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DOI 10.1007/s10571-010-9599-4
REPORT
Received: 31 May 2010 / Accepted: 3 September 2010 / Published online: 3 November 2010
Ó Springer Science+Business Media, LLC 2010
Abstract The SNARE proteins, syntaxin, SNAP-25, and Keywords Exocytosis SNAP-25 Syntaxin FLIM
synaptobrevin have long been known to provide the driving
force for vesicle fusion in the process of regulated exocy-
Abbreviations
tosis. Of particular interest is the initial interaction between
SNARE Soluble N-ethylmaleimide-sensitive-factor attach-
SNAP-25 and syntaxin to form the t-SNARE heterodimer,
ment protein receptor
an acceptor for subsequent synaptobrevin engagement.
SNAP-25 Synaptosome-associated protein of 25 kD
In vitro studies have revealed at least two different dynamic
FLIM Fluorescence lifetime imaging microscopy
conformations of t-SNARE heterodimer defined by the
STED Stimulated emission depletion microscopy
degree of association of the C-terminal SNARE motif of
PALM Photoactivatable localisation microscopy
SNAP-25 with syntaxin. At the plasma membrane, these
proteins are organized into dense clusters of 50–60 nm in
diameter. More recently, the t-SNARE interaction within
these clusters was investigated in live cells at the molecular
level, estimating each cluster to contain 35–70 t-SNARE Introduction
molecules. This work reported the presence of both partially
and fully zippered t-SNARE complex at the plasma mem- Investigating the molecular mechanics of vesicle fusion
brane in agreement with the earlier in vitro findings. It also allows us to further understand regulated exocytosis, the
revealed a spatial segregation into distinct clusters con- process through which a vesicle can release its secretory
taining predominantly one conformation apparently pat- cargo into the extracellular space in response to a rise in
terned by the surrounding lipid environment. The reason for intracellular calcium (Rizo and Sudhof 2002; Sollner et al.
this dynamic t-SNARE complex in exocytosis is uncertain; 1993b). In both neurons and neuroendocrine cells vesicles
however, it does take us one step closer to understand the are thought to undergo a number of steps before secretion.
complex sequence of events leading to vesicle fusion, These vesicles are thought to ‘‘dock’’ at the plasma mem-
emphasizing the role of both membrane proteins and lipids. brane, mediated by a combination of protein–protein and
protein–lipid interactions, where they then undergo a
A commentary to this article can be found at doi: poorly defined molecular priming step before calcium-
10.1007/s10571-010-9610-0. dependent fusion occurs (Lam et al. 2008; Sollner et al.
1993a; Sudhof 2004).
A. R. Dun R. R. Duncan (&)
A vesicle may fuse with the plasma membrane driven by
Centre for Integrative Physiology, University of Edinburgh
Medical School, Hugh Robson Building, George Square, an interaction between three key proteins, synaptobrevin,
Edinburgh EH8 9XD, UK SNAP-25 and syntaxin-1 (Fig. 1a). These proteins belong to
e-mail: rory.duncan@ed.ac.uk the highly conserved SNARE family and are essential for
exocytosis (Hayashi et al. 1994; Jahn and Niemann 1994;
C. Rickman
School of Engineering and Physical Sciences, Sollner et al. 1993a). Earlier work which leads to the now
Heriot-Watt University, Edinburgh EH14 4AS, UK widely recognised SNARE protein complex configuration
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1322 Cell Mol Neurobiol (2010) 30:1321–1326
demonstrated that when incubated in vitro, the three The Sequential Formation of a Core Complex
SNAREs assemble spontaneously into an SDS resistant core
complex (Clary et al. 1990; Hayashi et al. 1994; Sollner et al. SNARE proteins are alpha helical in complex and inves-
1993a). Further work established that the formation of this tigation into how the core complex forms has relied upon
complex is strictly sequential and initiated by the association the in-depth analysis of these structures as well as the
of the target-SNAREs, SNAP-25, and syntaxin1, most likely identification of the essential binding regions of each of the
in a 1:1 stoichiometry at the plasma membrane (Fig. 1b) interacting helices (Chapman et al. 1994; Sollner et al.
(Chen et al. 2001; Fasshauer and Margittai 2004; Rickman 1993a; Sutton et al. 1998). Among these are the highly
et al. 2004). The ‘‘docking’’ of vesicles to the plasma conserved SNARE motifs which are integral to the for-
membrane relies on other proteins, notably synaptotagmin mation of the core complex. Syntaxin contains one motif
and munc18 (de Wit et al. 2009). Electrophysiological within its C-terminal SNARE helix whereas SNAP-25 has
studies suggested that a poorly defined molecular ‘‘matura- two, present at the C- and N-termini, which are separated
tion’’ follows, involving the association of priming factors, by a linker region. The SNAP-25 linker region contains
which act to catalyze the fusion event (Fiebig et al. 1999; multiple cysteine residues at amino acids 84–92, which are
James et al. 2009; Sutton et al. 1998; Weber et al. 1998). The known to be sites for attachment to the membrane through
t-SNAREs interact with high affinity and so these two pro- thioester linkage to palmitic acid (Oyler et al. 1989; Veit
teins are trafficked independently of each other to prevent et al. 1996). Conversely, syntaxin1 is associated with the
ectopic interactions occurring prematurely (Arunachalam membrane via a transmembrane domain which allows the
et al. 2008; Hata et al. 1993; Medine et al. 2007). After C-terminal alpha helical coil to protrude into the intracel-
formation of the t-SNARE heterodimer acceptor complex, lular space where it associates with the N-terminal alpha
the vesicle-associated synaptobrevin can bind, forming a helix of SNAP-25 (Hayashi et al. 1994). Cleavage of the
tight 4-helical ternary SNARE complex. C-terminus of SNAP-25 with Botulinum neurotoxin sero-
SNARE proteins are well established as key facilitators type A demonstrates the necessity of this second SNARE
of regulated exocytosis and the dissection of their structure helix for synaptobrevin binding and the full zippering of
and binding partners has been extensively studied. the SNARE complex (Chapman et al. 1994).
Although the individual components involved have been The identification of the SNARE motif predicted that the
analyzed in great detail in vitro, how they come together in SNARE complex would follow Crick’s classic model for
the cell and the exact site of vesicle fusion in relation to the coiled-coil structure (Crick 1953). It is now known that
these molecules remains speculative. Here we review one the hydrophobic residues within the SNARE motif pack
component in particular, the t-SNARE heterodimer com- together in the centre of the four helical ternary SNARE
plex, to see how this has enhanced our knowledge of reg- complex (Fasshauer et al. 1998; Sutton et al. 1998) and this
ulated exocytosis and how super-resolution imaging is proposed to subsequently provide the required energy for
techniques may provide a route to finally dissect the role of lipid bilayer merger (Hanson et al. 1997; Li et al. 2007; Lin
the SNAREs in regulated exocytosis. and Scheller 1997). In addition the four SNARE helices
Donor
a b
FRET
Donor Acceptor
SNAP-25 Acceptor
Syntaxin
VAMP
Donor Acceptor
<10 nm
FRET
Förster Resonance Energy The t-SNARE complex
The ternary SNARE complex Transfer (FRET)
Fig. 1 The examination of SNARE proteins at the plasma membrane. FRET to occur when the fluorophores are conjugated to the
a The four SNARE helices interact at the membrane to form a tight N-terminus of syntaxin and C-terminus of SNAP-25. A 3-helical
4-helical bundle bringing opposing bilayers close enough for fusion complex or one that is only partially zippered (for example, with the
(adapted from Sutton et al. 1998). b FRET can occur between two SNAP-25 N-terminal helix partly dissociated) will report a different
fluorophores, with overlapping excitation and emission spectra, when FRET ‘‘efficiency’’, because the donor and acceptor fluorophores are
the inter-fluorophore distance is less than approximately 10 nm. This further apart. Quantifying FRET in every pixel of an image therefore
is therefore indicative of interaction. t-SNAREs in complex allow can report a change in interaction, with spatial resolution
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Cell Mol Neurobiol (2010) 30:1321–1326 1323
each contribute a number of ionic residues, one arginine, Such reconstituted bilayer studies have proven useful for
and three glutamine, which are highly conserved across the examining the t-SNAREs in their membrane-anchored
SNARE family (Sutton et al. 1998). These residues line up form. It is also possible to examine endogenous proteins on
within the hydrophobic core of the ternary SNARE com- or in native plasma membrane sheets by ‘‘unroofing’’ cul-
plex, forming a hydrogen bonding network, which gives tured neuroendocrine cells (Avery et al. 2000; Lang 2003).
both strength and registration to the interactions. Stimulated emission depletion (STED) microscopy of these
The alpha-helicity of proteins can be quantified using sheets has revealed homodimers of syntaxin1 residing in
circular dichroism (CD) spectroscopy (Fersht 1999) which 50–60 nm clusters at the plasma membrane (Sieber et al.
can provide insights into the structure of a complex and its 2007). This is a different t-SNARE configuration to that
individual parts. Formation of the core complex has been described from the in vitro studies discussed so far, and
shown to be associated with a dramatic increase in alpha- while the exact mechanism required for homodimerization
helicity, supporting the existence of a coiled–coiled sec- of syntaxin1 molecules remain speculative; this membrane
ondary structure (Fasshauer et al. 1997). The C-terminal bound complex is highly plausible (Laage et al. 2000;
helix of SNAP-25 does not seem to be essential in this Rickman et al. 2005; Sieber et al. 2006). SNAP-25 is
change, but is not redundant. CD analysis suggested this believed to reside within close proximity to these syntaxin1
second SNAP-25 SNARE helix does undergo a structural clusters (Sieber et al. 2006), which would provide a pos-
change upon binding to syntaxin1, and that this could be sible interface for heterodimer formation and site for ves-
the rate limiting step in synaptobrevin association (Fass- icle fusion. The intermediate binary t-SNARE complex
hauer et al. 1997; Fasshauer and Margittai 2004; Hayashi could still exist within this model as SNAP-25 is shown to
et al. 1994). Interestingly, when isolating only the N-ter- interact with the syntaxin1 clusters, in a short-lived man-
minus of SNAP-25 and the C-terminus of syntaxin1 in ner, with only its C-terminal helices (Halemani et al. 2010).
vitro, an increase in alpha-helicity was also observed. This It is well established that the t-SNAREs form a highly
implies that the t-SNARE structure can begin to form, in a regulated and functional heterodimer complex in plasma
coiled-coil manner, with just two helices and in vitro can membrane clusters, in cultured cells. In addition, similar
exist as an intermediate binary conformation (Fasshauer organization has been observed in a study using adrenal
et al. 1997). medulla slices and proposed to be the site for exocytosis
(Lopez et al. 2007). The observation of different t-SNARE
intermediate binary complexes both in vitro, in lipid
Observing the Membrane from the Inside Out bilayers, native membrane sheets, and in primary prepa-
rations raises the question: are these two configurations
Although in vitro analyses allow the thorough examination present in intact live cells and if so how are the t-SNAREs
of protein properties and structures, the orientation of such organized at the plasma membrane?
proteins as well as their binding partners may be different
when membrane associated. By incubating proteins on a
supported lipid bilayer in vitro, it is possible to observe The t-SNARE Complex at Molecular Resolution
them in their membrane bound state. One such study
combined this technique with single molecule Förster Examining and understanding protein–protein interactions
resonance energy transfer (smFRET) using fluorescently- in live cells requires a degree of resolution not possible
conjugated recombinant syntaxin1 and SNAP-25 (Weninger through conventional optical techniques. However, the
et al. 2008). This technique revealed two distinct quantification of FRET between two fluorescently labeled
sub-populations of t-SNARE heterodimer undergoing molecules can provide information by reporting the degree
varying types of interaction. One population consisted of a of interaction through a change in fluorescence properties
‘‘fully zippered’’ t-SNARE complex with all three helices (Fig. 1b).
associated, whereas a second major group appeared to have Studies in live cells using intensity based FRET support
a partially zippered structure with only two helices in previous in vitro findings of alternative t-SNARE com-
complex. In the latter conformation the second, C-terminal, plexes, where only the C-termini of SNAP-25 is bound
SNARE helix of SNAP-25 was dissociated, similar to the with high affinity, to syntaxin1 (An and Almers 2004;
binary complex seen originally in vitro (Fasshauer et al. Wang et al. 2008). In addition, this conformation was seen
1997; Weninger et al. 2008). Interestingly, the t-SNARE to be induced upon calcium influx implying a possible role
proteins were seen to transition between the fully- and in the priming step prior to fusion (An and Almers 2004).
partially-zippered states in a reversible manner at the lipid The FRET can be estimated either through change in
membrane, on a time scale of seconds (Weninger et al. intensity, as mentioned above, or quantified more directly
2008). using FLIM (Fig. 2a), a technique which provides data
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Fig. 2 SNARE protein molecular behavior in living cells. a we can mCerulean-syntaxin1a at the plasma membrane of a PC12 cell, co-
see that the 2-photon intensity image clearly shows SNAP-25 as expressing EYFP-SNAP-25 (left panel). All clusters appear identical.
homogeneous puncta on the plasma membrane but that FRET-FLIM Scale bar: 500 nm. The boxed area in the intensity image is enlarged
imaging is required to reveal heterogeneities between these clusters in the TCSPC-FLIM (right panel) image. Here, color represents the
(Rickman et al. 2010). Different colors represent areas of different donor fluorescence lifetime, and brightness the intensity. Differences
donor fluorescent lifetime (see color scale bar) and therefore varying in color signify altered inter-fluorophore distances and thus ‘‘FRET
degrees of interaction. Further discussion of FLIM, and its applica- efficiencies’’. b TIRF-PALM localization map showing single
tion, can be found in these references (Becker 2005; Altenbach et al. molecules of SNAP-25 on the plasma membrane of a PC12 cell.
2010). b we demonstrate the ability to visualise single molecules of Scale bar: 500 nm. The boxed area in the summed TIRFM image (left
SNAP-25 at high resolution at the plasma membrane using the super panel) is enlarged in the TIRF-PALM rendered image (right panel).
resolution technique photoactivation localization microscopy (PALM; Scale bar: 5 nm. A non-random distribution of single SNAP-25
for recent application of this technique to SNARE proteins see molecules is apparent at the plasma membrane. Scale bar: 5 nm, color
(Rickman et al. 2010)). This is displayed in contrast to the same cell scale bar: 1250–2250 ps. Approximate certainty a (left panel) 200 nm
imaged through the conventional microscopy technique, TIRFM. resolution, (right panel) 20 nm localisation, b (left panel) 200 nm
PALM allows for the highest possible resolution analysis of the resolution, (right panel) \10 nm inter-fluorophore distance reported.
molecular spatial organisation, which in this case demonstrates a non- This figure is modified from Rickman et al. (2010) (Color figure
random pattern. a Two-photon intensity image showing clusters of online)
unaffected by donor/acceptor ratio or concentration may be that the two different states observed, one an
(Becker 2005). TCSPC–FLIM uniquely delivers informa- apparently more fully formed complex than the other, relate
tion describing both interaction (lifetime) and the propor- to the docked or primed status of the vesicle (Nofal et al.
tion of donor molecules participating in energy transfer in 2007). It has also been suggested that the surrounding lipid
each pixel of the image. This allows the influence of environment could play a significant role in the molecular
proximity and number of interacting partners to be dis- organisation of these proteins at the plasma membrane
sected. A SNARE-specific FLIM review (Altenbach et al. (Rickman et al. 2010). Thus, although the functional
2010) and a general text (Becker 2005) on TCPSC provide importance of this spatial arrangement and the existence of
a complete background to this technique. the alternative binary complex for vesicle fusion are still not
More recently single molecules of SNAP-25 and syn- well defined; it seems investigating protein, lipid, and vesicle
taxin1 have been visualized at the plasma membrane using relationships may provide important mechanistic insights.
the super-resolution technique known as Photoactivatable
localisation microscopy (PALM). This work supports the
SNARE clustering hypothesis as the single molecule dis-
tributions across the membrane are non-random (Rickman Summary
et al. 2010) (Fig. 2b).
Whether the t-SNARE molecules interact in these clusters The fusion of a secretory vesicle with the cell membrane is
at the cell surface, or what the organizational significance of a highly regulated process with the formation of t-SNARE
this molecular arrangement is, has remained elusive until complex playing a pivotal role. It is now evident that the
recently. Work using FLIM (Rickman et al. 2010) confirmed t-SNAREs are patterned in an organized manner at the
that the SNARE clusters at the plasma membrane of live cells plasma membrane where they form a dynamic complex
consist predominantly of t-SNAREs in a binary complex. It existing as either a fully or partially zippered heterodimer.
is credible that either SNAP-25 may be bound to the Further work is required to dissect the functional signifi-
periphery of the syntaxin1 clusters (Sieber et al. 2007), or cance of this plasma membrane organization, the role, if
alternatively, this observation could provide an alternative any, of the underlying lipids, and the impact this may have
model for SNARE cluster organization. Importantly, clusters on vesicle fusion.
at the cell surface were heterogeneous in their interaction
Acknowledgments This work was supported by Wellcome Trust
status, with predominantly fully-zippered or partially-zip- and Medical Research Council project grants to RRD and a BBSRC
pered complex organized into distinct regions (Fig. 2a). It Studentship to AD.
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