You are on page 1of 6

| |

Received: 29 November 2018    Revised: 6 May 2019    Accepted: 20 May 2019

DOI: 10.1111/efp.12528

ORIGINAL ARTICLE

The first record of Botryodiplodia canker in Poland

Czesław Bartnik1  | Piotr Boroń1  | Jakub Michalcewicz2  | Michał Ciach3

1
Department of Forest Pathology,
Mycology and Tree Physiology, Faculty Abstract
of Forestry, University of Agriculture in This study describes the first observation of Botryodiplodia canker in the Western
Kraków, Kraków, Poland
2 Carpathians in south‐eastern Poland caused by Botryodiplodia hypodermia (Sacc.) Petr.
Department of Forest Protection,
Entomology and Forest Climatology, Faculty (syn. Sphaeropsis hypodermia, S. ulmicola). The canker occurred on an approximately
of Forestry, University of Agriculture in
17‐year‐old Ulmus glabra sapling in a mixed conifer/deciduous stand with elm trees
Kraków, Kraków, Poland
3
Department of Forest Biodiversity, Faculty
severely damaged by Dutch elm disease. This paper describes disease symptoms and
of Forestry, University of Agriculture in provides information on the macro‐ and micromorphology of the fungus isolated from
Kraków, Kraków, Poland
the cankered tissues. The results of BLAST search using DNA sequences obtained for
Correspondence our cultures and subsequent phylogenetic positioning of the fungus among closely
Piotr Boroń, Department of Forest
Pathology, Mycology and Tree Physiology,
related Botryosphaeriaceae indicate that the species is much more closely related to
Faculty of Forestry, University of Agriculture Phaeobotryon than to the other Botryodiplodia or Sphaeropsis species. Moreover, a
in Kraków, al. 29 Listopada 46, 31 – 425
Kraków, Poland.
total of 16 polymorphisms within the ITS region were detected between S. ulmicola
Email: p.boron@ur.krakow.pl associated with Botryodiplodia canker in North America and B. hypodermia associated

Funding information
with the canker observed in Poland. Thus, the “European” variant of “Sphaeropsis”
Ministry of Science and Higher Education of ulmicola can now be easily identified with our barcode sequences. The Botryodiplodia
The Republic of Poland; statutory research
mechanism; Faculty of Forestry; University
canker is much less prevalent in Europe than in North America. Differences in viru‐
of Agriculture in Cracow under the research, lence of “American” and “European” linages and differences in susceptibility of vari‐
Grant/Award Number: DS 3414
ous elm species may be the reason for the higher prevalence of the disease in North
Editor: Thomas Sieber America.

KEYWORDS
Botryodiplodia ulmicola, Botryosphaeriaceae, elm canker, Sphaeropsis ulmicola, Ulmus, wych elm

1 |  I NTRO D U C TI O N According to Riffle (1981), the bark tissue infected with B. hy‐
podermia turns reddish brown to brownish black and becomes
The two most devastating diseases affecting elms worldwide are elm water‐soaked and very soft. The lesion edge is marked by a distinct
yellows caused by elm phlöem necrosis mycoplasm and Dutch elm dis‐ demarcation line between living and necrotic bark tissue. The cam‐
ease caused by Ophiostoma ulmi and O. novo‐ulmi (Boudon‐Padieu bial and sapwood tissues directly beneath infected bark become
et al., 2004; Harwood, Tomlinson, Potter, & Knight, 2010; Thomas, reddish brown. Normally, this discoloration extends to the demar‐
Stone, & La Porta, 2018; Webber, 2014). Elms may suffer also from cation line. Above the cankers, foliage becomes chlorotic, wilts and
a number of cankers occurring on stems and/or on twigs. These are, dies. Eventually, the entire section of the stem distal to the girdling
among others, caused by fungi of the Nectria, Neonectria, Diothiorella, canker dies. Pycnidia develop in patches of dying and dead bark tis‐
Cytospora, Phomopsis genera and fungal‐like Phytophthora. The list sue near canker margins, usually in autumn. Bark wounds are the
of elm diseases in Poland is far from complete (Mańka, 2005). This entry points for natural infections by other pathogens. Cankers re‐
paper describes a new addition to this list: the Botryodiplodia canker sulting from infections during the peak of growing season usually
caused by Botryodiplodia hypodermia (syn. Sphaeropsis hypodermia, develop rapidly due to the increased demand for water. Early spring,
S. ulmicola), identified for the first time on Ulmus glabra in Poland. late autumn and winter infections are usually less severe creating

Forest Pathology. 2019;00:e12528. wileyonlinelibrary.com/journal/efp © 2019 Blackwell Verlag GmbH  |  1 of 6


https://doi.org/10.1111/efp.12528
|
2 of 6       BARTNIK et al.

small cankers that are callused over during the following growing substrate, representative isolates were inoculated on sterilized frag‐
season (Riffle, 1978). ments of wych elm twigs (⌀ ca. 1 cm, 10 cm long). A portion of my‐
The Botryodiplodia canker was detected in the study site of the celium‐overgrown PDA + T medium was placed in a notch made on a
endangered rosalia longicorn (Rosalia alpina) located in the Dutch twig fragment with a sterile scalpel and incubated in Erlenmeyer flask
elm disease‐affected elm stands in the Beskid Niski Mts (Western covered with cotton wool plug at room temperature. Observations
Carpathians, SE Poland). Multiple pathogens were detected in the of both culture development and growth of fungi on elm wood were
studied stands (Bartnik, Michalcewicz, & Ciach, 2015), but a single carried out for 6 months. All microstructure observations and mea‐
tree harboured a characteristic perennial canker reminiscent of a surements were made with either Zeiss Discovery Stereomicroscope
Botryodiplodia canker. This paper presents a detailed description of or Zeiss Axiophot light microscope using differential interference
the disease symptoms and a morphological and molecular character‐ contrast.
ization of cultures isolated from this canker. Mycelium from individual cultures (⌀ ca. 2 cm) and a culture of
CBS strain 174.63 of B. hypodermia were collected with a sterile scal‐
pel, placed in 2‐ml microcentrifuge tubes with three stainless steel
2 |  M ATE R I A L A N D M E TH O DS beads and ca. 0.2 cm3 of bleach‐washed sand and homogenized in a
Retsch MM 200 oscillation mill (Retsch) for 5 min at 25 Hz. Next, a
The study was conducted in 2014 in Beskid Niski Mts (Western modified CTAB method (Gawel & Jarret, 1991) was used to extract
Carpathians) in a ca. 70‐year‐old mixed beech/elm‐dominated stand the total genomic DNA from the homogenized mycelium samples.
(Dentario glandulosae‐Fagetum:30% wych elm, 30% European beech Resulting DNA precipitates were re‐suspended in 50 μl of nuclease‐
Fagus sylvatica and 10% for each of sycamore maple Acer pseudo‐ free water. 100‐fold diluted (20–100 ng/μl) DNA extracts were used
platanus, common ash Fraxinus excelsior, silver fir Abies alba and as templates in PCR amplifications.
Scots pine Pinus sylvestris) (Bartnik et al., 2015). The wych elm trees In this study, we amplified four barcode DNA regions for a sin‐
were heavily weakened by Dutch elm disease or already dead, and gle representative isolate acquired from cankered wood and for CBS
a number of dead elm trees were removed from the stand what was strain 174.63: the ITS region with primers ITS1F (Gardes & Bruns,
evidenced by numerous stumps and confirmed by the forest service. 1993) and ITS4 (White, Bruns, Lee, & Taylor, 1990), the IGS re‐
The history of the stand is not well defined. While European beech gion with primers IGS‐12a and NS1R (Carbone & Kohn, 1999), an
and silver fir occurred mostly due to natural regeneration, other actin gene fragment (ACT) with primers ACT‐512F and ACT_783R
species were planted according to management plans. The origin of (Carbone & Kohn, 1999) and a calmodulin gene fragment (CAL) with
wych elms seedlings is not known, and they could either come from primers CAL‐228F and CAL‐778R (Carbone & Kohn, 1999). All tar‐
seeds collected locally or be traded from regional tree nurseries. get sequences were amplified in a total volume of 50 μl using the
A single wych elm tree with Botryodiplodia‐like canker was ob‐ same reaction mixture and cycling conditions. Reaction mixtures
served on one of the Rosalia longicorn study sites in the vicinity of contained: 1× DreamTaq Green buffer (Thermo Fisher Scientific),
Myscowa village (on the Łysa Góra mountain), Dukla Forest District, 4.5 mM MgCl2, 0.12 mM of each dNTPs, 0.08 μM of each primer
southern Poland (49°33′0.00′′N; 21°33′30.00′′E). It occurred on an and 1 U of DreamTaq DNA polymerase (Thermo Fisher Scientific).
approximately 17‐year‐old sapling showing decline symptoms with All amplifications were run in a T100 Thermal Cycler (Bio‐Rad) pro‐
the most apparent decreased twig growth resulting in a small num‐ grammed for 5 min of initial denaturation at 94°C, 25 touchdown
ber of branches. The most probable cause for these symptoms was cycles of 30 s at 94°C, 30 s at decreasing annealing temperatures
the perennial canker girdling approximately half of stem circumfer‐ (0.5°/cycle from 67.5°C in the 1st to 55°C in the 25th cycle), 1 min at
ence. No readily visible bark beetle galleries were noticed on the 72°C and 20 cycles with 30 s at 94°C, 30 s at 55°C and 1 min at 72°C
studied tree nor Dutch elm disease characteristic xylem discolor‐ followed by 10 min at 72°C of final extension. PCR effectiveness
ation of the last growth ring. The trunk section with the canker was was verified in agarose gel, and positive amplification products were
dissected and transported to the laboratory for detailed examination purified with a Clean‐Up DNA Purification Kit (A&A Biotechnology).
of the symptoms. Fungal isolations were carried out within 48 hr. All target fragments were sequenced in both directions using PCR
Twelve wood fragments (ca. 5 × 5 × 1 mm) were excised from the primers with reagents of BigDye Terminator v3.1 Cycle Sequencing
vicinity of the canker under sterile conditions and placed on Petri Kit (Life Technologies) and T100 thermal cycler, and 3,500 Series
dishes containing PDA + T medium (potato dextrose agar, 200 mg/L Genetic Analyser (Life Technologies) was used to detect sequencing
tetracycline). All wood fragments were dissected directly from black results.
or blue‐black smudges visible on the cross‐section of the trunk, ca. Sequences were processed with ChromasPro 1.6 software
1.5–2.0 cm from the trunk edge and ca. 13 cm below the edge of the (Thechnelysium) and queried against the NCBI GenBank database
canker. Petri dishes were incubated at room temperature for 7 days with the BLAST search tool to retrieve the most similar sequences. As
in the dark. Initially, the acquired isolates were identified morpho‐ BLAST search produced inconclusive results, we decided to employ
logically and Botryodiplodia‐like cultures were subjected to detailed phylogenetic approach to rectify further the species identification
observations for a period of 6 months, followed by sequence‐based of our isolates. Apart from our sequences, the phylogenetic analysis
identification. To confirm the ability of cultures to grow on woody included species of Alanphillipsia, Barriopsis, Diplodia, Lasiodiplodia,
BARTNIK et al. |
      3 of 6

Phaeobotryon and Sphaeropsis. Sequences of Aplosporella hesperidica (a) (b)


and Septorioides pini‐thumbergii were included as an outgroup. The
complete list of species used with corresponding GenBank accession
numbers is presented in Table S1.
The phylogenetic analysis employed three DNA fragments: the
ITS region, partial sequence of 28S rRNA gene (LSU) and partial se‐
quence of the translation elongation factor 1α (TEF1). Sequences for
all three regions were aligned independently with MAFFT v 7 (Katoh,
Rozewicki, & Yamada, 2017) and refined manually. The resulting ITS
and TEF1 alignments contained highly variable regions and/or com‐
plex overlapping gaps that could not be aligned with high confidence. (c)
These regions were deleted from both, ITS and TEF1 alignments,
prior to the analysis. The pattern of gaps in ITS alignment observed
among our isolate and most similar taxa (B. hypodermia/S. ulmicola
and Phaeobotryon sequences) proved to be much clearer. Gap (indel)
pattern for these taxa was encoded as a present/absent binary ma‐
trix with FastGap 1.2 (Borchsenius, 2009). For the rest of taxa, the
gap regions in ITS alignments were treated as missing data. Thus, our
analysis included three sequence alignments: ITS, LSU and TEF1 and F I G U R E 1   Botryodiplodia canker on a stem of wych elm (a),
the gap matrix for ITS sequences that were analysed jointly in a single Botryodiplodia hypodermia culture on PDA + T after 1‐month
incubation at room temperature and ca. 1‐year storage at 4°C (b),
run as separate data partitions. All three alignments were tested for
conidium of B. hypodermia (c)
the best‐suited substitution models with jModelTest 2.1.5 (Darriba,
Taboada, Doallo, & Posada, 2012) limiting the number of substitu‐
tion shames to three to allow only evolutionary models implemented All wood fragments used for fungal isolation and a CBS strain
in MrBayes 3.1.2. According to Bayesian information criterion, the 174.63 of B. hypodermia initiated growth of identical fast growing,
best evolutionary models were as follows: K2P + G (ITS), K2P + I+G blue‐black, woolly cultures. The representative culture was depos‐
(LSU) and HKY + G (Tef1). MrBayes (Huelsenbeck & Ronquist, 2001), ited in CBS KNAW culture collection. The same type of mycelium
a Bayesian inference dedicated program, enables to analyse jointly was observed on the surface of inoculated twig fragments. After
sequence and binary data using Markov chain Monte Carlo (MCMC) 3 months, multiple black spherical pycnidia, ⌀ ca. 80 µm, occurred
methods to estimate both the phylogeny itself and posterior proba‐ both, in cultures and on the bark of the inoculated twig sections.
bility support of clades. The program settings were as follows: two When crushed in a droplet of water on microscope slide, the pycnidia
independent runs with four MCMC chains each (three heated and released unicellular conidia, 25.0‐30.0 μm × 14.0‐18.0 μm, on aver‐
one cold), temperature of cold chain: 0.2, burn‐in fraction: 0.25, sam‐ age 28.2 μm × 15.6 μm. The numbers of the released conidia were,
pling frequency: every 100th tree from both runs. The analysis was however, very small.
run until the standard deviation of split frequencies stop‐value of All four barcode sequences, ITS, IGS, ACT and CAL, of the rep‐
0.01 was reached. After the analysis, a 50% majority condensed tree resentative isolate from the wood fragment were successfully am‐
was generated and visualized in the MEGA 6.06 (Tamura, Stecher, plified and sequenced (GenBank accession numbers: MK134682 for
Peterson, Filipski, & Kumar, 2013) tree‐drawing tool. All alignments ITS, MK134684 for ACT, MK134686 for CAL and MK134688 for
and matrixes used in the analysis, as well as the resulting tree, were IGS). The sequences of all four barcode regions were 100% iden‐
deposited in TreeBASE phylogenetic data repository, available under tical with those of CBS strain 174.63 of B. hypodermia (GenBank
the accession URL: http://purl.org/phylo/​treeb​ase/phylo​ws/study/​ accession numbers for the CBS strain 174.63 are: MK134681 for
TB2:S23569. ITS, MK134683 for ACT, MK134685 for CAL and MK134687 for
IGS). Blast search for the ITS region resulted in 99.8% match (sin‐
gle polymorphism per 530‐bp‐long ITS region) with two acces‐
3 | R E S U LT S sions: KF800390, an environmental dust sample collected from
indoor air in Kansas City, Missouri, USA (Rittenour et al., 2014), and
The observed Botryodiplodia canker was 6.5  cm long and 5.0  cm KX464232—a sequence deposited as Phaeobotryon sp., culture col‐
wide, and it occurred on the 5.2‐cm‐wide stem that widened to lection strain CBS: 123.30 isolated originally in Massachusetts, USA
6.0 cm at the canker opening (Figure 1). A distinct layer of the callus (Yang et al., 2017). The closest accession submitted with the species
tissue formed at the rim of the opening surrounding the area of grey‐ name, 97.4% similarity, was AF243398—S. ulmicola (Zhou & Stanosz,
coloured dead wood. A gallery of a xylophagous insects (probably 2001). The three remaining barcode sequences of the isolate pro‐
Cossus cossus, Lepidoptera, Cossidae) occurred directly on the edge duced no significant match in the BLAST analysis, that is, the similar‐
of the canker. ity score was <90%.
|
4 of 6       BARTNIK et al.

Phaeobotryon mamane CBS 122980


100
Phaeobotryon mamane CPC 12442
55 Phaeobotryon mamane CPC 12264
Phaeobotryon cupressi CBS 124700
72
100 Phaeobotryon cupressi CBS 124701

Phaeobotryon negundinis MFLUCC 15-0436


95 Phaeobotryon negundinis CAA799
Phaeobotryon
Phaeobotryon sp. NEFU817
85
Phaeobotryon sp. JC-2017a
Phaeobotryon sp. LJR0320
99
Phaeobotryon rhois CFCC 89662
96 Phaeobotryon rhois CFCC 89663
Phaeobotryon sp. 177
ʻPhaeobotryonʼ sp. CBS 123.30
Uncultured air sample CMH299
83
96
ʻSphaeropsisʼ ulmicola 94-13 Botryodiplodia hypodermia
Botryodiplodia hypodermia
Botryodiplodia hypodermia CBS 174.63
100 Bariopsis fusca CBS 174.26
Bariopsis tectonae CBS 137786
99 Bariopsis iraniana MFLUCC 14-1190 Bariopsis
99 Bariopsis iraniana CBS 124698
100 Bariopsis iraniana CBS 124699
Alanphillipsia aloes CPC 21298
Alanphillipsia
100
Alanphillipsia aloeigena CBS 136408
Oblongocollomyces variabilis CBS 121775
100
Oblongocollomyces variabilis CMW 25423
100 Oblongocollomyces variabilis CBS 121774 Oblongocollomyces
Oblongocollomyces variabilis CBS 121776
Sphaeropsis euc ola MFLUCC 11-0579
100
Sphaeropsis euc ola MFLUCC13-0701
70 Sphaeropsis euc ola MFLUCC 11-0654
Sphaeropsis citrigena ICMP 16812
98 Sphaeropsis citrigena ICMP 16818

82 99 Sphaeropsis porosa CBS 110496 Sphaeropsis


Sphaeropsis porosa STE-U 5046
Sphaeropsis visci CBS 186.97
89
Sphaeropsis visci CBS 122527
99 Sphaeropsis visci CBS 100163

Sphaeropsis visci CBS 122526


Diplodia CBS 302.36
Diplodia CJK1
97
Diplodia CBS 112553
Diplodia pyri CBS 121862
82
Diplodia sp. CBS 125.37
Diplodia agrifolia CBS 132777
98 100 Diplodia agrifolia CBS 132841
90 Diplodia agrifolia CBS 124.30

Diplodia africana CBS 120835


Diplodia olivarum CBS 121887
81
Diplodia rosulata CBS 116472
100 Diplodia rosulata CBS 116470

Diplodia sp. CBS 139667


Diplodia
85
68 Diplodia allocellula CBS 130408
94 Diplodia citricarpa CBS 124715
98
Diplodia intermedia CBS 124134
81
Diplodia sapinea CBS 109726
99 Diplodia sapinea CBS 109727
96 58 Diplodia sapinea CBS 109725

Diplodia tsugae CBS418.64


99 Diplodia cupressi CBS 261.85
100 Diplodia cupressi CBS 168.87

Diplodia c ola CBS 112076


95
Diplodia sp. CBS 533.87
100
Diplodia gallae CBS 212.25
99
Diplodia gallae CBS 211.25
Lasiodiplodia pseudotheobromae CBS 374.54
100 Lasiodiplodia pseudotheobromae CBS 116459 Lasiodiplodia
100 Aplosporella hesperidica CBS 732.79

100
Aplosporella hesperidica CBS 208.37 Outgroup
Septorioides pini-thunbergii CBS 473.91
×3

0.05

F I G U R E 2   Phylogenetic positioning of Botryodiplodia hypodermia among related Botryosphaeriaceae genera based on the sequences of
ITS, LSU and TEF1 regions: 50% majority tree generated by combining 31,142 trees sampled in 1,557,000 iterations of Bayesian inference.
Posterior probability support values for each clade are indicated at the nodes, and scale bar indicates 0.05 estimated substitutions per site.
The list of taxa in the tree with GenBank accession numbers for particular sequences is provided in Table S1
BARTNIK et al. |
      5 of 6

The ITS sequences mentioned above were used in Bayesian “uncultured environmental sample,” that is, without the species name
phylogenetic reconstruction, and the resulting tree is presented and/or disease symptoms description. Thus, except for the sequence,
in Figure 2. The main feature of this tree is that all included gen‐ no other comparisons with our fungus were possible. Another strain
era: Alanphillipsia, Barriopsis, Diplodia, Lasiodiplodia, Phaeobotryon with a highly similar ITS sequence was strain CBS 123.30, originally
and Sphaeropsis, form well‐defined monophyletic clades. The same deposited as Botryosphaeria stevensii/Diplodia mutila. However, this
is true for the B. hypodermia clade that included sequences for: name cannot be correct as the similarity of ITS sequences between
Phaeobotryon sp. CBS 123.30, S. ulmicola isolate 94–13, B. hypo‐ this strain and the D. mutila type culture (NR_144906) is only 93%.
dermia CBS 174.63, an uncultured air sample clone CMH299, and The GenBank accession for the CBS 123.30 strain was made by Yang
our isolate. This clade was directly grouped, with high support, with et al. (2017) as Phaeobotryon sp., who used this name based on the
Phaeobotryon clade as its sister group. results of their phylogenetic analysis: the species was in a sister po‐
sition to all Phaeobotryon species in their phylogenetic tree. No cul‐
tures of B. hypodermia/S. ulmicola were, however, included in their
4 | D I S CU S S I O N analysis. The same arrangement, that is, the position of B. hypoder‐
mia clade (instead of a single sequence) at the base of Phaeobotryon
The high level of damage to elm trees resulting from B. hypoder‐ clade, was reproduced in our phylogeny. This obviously puts B. hypo‐
mia (syn. S. hypodermia, S. ulmicola) infections has been primarily dermia/S. ulmicola lineage outside Sphaeropsis clade and proves that
reported from North America (Krupinsky & Cunningham, 1993; its classification within the genus Sphaeropsis is incorrect.
Riffle, 1978, 1981). According to the Fungal Database provided by The level of difference between the Phaeobotryon and B. hypo‐
Farr and Rossman (2018), the range of this pathogen covers North dermia clades is substantial, it amounted to 25 polymorphic sites
America. This record was obviously not complete as at least one cul‐ between the two most similar representatives of both clades in the
ture from 1963 of B. hypodermia from Helsinki, Finland, is available in ITS region only. The discussion whether or not it constitutes suffi‐
CBS KNAW culture collection. Another culture of the species prob‐ cient divergence to justify describing a new genus to accommodate
ably from Europe was deposited in the CBS collection, but without B. hypodermia/S. ulmicola linage or transferring it to Phaeobotryon as
specified location. The literature lacks, however, any report of the Yang et al. (2017) did, far exceeds the scope of this short report and
Botryodiplodia canker either in Poland or in the whole range of wych deserves much more attention in another study involving detailed
elm in Europe. morphological and molecular examination of all available cultures.
The canker morphology generally followed the descriptions in Another problem to investigate in a more detailed study is the diver‐
the literature (Riffle, 1978, 1981). The significant difference of our gence within the B. hypodermia clade itself. The group is comprised
specimen was its close association with the feeding gallery of a of at least two lineages separated by minimum 16 polymorphic sites
xylophagous insect. It is, however, impossible to determine based within the ITS region. The first is “Sphaeropsis” ulmicola represented
on the specimen whether the damage made by the insect was the by an isolate acquired by Zhou and Stanosz (2001). It is recognized
starting point for the fungal infection or the insect used the canker as the cause of Botryodiplodia canker of elms in North America and
opening to start a gallery. No symptoms of Dutch elm disease, that most probably reported and/or studied by (Farr & Rossman, 2018;
is, brown xylem discoloration in the last growth ring, were present Krupinsky & Cunningham, 1993; Riffle, 1978, 1981). Strains CBS
on the studied tree at the canker level. We observed instead black 174.63, CBS 123.30, uncultured spore picked by Rittenour et al.
or blue‐black irregularly shaped smudges in the sapwood (no heart‐ (2014) and our isolates represent the second lineage occurring both
wood formed yet) visible on the cross‐section of the trunk. A direct in Europe and in North America.
connection between Dutch elm disease and the occurrence of the Despite the controversy regarding the correct name for the
Botryodiplodia canker is therefore unlikely. However, the ubiquitous causal fungus, the fact remains that Botryodiplodia canker was de‐
prevalence of Dutch elm disease in the stand certainly lowered the tected for the first time in Poland. Without proper survey, it is im‐
vigour of many trees, leading to increased susceptibility to second‐ possible to determine the prevalence of this disease but it appears to
ary pathogens such as the canker disease described here. be rare, only a single specimen was identified throughout the entire
Despite the fact that the canker specimen was relatively old (with stand. North American reports (Krupinsky & Cunningham, 1993;
weathered wood surface and well‐developed callus rim), it harboured Riffle, 1978) suggest that in proper conditions Botryodiplodia canker
a viable fungus that could be easily isolated using standard media. caused by “Sphaeropsis” ulmicola has the potential to severely dam‐
It took approximately 3 months for cultures to sporulate both on age elm stands. No such situation was observed in our case. One of
PDA + T and on sterilized twig. The sizes of both pycnidia and conidia the reasons for this difference may be the masking effect of Dutch
fall well within the range reported for B. hypodermia (Ellis & Everhart, elm disease, whose prevalence is much more widespread and dis‐
1891, 1903; Saccardo, 1892). The sequence‐based identification of ease symptoms more pronounced. Another reason may be the dif‐
the isolates was, however, somewhat problematic. Two very similar ference in pathogenicity of the “European” lineage of “Sphaeropsis”
ITS sequences were identified in BLAST search, both originating from ulmicola and/or lower susceptibility of wych elm. The study aiming to
North America. The first was the ITS region cloned from an airborne investigate these factors is currently under way, and the results will
spore collected as a dust sample. This sequence was submitted as be described in the follow‐up paper.
|
6 of 6       BARTNIK et al.

AC K N OW L E D G E M E N T S Katoh, K., Rozewicki, J., & Yamada, K. D. (2017). MAFFT online service:
multiple sequence alignment, interactive sequence choice and vi‐
This research was financed by the Ministry of Science and Higher sualization. Briefings in Bioinformatics, https​://doi.org/10.1093/bib/
Education of The Republic of Poland, statutory research mechanism, bbx108
Krupinsky, J. M., & Cunningham, R. A. (1993). Response of Siberian elm
Faculty of Forestry, University of Agriculture in Cracow under the
to inoculations with Sphaeropsis ulmicola. Plant Disease, 77, 678–681.
research topic No. DS 3414. We would like to thank prof. Tadeusz
Mańka, K. (2005). Fitopatologia leśna, 6th ed. Warszawa, Poland:
Kowalski for his help with microscopic measurements. Pańństwowe Wydawnictwo Rolnicze i Leśne.
Riffle, J. W. (1978). Development of Canker on Ulmus pumila Related to
Month of Inoculation with Botryodiplodia hypodermia. Phytopathology,
ORCID 68, 1115–1119. https​://doi.org/10.1094/Phyto-68-1115
Riffle, J. W. (1981). Cankers. In R. J. Stipes, & R. J. Campana (Eds.),
Czesław Bartnik  https://orcid.org/0000-0002-1095-4727 Compendium of elm diseases (pp. 34–42). St. Paul, MN: Amer
Piotr Boroń  https://orcid.org/0000-0002-8581-6759 Phytopathological Society.
Rittenour, W. R., Ciaccio, C. E., Barnes, C. S., Kashon, M. L., Lemons, A.
Jakub Michalcewicz  https://orcid.org/0000-0001-6489-8735 R., Beezhold, D. H., & Green, B. J. (2014). Internal transcribed spacer
rRNA gene sequencing analysis of fungal diversity in Kansas City in‐
Michał Ciach  https://orcid.org/0000-0002-5619-9747
door environments. Environmental Science. Processes & Impacts, 16(1),
33–43. https​://doi.org/10.1039/c3em0​0 441d​
Saccardo, P. A. (1892). Sylloge fungorum omnium hucusque cognitorum,
REFERENCES 10th ed. Padua, Italy: Patavii Sumptibus auctoris. Retrieved from
https​://www.biodi​versi​t ylib​rary.org/item/25465​.
Bartnik, C., Michalcewicz, J., & Ciach, M. (2015). Dutch elm disease and
Tamura, K., Stecher, G., Peterson, D., Filipski, A., & Kumar, S. (2013).
the habitat of endangered Rosalia longicorn Rosalia alpina (L.): A con‐
MEGA6: Molecular evolutionary genetics analysis version 6.0.
servation paradox? Polish Journal of Ecology, 63(3), 440–447. https​://
Molecular Biology and Evolution, 30(12), 2725–2729. https​://doi.
doi.org/10.3161/15052​249PJ​E2015.63.3.013
org/10.1093/molbe​v/mst197
Borchsenius, F. (2009). FastGap 1.2. Aarhus, Denmark: Department of
Thomas, P. A., Stone, D., & La Porta, N. (2018). Biological flora of the
Biosciences, Aarhus University. Retrieved from http://www.aubot.
British isles: Ulmus glabra. Journal of Ecology, 106(4), 1724–1766.
dk/FastG​ap_home.htm. November 30, 2017.
https​://doi.org/10.1111/1365-2745.12994​
Boudon‐Padieu, E., Larrue, J., Clair, D., Hourdel, J., Jeanneau, A., Sforza,
Webber, J. (2014). Elm yellows pest risk analysis. Farnham, UK: Forest
R., & Collin, E. (2004). Detection and prophylaxis of elm yellows
Research, Forestry Commission UK.
phytoplasma in France. Investigación Agraria. Sistemas Y Recursos
White, T. J., Bruns, T., Lee, S., & Taylor, J. (1990). Amplification and di‐
Forestales, 13(1), 71–80.
rect sequencing of fungal ribosomal RNA genes for phylogenetics.
Carbone, I., & Kohn, L. M. (1999). A method for designing primer sets
In M. A. Innis, D. H. Gelfand, J. J. & W. T. J. Sninsky (Eds.), PCR pro‐
for speciation studies in filamentous ascomycetes. Mycologia, 91,
tocols: A guide to methods and applications (pp. 315–322). New York,
553–556. https​://doi.org/10.2307/3761358
NY: Academic Press. Retrieved from https​ ://doi.org/https​
://doi.
Darriba, D., Taboada, G. L., Doallo, R., & Posada, D. (2012). jModelTest
org/10.1016/B978-0-12-372180-8.50042-1.
2: More models, new heuristics and high‐performance computing.
Yang, T., Cheewangkoon, R., Jami, F., Abdollahzadeh, J., Lombard, L.,
Nature Methods, 9(8), 772. https​://doi.org/10.1038/nmeth.2109
Groenewald, J. Z., … Crous, P. W. (2017). Families, genera, and spe‐
Ellis, J. B., & Everhart, B. M. (1891). New species of fungi from various lo‐
cies of Botryosphaeriales. Fungal Biology, 121(4), 322–346. https​://
calities. Proceedings of the Academy of Natural Sciences of Philadelphia,
doi.org/10.1016/J.FUNBIO.2016.11.001
43(1), 76–93.
Zhou, S., & Stanosz, G. R. (2001). Relationships among Botryosphaeria
Ellis, J. B., & Everhart, B. M. (1903). New species of fungi from various
Species and Associated Anamorphic Fungi Inferred from the
localities. Journal of Mycology, 9, 164–168.
Analyses of ITS and 5.8S rDNA Sequences. Mycologia, 93(3), 516.
Farr, D. F., Rossman, A. Y. (2018). Fungal Databases, U.S. National Fungus
https​://doi.org/10.2307/3761737
Collections, ARS, USDA. Retrieved from https​ ://nt.ars-grin.gov/
funga​ldata​bases/​. October 15, 2018.
Gardes, M., & Bruns, T. D. (1993). ITS primers with enhanced specificity
S U P P O R T I N G I N FO R M AT I O N
for basidiomycetes–application to the identification of mycorrhizae
and rusts. Molecular Ecology, 2(2), 113–118. https​://doi.org/10.1111/ Additional supporting information may be found online in the
j.1365-294X.1993.tb000​05.x
Supporting Information section at the end of the article. 
Gawel, N., & Jarret, R. L. (1991). Cytoplasmic genetic diversity in bananas
and plantains. Euphytica, 52(1), 9–23.
Harwood, T. D., Tomlinson, I., Potter, C. A., & Knight, J. D. (2010).
Dutch elm disease revisited: Past, present and future manage‐ How to cite this article: Bartnik C, Boroń P, Michalcewicz J,
ment in Great Britain. Plant Pathology, 60(3), 545–555. https​://doi. Ciach M. The first record of Botryodiplodia canker in Poland.
org/10.1111/j.1365-3059.2010.02391.x
For Path. 2019;00:e12528. https​://doi.org/10.1111/efp.12528​
Huelsenbeck, J. P., & Ronquist, F. (2001). MRBAYES: Bayesian inference
of phylogenetic trees. Bioinformatics, 17(8), 754–755. https​://doi.
org/10.1093/bioin​forma​tics/17.8.754

You might also like