystalline forms of
ethynylestradiol solvates: comparison of thermal behavior with X-ray crystal
structure. J Pharm Sci, 1989. 78(4): p. 274-80.
Pheasant, R., Polymorphism of 17-Ethinylestradiol. Journal of the American
Chemical Society, 1950. 72(9): p. 4303-4304.
Geerestein, J.V.v., J. Acta Crystallogr., 1987(C43): p. 1206-1209.
Guguta, C., et al., Structural Diversity of Ethinyl Estradiol Solvates. Crystal
Growth & Design, 2008. 8(3): p. 823-831.
Coombes, D.S., G.K. Nagi, and S.L. Price, On the lack of hydrogen bonds in
the crystal structure of alloxan. Chemical Physics Letters, 1997. 265(3-5): p.
532-537.
Kanters, J.A., et al., Non-hydrogen-bonded Hydroxyl Groups in Crystals.
Nature, 1969. 222(5191): p. 370-371.
Reddy, C.M., K.A. Padmanabhan, and G.R. Desiraju, Structure - Property
Correlations in Bending and Brittle Organic Crystals. Crystal Growth &
Design, 2006. 6(12): p. 2720-2731.
300

159.
160.

161.

162.

163.

164.

165.

166.
167.

168.
169.

170.
171.
172.

173.
174.

Reddy, C.M., et al., Structural basis for bending of organic crystals.


Chemical Communications, 2005(31): p. 3945-3947.
Reddy, C.M., S. Basavoju, and G.R. Desiraju, Sorting of polymorphs based
on mechanical properties. Trimorphs of 6-chloro-2,4-dinitroaniline.
Chemical Communications, 2005(19): p. 2439-2441.
Jin, T., et al., An efficient and convenient method for the synthesis of aromatic
sulfones catalysed by ZrO2/S2O82-solid superacid. Journal of Chemical
Research (Synopses), 2003. 2003(11): p. 721-723.
Boroujeni, K.P., ChemInform Abstract: Polystyrene Supported Al(OTf)3: A
Stable, Efficient, Selective, and Reusable Catalyst for Sulfonylation of Arenes
with Sulfonic Acids. ChemInform, 2010. 41(46): p. no-no.
McMahon, J.B., et al., Diarylsulfones, a new chemical class of nonnucleoside
antiviral inhibitors of human immunodeficiency virus type 1 reverse
transcriptase. Vol. 37. 1993. 754-60.
Cho, S.-D., et al., Suzuki-Miyaura coupling reaction of aryl chlorides using
di(2,6-dimethylmorpholino)phenylphosphine as ligand. Tetrahedron, 2007.
63(6): p. 1345-1352.
Hajipour, A.R. and S.E. Mallakpour, Organic Reactions under Solid-State
Conditions. Molecular Crystals and Liquid Crystals Science and Technology.
Section A. Molecular Crystals and Liquid Crystals, 2001. 356(1): p. 371-387.
Price, W.D., R.A. Jockusch, and E.R. Williams, Is arginine a zwitterion in
the gas phase? Vol. 119. 1997. 11988-9.
Polfer, N.C., R.C. Dunbar, and J. Oomens, Observation of zwitterion
formation in the gas-phase H/D-exchange with CH(3)OD: solution-phase
structures in the gas phase. J Am Soc Mass Spectrom, 2007. 18(3): p. 512-6.
Modau, E., D.C. Liles, and P.H.v. Rooyen, 2-(Biphenyl-4-yl)propan-2-ol.
Acta Crystallographica Section E, 2012. 68(3): p. o580.
Brock, C.P., J.R. Blackburn, and K.L. Haller, Structure of 4biphenylcarboxylic acid, C13H10O2: comparison of the TLS tensors derived
from independent-atom and rigid-group refinements. Acta Crystallographica
Section B, 1984. 40(5): p. 493-498.
P. Kronebusch, W. B. Gleson, and D. Britton, 4-Bromo-4'-cyano-biphenyl.
Cryst.Struct.Commun, 1976(5): p. 17.
Panina, N., et al., Study of the Needle-Like Morphologies of Two Phthalocyanines. Crystal Growth & Design, 2008. 9(2): p. 840-847.
McArdle, P., et al., Predicting and understanding crystal morphology: the
morphology of benzoic acid and the polymorphs of sulfathiazole.
CrystEngComm, 2010. 12(10): p. 3119-3125.
Gaultier, J. and C. Hauw, Structure de 1'-naphtoquinone. Acta
Crystallographica, 1965. 18(2): p. 179-183.
Sharp, J.H. and M. Lardon, Spectroscopic characterization of a new
polymorph of metal-free phthalocyanine. The Journal of Physical Chemistry,
1968. 72(9): p. 3230-3235.

301

Publications

302

You might also like