Professional Documents
Culture Documents
Laporan Biokim Protein
Laporan Biokim Protein
Submitted by:
Tarisa Adani
(12030194231)
Protein
Protein is found throughout the bodyin muscle,
bone, skin, hair, and virtually every other body part or
tissue. It makes up the enzymes that power many chemical
reactions and the hemoglobin that carries oxygen in your
blood. At least 10,000 different proteins make you what
you are and keep you that way.
Protein is built from building blocks called amino acids. Our bodies
make amino acids in two different ways: Either from scratch, or by
modifying others. A few amino acids (known as the essential amino acids)
must come from food.
Animal sources of protein tend to deliver all the amino acids we need.
peptide bonds into a chain. Within and outside of cells, proteins serve a
myriad of functions, including structural roles (cytoskeleton), as catalysts
(enzymes), transporter to ferry ions and molecules across membranes, and
hormones to name just a few.
With few exceptions, biotechnology is about understanding,
modifying and ultimately exploiting proteins for new and useful purposes.
To accomplish these goals, one would like to have a firm grasp of protein
structure and how structure relates to function. This goal is, of course,
much easier to articulate than to realize! The objective of this brief review
is to summarize only the fundamental concepts of protein structure.
Amino Acids
Proteins are polymers of amino acids joined
together by peptide bonds. There are 20 different amino
acids that make up essentially all proteins on earth.
Each of these amino acids has a fundamental design
composed of a central carbon (also called the alpha carbon) bonded to:
a hydrogen
a carboxyl group
an amino group
another is its unique side chain, and it is the side chain that dictates an
amino acids chemical properties. Examples of three amino acids are shown
below, and structures of all 20 are available. Note that the amino acids are
shown with the amino and carboxyl groups ionized, as they are at
physiologic pH.
acids. With rare exceptions, all of the amino acids in proteins are L amino
acids.
The unique side chains confer unique chemical properties on amino
acids, and dictate how each amino acid interacts with the others in a
protein. Amino acids can thus be classified as being hydrophobic versus
hydrophilic, and uncharged versus positively-charged versus negativelycharged. Ultimately, the three dimensional conformation of a protein - and
its activity - is determined by complex interactions among side chains.
Some aspects of protein structure can be deduced by examining the
properties of clusters of amino acids. For example, a computer program
that plots the hydrophobicity profile is often used to predict membranespanning regions of a protein or regions that are likely to be immunogenic.
and
fruits.
If
you're
sensitive
to
dietary
Test tube
Spectronic UV-Vis
Biuret reagent
F. Procedure of Experiment
Preparation of Sample
Liquid Sample
-
Diluted sufficiently
Sample
Tube I
Preparation of Standard
Tube II
- Added 1 mL
standard solution
with the content
1 mg/mL protein
- Added 1 mL
standard solution
with the content
2 mg/mL protein
Tube III
Tube IV
- Added 1 mL
standard solution
with the content
3 mg/mL protein
- Added 1 mL
standard solution
with the content
4 mg/mL protein
Tube V
- Added 1 mL
standard solution
with the content
5 mg/mL protein
Result
Result
Result
G. Table of Experiment
N
o.
1.
Procedur
Sample Preparation
Liquid Sample
(duck egg protein)
Diluted sufficiently
Sample
Experiment Result
Before:
Duck Egg protein :
colorless thick
Aquades : colorless
Biuret : blue
After :
Duck egg
protein+aquades:
colorless
Duck egg
protein+aquades+
filter: colorless
Duck egg
protein+aquades+
flter+ biuret : blue
solution
Hypothesis/Reaction
Sample protein color is
colorless
Conclusion
Sample protein
color is colorless.
2.
Making Standard
Tube I
Tube
II
- Added 1
mL
standard
solution
with the
content 1
mg/mL
protein
Tube
III
- Added
1 mL
standard
solution
with the
content 2
mg/mL
protein
Tube
IV
- Added 1
mL
standard
solution
with the
content 3
mg/mL
protein
Before :
Sample : colorless
Biuret : blue solution
Tube
V
- Added 1
mL
standard
solution
with the
content 4
mg/mL
protein
- Added 1
mL
standard
solution
with the
content 5
mg/mL
protein
After :
Sample+biuret :
1 mg : blue
2 mg : purplish blue
3 mg : violet
4 mg : violet (++)
5 mg : violet (+++)
Protein
concentration
proportional
with the
maximum
wavelength
The higher
concentration
the violet
(darken) of the
solution
The linear
equation from
the protein
standard curve
is
y=
0.044x+0.008
R2 =0.980
3.
Result
Before :
Sample : colorless
Biuret : blue solution
Aquades : colorless
After :
Aquades+Biuret
(blanko solution) :
blue solution
4.
Result
Before :
Sample : colorless
Biuret : blue solution
Aquades : colorless
After
Sample+aquades :
colorless
Sample+biuret :
blue solution
Sample+biuret+inc
ubation : blue
solution
The equation
based on the
curve is
y= 0.044x+0.008
The Biuret reagent is R2 =0.980
made
of
sodium
hydroxide (NaOH) and Sample
hydrated
copper(II) concentration :
sulfate, together with 1. 1.34
potassium
sodium 2. 1.59
[4]
tartrate.
Potassium 3. 1.20
sodium
tartrate[5]
is
added to complex to The average of
stabilize the cupric ions. sample
Proteins in the alkaline concentration is
environment reduce Cu2+ 1.38
to Cu+, which forms a
coordination
complex
with proteins, leading to
a blue to light violet
color change.
and
hydrated
copper(II)
sulfate,
together
with
I. Conclusion
-
Sample concentration :
1. 1.34
2. 1.59
3. 1.20
The average of sample concentration is 1.38
J. Attachment
:
Biuret reagent
Incubated
K. Task :
1. Make the standard curve of concentration vs absorbance.
By using that standard curve determine the content of
protein of sample!
2. Is peptida will give a positive reaction for biuret reagent? If
it is true, how to determine the content of protein mixed
with peptida?
Answer:
1.
concentrati Waveleng
on
0
1
2
3
4
5
th
0
0,049
0,108
0,154
0,196
0,215
Y = 0,044x + 0,008
Y = 0,044x + 0,008
0,078 = 0,044x +
0,008
0,059 = 0,044x
0,07 = 0,044x
X = 1,34
x = 1,59
Y = 0,044x + 0,008
0,061 = 0,044x + 0,008
0,053 = 0,044x
X = 1,20
2. Yes, because biuret is one of the best way to determine the
content of protein of a solution. In base solution, Cu 2+ will
form a complex with peptide bond of a protein, so that
producing a purple color which can be identified with
spectronic UV-Vis at wavelength 520 nm. This absorbance
is directly compare with concentration of protein and
doesnt depend on the kind of protein because all of
protein basically have the same amount of peptide bond
per weigh unit.
L. References