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Editorial

Getting Into the Rhythm With CRISPR


Thierry VandenDriessche, Marinee K. Chuah

I nherited cardiac arrhythmias are a major health issue of


unmet medical need that can cause significant morbidity
and mortality. If left untreated, it represents a major cause of
improvement of adrenergically stimulated ventricular tachy-
cardia. Nevertheless, the overall efficacy of this shRNA-based
strategy was limited because only a net 15% reduction in
sudden death in childhood. Available treatments include β- RyR2 expression could be achieved and challenges related to
blockers and implantable defibrillators, but these are only par- specificity remained. Moreover, this strategy would require
tially effective and can still provoke significant adverse events, sustained shRNA expression throughout the entire lifespan of
including death. Catecholaminergic polymorphic ventricular the affected patients, but it is currently not known how long
tachycardia is an autosomally transmitted form of inherited expression from AAV vectors will last.
cardiac arrhythmia that is caused in the majority of the cases To overcome some of these limitations, gene-editing ap-
by gain-of-function missense mutations in the gene encod- proaches could be used instead that directly target the mutated
ing the RYR2 (ryanodine receptor 2). Such mutations in the RyR2 gene itself at the DNA level. In this issue, Pan et al3
corresponding RYR2 gene result in mutant subunits that can established proof of concept that selective inactivation of the
be incorporated into multimeric RYR2 receptors compromis- mutant Ryr2 gene could be achieved using the CRISPR (clus-
ing their function. Consequently, these mutant dysfunctional tered regularly interspersed short palindromic repeat)/Cas sys-
RYR2 receptors promote uncontrolled calcium leakage from tem (Figure). The CRISPR/Cas system is a natural defense
the sarcoplasmic reticulum triggering potentially lethal ar- system in prokaryotes that targets invading phages or plasmids
rhythmia. To increase the proportion of fully functional wild- by sequence-specific DNA cleavage that has been adapted for
type RYR2 channels, the mutant RYR2 subunits should be use in eukaryotic cells.4 The true merit of the CRISPR system
removed from the multimeric complexes. To selectively in- is that a single Cas9 endonuclease can be used in combination
hibit expression of these RYR2 mutant subunits gene therapy with any guide (g)RNA of choice to induce a site-specific dou-
could be used as an alternative solution to treat these types of ble strand DNA break in the desired target genes that stimulate
dominantly inherited cardiac arrhythmias that may overcome gene repair by either nonhomologous end joining or homolo-
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the limitations of the current standard of care. gous recombination in the presence of a homologous DNA
Article, see p 953 template. This obviates the need to design a separate nuclease
for each intended DNA target sequence, greatly enhancing
Adeno-associated viral vectors (AAV) are well suited the versatility of this gene-editing platform. Nonhomologous
to deliver therapeutic genes into the myocardium, particu- end joining can result in the insertion or deletion (ie, indels)
larly those based on the AAV1 and AAV9 serotypes that of nucleotides at the target locus, resulting in frame shift or
show increased cardiotropism.1 Initial preclinical studies in a nonsense mutations leading to a loss-of-function phenotype.
mouse model of catecholaminergic polymorphic ventricular Though gene editing using CRISPR/Cas9 has been particu-
tachycardia had shown that this could be achieved by gene larly effective to generate transgenic animals containing spe-
therapy using AAV9 vectors expressing a short-hairpin (sh) cific mutations in the desired target loci, in vivo gene editing
RNA specifically designed to selectively silence the mutant in postnatal animals has been more challenging. Nevertheless,
Ryr2 gene by RNA interference.2 Consequently, this resulted recent studies showed that liver,5,6 heart, and skeletal mus-
in a relatively reduction in total RyR2 protein levels and an cle7–10 could be targeted with CRISPR/Cas9, even resulting in
sustained therapeutic benefits in murine disease models.11
These studies strongly suggest that CRISPR/Cas9 may be
The opinions expressed in this article are not necessarily those of the
editors or of the American Heart Association.
particularly attractive to inactivate mutant alleles that cause
From the Department of Gene Therapy and Regenerative Medicine, a dominant inherited disease, like catecholaminergic poly-
Vrije Universiteit Brussel (VUB), Belgium (T.V., M.K.C.); Center for morphic ventricular tachycardia. Pan et al3 now generated an
Molecular and Vascular Biology, Department of Cardiovascular Sciences, all-in-one AAV9 vector that coexpressed the gRNA targeting
University of Leuven, Belgium (T.V., M.K.C.).
Correspondence to Thierry VandenDriessche, MSc, PhD, Department the mutant Ryr2 allele and a small Cas9 variant (derived from
of Gene Therapy and Regenerative Medicine, Vrije Universiteit Brussel Staphylococcus aureus)4 that could all fit within the same vec-
(VUB), Bldg D, Room D365, Laarbeeklaan 103, B-1090 Brussels, tor backbone. The AAV9-gRNA/saCas9 vector was injected in
Belgium, Email thierry.vandendriessche@vub.ac.be; or Marinee K.
Chuah, Department of Gene Therapy and Regenerative Medicine, Vrije
10-day old mice heterozygous for the RyR2 mutation R176Q
Universiteit Brussel (VUB), Bldg D, Room D365, Laarbeeklaan 103, that mimic catecholaminergic polymorphic ventricular tachy-
B-1090 Brussels, Belgium, Email marinee.chuah@vub.ac.be cardia. This resulted in a specific gene disruption of the
(Circ Res. 2018;123:928-930. pathogenic Ryr2 allele encoding the R176Q mutant protein,
DOI: 10.1161/CIRCRESAHA.118.313876.)
© 2018 American Heart Association, Inc. consistent with the presence of indels at the DNA cleavage
site targeting by the gRNA. Consequently, this resulted in a
Circulation Research is available at https://www.ahajournals.org/
journal/res reduction of the corresponding total Ryr2 mRNA and pro-
DOI: 10.1161/CIRCRESAHA.118.313876 tein levels. Most importantly, this reduction was associated
928
VandenDriessche and Chuah   Getting Into the Rhythm With CRISPR   929

Figure. CRISPR/Cas9-based gene editing of dominant inherited arrhythmia. Catecholaminergic polymorphic ventricular tachycardia (CPVT) is an
autosomally transmitted form of inherited cardiac arrhythmia that is caused by gain-of-function missense mutations in the gene encoding the RYR2 (ryanodine
receptor 2). Mutant dysfunctional RYR2 receptors promote uncontrolled calcium leakage from the sarcoplasmic reticulum into the cytoplasm triggering lethal
Downloaded from http://ahajournals.org by on October 25, 2018

arrhythmia. A heterozygous (R176Q/+) murine model of CPVT had been developed in which 1 Ryr2 allele corresponded to an R176Q gain-of-function mutation,
whereas the other allele was wild-type. To increase the proportion of fully functional wild-type RYR2 channels, the mutant RYR2 monomers were selectively
removed from the multimeric complexes by specific disruption of the dominant mutant Ryr2 allele using CRISPR/Cas9. The wild-type allele was unaffected,
hence favoring the incorporation of wild-type RyR2 monomers into the RYR2 multimeric receptor, at the expense of the mutant RyR2 monomers. The CRISPR/
Cas9 components were delivered to the CPVT Ryr2 R176Q/+ mice using an all-in-one adeno-associated viral 9 vector coexpressing the saCas9 along with a
guide RNA specifically designed to recognize the mutant Ryr2 allele. Consequently, this resulted in a relatively robust phenotypic correction consistent with
prevention of arrhythmia in accordance with the normalization of the corresponding ECG pattern. NHEJ indicates nonhomologous end joining.

with a restoration of normal calcium handling, protecting the by the lack of any detectable off-target effects in nontarget
heterozygous R176Q/+ mice from pacing-induced cardiac genes, enhancing the overall safety of this gene-editing strat-
arrhythmias. egy. Nevertheless, to rule out potential off-target effects, more
To our knowledge, this is the first study demonstrating rel- comprehensive and unbiased genome-wide assays.12This
atively robust phenotypic correction in vivo of inherited car- overcomes the limitations of computational algorithms that
diac arrhythmia using CRISPR/Cas. It is encouraging that the typically rely on a limited set of computationally predicted
targeting efficiency and overall therapeutic effect seem more off-target sites and were therefore not highly predictive.
robust than what had been achieved recently based on RNA Because Cas9 and the Ryr2-specific gRNA are driven
interference.2 However, some caution is warranted because from robust constitutive promoters (ie, CAG and U6 promoter,
no head-to-head comparisons were performed to compare the respectively), it is likely that their expression will be sustained
relative efficacy of shRNA- versus CRISPR/Cas9-based tar- after AAV transduction in cardiomyocytes though this was
geting. It is reassuring that Pan et al3 showed that the gene not tested directly in the Pan et al3 study. However, ideally,
inactivation was specific for the mutant Ryr2 allele, where- transient expression of the CRISPR components may be pre-
as the wild-type allele was unaffected. This is because of ferred as a hit-and-run strategy6 to minimize not only the risk
the gRNA that was specifically designed to target a specific of putative off-target DNA cleavage but also possible inadver-
polymorphism upstream of the Ryr2 mutation that is absent tent immune reactions directed against the Cas9-expressing
in the wild-type locus. Though this approach discriminates cardiomyocytes. In principle, transient expression of the
effectively between wild-type and mutant alleles, it would CRISPR components should suffice to achieve a permanent
need to be specifically adapted and personalized for each pa- modification of the target DNA at the desired locus, obviating
tient individually. Ideally, an one-size-fits-all design may be the need for continuous expression as in the case of shRNA-
preferred taking advantage of the most commonly occurring based approaches. Whether gene editing also occurs in non-
polymorphisms or gain-of-function mutations in the RyR2 cardiac cells that express RyR2, such as smooth muscle cells
gene. Furthermore, the targeting specificity was confirmed and neurons requires further studies. One potential caveat of
930  Circulation Research  September 28, 2018

the experimental design of the study by Pan et al3 is that rela- of the R4496C mutation in the ryanodine receptor gene (RYR2). Circ
Res. 2017;121:525–536. doi: 10.1161/CIRCRESAHA.117.310882
tively high vector doses were required ≥1014 vector genomes
3. Pan X, Philippen L, Lahiri SK, Lee C, Park SH, Word TA, Li N,
per kg to obtain a therapeutic effect. Because the CRISPR/ Jarrett KE, Gupta R, Reynolds JO, Lin J, Bao G, Lagor WR, Wehrens
Cas AAV vector was injected subcutaneously, it may not have XHT. In vivo Ryr2 editing corrects catecholaminergic polymor-
been the ideal route to achieve efficient cardiac transduction phic ventricular tachycardia. Circ Res. 2018;123:953–963. doi:
10.1161/CIRCRESAHA.118.313369
and other intravascular routes or direct intramyocardial ad- 4. Ran FA, Cong L, Yan WX, Scott DA, Gootenberg JS, Kriz AJ, Zetsche
ministration may be preferred. Though such high vector doses B, Shalem O, Wu X, Makarova KS, Koonin EV, Sharp PA, Zhang F.
have also been used in gene therapy trials, it carries a greater In vivo genome editing using Staphylococcus aureus Cas9. Nature.
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to be addressed, the study of Pan et al3 strongly supports the 9. Ishizu T, Higo S, Masumura Y, Kohama Y, Shiba M, Higo T,
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11. El Refaey M, Xu L, Gao Y, Canan BD, Adesanya TMA, Warner
Sources of Fundings SC, Akagi K, Symer DE, Mohler PJ, Ma J, Janssen PML, Han R.
T. VandenDriessche and M.K. Chuah are supported by grants from the In vivo genome editing restores dystrophin expression and car-
Fonds voor Wetenschappelijk Onderzoek (FWO); Koning Boudewijn diac function in dystrophic mice. Circ Res. 2017;121:923–929. doi:
Stichting—Walter Pyleman Fund and Generet Fund; Telethon 10.1161/CIRCRESAHA.117.310996
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VUB/UZ Willy Gepts grant, VUB Strategic Research Program and
JK. CIRCLE-seq: a highly sensitive in vitro screen for genome-wide
Industrieel Onderzoeksfonds, Téléthon Belgique ABMM. CRISPR-Cas9 nuclease off-targets. Nat Methods. 2017;14:607–614. doi:
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Disclosures 13. Nathwani AC, Reiss UM, Tuddenham EG, et al. Long-term safety and
efficacy of factor IX gene therapy in hemophilia B. N Engl J Med.
None.
2014;371:1994–2004. doi: 10.1056/NEJMoa1407309
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mRNA rescues ultrastructural and arrhythmic phenotype in mice carriers repeats ◼ ryanodine ◼ sarcoplasmic reticulum ◼ tachycardia

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