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SIViP (2012) 6:41–53

DOI 10.1007/s11760-010-0170-z

ORIGINAL PAPER

Removal of ring artifacts in micro-CT imaging using iterative


morphological filters
Md. Kamrul Hasan · Fazle Sadi · Soo Yeol Lee

Received: 17 May 2009 / Revised: 31 May 2010 / Accepted: 10 June 2010 / Published online: 29 June 2010
© Springer-Verlag London Limited 2010

Abstract In this paper, a novel technique based on morpho- 1 Introduction


logical filtering is proposed for the detection and removal of
ring artifacts with different patterns, e.g., sharp isolated rings High-resolution μ-CT and C-Arm CT images reconstructed
with varying intensity, isolated light rings, and band rings, from the 2D X-ray projection data acquired with a flat-panel
from the μ- and/or C-Arm CT images. To optimize the per- detector (FPD) are often corrupted by serious ring artifacts.
formance of our ring removal algorithm, three different types They appear in the form of circles in the reconstructed image.
of iterative morphological filters (IMFs) are proposed here Detector gain inhomogeneities and/or defective detector pix-
for different ring patterns. All the IMFs detect the positions els cause ring artifacts in the reconstructed image. The ring
of the defective detector elements using the mean curve con- artifacts severely impair visualization and quantification of
structed from the corrupted sinogram. However, the basic the anatomic and pathological features. Moreover, in digi-
principle of sinogram correction differs. For the elimination tal computation these artifacts are considered as an integral
of sharp intense rings, the IMF is directly applied on the raw part of the image by the computer. As a result, the whole
projection data for each angle of view, whereas in other cases analysis and diagnostic process cannot be automated. As the
an estimate of the ring-noise-free mean curve is first obtained ring artifacts complicate the post-processing and quantitative
to remove the ring generating artifacts from the sinogram analysis of the data, removal or at least significant reduction
data through a normalization process. The effectiveness of of these artifacts is essential.
the proposed IMFs is tested for a variety of μ-CT acquired Severity of the ring artifact problem can be somewhat
images. Experimental results show that the IMFs perform reduced using the X-ray image intensifiers (XRII) instead of
better than the previously reported techniques in the removal the FPDs. However, low signal-to-noise (SNR) and nonho-
of ring artifacts from real μ-CT images. mogeneous image quality across the output image due to the
convex input screen of XRIIs limits their use. Therefore, the
Keywords Ring artifact · Sharp ring · Band ring · Mean C-Arm CTs and μ-CTs are still commonly equipped with
curve · Sinogram correction · Iterative morphological filters FPDs because of their several advantages over the XRIIs.
Despite their high sensitivity, these detectors, however, suf-
fer from pixel nonuniformity. Since the nonuniformity is
often fluctuating depending on the operating conditions
(e.g., tube voltage and tube current), it has been very dif-
Md. K. Hasan · F. Sadi ficult to remove the ring artifacts from the CT images taken
Department of Electrical and Electronic Engineering,
with FPDs. Though the detector calibration scheme and built-
Bangladesh University of Engineering and Technology,
Dhaka 1000, Bangladesh in white image correction algorithm can reduce the detec-
e-mail: khasan@eee.buet.ac.bd tor pixel problem to some extent, the ring artifact problem
cannot be avoided in the 2D radiographic projection data.
Md. K. Hasan · S. Y. Lee (B)
Even a small imperfection produces ring artifact in the recon-
Department of Biomedical Engineering,
Kyung Hee University, Yongin, South Korea structed image. Ring correction algorithm as a post-processor
e-mail: sylee01@khu.ac.kr is, therefore, indispensable while using the FPDs.

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Several methods have been reported so far to suppress the band rings. As the individual rings mostly show up in two
the ring artifacts from CT images [1–7]. Ring artifact reduc- patterns, intense and light, different filters are also designed
tion without impairing the image quality is still a challenging for them. In our proposed method, customized morpholog-
problem for the researchers. Directly processing the ring arti- ical filters are applied on the mean curve to detect the ring
fact corrupted image as reported in [2] is one way which may positions for these three kinds of rings. For the estimation of
be referred to as the post-processing approach. While it may intense ring corrupted regions, a novel method based on the
be tempting to detect and remove the artifact in the image morphological filters is proposed for direct correction of only
domain rather than the sinogram domain, the extra artifacts the defective spots of the sinogram data. For the identification
inherently generated along with the ring artifacts because of of defective detector elements, the mean curve is computed
the filtered back projection reconstruction procedure cannot from the raw projection data, and a dynamic threshold is
be easily detected and removed by signal processing tech- defined for this purpose. The filter is implemented in an iter-
niques in the image domain. Since it is the 2D radiographic ative manner and the stopping criterion is defined by a rule
projection data, generally known as the sinogram [8], which of thumb. After detecting the ring positions from the mean
are actually corrupted, some reported methods dealt with the curve processed by the morphological filter, the estimation
raw sinogram, referred to as the preprocessing approaches part is carried out directly on the sinogram through the IMF
[1,3,4,6,7]. At early stages, the flat-field method was pro- suitable for the sharp ring elimination. The inherent strength
posed in the literature [9]. This involved multi-time scanning of this approach is not to distort the uncorrupted regions in
through air prior to main scanning of the object. Though the the sinogram and thus no processing error is introduced. For
destruction of useful information was checked in this method, the light individual rings and band rings, the estimation of
the expected amount of ring reduction was not achieved [2]. the corrupted regions in the sinogram is made through a nor-
Later on, the method of smoothing the curve of mean attenu- malization principle [6]. This is because the ring causing
ation at each detector over all angles—which will be referred deviations with small magnitude lie within the vicinity of the
to as the mean curve in this work—has been studied by many important details of the image in the sinogram. Therefore,
researchers. Adoption of moving average (MA) as a smooth- defining a precise threshold for the direct sinogram correc-
ing technique has been frequently practiced as it results in tion often becomes difficult, and there is always a risk of
significant reduction of the ring artifacts [3,6]. But along smoothing the image details. In such cases, the normaliza-
with this appreciable amount of ring reduction, this method tion of the sinogram through the estimated and corrupted
also results in a significant loss of information, blurring effect mean curves provides a defensive approach, minimizing the
and vulnerability to invasion of other artifacts on the recon- risk of image distortion. The performance of the IMF is fur-
structed image. As the median is better than the mean at ther enhanced by calculating the gross variation of the mean
preserving the sharp details due to image feature, the median curve, which assists in defining a proper convergence crite-
filtering (MedF) method has been also used by the research- rion for the proposed morphological filter.
ers [4,6]. The median filter is particularly good in remov- The paper is organized as follows. Section 2 states the
ing the sharp noise such as, shot noise or “salt and pepper” basic principle to be used for the ring detection and elimina-
noise, while preserving the edges. Thus, the MedF may be tion. Section 3 describes the iterative morphological filters
suitable for the reduction of isolated rings but not for the for the removal of ring artifact from the CT images. The
clustered rings. In [10], Bovik provides a detailed analysis detection and elimination process for different ring patterns
of the artifacts introduced by the median filters. In [4], two are outlined in the subsections. The convergence of the itera-
approaches based on the type of detector faults have been tive morphological filters is described in Sect. 4. The experi-
adopted. The location variant defective cells were corrected mental results for the real micro-CT images are presented in
using the MedF, while the location invariant defective cells Sect. 5. Finally, the paper concludes with some remarks in
were corrected using an interpolation method after the detec- section VI.
tion via the wavelet transform. In [1], a frequency domain
filtering technique has been reported for the removal of ring
artifacts. The basic concept was to use a low-pass filter to 2 Basic principle
suppress the high-frequency components resulted from the
ring artifacts. The filter cut-off frequency and order have to The error E(t) in the raw projection data P̃(θ, t) causing ring
be appropriately selected depending on the type and number artifact in the reconstructions can be related to the error-free
of defects in the raw projection data. projection data P(θ, t) as follows [6]:
In this paper, we develop a new ring artifact removal
P̃(θ, t) = P(θ, t) + E(t), for all θ (1)
method based on the mathematical morphology (MM). The
proposed artifact reduction procedure consists of two steps: It can be assumed that P̃(θ, t) averaged over θ would be
one to remove the individual rings and the other to remove fairly smooth over t but E(t) would not. Then, an estimate

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