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Benefits of a Two-Compartment Anaerobic Digester of Cattle Manure and how it will Mitigate
Climate Change in Canada
Linda Nagelhout
TABLE OF CONTENTS
PART I: PRODUCT DESCRIPTION AND BENEFITS…………………………………………3
A. Introduction
B. Anaerobic Digestion of Cattle Manure
C. The Process of Anaerobic Digestion in a Two-Phase Reactor
D. Need for Anaerobic Digesters in Canada
E. Anaerobic Digesters for Mitigating Climate Change and Benefits to Canada
F. Canadian Companies Manufacturing Anaerobic Digesters
A. Recommendations
B. Conclusions
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Introduction
As climate change continues to become a more pressing issue with each year that goes
by, the need to find solutions which will help to mitigate climate change are becoming
imperative, especially within the agricultural industry. Studies show that the livestock sector
alone accounts for approximately 5 to 10% of the overall contribution to climate change (Lovett,
1997). This is a result of animal waste which produces greenhouse gases such as methane and
carbon dioxide that trap heat warming the earth’s atmosphere (Aydinalp and Cresser, 2008). Yet,
the goods and products developed as a result of the livestock sector are essential in feeding the
world’s growing population as well as accounting for about 8% of Canada’s gross domestic
product (Statistics Canada, 2017). For these reasons, a two-compartment anaerobic digester for
cattle manure has been developed as a way of capturing greenhouse gases and overall mitigating
climate change.
The process of anaerobic digestion includes microbes in the absence of oxygen which
degrade organic material such as cattle manure and produce biogas which is mainly composed of
methane and carbon dioxide. These gases can then be converted into a source of energy such as
heat or electricity (Holly et al., 2017). The process involves cattle manure being fed into the first
of two reactors where it will then undergo a series of 4 successive stages: hydrolysis,
acidogenesis, acetogenesis and methanogenesis (Meegoda et al., 2018). Since the acidogenic and
methanogenic bacteria experience optimal growth under different temperatures, the concept of
two-phase anaerobic digestion was proposed in the 1970’s. Contrary to the traditional single-
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phase process of anaerobic digestion, the two-phase process would be able to achieve a higher
efficiency in terms of methane production and stability of the overall process. This is because the
temperature of the reactors plays a major role in successful interactions between the microbial
groups as well as impacting the growth and metabolism of the bacteria (Wang et al., 2019).
In the first reactor, acid-forming bacteria convert complex materials such as fats, proteins
and carbohydrates from the manure (slurry) to organic fatty acids mainly composed acetic and
propionic acids through the process of hydrolysis and fermentation. These products are then
transferred to the second reactor to be further processed. In the second phase, methane and other
gaseous end products are formed by “methane-forming” bacteria which get collected (Persson et
al., 2016). Figure 1 below shows the two-phase process of anaerobic digestion. Finally, after a
certain retention period, the remaining products in the form of a nutrient-rich slurry are removed
from the digester and can be used as fertilizer of made into dry-compost bedding for the cattle
(EPA, 2017).
Figure 1. Input materials and products over the course of two-phase anaerobic digestion
(McCarty, 1964).
As of 2018, Canada had a dairy cow and heifer population of approximately 1.5 million
distributed across almost 11 000 farms. Figure 2 below shows the number of dairy cows and
heifers in each province of Canada. The majority of dairy farms can be found in Quebec and
Ontario which are the two biggest dairy producing provinces in Canada and house approximately
976 000 dairy cows and heifers (Government of Canada, 2019). Thus, the implementation of
anaerobic digesters for cattle manure would be most beneficial in these two regions. The current
method for storing cattle manure include lagoons and pits underneath of the barns which provide
oxygen-free environments allowing the ferment and produce greenhouse gases such as methane
and carbon dioxide (EPA, 2017). One study which collected samples of methane production over
a 24-hour period beneath slatted floors of dairy barns determined the rate to be 0.011kg CH₄/kg
volatile solids (VS) (Petersen et al., 2016). Thus, if the average dairy cow produces 62 kg of
manure per day, 0.682 kg of CH₄ are being released into the atmosphere each day per cow as a
Figure 2. This map shows the number of farms, dairy cows and dairy heifers in each province of
Canada (Government of Canada, 2019).
Implementing anaerobic digesters in Quebec and Ontario which have the highest dairy
cow populations in Canada would be an effective strategy for mitigating climate change because
it would capture the biogases produced and convert them into a source of energy instead of
allowing them to be released into the atmosphere. On a 500-cow dairy farm, this would reduce
emissions by almost 125 000 kg of methane per year, which does not yet factor in the levels of
carbon dioxide also released. Because the anaerobic digester captures the biogases released, it is
Furthermore, the nutrient-rich digestate removed from the digester can be used as a
fertilizer and applied to fields improving soil health (EPA, 2017). This is important because with
the extreme weather events as a result of climate change, the soil needs to be able to continue to
sustain crops which rely on healthy soil. Some benefits of applying the digestate include
increasing the soil’s ability to retain water, raising the organic matter content and reducing the
When considering the design of the digester, its structure should be composed as to
minimize heat loss, allow for easy flow of manure through the system, be as automated as
possible and allow for easy access for maintenance and repair. Furthermore, the materials used
should be able to withstand corrosion, as they are consistently in contact with the manure and
biogases produced. The size and design of the digester will be based off of Penn State
University’s vertical double chamber type, a two-phase system which will reflect the topics
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discussed in this report. The complete design of the digester including the manure preparation
area and the effluent storage pit can be seen below in figure 3.
Figure 3. The design of Penn State University’s two-phase digester system (Persson et al., 2016).
The size of this digester which is appropriate for a 100-cow operation and has a retention
time of 14 days and is 4.8 m high with a diameter of 6 m (Homan et al., 2016).. These
dimensions result in a capacity of 100 m3 of manure to be processed with enough room for
biogas collection above the manure. The roof is independent of the tank and is made out of
galvanized steel which allows for flotation depending on the pressure of the gas. It also has the
capacity to store the gas produced over a 6-hour time period (Homan et al., 2012).
Government Subsidies
As Canada continues to try and find ways to reduce greenhouse gas emissions and adopt
new technologies which will aid in doing so, Agriculture and Agri-Food Canada (AAFC) has
developed the federal Agriculture Clean Technology Program. The Program prioritizes projects
which focus on the improvement of two clean technology sectors: precision-agriculture and agri-
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based bioproducts. Agri-based bioproducts are defined as renewable resources resulting from the
degradation of agricultural resources or wastes which can include animal manure and crop
residue (Government of Canada, 2019). Because the process of anaerobic digestion involves
producing methane and carbon dioxide as a result of degrading cattle manure, the provinces of
Quebec and Ontario are eligible for funding regarding the implementation of an anaerobic
digester under the Program. The Program allows applicants to apply for up to 50% of total
According to the Canadian Biogas Association (2019), resource recovery and waste
management regulations play a vital role in the safe handling and transportation of the various
products inputted and produced by the anaerobic digester. Government bodies at the federal,
provincial and municipal levels have implemented regulations in relation to resource recovery
and waste management which aim to protect public health, the environment and preserve natural
resources. These regulations generally apply to the collection and transportation of waste; limits
on the types and quantities of feedstocks inputted for processing; digestate and nutrient
management to regulate storage and application to land and the production of renewable energy.
Regulations specific to Quebec include the Environment Quality Act chapter Q-2, r.13;
Regulation Respecting Solid Waste, the Agriculture Management Regulations and the Act
Respecting Energy Transition Quebec. To summarize the objectives of these Acts, they are in
place to protect the water and soil from pollution and to promote and support energy transition.
Regulations specific to Ontario include O. Reg 267/03: Nutrient Management Act of 2002, O.
Reg 347: General Waste Management Act of EPA, O. Reg 359/09: Renewable Energy
Approvals, Ontario Water and Resources Act as well as guidelines to follow for suitable site
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selection. These Acts are in place to regulate the storing and application of nutrients on
agricultural land, regulate the inputs and processing of waste, regulate facilities producing
electricity from renewable sources and to manage the wastewater which is separated from the
digestate after processing. Acts implemented by the federal government include the Federal
Fertilizers Act which states that digestate of anaerobic digestion is designated as a fertilizer by
the Canadian Food Inspection Agency (CFIA) (Canadian Biogas Association, 2019).
Operator Training
The anaerobic digestion system consists of many moving parts and hazards which could
place someone at risk when working on the digester. For this reason, it is important for operators
to understand the risks and take the proper precautions when loading or handling the digester.
Some of the general risks associated with the digester include exposure to many colourless and
odourless gases, drowning, flammability, explosion and entry into confined spaces (Canadian
Biogas Association, 2019). Owners of anaerobic digestion facilities are highly encouraged to
seek professional advice in identifying the risks specific to their site and developing protocols to
mitigate the hazards. Some recommended formal reviews include using the Hazard and
is required in order to break even or be profitable. The initial cost of an anerobic digester can be
anywhere from hundreds of thousands of dollars to often even millions (Moser et al., 2017). On
top of that, the running costs of maintenance and repair, labour and hydro also need to be taken
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into account (Moser et al., 2017). Daily, the labour required for the average anaerobic digester
takes anywhere from half an hour to an hour and a half which includes cleaning and maintenance
(Persson et al., 2016). Based on the hourly wage of $16.00/hour of a farm worker near Toronto,
ON, it would cost approximately $6000 annually for labour for an anerobic digester
(Government of Canada, 2019). Based on Penn State University’s design for the two-phase
digester, the average daily electricity usage needed to power the multiple pumps used in the
system and lighting for the equipment room is 25 kWh/day (Persson et al. 2016). Currently, the
implementation of an anaerobic digester is only feasible on the largest farms in Quebec and
Ontario milking over 600 cows (Anderson, 2012). Table 2 below shows a general version of the
various parameters which influence the economy of the product and determine whether it should
Table 2. Various parameters influencing the initial investment cost and running costs (Wellinger,
1996).
Transportation Cost
In order to improve the adoption of anaerobic digesters by farmers, the initial and running
costs would first have to be reduced (Anderson, 2012). At this point in time, the return in
investment is not significant enough to sustain implementing an anaerobic digester on farms with
less than 600 cows. With a greater number of cows comes more manure being processed and a
higher electricity yield by the digester, thus making it feasible for large farms to be able to deal
with the high cost of electricity to run the anaerobic digester in Ontario. A 25% increase in the
saleable electricity prices to $0.249 per kWh would result in anaerobic digesters being feasible
for a 200-cow herd. Furthermore, if a carbon exchange market was to be created, it would
increase the adoption by dairy farms with 400 cows or more with the breakeven carbon credit
prices being $35.62/ton for a 400-cow farm and $1.91/ton for a 600-cow farm (Anderson, 2012).
farm, there are still negatives to the product which could be improved. In terms of an anaerobic
digesters impact on the environment, it is able to mitigate climate change by reducing the
methane and carbon dioxide emissions released into the atmosphere. If the average lactating
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dairy cow produces 62 kg of manure per day, 0.682 kg of CH₄ are being released into the
atmosphere each day per cow as a result (Statistics Canada, 2015). If an anaerobic digester was
implemented on a 600-cow farm, it would convert approximately 150 000 kg of CH₄ into a
Furthermore, the digestate extracted from the digester after the sufficient amount of
biogas has been produced is a nutrient-rich slurry which can be used as a fertilizer and applied to
land(EPA, 2017). With climate change continuing to become a more pressing issue, it is
important for the soil to be able to adapt to the changing environmental conditions such as
drought and irregular rainfalls. The digestate has the ability to improve soil health by increasing
its ability to retain water, reduce soil erosion and nutrient runoff and increase the organic matter
One of the negative impacts of anaerobic digesters is that the initial and running costs are
very high, thus limiting the implementation of the product to the largest farmers only in Ontario
and Quebec. As well as it being a capital investment, it is an added worry for the farmer which
requires additional time to look after (Green Coast, 2018). A digester can be thought of as a
massive stomach which requires at least an hour of maintenance each day. For a farmer whose
schedule is already quite busy, it could mean having to hire another person or take on the extra
responsibility.
Product Adoption
As of 2012, only 10 large farms in Ontario have implemented an anaerobic digester with
government aid which only makes up 0.28% of the total number of farms in Ontario according to
Figure 2 in Part I (Anderson, 2012). This is due to the high initial and running costs of the
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anaerobic digester which only make it feasible for farms greater than 600 cows (Anderson,
2012). Realistically, until the prices of saleable electricity produced by the digester increase and
the capital investment is reduced, the option of implementing an anaerobic digester is only
Future Studies
Currently, many studies are being done on how to make anaerobic digestion a more
efficient process that will produce more biogas per kg of volatile solids inputted into the digester.
The successful degradation of the slurry and production of biogas are heavily reliant on the
interactions between the microorganisms present (Meegoda et al., 2018). Therefore, improving
on the bacteria which are the source of the degradation process will likely improve the efficiency
of biogas production. The most important groups of bacteria present throughout the four stages
of anaerobic digestion are the Archaea, Bacteria and Eukarya communities (Castellano-Hinojosa
et al., 2018). The Bacteria community plays a role in producing the acetic acid necessary for
methane production in the methanogenic phase of the process while the Archaea community is
responsible for the production of methane by converting acetic acid to methane. Due to the
strong relationship present between the acetogenic and methanogenic bacteria throughout the
process, biomonitoring the system could give researchers insight on the most efficient
microbiome for methane production as well as predicting and preventing system failure (Amani
et al., 2010).
Aside from mitigating climate change and the digestate being an excellent source of
fertilizer which can be applied to fields, an increased adoption of anaerobic digesters would lead
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to a higher demand of construction for them. This would create more job opportunities for the
Canadian construction workers and ultimately benefit the Canadian economy (Canadian Biogas
Association, 2013). Figures 4 and 5 below demonstrate the economic benefits and job
availability for each sector which utilize anaerobic digestion. It can be analyzed that in terms of
both economic and job potential, the agriculture sector contributes the most creating an economic
spinoff of $9.3 billion and 10 200 job opportunities annually (Canadian Biogas Association,
2013).
Figure 4. Capital investment opportunity for the various sectors which utilize anaerobic digestion
systems (measured in billion dollars) (Canadian Biogas Association, 2013).
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Figure 5. Annual job potential created through implementing anaerobic digestion on a larger
scale (Canadian Biogas Association, 2013).
Recommendations
dairy farms in Quebec and Ontario where the dairy cattle populations are high in comparison to
other Canadian provinces. For the future, studies should be done on how to make anaerobic
digestion a more efficient process that would allow it to be feasible for farmers milking less than
600 dairy cows. Finding the optimal microbiome could simplify the process thus making it less
costly and ultimately mitigate climate change on a larger scale as more farmers would adopt the
product.
Conclusions
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Throughout this analysis, the process of anaerobic digestion has shown to have many
positive effects on Canada’s environment. It can mitigate climate change by capturing and
converting the biogases produced through anaerobic digestion into a source of energy instead of
allowing them to be released back into the atmosphere. Even though it is not currently feasible
for farms with less than 600 dairy cows due to the high initial investment and running costs,
studies are being done to increase the efficiency of the process by developing a microbiome
which would allow for the greatest amount of methane production. For now, the largest farms in
Canada and Quebec are able to adopt this product with the help of government subsidies and
ultimately have a positive impact on the environment through the mitigation of climate change
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